AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41790.t1 MTR_7g086510 92.600 527 18 2 10 523 118 636 0.0 949
MS.gene41790.t1 MTR_7g086610 57.955 528 187 4 10 523 112 618 0.0 595
MS.gene41790.t1 MTR_6g027660 54.409 533 197 5 10 523 124 629 0.0 570
MS.gene41790.t1 MTR_6g027630 54.231 520 201 5 10 512 123 622 0.0 566
MS.gene41790.t1 MTR_6g027630 54.231 520 201 5 10 512 38 537 0.0 566
MS.gene41790.t1 MTR_6g027650 52.975 521 207 6 10 513 116 615 0.0 554
MS.gene41790.t1 MTR_6g027680 55.346 477 172 5 10 472 126 575 0.0 527
MS.gene41790.t1 MTR_6g027630 53.333 480 187 5 10 472 123 582 1.34e-177 512
MS.gene41790.t1 MTR_6g027670 50.456 329 122 5 158 472 5 306 1.33e-103 313
MS.gene41790.t1 MTR_7g007850 34.603 315 183 3 12 309 131 439 3.95e-46 168
MS.gene41790.t1 MTR_7g007850 34.603 315 183 3 12 309 131 439 4.01e-46 169
MS.gene41790.t1 MTR_7g007850 34.603 315 183 3 12 309 131 439 1.06e-45 169
MS.gene41790.t1 MTR_7g007850 34.603 315 183 3 12 309 131 439 1.22e-45 168
MS.gene41790.t1 MTR_8g089320 34.219 301 178 4 11 298 153 446 6.42e-45 167
MS.gene41790.t1 MTR_1g111740 34.528 307 178 5 12 299 132 434 5.00e-43 161
MS.gene41790.t1 MTR_1g030660 31.579 304 182 4 11 298 148 441 1.63e-41 157
MS.gene41790.t1 MTR_8g089340 34.551 301 177 4 11 298 5 298 2.32e-40 152
MS.gene41790.t1 MTR_8g089360 33.223 301 181 3 11 298 158 451 1.90e-39 151
MS.gene41790.t1 MTR_8g089360 33.223 301 181 3 11 298 141 434 2.45e-39 151
MS.gene41790.t1 MTR_4g099270 35.906 298 175 2 21 305 1 295 1.43e-38 146
MS.gene41790.t1 MTR_4g099270 35.644 303 179 2 16 305 108 407 2.19e-38 148
MS.gene41790.t1 MTR_2g035430 28.904 301 194 4 11 298 153 446 3.19e-38 148
MS.gene41790.t1 MTR_4g099270 36.364 264 148 4 11 259 124 382 1.06e-31 126
MS.gene41790.t1 MTR_8g461380 31.457 302 185 5 11 298 160 453 9.06e-31 126
MS.gene41790.t1 MTR_4g099270 39.153 189 108 3 11 197 124 307 1.71e-23 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41790.t1 AT1G58030 60.302 529 182 5 10 523 120 635 0.0 635
MS.gene41790.t1 AT3G03720 59.583 527 170 5 10 523 104 600 0.0 624
MS.gene41790.t1 AT5G36940 57.386 528 184 5 10 523 109 609 0.0 588
MS.gene41790.t1 AT3G10600 35.275 309 174 5 12 299 138 441 1.30e-50 182
MS.gene41790.t1 AT1G05940 38.361 305 162 5 12 297 12 309 3.66e-49 176
MS.gene41790.t1 AT3G10600 35.000 300 169 5 21 299 1 295 3.76e-49 175
MS.gene41790.t1 AT1G05940 38.361 305 162 5 12 297 130 427 1.30e-48 175
MS.gene41790.t1 AT1G05940 38.361 305 162 5 12 297 130 427 2.61e-48 175
MS.gene41790.t1 AT1G05940 38.361 305 162 5 12 297 130 427 4.98e-48 175
MS.gene41790.t1 AT5G04770 33.987 306 184 4 12 300 139 443 3.52e-46 170
MS.gene41790.t1 AT5G04770 34.007 297 178 4 21 300 1 296 3.02e-45 165
MS.gene41790.t1 AT4G21120 33.660 306 183 4 11 303 1 299 2.49e-44 162
MS.gene41790.t1 AT4G21120 33.660 306 183 4 11 303 151 449 2.35e-43 162
MS.gene41790.t1 AT2G34960 28.339 307 199 4 12 305 146 444 1.55e-36 143
MS.gene41790.t1 AT5G04770 32.184 261 159 4 12 255 139 398 4.17e-35 136
MS.gene41790.t1 AT1G17120 26.948 308 205 5 11 305 162 462 2.96e-30 125

Find 137 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGTTCTTGCATTCTTTA+TGG 0.111551 7.4:-21148303 MS.gene41790:CDS
GCTGAGGAGATCGGGGTATC+AGG 0.228074 7.4:+21148954 None:intergenic
AGACAACCTACCTTCATTTC+TGG 0.247014 7.4:-21149798 MS.gene41790:CDS
TTTGCAGCCACGGGTCTTTA+TGG 0.251178 7.4:-21148423 MS.gene41790:intron
AAAGTGCAACACACCAGATT+TGG 0.264060 7.4:+21150167 None:intergenic
GATCCATTGTTGTGGCATTC+TGG 0.265812 7.4:-21148053 MS.gene41790:CDS
ACCTACTTACTAATTGATCT+TGG 0.298888 7.4:-21146229 MS.gene41790:CDS
CTTGTATCAGCAGTTATTGT+TGG 0.303825 7.4:-21149002 MS.gene41790:CDS
AAGTGCAACACACCAGATTT+GGG 0.311090 7.4:+21150168 None:intergenic
ATTATAGTTGGTGGATATCT+AGG 0.315127 7.4:-21149527 MS.gene41790:CDS
GGGTTGCTTGGTTGGTTGGC+TGG 0.321412 7.4:-21150244 MS.gene41790:CDS
TACAGACCTGGGACATCTTT+CGG 0.326858 7.4:+21146966 None:intergenic
ATAGGGATTCTCATAGTTAC+TGG 0.328158 7.4:-21147000 MS.gene41790:CDS
CCATAGCTCTTCTATGTATA+GGG 0.343695 7.4:-21147017 MS.gene41790:CDS
ATGCTATTCATTATTATAGT+TGG 0.345054 7.4:-21149539 MS.gene41790:CDS
TCAGGGTTCAACTCATAATA+TGG 0.349037 7.4:+21148972 None:intergenic
AATATAAATATTTAAAATCA+TGG 0.349443 7.4:+21150274 None:intergenic
CGTCATACCTTGCCAGGTCT+TGG 0.363463 7.4:-21149773 MS.gene41790:CDS
TAGAAAATGCTGAGGAGATC+GGG 0.372190 7.4:+21148946 None:intergenic
ACCATAGCTCTTCTATGTAT+AGG 0.377588 7.4:-21147018 MS.gene41790:CDS
GTTTCTGTGTGGTTGTTAAT+CGG 0.382667 7.4:-21146105 MS.gene41790:CDS
CTCGGGGTTGCTTGGTTGGT+TGG 0.395159 7.4:-21150248 MS.gene41790:CDS
AAGGAATCTGTGTGCGCCTA+TGG 0.398385 7.4:+21148357 None:intergenic
ATCACCCTCCTCTTGTGTCT+TGG 0.398948 7.4:-21149710 MS.gene41790:CDS
TTGATTCTTGAATACACAAT+TGG 0.404208 7.4:-21150218 MS.gene41790:CDS
TAAATATTTATATTTATCTC+GGG 0.404795 7.4:-21150265 MS.gene41790:CDS
TTAAATATTTATATTTATCT+CGG 0.409475 7.4:-21150266 MS.gene41790:CDS
TTATCTCGGGGTTGCTTGGT+TGG 0.419426 7.4:-21150252 MS.gene41790:CDS
ATGGATGTTTCTCAGTTAGC+AGG 0.419596 7.4:-21148284 MS.gene41790:CDS
CTGGCTCGTCATACCTTGCC+AGG 0.429847 7.4:-21149779 MS.gene41790:CDS
CGCGTAACATTGTTTGGAGT+GGG 0.435605 7.4:-21146807 MS.gene41790:CDS
CTTGCCAGGTCTTGGAATAG+TGG 0.435867 7.4:-21149765 MS.gene41790:CDS
CCTACTTACTAATTGATCTT+GGG 0.436245 7.4:-21146228 MS.gene41790:intron
CCTCTTGTGTCTTGGAATCA+AGG 0.440226 7.4:-21149702 MS.gene41790:CDS
CTATTCATTATTATAGTTGG+TGG 0.442304 7.4:-21149536 MS.gene41790:CDS
ATATTTATCTCGGGGTTGCT+TGG 0.442316 7.4:-21150256 MS.gene41790:CDS
GGAGTGAAAGGGATGTTTGC+TGG 0.443162 7.4:-21149367 MS.gene41790:CDS
GCAGGTAAGAATGGAACAAA+TGG 0.455904 7.4:+21146271 None:intergenic
TTAACAATGAACTGTGAGTT+CGG 0.456289 7.4:+21146058 None:intergenic
ATTTACCTCCTCGGCTGTGC+TGG 0.457172 7.4:+21149300 None:intergenic
TCGTGGCATAACCCCAAATC+TGG 0.457510 7.4:-21150180 MS.gene41790:intron
GCTGGAACGGGTACTTCATC+AGG 0.461118 7.4:+21148095 None:intergenic
TTTCTAGCTATGGGATGGAA+TGG 0.476792 7.4:-21148929 MS.gene41790:CDS
CTAGAAAATGCTGAGGAGAT+CGG 0.480682 7.4:+21148945 None:intergenic
AGCAAGATCTACGGGACTTA+CGG 0.483488 7.4:+21148007 None:intergenic
GACAGGTACATAATAACAAC+CGG 0.485204 7.4:-21148807 MS.gene41790:intron
AGTATCATCTTGCTTTATGC+AGG 0.485887 7.4:+21146749 None:intergenic
TTCAATAGTCATTACCCGCT+CGG 0.488481 7.4:+21149473 None:intergenic
GGGTCTTTATGGCAATGGCC+AGG 0.488552 7.4:-21148412 MS.gene41790:CDS
TTCTAGCTATGGGATGGAAT+GGG 0.490305 7.4:-21148928 MS.gene41790:CDS
ATGCAGGCAGCAGGTAAGAA+TGG 0.492492 7.4:+21146262 None:intergenic
TTTATTAGAATGCAGGCAGC+AGG 0.495828 7.4:+21146253 None:intergenic
AACATCCCTTTCACTCCGTA+TGG 0.496245 7.4:+21149373 None:intergenic
TGAATTTCAGGGTTGATACA+TGG 0.496642 7.4:-21146134 MS.gene41790:intron
TCAATAGTCATTACCCGCTC+GGG 0.498077 7.4:+21149474 None:intergenic
GATGATACTAGGCATACCTT+TGG 0.498232 7.4:-21146735 MS.gene41790:CDS
CATCAACGAGATTTGCCAAT+CGG 0.498467 7.4:-21149065 MS.gene41790:CDS
ACAGATGTTAGCAGTGAAGC+TGG 0.499130 7.4:+21148077 None:intergenic
GTAGGTGTTTATTAGAATGC+AGG 0.502524 7.4:+21146246 None:intergenic
GGATATCTAGGTTTCAAAAC+CGG 0.504281 7.4:-21149515 MS.gene41790:CDS
GATCTCATCAGCACGGGCCG+AGG 0.505505 7.4:+21146020 None:intergenic
GTTAGCAGTGAAGCTGGAAC+GGG 0.511872 7.4:+21148083 None:intergenic
CAAAACTGAAACTGCAACTG+TGG 0.516176 7.4:+21148136 None:intergenic
GGAGGGCAACAAACCATCCC+TGG 0.517165 7.4:+21148394 None:intergenic
TTGAAAAGCACTATTGTCAC+TGG 0.518658 7.4:-21148335 MS.gene41790:CDS
CTTATGAGTATTTACCTCCT+CGG 0.520525 7.4:+21149291 None:intergenic
GTACTTATATACTTGTTCTA+CGG 0.522148 7.4:-21146081 MS.gene41790:CDS
GCATAAAGCAAGATGATACT+AGG 0.522160 7.4:-21146746 MS.gene41790:CDS
GTGATGATATTGAGGAAGAC+AGG 0.522363 7.4:-21148031 MS.gene41790:CDS
GCCACGGGTCTTTATGGCAA+TGG 0.523542 7.4:-21148417 MS.gene41790:CDS
ATCATAAAAGAAATAACTAA+AGG 0.524620 7.4:-21147924 MS.gene41790:intron
TTTATGGCAATGGCCAGGGA+TGG 0.525127 7.4:-21148407 MS.gene41790:CDS
TTTGTGCAGCATAACTGCGC+TGG 0.525303 7.4:-21146772 MS.gene41790:CDS
AATGATTTGCTTGAGAGCGA+TGG 0.525419 7.4:+21145998 None:intergenic
CCCTATACATAGAAGAGCTA+TGG 0.531318 7.4:+21147017 None:intergenic
ATCTAGGTTTCAAAACCGGA+TGG 0.535222 7.4:-21149511 MS.gene41790:CDS
AGAATAACTAGCAAGATCTA+CGG 0.536319 7.4:+21147998 None:intergenic
CCCAAGATCAATTAGTAAGT+AGG 0.536674 7.4:+21146228 None:intergenic
AATTGTGTATTCAAGAATCA+AGG 0.537842 7.4:+21150220 None:intergenic
GAATAACTAGCAAGATCTAC+GGG 0.540758 7.4:+21147999 None:intergenic
TGTTTCTCAGTTAGCAGGGA+TGG 0.542189 7.4:-21148279 MS.gene41790:intron
TGTTAGCAGTGAAGCTGGAA+CGG 0.544774 7.4:+21148082 None:intergenic
CTGAGGAGATCGGGGTATCA+GGG 0.546753 7.4:+21148955 None:intergenic
GTATGACGAGCCAGAAATGA+AGG 0.547165 7.4:+21149788 None:intergenic
CCTCCTTCTCAGATATCCAT+AGG 0.548969 7.4:-21148373 MS.gene41790:CDS
TGGATGTTTCTCAGTTAGCA+GGG 0.549416 7.4:-21148283 MS.gene41790:CDS
AGGCATACCTTTGGACACTC+AGG 0.553150 7.4:-21146726 MS.gene41790:CDS
GGTTTCAAAACCGGATGGGT+TGG 0.553417 7.4:-21149506 MS.gene41790:CDS
TTAAAGAGCAGTGACAGCTC+CGG 0.553450 7.4:+21148788 None:intergenic
CAGGTAAGAATGGAACAAAT+GGG 0.554758 7.4:+21146272 None:intergenic
TTTGGGAATACAGGTTAGTG+TGG 0.556347 7.4:-21148177 MS.gene41790:intron
GAGCTCATAACCAACCCATC+CGG 0.559060 7.4:+21149496 None:intergenic
GCGCGTAACATTGTTTGGAG+TGG 0.560008 7.4:-21146808 MS.gene41790:CDS
CACTATTCCAAGACCTGGCA+AGG 0.565945 7.4:+21149766 None:intergenic
AAATGCAATCTATGTTCCCT+CGG 0.568189 7.4:-21146037 MS.gene41790:CDS
TTGGTTATGAGCTCCCGAGC+GGG 0.573670 7.4:-21149487 MS.gene41790:intron
ATGGATATCTGAGAAGGAGG+AGG 0.580231 7.4:+21148376 None:intergenic
AGCAACGTAGTGAGAAGACT+AGG 0.582646 7.4:-21147059 MS.gene41790:CDS
ATCTCATCAGCACGGGCCGA+GGG 0.586036 7.4:+21146021 None:intergenic
AACATTTACTGTAGTCACAA+TGG 0.593857 7.4:+21149568 None:intergenic
AATGCAGTCGATATACCGAT+TGG 0.597202 7.4:+21149050 None:intergenic
TCTAGGTTTCAAAACCGGAT+GGG 0.599497 7.4:-21149510 MS.gene41790:CDS
TTCAGTGACCAGCACAGCCG+AGG 0.600944 7.4:-21149308 MS.gene41790:CDS
GGTGCTTCAGCTGTTGCTCG+TGG 0.603604 7.4:-21150197 MS.gene41790:CDS
GAACGTCTGACTTGTCATGT+AGG 0.604181 7.4:+21147964 None:intergenic
GCATTCTGGTGATGATATTG+AGG 0.607308 7.4:-21148039 MS.gene41790:CDS
ACAATTAATACAGCTGCACA+TGG 0.608628 7.4:+21149737 None:intergenic
GGTCTTTATGGCAATGGCCA+GGG 0.608748 7.4:-21148411 MS.gene41790:CDS
ATTGATGTTCCAGAGTTCAA+CGG 0.609349 7.4:-21149597 MS.gene41790:intron
TCACCAGAATGCCACAACAA+TGG 0.614266 7.4:+21148050 None:intergenic
AGTGCAACACACCAGATTTG+GGG 0.614803 7.4:+21150169 None:intergenic
GCGATGGATCTCATCAGCAC+GGG 0.614977 7.4:+21146014 None:intergenic
AGCGATGGATCTCATCAGCA+CGG 0.615000 7.4:+21146013 None:intergenic
CTTCAGCCGAAAGATGTCCC+AGG 0.618361 7.4:-21146972 MS.gene41790:intron
GCGCCTATGGATATCTGAGA+AGG 0.619545 7.4:+21148370 None:intergenic
CTAGGAGAAAACTCGCAGCA+TGG 0.622773 7.4:-21147041 MS.gene41790:CDS
AAATATTTATATTTATCTCG+GGG 0.626463 7.4:-21150264 MS.gene41790:CDS
TCAACCACTATTCCAAGACC+TGG 0.629524 7.4:+21149761 None:intergenic
TTGGGAATACAGGTTAGTGT+GGG 0.634743 7.4:-21148176 MS.gene41790:intron
CCTATGGATATCTGAGAAGG+AGG 0.635534 7.4:+21148373 None:intergenic
TGGATATCTGAGAAGGAGGA+GGG 0.637836 7.4:+21148377 None:intergenic
CCTTGATTCCAAGACACAAG+AGG 0.642801 7.4:+21149702 None:intergenic
GATTCCAAGACACAAGAGGA+GGG 0.643734 7.4:+21149706 None:intergenic
CATACCTCCTGAGTGTCCAA+AGG 0.643801 7.4:+21146719 None:intergenic
GCCATTGCCATAAAGACCCG+TGG 0.651242 7.4:+21148416 None:intergenic
CATCTGTTGATCCATTGTTG+TGG 0.656282 7.4:-21148061 MS.gene41790:CDS
AGTGACCAGCACAGCCGAGG+AGG 0.658209 7.4:-21149305 MS.gene41790:intron
GGAACGGGTACTTCATCAGG+CGG 0.658359 7.4:+21148098 None:intergenic
AGAAAATGCTGAGGAGATCG+GGG 0.660720 7.4:+21148947 None:intergenic
TGATTCCAAGACACAAGAGG+AGG 0.661534 7.4:+21149705 None:intergenic
CCCATAGCTAGAAAATGCTG+AGG 0.671121 7.4:+21148938 None:intergenic
GAACGGGTACTTCATCAGGC+GGG 0.674449 7.4:+21148099 None:intergenic
GACGAGCCAGAAATGAAGGT+AGG 0.694492 7.4:+21149792 None:intergenic
CATACCTTTGGACACTCAGG+AGG 0.698880 7.4:-21146723 MS.gene41790:intron
GTTGGTTATGAGCTCCCGAG+CGG 0.700456 7.4:-21149488 MS.gene41790:CDS
CATGGCTAAGAGTTTCTGTG+TGG 0.734405 7.4:-21146116 MS.gene41790:CDS
CTTGTGTCTTGGAATCAAGG+AGG 0.735038 7.4:-21149699 MS.gene41790:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTAATTATGTTATTAAA+GGG - chr7.4:21149695-21149714 MS.gene41790:intron 10.0%
!! CTTTATAAATGATTAATAAT+TGG - chr7.4:21148857-21148876 MS.gene41790:intron 10.0%
!! TAAATATTTATATTTATCTC+GGG - chr7.4:21145997-21146016 MS.gene41790:CDS 10.0%
!! TAGTTTAATTATGTTATTAA+AGG - chr7.4:21149694-21149713 MS.gene41790:intron 10.0%
!! AAAAATCTTAACTAACAAAA+CGG + chr7.4:21147098-21147117 None:intergenic 15.0%
!! AAATATTTATATTTATCTCG+GGG - chr7.4:21145998-21146017 MS.gene41790:CDS 15.0%
!! AGTATAAAGAAATAAATCAA+AGG + chr7.4:21149392-21149411 None:intergenic 15.0%
!! ATCATAAAAGAAATAACTAA+AGG - chr7.4:21148338-21148357 MS.gene41790:CDS 15.0%
!!! GTTATTTCTTTTATGATTAA+AGG + chr7.4:21148335-21148354 None:intergenic 15.0%
!! AACATCAATTGAGATAAAAT+AGG + chr7.4:21146654-21146673 None:intergenic 20.0%
!! AACTTGCATATAAAAAAGAA+TGG + chr7.4:21149152-21149171 None:intergenic 20.0%
!! AATAACCTATTTGTATTGTT+AGG - chr7.4:21148739-21148758 MS.gene41790:intron 20.0%
!! AATACAAGGAATCAAAATAA+TGG + chr7.4:21149956-21149975 None:intergenic 20.0%
!! AGATGGGATATATTTAAATT+AGG - chr7.4:21148493-21148512 MS.gene41790:intron 20.0%
!! ATACAAGGAATCAAAATAAT+GGG + chr7.4:21149955-21149974 None:intergenic 20.0%
!! ATGCTATTCATTATTATAGT+TGG - chr7.4:21146723-21146742 MS.gene41790:intron 20.0%
!! GATGGGATATATTTAAATTA+GGG - chr7.4:21148494-21148513 MS.gene41790:intron 20.0%
!! TCCAACATGAATAAATATTA+CGG - chr7.4:21149751-21149770 MS.gene41790:CDS 20.0%
!! TGATAAATATATCTTTCCAT+TGG - chr7.4:21147807-21147826 MS.gene41790:intron 20.0%
!!! ATAGTTTTCTTTTCATACAT+TGG - chr7.4:21146925-21146944 MS.gene41790:intron 20.0%
!!! TAATTGTTTTCGTAACAAAT+AGG + chr7.4:21148524-21148543 None:intergenic 20.0%
!!! TTTTTATTTTGTTATTGTGC+AGG - chr7.4:21147166-21147185 MS.gene41790:intron 20.0%
! AATCTTGTCAATAAGTTCTT+TGG - chr7.4:21149103-21149122 MS.gene41790:intron 25.0%
! AATTGCTATGTTCATTACTT+TGG - chr7.4:21148067-21148086 MS.gene41790:CDS 25.0%
! AATTGTGTATTCAAGAATCA+AGG + chr7.4:21146045-21146064 None:intergenic 25.0%
! ACCGTAATATTTATTCATGT+TGG + chr7.4:21149755-21149774 None:intergenic 25.0%
! ATAAATCATCAACCAATAGA+GGG + chr7.4:21148470-21148489 None:intergenic 25.0%
! ATATTTATTCATGTTGGACT+TGG + chr7.4:21149749-21149768 None:intergenic 25.0%
! ATGAAATGGAAAAGTAATTG+AGG + chr7.4:21147572-21147591 None:intergenic 25.0%
! ATGAATAAATATTACGGTGT+CGG - chr7.4:21149757-21149776 MS.gene41790:CDS 25.0%
! ATGGTAAAAGATAACATGAA+AGG + chr7.4:21146146-21146165 None:intergenic 25.0%
! ATTCTTGTGTTTGAATTTCA+GGG - chr7.4:21150117-21150136 MS.gene41790:intron 25.0%
! ATTGCTATGTTCATTACTTT+GGG - chr7.4:21148068-21148087 MS.gene41790:CDS 25.0%
! CTATTCATTATTATAGTTGG+TGG - chr7.4:21146726-21146745 MS.gene41790:CDS 25.0%
! CTGTGGTATAAGATAAATTT+CGG + chr7.4:21146862-21146881 None:intergenic 25.0%
! GAAAGGTTAAAGTTAGAAAA+AGG + chr7.4:21146129-21146148 None:intergenic 25.0%
! GTACTTATATACTTGTTCTA+CGG - chr7.4:21150181-21150200 MS.gene41790:CDS 25.0%
! GTCTAAATAATCGATCTAAT+CGG - chr7.4:21149571-21149590 MS.gene41790:CDS 25.0%
! TAATCAAACACATGAATTCT+GGG - chr7.4:21146201-21146220 MS.gene41790:intron 25.0%
! TACAAGGAATCAAAATAATG+GGG + chr7.4:21149954-21149973 None:intergenic 25.0%
! TATTTCCGTTTAAATCATTC+AGG - chr7.4:21148689-21148708 MS.gene41790:intron 25.0%
! TCAATTATAAAGTAGCATGA+TGG + chr7.4:21146165-21146184 None:intergenic 25.0%
! TCAATTCACTTAGTTATGTA+TGG - chr7.4:21147525-21147544 MS.gene41790:intron 25.0%
! TCAATTGAGATAAAATAGGT+TGG + chr7.4:21146650-21146669 None:intergenic 25.0%
! TCTAAATAATCGATCTAATC+GGG - chr7.4:21149572-21149591 MS.gene41790:CDS 25.0%
! TCTCTGATGTTACATAATTA+TGG - chr7.4:21148916-21148935 MS.gene41790:intron 25.0%
! TTGATTCTTGAATACACAAT+TGG - chr7.4:21146044-21146063 MS.gene41790:CDS 25.0%
!! AAATCATTCCATGTTCATTT+TGG - chr7.4:21149352-21149371 MS.gene41790:CDS 25.0%
!! ATGAGGTTTGAATTTAGTTT+CGG + chr7.4:21147035-21147054 None:intergenic 25.0%
!! ATTTTGTATTTGCTTATTGC+AGG - chr7.4:21146422-21146441 MS.gene41790:intron 25.0%
!! TAGTTATTTCCAAAACAGTT+AGG + chr7.4:21147723-21147742 None:intergenic 25.0%
!!! ATAAAAAGGTGCTTAGATAT+AGG - chr7.4:21146386-21146405 MS.gene41790:intron 25.0%
!!! ATAGGTTGGTATGATAAAAT+AGG + chr7.4:21146636-21146655 None:intergenic 25.0%
!!! ATTTTGATTCCTTGTATTTC+AGG - chr7.4:21149958-21149977 MS.gene41790:intron 25.0%
!!! GTTGATGATTTATGTAAGAT+GGG - chr7.4:21148477-21148496 MS.gene41790:intron 25.0%
!!! TAAAAAGGTGCTTAGATATA+GGG - chr7.4:21146387-21146406 MS.gene41790:intron 25.0%
!!! TTGATGTTGTTTCACAAATA+TGG + chr7.4:21147129-21147148 None:intergenic 25.0%
AAACAACCTAGTAACAGATA+AGG + chr7.4:21147601-21147620 None:intergenic 30.0%
AACAACCTAGTAACAGATAA+GGG + chr7.4:21147600-21147619 None:intergenic 30.0%
AACATTTACTGTAGTCACAA+TGG + chr7.4:21146697-21146716 None:intergenic 30.0%
AAGATTGTTGTGAATACACT+AGG + chr7.4:21149914-21149933 None:intergenic 30.0%
AAGTCATGAATTGTATGACA+TGG - chr7.4:21146231-21146250 MS.gene41790:CDS 30.0%
AAGTCATGTGTAATTCATAC+TGG - chr7.4:21147009-21147028 MS.gene41790:CDS 30.0%
ACCTACTTACTAATTGATCT+TGG - chr7.4:21150033-21150052 MS.gene41790:intron 30.0%
AGAATAACTAGCAAGATCTA+CGG + chr7.4:21148267-21148286 None:intergenic 30.0%
AGCGAATATGAAATTTGGTA+TGG + chr7.4:21147691-21147710 None:intergenic 30.0%
AGGAACAAAAACAAAACAGT+AGG - chr7.4:21148573-21148592 MS.gene41790:intron 30.0%
AGGAACTAAAAAGTGATAAG+TGG - chr7.4:21149826-21149845 MS.gene41790:intron 30.0%
AGTCATGAATTGTATGACAT+GGG - chr7.4:21146232-21146251 MS.gene41790:CDS 30.0%
AGTGTATTCACAACAATCTT+TGG - chr7.4:21149914-21149933 MS.gene41790:intron 30.0%
CACAACCTAACAATACAAAT+AGG + chr7.4:21148747-21148766 None:intergenic 30.0%
CATAAATCATCAACCAATAG+AGG + chr7.4:21148471-21148490 None:intergenic 30.0%
CATTCTTGTGTTTGAATTTC+AGG - chr7.4:21150116-21150135 MS.gene41790:intron 30.0%
CCTACTTACTAATTGATCTT+GGG - chr7.4:21150034-21150053 MS.gene41790:intron 30.0%
CGAAATTTATCTTATACCAC+AGG - chr7.4:21146860-21146879 MS.gene41790:intron 30.0%
CTTCTCAACCAATTTCTAAA+GGG + chr7.4:21148965-21148984 None:intergenic 30.0%
GATGTTACATAATTATGGAC+TGG - chr7.4:21148921-21148940 MS.gene41790:intron 30.0%
GTAATCAAACACATGAATTC+TGG - chr7.4:21146200-21146219 MS.gene41790:intron 30.0%
GTCTTCCTGAATGATTTAAA+CGG + chr7.4:21148697-21148716 None:intergenic 30.0%
TCACTTAGTTATGTATGGTA+TGG - chr7.4:21147530-21147549 MS.gene41790:intron 30.0%
TCATGTGCAAGAAACAATAA+TGG + chr7.4:21147790-21147809 None:intergenic 30.0%
TCTTCTCAACCAATTTCTAA+AGG + chr7.4:21148966-21148985 None:intergenic 30.0%
TGGTTGAGAAGACTATTTAA+GGG - chr7.4:21148974-21148993 MS.gene41790:CDS 30.0%
TGTTATTATGTACCTGTCAT+GGG + chr7.4:21147453-21147472 None:intergenic 30.0%
TGTTCTTTCCAAAATGAACA+TGG + chr7.4:21149363-21149382 None:intergenic 30.0%
TTAACAATGAACTGTGAGTT+CGG + chr7.4:21150207-21150226 None:intergenic 30.0%
TTATTATCAACAAAGCTGCA+AGG - chr7.4:21149658-21149677 MS.gene41790:intron 30.0%
TTGCAAGCGAATATGAAATT+TGG + chr7.4:21147696-21147715 None:intergenic 30.0%
TTGGTTGAGAAGACTATTTA+AGG - chr7.4:21148973-21148992 MS.gene41790:CDS 30.0%
! ACCTTTTTATTAGAGGCAAA+GGG + chr7.4:21146376-21146395 None:intergenic 30.0%
! GTCTAATGATGACATTTTGT+TGG - chr7.4:21149010-21149029 MS.gene41790:CDS 30.0%
! TCTAAGCACCTTTTTATTAG+AGG + chr7.4:21146383-21146402 None:intergenic 30.0%
! TGCAATATTCCTAACTGTTT+TGG - chr7.4:21147711-21147730 MS.gene41790:intron 30.0%
! TTGTTATTATGTACCTGTCA+TGG + chr7.4:21147454-21147473 None:intergenic 30.0%
!! ATGCTTAGATGTTGGTAATT+CGG + chr7.4:21150099-21150118 None:intergenic 30.0%
!! ATGTTCATTTTGGAAAGAAC+AGG - chr7.4:21149362-21149381 MS.gene41790:CDS 30.0%
!! ATTATAGTTGGTGGATATCT+AGG - chr7.4:21146735-21146754 MS.gene41790:CDS 30.0%
!! GGTTGATGATTTATGTAAGA+TGG - chr7.4:21148476-21148495 MS.gene41790:intron 30.0%
!! TGTTCATTTTGGAAAGAACA+GGG - chr7.4:21149363-21149382 MS.gene41790:CDS 30.0%
!! TTAAATTCTTCGCTTTTGCT+TGG - chr7.4:21148645-21148664 MS.gene41790:intron 30.0%
!!! ACTTATCACTTTTTAGTTCC+TGG + chr7.4:21149827-21149846 None:intergenic 30.0%
!!! AGTTTTGTTCTACGATAACT+TGG - chr7.4:21148008-21148027 MS.gene41790:CDS 30.0%
!!! CTTATCACTTTTTAGTTCCT+GGG + chr7.4:21149826-21149845 None:intergenic 30.0%
AAACAATGAGCAAAAGCCAA+AGG - chr7.4:21149791-21149810 MS.gene41790:CDS 35.0%
AAATGCAATCTATGTTCCCT+CGG - chr7.4:21150225-21150244 MS.gene41790:CDS 35.0%
AACATCAGAGATCAGTGTAT+CGG + chr7.4:21148907-21148926 None:intergenic 35.0%
ACAATTAATACAGCTGCACA+TGG + chr7.4:21146528-21146547 None:intergenic 35.0%
ACACAAGAATGCTTAGATGT+TGG + chr7.4:21150107-21150126 None:intergenic 35.0%
ACATGCAGAATTGCAAATAC+TGG + chr7.4:21148435-21148454 None:intergenic 35.0%
ACCATAGCTCTTCTATGTAT+AGG - chr7.4:21149244-21149263 MS.gene41790:intron 35.0%
ACCCTTTGCCTCTAATAAAA+AGG - chr7.4:21146372-21146391 MS.gene41790:intron 35.0%
AGATAAGGGCAAGAATGAAA+TGG + chr7.4:21147586-21147605 None:intergenic 35.0%
AGGAGGTAAATACTCATAAG+AGG - chr7.4:21146974-21146993 MS.gene41790:CDS 35.0%
AGTAATAACACTGACAGTTC+AGG - chr7.4:21148792-21148811 MS.gene41790:intron 35.0%
AGTATCATCTTGCTTTATGC+AGG + chr7.4:21149516-21149535 None:intergenic 35.0%
AGTTATGTATGGTATGGTGA+TGG - chr7.4:21147536-21147555 MS.gene41790:intron 35.0%
ATAGGGATTCTCATAGTTAC+TGG - chr7.4:21149262-21149281 MS.gene41790:intron 35.0%
ATATAGAAGAGTCCCTCTAT+TGG - chr7.4:21148455-21148474 MS.gene41790:intron 35.0%
ATTCCTTCTCATTCAACAGT+AGG + chr7.4:21147636-21147655 None:intergenic 35.0%
ATTGATGTTCCAGAGTTCAA+CGG - chr7.4:21146665-21146684 MS.gene41790:intron 35.0%
ATTTCGGCTATATCAAGAAG+AGG + chr7.4:21146846-21146865 None:intergenic 35.0%
CAAGAAACAATAATGGTACC+AGG + chr7.4:21147783-21147802 None:intergenic 35.0%
CAAGCAAAACCTGAAATACA+AGG + chr7.4:21149970-21149989 None:intergenic 35.0%
CAGGTAAGAATGGAACAAAT+GGG + chr7.4:21149993-21150012 None:intergenic 35.0%
CAGGTTCAAAATAAGACATG+TGG - chr7.4:21148616-21148635 MS.gene41790:intron 35.0%
CCATAGCTCTTCTATGTATA+GGG - chr7.4:21149245-21149264 MS.gene41790:intron 35.0%
CCCAAGATCAATTAGTAAGT+AGG + chr7.4:21150037-21150056 None:intergenic 35.0%
CTTATGAGTATTTACCTCCT+CGG + chr7.4:21146974-21146993 None:intergenic 35.0%
CTTGTATCAGCAGTTATTGT+TGG - chr7.4:21147260-21147279 MS.gene41790:intron 35.0%
GAATAACTAGCAAGATCTAC+GGG + chr7.4:21148266-21148285 None:intergenic 35.0%
GAATGTGTGCTTGATTTATG+AGG + chr7.4:21147052-21147071 None:intergenic 35.0%
GACAGGTACATAATAACAAC+CGG - chr7.4:21147455-21147474 MS.gene41790:intron 35.0%
GCAAGAATTTCTCTTACACA+AGG - chr7.4:21148553-21148572 MS.gene41790:intron 35.0%
GCATAAAGCAAGATGATACT+AGG - chr7.4:21149516-21149535 MS.gene41790:CDS 35.0%
GGAGGTAAATACTCATAAGA+GGG - chr7.4:21146975-21146994 MS.gene41790:CDS 35.0%
GGATATCTAGGTTTCAAAAC+CGG - chr7.4:21146747-21146766 MS.gene41790:CDS 35.0%
GTAATAACACTGACAGTTCA+GGG - chr7.4:21148793-21148812 MS.gene41790:intron 35.0%
GTAGGTGTTTATTAGAATGC+AGG + chr7.4:21150019-21150038 None:intergenic 35.0%
GTTTCTGTGTGGTTGTTAAT+CGG - chr7.4:21150157-21150176 MS.gene41790:intron 35.0%
TACTTCGAAATTAGCGAAGA+TGG + chr7.4:21149330-21149349 None:intergenic 35.0%
TCAGGGTTCAACTCATAATA+TGG + chr7.4:21147293-21147312 None:intergenic 35.0%
TGATAAGTGGCATATTTGCA+GGG - chr7.4:21149839-21149858 MS.gene41790:intron 35.0%
TGCTGTTCTTGCATTCTTTA+TGG - chr7.4:21147959-21147978 MS.gene41790:CDS 35.0%
TGCTTACAAATAGGGACAAA+GGG + chr7.4:21146353-21146372 None:intergenic 35.0%
TTAAGTGTGTCGTACTAGTT+GGG + chr7.4:21146321-21146340 None:intergenic 35.0%
! ATGGTCAAATTTTACAGACC+TGG + chr7.4:21149311-21149330 None:intergenic 35.0%
! ATTTTCCATACGGAGTGAAA+GGG - chr7.4:21146884-21146903 MS.gene41790:intron 35.0%
! ATTTTGCGCGTAACATTGTT+TGG - chr7.4:21149449-21149468 MS.gene41790:intron 35.0%
! CACCTTTTTATTAGAGGCAA+AGG + chr7.4:21146377-21146396 None:intergenic 35.0%
! CATTCAGTCCCTTTAGAAAT+TGG - chr7.4:21148954-21148973 MS.gene41790:CDS 35.0%
! GTGACAATAGTGCTTTTCAA+AGG + chr7.4:21147927-21147946 None:intergenic 35.0%
! GTTCATTACTTTGGGAATAC+AGG - chr7.4:21148076-21148095 MS.gene41790:CDS 35.0%
! TACCACAGGTATTTTCCATA+CGG - chr7.4:21146874-21146893 MS.gene41790:intron 35.0%
! TATTTTCCATACGGAGTGAA+AGG - chr7.4:21146883-21146902 MS.gene41790:intron 35.0%
! TGGTCAAATTTTACAGACCT+GGG + chr7.4:21149310-21149329 None:intergenic 35.0%
!! CATTTTCTTGTTTGAAGCTG+TGG - chr7.4:21148828-21148847 MS.gene41790:intron 35.0%
!! TACTTATTTCTCCTCCCTTT+TGG - chr7.4:21149408-21149427 MS.gene41790:intron 35.0%
!! TGAATTTCAGGGTTGATACA+TGG - chr7.4:21150128-21150147 MS.gene41790:intron 35.0%
!! TGCTTAGATGTTGGTAATTC+GGG + chr7.4:21150098-21150117 None:intergenic 35.0%
!! TTGAAAAGCACTATTGTCAC+TGG - chr7.4:21147927-21147946 MS.gene41790:CDS 35.0%
!!! TTATTGCAGGCCTTGTTTTT+TGG - chr7.4:21146435-21146454 MS.gene41790:intron 35.0%
AAAGTGCAACACACCAGATT+TGG + chr7.4:21146098-21146117 None:intergenic 40.0%
AACAAAACAGTAGGATGCAG+TGG - chr7.4:21148582-21148601 MS.gene41790:intron 40.0%
AAGTGCAACACACCAGATTT+GGG + chr7.4:21146097-21146116 None:intergenic 40.0%
AATGCAGTCGATATACCGAT+TGG + chr7.4:21147215-21147234 None:intergenic 40.0%
AGACAACCTACCTTCATTTC+TGG - chr7.4:21146464-21146483 MS.gene41790:intron 40.0%
AGCTTTACTTTACCCATGAC+AGG - chr7.4:21147438-21147457 MS.gene41790:intron 40.0%
AGGATGCAGTGGAATACATA+CGG - chr7.4:21148593-21148612 MS.gene41790:intron 40.0%
ATATTTATCTCGGGGTTGCT+TGG - chr7.4:21146006-21146025 MS.gene41790:CDS 40.0%
ATCTAGGTTTCAAAACCGGA+TGG - chr7.4:21146751-21146770 MS.gene41790:CDS 40.0%
ATGGATGTTTCTCAGTTAGC+AGG - chr7.4:21147978-21147997 MS.gene41790:CDS 40.0%
CAAAACTGAAACTGCAACTG+TGG + chr7.4:21148129-21148148 None:intergenic 40.0%
CATCAACGAGATTTGCCAAT+CGG - chr7.4:21147197-21147216 MS.gene41790:intron 40.0%
CATCTGTTGATCCATTGTTG+TGG - chr7.4:21148201-21148220 MS.gene41790:intron 40.0%
CCCTATACATAGAAGAGCTA+TGG + chr7.4:21149248-21149267 None:intergenic 40.0%
CTAGAAAATGCTGAGGAGAT+CGG + chr7.4:21147320-21147339 None:intergenic 40.0%
CTTCCTACTGTTGAATGAGA+AGG - chr7.4:21147630-21147649 MS.gene41790:intron 40.0%
GAGAGCGAAAACTCTTCAAT+AGG + chr7.4:21149631-21149650 None:intergenic 40.0%
GATAAGTGGCATATTTGCAG+GGG - chr7.4:21149840-21149859 MS.gene41790:intron 40.0%
GATGATACTAGGCATACCTT+TGG - chr7.4:21149527-21149546 MS.gene41790:CDS 40.0%
GCAGGTAAGAATGGAACAAA+TGG + chr7.4:21149994-21150013 None:intergenic 40.0%
GGAATGCTATAACTGAAGTC+AGG - chr7.4:21147651-21147670 MS.gene41790:intron 40.0%
GTCTTGACCACCAAAAAACA+AGG + chr7.4:21146448-21146467 None:intergenic 40.0%
GTGATAAGTGGCATATTTGC+AGG - chr7.4:21149838-21149857 MS.gene41790:intron 40.0%
GTGATGATATTGAGGAAGAC+AGG - chr7.4:21148231-21148250 MS.gene41790:intron 40.0%
GTGCTTACAAATAGGGACAA+AGG + chr7.4:21146354-21146373 None:intergenic 40.0%
GTTAAGTGTGTCGTACTAGT+TGG + chr7.4:21146322-21146341 None:intergenic 40.0%
TAGAAAATGCTGAGGAGATC+GGG + chr7.4:21147319-21147338 None:intergenic 40.0%
TCCTGGGAATATATCACCTT+TGG + chr7.4:21149810-21149829 None:intergenic 40.0%
TCTAGGTTTCAAAACCGGAT+GGG - chr7.4:21146752-21146771 MS.gene41790:CDS 40.0%
TCTTGCCCTTATCTGTTACT+AGG - chr7.4:21147592-21147611 MS.gene41790:intron 40.0%
TGGATGTTTCTCAGTTAGCA+GGG - chr7.4:21147979-21147998 MS.gene41790:CDS 40.0%
TGTTTGTGCACATTGATACC+TGG - chr7.4:21147762-21147781 MS.gene41790:intron 40.0%
TTCAATAGTCATTACCCGCT+CGG + chr7.4:21146792-21146811 None:intergenic 40.0%
TTGGGAATACAGGTTAGTGT+GGG - chr7.4:21148086-21148105 MS.gene41790:CDS 40.0%
TTTATTAGAATGCAGGCAGC+AGG + chr7.4:21150012-21150031 None:intergenic 40.0%
TTTGGGAATACAGGTTAGTG+TGG - chr7.4:21148085-21148104 MS.gene41790:CDS 40.0%
! AAGGTGCTTAGATATAGGGA+CGG - chr7.4:21146391-21146410 MS.gene41790:intron 40.0%
! GCATTCTGGTGATGATATTG+AGG - chr7.4:21148223-21148242 MS.gene41790:intron 40.0%
! TTCTAGCTATGGGATGGAAT+GGG - chr7.4:21147334-21147353 MS.gene41790:intron 40.0%
! TTGGTAATTCGGGCAAGTAA+TGG + chr7.4:21150088-21150107 None:intergenic 40.0%
!! AATGATTTGCTTGAGAGCGA+TGG + chr7.4:21150267-21150286 None:intergenic 40.0%
!! GCAAAGGGTGCTTACAAATA+GGG + chr7.4:21146361-21146380 None:intergenic 40.0%
!! TTTCTAGCTATGGGATGGAA+TGG - chr7.4:21147333-21147352 MS.gene41790:intron 40.0%
!!! AGCATTTTCTAGCTATGGGA+TGG - chr7.4:21147328-21147347 MS.gene41790:intron 40.0%
!!! CCTCAGCATTTTCTAGCTAT+GGG - chr7.4:21147324-21147343 MS.gene41790:intron 40.0%
!!! TCCTCAGCATTTTCTAGCTA+TGG - chr7.4:21147323-21147342 MS.gene41790:intron 40.0%
AACATCCCTTTCACTCCGTA+TGG + chr7.4:21146892-21146911 None:intergenic 45.0%
ACAGATGTTAGCAGTGAAGC+TGG + chr7.4:21148188-21148207 None:intergenic 45.0%
AGAAAATGCTGAGGAGATCG+GGG + chr7.4:21147318-21147337 None:intergenic 45.0%
AGCAACGTAGTGAGAAGACT+AGG - chr7.4:21149203-21149222 MS.gene41790:intron 45.0%
AGCAAGATCTACGGGACTTA+CGG + chr7.4:21148258-21148277 None:intergenic 45.0%
AGTGCAACACACCAGATTTG+GGG + chr7.4:21146096-21146115 None:intergenic 45.0%
ATGGATATCTGAGAAGGAGG+AGG + chr7.4:21147889-21147908 None:intergenic 45.0%
CATGGCTAAGAGTTTCTGTG+TGG - chr7.4:21150146-21150165 MS.gene41790:intron 45.0%
CCCATAGCTAGAAAATGCTG+AGG + chr7.4:21147327-21147346 None:intergenic 45.0%
CCTATGGATATCTGAGAAGG+AGG + chr7.4:21147892-21147911 None:intergenic 45.0%
CCTCCTTCTCAGATATCCAT+AGG - chr7.4:21147889-21147908 MS.gene41790:intron 45.0%
CCTCTTGTGTCTTGGAATCA+AGG - chr7.4:21146560-21146579 MS.gene41790:intron 45.0%
CCTTGATTCCAAGACACAAG+AGG + chr7.4:21146563-21146582 None:intergenic 45.0%
CGTGTGCACAATCACCAAAA+GGG + chr7.4:21149425-21149444 None:intergenic 45.0%
CTCCGTATGGAAAATACCTG+TGG + chr7.4:21146879-21146898 None:intergenic 45.0%
CTTGTGTCTTGGAATCAAGG+AGG - chr7.4:21146563-21146582 MS.gene41790:intron 45.0%
GATCCATTGTTGTGGCATTC+TGG - chr7.4:21148209-21148228 MS.gene41790:intron 45.0%
GATTCCAAGACACAAGAGGA+GGG + chr7.4:21146559-21146578 None:intergenic 45.0%
GCCAAAGGTGATATATTCCC+AGG - chr7.4:21149806-21149825 MS.gene41790:CDS 45.0%
GTATGACGAGCCAGAAATGA+AGG + chr7.4:21146477-21146496 None:intergenic 45.0%
TACAGACCTGGGACATCTTT+CGG + chr7.4:21149299-21149318 None:intergenic 45.0%
TCAACCACTATTCCAAGACC+TGG + chr7.4:21146504-21146523 None:intergenic 45.0%
TCAATAGTCATTACCCGCTC+GGG + chr7.4:21146791-21146810 None:intergenic 45.0%
TCACCAGAATGCCACAACAA+TGG + chr7.4:21148215-21148234 None:intergenic 45.0%
TGATTCCAAGACACAAGAGG+AGG + chr7.4:21146560-21146579 None:intergenic 45.0%
TGCTTAGATATAGGGACGGA+AGG - chr7.4:21146395-21146414 MS.gene41790:intron 45.0%
TGGATATCTGAGAAGGAGGA+GGG + chr7.4:21147888-21147907 None:intergenic 45.0%
TGGATTGTACCGTTGAACTC+TGG + chr7.4:21146677-21146696 None:intergenic 45.0%
TGTTAGCAGTGAAGCTGGAA+CGG + chr7.4:21148183-21148202 None:intergenic 45.0%
TGTTTCTCAGTTAGCAGGGA+TGG - chr7.4:21147983-21148002 MS.gene41790:CDS 45.0%
TTAAAGAGCAGTGACAGCTC+CGG + chr7.4:21147477-21147496 None:intergenic 45.0%
! CGCGTAACATTGTTTGGAGT+GGG - chr7.4:21149455-21149474 MS.gene41790:intron 45.0%
! GAACGTCTGACTTGTCATGT+AGG + chr7.4:21148301-21148320 None:intergenic 45.0%
!! GGCAAAGGGTGCTTACAAAT+AGG + chr7.4:21146362-21146381 None:intergenic 45.0%
!!! TTGCAGGCCTTGTTTTTTGG+TGG - chr7.4:21146438-21146457 MS.gene41790:intron 45.0%
!! TTAAATATTTATATTTATCT+CGG - chr7.4:21145996-21146015 MS.gene41790:CDS 5.0%
!! TTTATAAATGATTAATAATT+GGG - chr7.4:21148858-21148877 MS.gene41790:intron 5.0%
!!! ATTAAAAAAAATGTTATTTA+AGG - chr7.4:21149721-21149740 MS.gene41790:CDS 5.0%
!!! TTAAAAAAAATGTTATTTAA+GGG - chr7.4:21149722-21149741 MS.gene41790:CDS 5.0%
AAGGAATCTGTGTGCGCCTA+TGG + chr7.4:21147908-21147927 None:intergenic 50.0%
AGCGATGGATCTCATCAGCA+CGG + chr7.4:21150252-21150271 None:intergenic 50.0%
AGGCATACCTTTGGACACTC+AGG - chr7.4:21149536-21149555 MS.gene41790:CDS 50.0%
ATCACCCTCCTCTTGTGTCT+TGG - chr7.4:21146552-21146571 MS.gene41790:intron 50.0%
ATGCAGGCAGCAGGTAAGAA+TGG + chr7.4:21150003-21150022 None:intergenic 50.0%
CACTATTCCAAGACCTGGCA+AGG + chr7.4:21146499-21146518 None:intergenic 50.0%
CATACCTCCTGAGTGTCCAA+AGG + chr7.4:21149546-21149565 None:intergenic 50.0%
CATACCTTTGGACACTCAGG+AGG - chr7.4:21149539-21149558 MS.gene41790:CDS 50.0%
CTAGGAGAAAACTCGCAGCA+TGG - chr7.4:21149221-21149240 MS.gene41790:intron 50.0%
CTGCAAAACACACGTGCCAA+TGG + chr7.4:21147826-21147845 None:intergenic 50.0%
CTTGCCAGGTCTTGGAATAG+TGG - chr7.4:21146497-21146516 MS.gene41790:intron 50.0%
GACAGTTCAGGGTGTGCATT+AGG - chr7.4:21148804-21148823 MS.gene41790:CDS 50.0%
GACGAGCCAGAAATGAAGGT+AGG + chr7.4:21146473-21146492 None:intergenic 50.0%
GAGCTCATAACCAACCCATC+CGG + chr7.4:21146769-21146788 None:intergenic 50.0%
GCGCCTATGGATATCTGAGA+AGG + chr7.4:21147895-21147914 None:intergenic 50.0%
GCGCGTAACATTGTTTGGAG+TGG - chr7.4:21149454-21149473 MS.gene41790:intron 50.0%
GCGTGTGCACAATCACCAAA+AGG + chr7.4:21149426-21149445 None:intergenic 50.0%
GGAGTGAAAGGGATGTTTGC+TGG - chr7.4:21146895-21146914 MS.gene41790:intron 50.0%
GGTCTTTATGGCAATGGCCA+GGG - chr7.4:21147851-21147870 MS.gene41790:intron 50.0%
GGTTTCAAAACCGGATGGGT+TGG - chr7.4:21146756-21146775 MS.gene41790:CDS 50.0%
GTGCACAATCACCAAAAGGG+AGG + chr7.4:21149422-21149441 None:intergenic 50.0%
GTTAGCAGTGAAGCTGGAAC+GGG + chr7.4:21148182-21148201 None:intergenic 50.0%
TCGTGGCATAACCCCAAATC+TGG - chr7.4:21146082-21146101 MS.gene41790:CDS 50.0%
TGCAGTGGAATACATACGGC+AGG - chr7.4:21148597-21148616 MS.gene41790:intron 50.0%
TTATCTCGGGGTTGCTTGGT+TGG - chr7.4:21146010-21146029 MS.gene41790:CDS 50.0%
TTTATGGCAATGGCCAGGGA+TGG - chr7.4:21147855-21147874 MS.gene41790:intron 50.0%
TTTGCAGCCACGGGTCTTTA+TGG - chr7.4:21147839-21147858 MS.gene41790:intron 50.0%
TTTGTGCAGCATAACTGCGC+TGG - chr7.4:21149490-21149509 MS.gene41790:CDS 50.0%
! GGGCAGTGTAAGGTTTGCTT+GGG - chr7.4:21147354-21147373 MS.gene41790:intron 50.0%
! TGGGCAGTGTAAGGTTTGCT+TGG - chr7.4:21147353-21147372 MS.gene41790:intron 50.0%
! TTTGGTGATTGTGCACACGC+AGG - chr7.4:21149426-21149445 MS.gene41790:intron 50.0%
ATTTACCTCCTCGGCTGTGC+TGG + chr7.4:21146965-21146984 None:intergenic 55.0%
CGTCATACCTTGCCAGGTCT+TGG - chr7.4:21146489-21146508 MS.gene41790:intron 55.0%
CTTCAGCCGAAAGATGTCCC+AGG - chr7.4:21149290-21149309 MS.gene41790:intron 55.0%
GAACGGGTACTTCATCAGGC+GGG + chr7.4:21148166-21148185 None:intergenic 55.0%
GCCACGGGTCTTTATGGCAA+TGG - chr7.4:21147845-21147864 MS.gene41790:intron 55.0%
GCCATTGCCATAAAGACCCG+TGG + chr7.4:21147849-21147868 None:intergenic 55.0%
GCGATGGATCTCATCAGCAC+GGG + chr7.4:21150251-21150270 None:intergenic 55.0%
GCTGGAACGGGTACTTCATC+AGG + chr7.4:21148170-21148189 None:intergenic 55.0%
GGAACGGGTACTTCATCAGG+CGG + chr7.4:21148167-21148186 None:intergenic 55.0%
GGGATGGAATGGGCAGTGTA+AGG - chr7.4:21147344-21147363 MS.gene41790:intron 55.0%
GGGTCTTTATGGCAATGGCC+AGG - chr7.4:21147850-21147869 MS.gene41790:intron 55.0%
GTTGGTTATGAGCTCCCGAG+CGG - chr7.4:21146774-21146793 MS.gene41790:CDS 55.0%
TTGGTTATGAGCTCCCGAGC+GGG - chr7.4:21146775-21146794 MS.gene41790:CDS 55.0%
! CACGTGTGTTTTGCAGCCAC+GGG - chr7.4:21147830-21147849 MS.gene41790:intron 55.0%
! CTGAGGAGATCGGGGTATCA+GGG + chr7.4:21147310-21147329 None:intergenic 55.0%
! GCACGTGTGTTTTGCAGCCA+CGG - chr7.4:21147829-21147848 MS.gene41790:intron 55.0%
ATCTCATCAGCACGGGCCGA+GGG + chr7.4:21150244-21150263 None:intergenic 60.0%
CTCGGGGTTGCTTGGTTGGT+TGG - chr7.4:21146014-21146033 MS.gene41790:CDS 60.0%
GGAGGGCAACAAACCATCCC+TGG + chr7.4:21147871-21147890 None:intergenic 60.0%
GGTGCTTCAGCTGTTGCTCG+TGG - chr7.4:21146065-21146084 MS.gene41790:CDS 60.0%
TTCAGTGACCAGCACAGCCG+AGG - chr7.4:21146954-21146973 MS.gene41790:intron 60.0%
! CTGGCTCGTCATACCTTGCC+AGG - chr7.4:21146483-21146502 MS.gene41790:intron 60.0%
! GCTGAGGAGATCGGGGTATC+AGG + chr7.4:21147311-21147330 None:intergenic 60.0%
! GGGTTGCTTGGTTGGTTGGC+TGG - chr7.4:21146018-21146037 MS.gene41790:CDS 60.0%
AGTGACCAGCACAGCCGAGG+AGG - chr7.4:21146957-21146976 MS.gene41790:intron 65.0%
GATCTCATCAGCACGGGCCG+AGG + chr7.4:21150245-21150264 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 21145990 21150294 21145990 ID=MS.gene41790
chr7.4 mRNA 21145990 21150294 21145990 ID=MS.gene41790.t1;Parent=MS.gene41790
chr7.4 exon 21150181 21150294 21150181 ID=MS.gene41790.t1.exon1;Parent=MS.gene41790.t1
chr7.4 CDS 21150181 21150294 21150181 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21149700 21149840 21149700 ID=MS.gene41790.t1.exon2;Parent=MS.gene41790.t1
chr7.4 CDS 21149700 21149840 21149700 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21149488 21149606 21149488 ID=MS.gene41790.t1.exon3;Parent=MS.gene41790.t1
chr7.4 CDS 21149488 21149606 21149488 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21149306 21149402 21149306 ID=MS.gene41790.t1.exon4;Parent=MS.gene41790.t1
chr7.4 CDS 21149306 21149402 21149306 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21148924 21149096 21148924 ID=MS.gene41790.t1.exon5;Parent=MS.gene41790.t1
chr7.4 CDS 21148924 21149096 21148924 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21148797 21148824 21148797 ID=MS.gene41790.t1.exon6;Parent=MS.gene41790.t1
chr7.4 CDS 21148797 21148824 21148797 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21148280 21148438 21148280 ID=MS.gene41790.t1.exon7;Parent=MS.gene41790.t1
chr7.4 CDS 21148280 21148438 21148280 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21147925 21148186 21147925 ID=MS.gene41790.t1.exon8;Parent=MS.gene41790.t1
chr7.4 CDS 21147925 21148186 21147925 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21146973 21147105 21146973 ID=MS.gene41790.t1.exon9;Parent=MS.gene41790.t1
chr7.4 CDS 21146973 21147105 21146973 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21146724 21146836 21146724 ID=MS.gene41790.t1.exon10;Parent=MS.gene41790.t1
chr7.4 CDS 21146724 21146836 21146724 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21146229 21146304 21146229 ID=MS.gene41790.t1.exon11;Parent=MS.gene41790.t1
chr7.4 CDS 21146229 21146304 21146229 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
chr7.4 exon 21145990 21146146 21145990 ID=MS.gene41790.t1.exon12;Parent=MS.gene41790.t1
chr7.4 CDS 21145990 21146146 21145990 ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1
Gene Sequence

>MS.gene41790

ATGATTTTAAATATTTATATTTATCTCGGGGTTGCTTGGTTGGTTGGCTGGTCCTTGATTCTTGAATACACAATTGGTGCTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGTGTGTTGCACTTTTTTTACTTCCTTTTTCTAACTTTAACCTTTCATGTTATCTTTTACCATCATGCTACTTTATAATTGAGAATGCGTGAAGAGAGTAATCAAACACATGAATTCTGGGTTATTAAAAGTCATGAATTGTATGACATGGGTATCTTGAATGTATTTTGATTTTTAACTCTTAGTGATGTATCTATACATACAATATATTTCATCCCAACTAGTACGACACACTTAACAATTTACTCCCTTTGTCCCTATTTGTAAGCACCCTTTGCCTCTAATAAAAAGGTGCTTAGATATAGGGACGGAAGGAGTAATTTTGTATTTGCTTATTGCAGGCCTTGTTTTTTGGTGGTCAAGACAACCTACCTTCATTTCTGGCTCGTCATACCTTGCCAGGTCTTGGAATAGTGGTTGATCCATGTGCAGCTGTATTAATTGTTCTTATCACCCTCCTCTTGTGTCTTGGAATCAAGGAGGTATGCATTTTCAATAAAACAAATACATGATCAGCATTTTTCTAATTACCTATTTTATCATACCAACCTATTTTATCTCAATTGATGTTCCAGAGTTCAACGGTACAATCCATTGTGACTACAGTAAATGTTTCTGTCATGCTATTCATTATTATAGTTGGTGGATATCTAGGTTTCAAAACCGGATGGGTTGGTTATGAGCTCCCGAGCGGGTAATGACTATTGAATTTTCATTTTCAGCTCTTCATCTATAGCATGCCTCTTCTTGATATAGCCGAAATTTATCTTATACCACAGGTATTTTCCATACGGAGTGAAAGGGATGTTTGCTGGATCTGCAATAGTTTTCTTTTCATACATTGGTTTTGATTCAGTGACCAGCACAGCCGAGGAGGTAAATACTCATAAGAGGGACTGATCTTTTAAGTCATGTGTAATTCATACTGGCCGAAACTAAATTCAAACCTCATAAATCAAGCACACATTCATTCGTGAACAATGCATTTAATACCGTTTTGTTAGTTAAGATTTTTATTTAATACCATATTTGTGAAACAACATCAAGTCTCTGTGATTTAAGTTTTTTATTTTGTTATTGTGCAGGTAAAAAATCATCAACGAGATTTGCCAATCGGTATATCGACTGCATTAGCAATATGTTGTGTTCTGTATATGCTTGTATCAGCAGTTATTGTTGGCTTAGTACCATATTATGAGTTGAACCCTGATACCCCGATCTCCTCAGCATTTTCTAGCTATGGGATGGAATGGGCAGTGTAAGGTTTGCTTGGGCACACTTATTTTATTGTTTAATCTAAATGTATGAACGTCTCTTTTTGAATGTTTCGCTTCAAGCTTTACTTTACCCATGACAGGTACATAATAACAACCGGAGCTGTCACTGCTCTTTAATAATTTATTTATATAGCATTTCTGTTGATCAATTCACTTAGTTATGTATGGTATGGTGATGGATTTCTGCAACCTCAATTACTTTTCCATTTCATTCTTGCCCTTATCTGTTACTAGGTTGTTTCATTGTCATCTTCCTACTGTTGAATGAGAAGGAATGCTATAACTGAAGTCAGGAATTGAGATTGAAACCATACCAAATTTCATATTCGCTTGCAATATTCCTAACTGTTTTGGAAATAACTATCTTAGATAGACATAGATATGTTTGTGCACATTGATACCTGGTACCATTATTGTTTCTTGCACATGATAAATATATCTTTCCATTGGCACGTGTGTTTTGCAGCCACGGGTCTTTATGGCAATGGCCAGGGATGGTTTGTTGCCCTCCTCCTTCTCAGATATCCATAGGCGCACACAGATTCCTTTGAAAAGCACTATTGTCACTGGTCTCTTTGCTGCTGTTCTTGCATTCTTTATGGATGTTTCTCAGTTAGCAGGGATGGTAAGTTTTGTTCTACGATAACTTGGTTGACGCATCTTTCTTAGATTATTCTAAACTTAAACAATTGCTATGTTCATTACTTTGGGAATACAGGTTAGTGTGGGAACATTGCTTGCGTTTACCACAGTTGCAGTTTCAGTTTTGATAATCAGATATGTCCCGCCTGATGAAGTACCCGTTCCAGCTTCACTGCTAACATCTGTTGATCCATTGTTGTGGCATTCTGGTGATGATATTGAGGAAGACAGGACCGTAAGTCCCGTAGATCTTGCTAGTTATTCTGATAATAGTCACCTACATGACAAGTCAGACGTTCTTCTTGAACATCCTTTAATCATAAAAGAAATAACTAAAGGTAATTGTTGTTTGAATCTTCTGTTCGTTTTATAGAATGAATTTTAGATAAACTTTAAAATGTCACTTTCTTCCAGTATTTGCAATTCTGCATGTATATAGAAGAGTCCCTCTATTGGTTGATGATTTATGTAAGATGGGATATATTTAAATTAGGGCTGTCCTATTTGTTACGAAAACAATTAGCAAGAAATGCAAGAATTTCTCTTACACAAGGAACAAAAACAAAACAGTAGGATGCAGTGGAATACATACGGCAGGTTCAAAATAAGACATGTGGCTGAGATTAAATTCTTCGCTTTTGCTTGGCAATGAGTCTGTAATAATAAGTATTTCCGTTTAAATCATTCAGGAAGACTAGAATTTTGAATGAAATAATGAATAACCTATTTGTATTGTTAGGTTGTGACAGTTTTGTTTTCTTAGTAAGCAGAGTAATAACACTGACAGTTCAGGGTGTGCATTAGGTCATTTTCTTGTTTGAAGCTGTGGCTAACACTTTATAAATGATTAATAATTGGGCAGTGTGTTCTTCTCATGTGATACCGATACACTGATCTCTGATGTTACATAATTATGGACTGGTTTACTTGATCATTCAGTCCCTTTAGAAATTGGTTGAGAAGACTATTTAAGGGTTGACAAAGAGCAGTCTAATGATGACATTTTGTTGGAGAATTTTTGTTGAAGTGTACACATTAACTTTGAAAAACTTTGATCTATATTTCGCACATGCTTAGTTTCAATCTTGTCAATAAGTTCTTTGGCATTCTTTGTATAACATTTGCTTCCATTCTTTTTTATATGCAAGTTCAAAAAGTTGAGTTTTGTCTTCTTTATGCAAAGCAACGTAGTGAGAAGACTAGGAGAAAACTCGCAGCATGGACCATAGCTCTTCTATGTATAGGGATTCTCATAGTTACTGGTTCAGCTTCAGCCGAAAGATGTCCCAGGTCTGTAAAATTTGACCATCTTCGCTAATTTCGAAGTATAAAATCATTCCATGTTCATTTTGGAAAGAACAGGGATTCCTTTGATTTATTTCTTTATACTTATTTCTCCTCCCTTTTGGTGATTGTGCACACGCAGGATTTTGCGCGTAACATTGTTTGGAGTGGGTGTAATTATTTTTTTGTGCAGCATAACTGCGCTGGCCTGCATAAAGCAAGATGATACTAGGCATACCTTTGGACACTCAGGAGGTATGTGCAAGTCTAAATAATCGATCTAATCGGGTTATAGAACAAATTGCAATTTTTGTAGCTAGCTCCTATTGAAGAGTTTTCGCTCTCTGTCAGCTTATTATCAACAAAGCTGCAAGGATCAAGTAAAGACTAGTTTAATTATGTTATTAAAGGGCTAATTAAAAAAAATGTTATTTAAGGGACCAAGTCCAACATGAATAAATATTACGGTGTCGGTGACTAAAACAAAACAATGAGCAAAAGCCAAAGGTGATATATTCCCAGGAACTAAAAAGTGATAAGTGGCATATTTGCAGGGGCGAAAAAGATATTTTAGTTTTAAATTTATCATCTTTACAAACTTTCAACCTAGTGTATTCACAACAATCTTTGGTTAAATCAGTCTTACCCCATTATTTTGATTCCTTGTATTTCAGGTTTTGCTTGCCCATTTGTTCCATTCTTACCTGCTGCCTGCATTCTAATAAACACCTACTTACTAATTGATCTTGGGTGAGAAATCTCTTGATGCTTCATTGTATCCATTACTTGCCCGAATTACCAACATCTAAGCATTCTTGTGTTTGAATTTCAGGGTTGATACATGGCTAAGAGTTTCTGTGTGGTTGTTAATCGGAGTACTTATATACTTGTTCTACGGCCGAACTCACAGTTCATTGTTAAATGCAATCTATGTTCCCTCGGCCCGTGCTGATGAGATCCATCGCTCTCAAGCAAATCATTTAGCCTAG

Protein sequence

>MS.gene41790.t1

MILNIYIYLGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGQDNLPSFLARHTLPGLGIVVDPCAAVLIVLITLLLCLGIKESSTVQSIVTTVNVSVMLFIIIVGGYLGFKTGWVGYELPSGYFPYGVKGMFAGSAIVFFSYIGFDSVTSTAEEVKNHQRDLPIGISTALAICCVLYMLVSAVIVGLVPYYELNPDTPISSAFSSYGMEWAVYIITTGAVTPRVFMAMARDGLLPSSFSDIHRRTQIPLKSTIVTGLFAAVLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPVPASLLTSVDPLLWHSGDDIEEDRTVSPVDLASYSDNSHLHDKSDVLLEHPLIIKEITKVEFCLLYAKQRSEKTRRKLAAWTIALLCIGILIVTGSASAERCPRILRVTLFGVGVIIFLCSITALACIKQDDTRHTFGHSGGFACPFVPFLPAACILINTYLLIDLGVDTWLRVSVWLLIGVLIYLFYGRTHSSLLNAIYVPSARADEIHRSQANHLA