Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41790.t1 | XP_003624699.1 | 92.6 | 527 | 18 | 2 | 10 | 523 | 118 | 636 | 6.30E-268 | 932.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41790.t1 | Q8W4K3 | 59.8 | 527 | 169 | 5 | 10 | 523 | 104 | 600 | 3.0e-170 | 599.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41790.t1 | Q2HVB3 | 92.6 | 527 | 18 | 2 | 10 | 523 | 118 | 636 | 4.5e-268 | 932.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene41790 | MS.gene49831 | PPI |
MS.gene41790 | MS.gene53498 | PPI |
MS.gene41790 | MS.gene53499 | PPI |
MS.gene41790 | MS.gene41795 | PPI |
MS.gene47928 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene041367 | PPI |
MS.gene41790 | MS.gene08137 | PPI |
MS.gene41790 | MS.gene00402 | PPI |
MS.gene58674 | MS.gene41790 | PPI |
MS.gene53497 | MS.gene41790 | PPI |
MS.gene021787 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene47930 | PPI |
MS.gene41790 | MS.gene47297 | PPI |
MS.gene41790 | MS.gene45219 | PPI |
MS.gene41790 | MS.gene27966 | PPI |
MS.gene042491 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene27967 | PPI |
MS.gene47931 | MS.gene41790 | PPI |
MS.gene030905 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene53496 | PPI |
MS.gene27969 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene057555 | PPI |
MS.gene41790 | MS.gene97609 | PPI |
MS.gene41790 | MS.gene073450 | PPI |
MS.gene030907 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene47929 | PPI |
MS.gene030903 | MS.gene41790 | PPI |
MS.gene41790 | MS.gene27968 | PPI |
MS.gene41790 | MS.gene030906 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41790.t1 | MTR_7g086510 | 92.600 | 527 | 18 | 2 | 10 | 523 | 118 | 636 | 0.0 | 949 |
MS.gene41790.t1 | MTR_7g086610 | 57.955 | 528 | 187 | 4 | 10 | 523 | 112 | 618 | 0.0 | 595 |
MS.gene41790.t1 | MTR_6g027660 | 54.409 | 533 | 197 | 5 | 10 | 523 | 124 | 629 | 0.0 | 570 |
MS.gene41790.t1 | MTR_6g027630 | 54.231 | 520 | 201 | 5 | 10 | 512 | 123 | 622 | 0.0 | 566 |
MS.gene41790.t1 | MTR_6g027630 | 54.231 | 520 | 201 | 5 | 10 | 512 | 38 | 537 | 0.0 | 566 |
MS.gene41790.t1 | MTR_6g027650 | 52.975 | 521 | 207 | 6 | 10 | 513 | 116 | 615 | 0.0 | 554 |
MS.gene41790.t1 | MTR_6g027680 | 55.346 | 477 | 172 | 5 | 10 | 472 | 126 | 575 | 0.0 | 527 |
MS.gene41790.t1 | MTR_6g027630 | 53.333 | 480 | 187 | 5 | 10 | 472 | 123 | 582 | 1.34e-177 | 512 |
MS.gene41790.t1 | MTR_6g027670 | 50.456 | 329 | 122 | 5 | 158 | 472 | 5 | 306 | 1.33e-103 | 313 |
MS.gene41790.t1 | MTR_7g007850 | 34.603 | 315 | 183 | 3 | 12 | 309 | 131 | 439 | 3.95e-46 | 168 |
MS.gene41790.t1 | MTR_7g007850 | 34.603 | 315 | 183 | 3 | 12 | 309 | 131 | 439 | 4.01e-46 | 169 |
MS.gene41790.t1 | MTR_7g007850 | 34.603 | 315 | 183 | 3 | 12 | 309 | 131 | 439 | 1.06e-45 | 169 |
MS.gene41790.t1 | MTR_7g007850 | 34.603 | 315 | 183 | 3 | 12 | 309 | 131 | 439 | 1.22e-45 | 168 |
MS.gene41790.t1 | MTR_8g089320 | 34.219 | 301 | 178 | 4 | 11 | 298 | 153 | 446 | 6.42e-45 | 167 |
MS.gene41790.t1 | MTR_1g111740 | 34.528 | 307 | 178 | 5 | 12 | 299 | 132 | 434 | 5.00e-43 | 161 |
MS.gene41790.t1 | MTR_1g030660 | 31.579 | 304 | 182 | 4 | 11 | 298 | 148 | 441 | 1.63e-41 | 157 |
MS.gene41790.t1 | MTR_8g089340 | 34.551 | 301 | 177 | 4 | 11 | 298 | 5 | 298 | 2.32e-40 | 152 |
MS.gene41790.t1 | MTR_8g089360 | 33.223 | 301 | 181 | 3 | 11 | 298 | 158 | 451 | 1.90e-39 | 151 |
MS.gene41790.t1 | MTR_8g089360 | 33.223 | 301 | 181 | 3 | 11 | 298 | 141 | 434 | 2.45e-39 | 151 |
MS.gene41790.t1 | MTR_4g099270 | 35.906 | 298 | 175 | 2 | 21 | 305 | 1 | 295 | 1.43e-38 | 146 |
MS.gene41790.t1 | MTR_4g099270 | 35.644 | 303 | 179 | 2 | 16 | 305 | 108 | 407 | 2.19e-38 | 148 |
MS.gene41790.t1 | MTR_2g035430 | 28.904 | 301 | 194 | 4 | 11 | 298 | 153 | 446 | 3.19e-38 | 148 |
MS.gene41790.t1 | MTR_4g099270 | 36.364 | 264 | 148 | 4 | 11 | 259 | 124 | 382 | 1.06e-31 | 126 |
MS.gene41790.t1 | MTR_8g461380 | 31.457 | 302 | 185 | 5 | 11 | 298 | 160 | 453 | 9.06e-31 | 126 |
MS.gene41790.t1 | MTR_4g099270 | 39.153 | 189 | 108 | 3 | 11 | 197 | 124 | 307 | 1.71e-23 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41790.t1 | AT1G58030 | 60.302 | 529 | 182 | 5 | 10 | 523 | 120 | 635 | 0.0 | 635 |
MS.gene41790.t1 | AT3G03720 | 59.583 | 527 | 170 | 5 | 10 | 523 | 104 | 600 | 0.0 | 624 |
MS.gene41790.t1 | AT5G36940 | 57.386 | 528 | 184 | 5 | 10 | 523 | 109 | 609 | 0.0 | 588 |
MS.gene41790.t1 | AT3G10600 | 35.275 | 309 | 174 | 5 | 12 | 299 | 138 | 441 | 1.30e-50 | 182 |
MS.gene41790.t1 | AT1G05940 | 38.361 | 305 | 162 | 5 | 12 | 297 | 12 | 309 | 3.66e-49 | 176 |
MS.gene41790.t1 | AT3G10600 | 35.000 | 300 | 169 | 5 | 21 | 299 | 1 | 295 | 3.76e-49 | 175 |
MS.gene41790.t1 | AT1G05940 | 38.361 | 305 | 162 | 5 | 12 | 297 | 130 | 427 | 1.30e-48 | 175 |
MS.gene41790.t1 | AT1G05940 | 38.361 | 305 | 162 | 5 | 12 | 297 | 130 | 427 | 2.61e-48 | 175 |
MS.gene41790.t1 | AT1G05940 | 38.361 | 305 | 162 | 5 | 12 | 297 | 130 | 427 | 4.98e-48 | 175 |
MS.gene41790.t1 | AT5G04770 | 33.987 | 306 | 184 | 4 | 12 | 300 | 139 | 443 | 3.52e-46 | 170 |
MS.gene41790.t1 | AT5G04770 | 34.007 | 297 | 178 | 4 | 21 | 300 | 1 | 296 | 3.02e-45 | 165 |
MS.gene41790.t1 | AT4G21120 | 33.660 | 306 | 183 | 4 | 11 | 303 | 1 | 299 | 2.49e-44 | 162 |
MS.gene41790.t1 | AT4G21120 | 33.660 | 306 | 183 | 4 | 11 | 303 | 151 | 449 | 2.35e-43 | 162 |
MS.gene41790.t1 | AT2G34960 | 28.339 | 307 | 199 | 4 | 12 | 305 | 146 | 444 | 1.55e-36 | 143 |
MS.gene41790.t1 | AT5G04770 | 32.184 | 261 | 159 | 4 | 12 | 255 | 139 | 398 | 4.17e-35 | 136 |
MS.gene41790.t1 | AT1G17120 | 26.948 | 308 | 205 | 5 | 11 | 305 | 162 | 462 | 2.96e-30 | 125 |
Find 137 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTGTTCTTGCATTCTTTA+TGG | 0.111551 | 7.4:-21148303 | MS.gene41790:CDS |
GCTGAGGAGATCGGGGTATC+AGG | 0.228074 | 7.4:+21148954 | None:intergenic |
AGACAACCTACCTTCATTTC+TGG | 0.247014 | 7.4:-21149798 | MS.gene41790:CDS |
TTTGCAGCCACGGGTCTTTA+TGG | 0.251178 | 7.4:-21148423 | MS.gene41790:intron |
AAAGTGCAACACACCAGATT+TGG | 0.264060 | 7.4:+21150167 | None:intergenic |
GATCCATTGTTGTGGCATTC+TGG | 0.265812 | 7.4:-21148053 | MS.gene41790:CDS |
ACCTACTTACTAATTGATCT+TGG | 0.298888 | 7.4:-21146229 | MS.gene41790:CDS |
CTTGTATCAGCAGTTATTGT+TGG | 0.303825 | 7.4:-21149002 | MS.gene41790:CDS |
AAGTGCAACACACCAGATTT+GGG | 0.311090 | 7.4:+21150168 | None:intergenic |
ATTATAGTTGGTGGATATCT+AGG | 0.315127 | 7.4:-21149527 | MS.gene41790:CDS |
GGGTTGCTTGGTTGGTTGGC+TGG | 0.321412 | 7.4:-21150244 | MS.gene41790:CDS |
TACAGACCTGGGACATCTTT+CGG | 0.326858 | 7.4:+21146966 | None:intergenic |
ATAGGGATTCTCATAGTTAC+TGG | 0.328158 | 7.4:-21147000 | MS.gene41790:CDS |
CCATAGCTCTTCTATGTATA+GGG | 0.343695 | 7.4:-21147017 | MS.gene41790:CDS |
ATGCTATTCATTATTATAGT+TGG | 0.345054 | 7.4:-21149539 | MS.gene41790:CDS |
TCAGGGTTCAACTCATAATA+TGG | 0.349037 | 7.4:+21148972 | None:intergenic |
AATATAAATATTTAAAATCA+TGG | 0.349443 | 7.4:+21150274 | None:intergenic |
CGTCATACCTTGCCAGGTCT+TGG | 0.363463 | 7.4:-21149773 | MS.gene41790:CDS |
TAGAAAATGCTGAGGAGATC+GGG | 0.372190 | 7.4:+21148946 | None:intergenic |
ACCATAGCTCTTCTATGTAT+AGG | 0.377588 | 7.4:-21147018 | MS.gene41790:CDS |
GTTTCTGTGTGGTTGTTAAT+CGG | 0.382667 | 7.4:-21146105 | MS.gene41790:CDS |
CTCGGGGTTGCTTGGTTGGT+TGG | 0.395159 | 7.4:-21150248 | MS.gene41790:CDS |
AAGGAATCTGTGTGCGCCTA+TGG | 0.398385 | 7.4:+21148357 | None:intergenic |
ATCACCCTCCTCTTGTGTCT+TGG | 0.398948 | 7.4:-21149710 | MS.gene41790:CDS |
TTGATTCTTGAATACACAAT+TGG | 0.404208 | 7.4:-21150218 | MS.gene41790:CDS |
TAAATATTTATATTTATCTC+GGG | 0.404795 | 7.4:-21150265 | MS.gene41790:CDS |
TTAAATATTTATATTTATCT+CGG | 0.409475 | 7.4:-21150266 | MS.gene41790:CDS |
TTATCTCGGGGTTGCTTGGT+TGG | 0.419426 | 7.4:-21150252 | MS.gene41790:CDS |
ATGGATGTTTCTCAGTTAGC+AGG | 0.419596 | 7.4:-21148284 | MS.gene41790:CDS |
CTGGCTCGTCATACCTTGCC+AGG | 0.429847 | 7.4:-21149779 | MS.gene41790:CDS |
CGCGTAACATTGTTTGGAGT+GGG | 0.435605 | 7.4:-21146807 | MS.gene41790:CDS |
CTTGCCAGGTCTTGGAATAG+TGG | 0.435867 | 7.4:-21149765 | MS.gene41790:CDS |
CCTACTTACTAATTGATCTT+GGG | 0.436245 | 7.4:-21146228 | MS.gene41790:intron |
CCTCTTGTGTCTTGGAATCA+AGG | 0.440226 | 7.4:-21149702 | MS.gene41790:CDS |
CTATTCATTATTATAGTTGG+TGG | 0.442304 | 7.4:-21149536 | MS.gene41790:CDS |
ATATTTATCTCGGGGTTGCT+TGG | 0.442316 | 7.4:-21150256 | MS.gene41790:CDS |
GGAGTGAAAGGGATGTTTGC+TGG | 0.443162 | 7.4:-21149367 | MS.gene41790:CDS |
GCAGGTAAGAATGGAACAAA+TGG | 0.455904 | 7.4:+21146271 | None:intergenic |
TTAACAATGAACTGTGAGTT+CGG | 0.456289 | 7.4:+21146058 | None:intergenic |
ATTTACCTCCTCGGCTGTGC+TGG | 0.457172 | 7.4:+21149300 | None:intergenic |
TCGTGGCATAACCCCAAATC+TGG | 0.457510 | 7.4:-21150180 | MS.gene41790:intron |
GCTGGAACGGGTACTTCATC+AGG | 0.461118 | 7.4:+21148095 | None:intergenic |
TTTCTAGCTATGGGATGGAA+TGG | 0.476792 | 7.4:-21148929 | MS.gene41790:CDS |
CTAGAAAATGCTGAGGAGAT+CGG | 0.480682 | 7.4:+21148945 | None:intergenic |
AGCAAGATCTACGGGACTTA+CGG | 0.483488 | 7.4:+21148007 | None:intergenic |
GACAGGTACATAATAACAAC+CGG | 0.485204 | 7.4:-21148807 | MS.gene41790:intron |
AGTATCATCTTGCTTTATGC+AGG | 0.485887 | 7.4:+21146749 | None:intergenic |
TTCAATAGTCATTACCCGCT+CGG | 0.488481 | 7.4:+21149473 | None:intergenic |
GGGTCTTTATGGCAATGGCC+AGG | 0.488552 | 7.4:-21148412 | MS.gene41790:CDS |
TTCTAGCTATGGGATGGAAT+GGG | 0.490305 | 7.4:-21148928 | MS.gene41790:CDS |
ATGCAGGCAGCAGGTAAGAA+TGG | 0.492492 | 7.4:+21146262 | None:intergenic |
TTTATTAGAATGCAGGCAGC+AGG | 0.495828 | 7.4:+21146253 | None:intergenic |
AACATCCCTTTCACTCCGTA+TGG | 0.496245 | 7.4:+21149373 | None:intergenic |
TGAATTTCAGGGTTGATACA+TGG | 0.496642 | 7.4:-21146134 | MS.gene41790:intron |
TCAATAGTCATTACCCGCTC+GGG | 0.498077 | 7.4:+21149474 | None:intergenic |
GATGATACTAGGCATACCTT+TGG | 0.498232 | 7.4:-21146735 | MS.gene41790:CDS |
CATCAACGAGATTTGCCAAT+CGG | 0.498467 | 7.4:-21149065 | MS.gene41790:CDS |
ACAGATGTTAGCAGTGAAGC+TGG | 0.499130 | 7.4:+21148077 | None:intergenic |
GTAGGTGTTTATTAGAATGC+AGG | 0.502524 | 7.4:+21146246 | None:intergenic |
GGATATCTAGGTTTCAAAAC+CGG | 0.504281 | 7.4:-21149515 | MS.gene41790:CDS |
GATCTCATCAGCACGGGCCG+AGG | 0.505505 | 7.4:+21146020 | None:intergenic |
GTTAGCAGTGAAGCTGGAAC+GGG | 0.511872 | 7.4:+21148083 | None:intergenic |
CAAAACTGAAACTGCAACTG+TGG | 0.516176 | 7.4:+21148136 | None:intergenic |
GGAGGGCAACAAACCATCCC+TGG | 0.517165 | 7.4:+21148394 | None:intergenic |
TTGAAAAGCACTATTGTCAC+TGG | 0.518658 | 7.4:-21148335 | MS.gene41790:CDS |
CTTATGAGTATTTACCTCCT+CGG | 0.520525 | 7.4:+21149291 | None:intergenic |
GTACTTATATACTTGTTCTA+CGG | 0.522148 | 7.4:-21146081 | MS.gene41790:CDS |
GCATAAAGCAAGATGATACT+AGG | 0.522160 | 7.4:-21146746 | MS.gene41790:CDS |
GTGATGATATTGAGGAAGAC+AGG | 0.522363 | 7.4:-21148031 | MS.gene41790:CDS |
GCCACGGGTCTTTATGGCAA+TGG | 0.523542 | 7.4:-21148417 | MS.gene41790:CDS |
ATCATAAAAGAAATAACTAA+AGG | 0.524620 | 7.4:-21147924 | MS.gene41790:intron |
TTTATGGCAATGGCCAGGGA+TGG | 0.525127 | 7.4:-21148407 | MS.gene41790:CDS |
TTTGTGCAGCATAACTGCGC+TGG | 0.525303 | 7.4:-21146772 | MS.gene41790:CDS |
AATGATTTGCTTGAGAGCGA+TGG | 0.525419 | 7.4:+21145998 | None:intergenic |
CCCTATACATAGAAGAGCTA+TGG | 0.531318 | 7.4:+21147017 | None:intergenic |
ATCTAGGTTTCAAAACCGGA+TGG | 0.535222 | 7.4:-21149511 | MS.gene41790:CDS |
AGAATAACTAGCAAGATCTA+CGG | 0.536319 | 7.4:+21147998 | None:intergenic |
CCCAAGATCAATTAGTAAGT+AGG | 0.536674 | 7.4:+21146228 | None:intergenic |
AATTGTGTATTCAAGAATCA+AGG | 0.537842 | 7.4:+21150220 | None:intergenic |
GAATAACTAGCAAGATCTAC+GGG | 0.540758 | 7.4:+21147999 | None:intergenic |
TGTTTCTCAGTTAGCAGGGA+TGG | 0.542189 | 7.4:-21148279 | MS.gene41790:intron |
TGTTAGCAGTGAAGCTGGAA+CGG | 0.544774 | 7.4:+21148082 | None:intergenic |
CTGAGGAGATCGGGGTATCA+GGG | 0.546753 | 7.4:+21148955 | None:intergenic |
GTATGACGAGCCAGAAATGA+AGG | 0.547165 | 7.4:+21149788 | None:intergenic |
CCTCCTTCTCAGATATCCAT+AGG | 0.548969 | 7.4:-21148373 | MS.gene41790:CDS |
TGGATGTTTCTCAGTTAGCA+GGG | 0.549416 | 7.4:-21148283 | MS.gene41790:CDS |
AGGCATACCTTTGGACACTC+AGG | 0.553150 | 7.4:-21146726 | MS.gene41790:CDS |
GGTTTCAAAACCGGATGGGT+TGG | 0.553417 | 7.4:-21149506 | MS.gene41790:CDS |
TTAAAGAGCAGTGACAGCTC+CGG | 0.553450 | 7.4:+21148788 | None:intergenic |
CAGGTAAGAATGGAACAAAT+GGG | 0.554758 | 7.4:+21146272 | None:intergenic |
TTTGGGAATACAGGTTAGTG+TGG | 0.556347 | 7.4:-21148177 | MS.gene41790:intron |
GAGCTCATAACCAACCCATC+CGG | 0.559060 | 7.4:+21149496 | None:intergenic |
GCGCGTAACATTGTTTGGAG+TGG | 0.560008 | 7.4:-21146808 | MS.gene41790:CDS |
CACTATTCCAAGACCTGGCA+AGG | 0.565945 | 7.4:+21149766 | None:intergenic |
AAATGCAATCTATGTTCCCT+CGG | 0.568189 | 7.4:-21146037 | MS.gene41790:CDS |
TTGGTTATGAGCTCCCGAGC+GGG | 0.573670 | 7.4:-21149487 | MS.gene41790:intron |
ATGGATATCTGAGAAGGAGG+AGG | 0.580231 | 7.4:+21148376 | None:intergenic |
AGCAACGTAGTGAGAAGACT+AGG | 0.582646 | 7.4:-21147059 | MS.gene41790:CDS |
ATCTCATCAGCACGGGCCGA+GGG | 0.586036 | 7.4:+21146021 | None:intergenic |
AACATTTACTGTAGTCACAA+TGG | 0.593857 | 7.4:+21149568 | None:intergenic |
AATGCAGTCGATATACCGAT+TGG | 0.597202 | 7.4:+21149050 | None:intergenic |
TCTAGGTTTCAAAACCGGAT+GGG | 0.599497 | 7.4:-21149510 | MS.gene41790:CDS |
TTCAGTGACCAGCACAGCCG+AGG | 0.600944 | 7.4:-21149308 | MS.gene41790:CDS |
GGTGCTTCAGCTGTTGCTCG+TGG | 0.603604 | 7.4:-21150197 | MS.gene41790:CDS |
GAACGTCTGACTTGTCATGT+AGG | 0.604181 | 7.4:+21147964 | None:intergenic |
GCATTCTGGTGATGATATTG+AGG | 0.607308 | 7.4:-21148039 | MS.gene41790:CDS |
ACAATTAATACAGCTGCACA+TGG | 0.608628 | 7.4:+21149737 | None:intergenic |
GGTCTTTATGGCAATGGCCA+GGG | 0.608748 | 7.4:-21148411 | MS.gene41790:CDS |
ATTGATGTTCCAGAGTTCAA+CGG | 0.609349 | 7.4:-21149597 | MS.gene41790:intron |
TCACCAGAATGCCACAACAA+TGG | 0.614266 | 7.4:+21148050 | None:intergenic |
AGTGCAACACACCAGATTTG+GGG | 0.614803 | 7.4:+21150169 | None:intergenic |
GCGATGGATCTCATCAGCAC+GGG | 0.614977 | 7.4:+21146014 | None:intergenic |
AGCGATGGATCTCATCAGCA+CGG | 0.615000 | 7.4:+21146013 | None:intergenic |
CTTCAGCCGAAAGATGTCCC+AGG | 0.618361 | 7.4:-21146972 | MS.gene41790:intron |
GCGCCTATGGATATCTGAGA+AGG | 0.619545 | 7.4:+21148370 | None:intergenic |
CTAGGAGAAAACTCGCAGCA+TGG | 0.622773 | 7.4:-21147041 | MS.gene41790:CDS |
AAATATTTATATTTATCTCG+GGG | 0.626463 | 7.4:-21150264 | MS.gene41790:CDS |
TCAACCACTATTCCAAGACC+TGG | 0.629524 | 7.4:+21149761 | None:intergenic |
TTGGGAATACAGGTTAGTGT+GGG | 0.634743 | 7.4:-21148176 | MS.gene41790:intron |
CCTATGGATATCTGAGAAGG+AGG | 0.635534 | 7.4:+21148373 | None:intergenic |
TGGATATCTGAGAAGGAGGA+GGG | 0.637836 | 7.4:+21148377 | None:intergenic |
CCTTGATTCCAAGACACAAG+AGG | 0.642801 | 7.4:+21149702 | None:intergenic |
GATTCCAAGACACAAGAGGA+GGG | 0.643734 | 7.4:+21149706 | None:intergenic |
CATACCTCCTGAGTGTCCAA+AGG | 0.643801 | 7.4:+21146719 | None:intergenic |
GCCATTGCCATAAAGACCCG+TGG | 0.651242 | 7.4:+21148416 | None:intergenic |
CATCTGTTGATCCATTGTTG+TGG | 0.656282 | 7.4:-21148061 | MS.gene41790:CDS |
AGTGACCAGCACAGCCGAGG+AGG | 0.658209 | 7.4:-21149305 | MS.gene41790:intron |
GGAACGGGTACTTCATCAGG+CGG | 0.658359 | 7.4:+21148098 | None:intergenic |
AGAAAATGCTGAGGAGATCG+GGG | 0.660720 | 7.4:+21148947 | None:intergenic |
TGATTCCAAGACACAAGAGG+AGG | 0.661534 | 7.4:+21149705 | None:intergenic |
CCCATAGCTAGAAAATGCTG+AGG | 0.671121 | 7.4:+21148938 | None:intergenic |
GAACGGGTACTTCATCAGGC+GGG | 0.674449 | 7.4:+21148099 | None:intergenic |
GACGAGCCAGAAATGAAGGT+AGG | 0.694492 | 7.4:+21149792 | None:intergenic |
CATACCTTTGGACACTCAGG+AGG | 0.698880 | 7.4:-21146723 | MS.gene41790:intron |
GTTGGTTATGAGCTCCCGAG+CGG | 0.700456 | 7.4:-21149488 | MS.gene41790:CDS |
CATGGCTAAGAGTTTCTGTG+TGG | 0.734405 | 7.4:-21146116 | MS.gene41790:CDS |
CTTGTGTCTTGGAATCAAGG+AGG | 0.735038 | 7.4:-21149699 | MS.gene41790:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTTTAATTATGTTATTAAA+GGG | - | chr7.4:21149695-21149714 | MS.gene41790:intron | 10.0% |
!! | CTTTATAAATGATTAATAAT+TGG | - | chr7.4:21148857-21148876 | MS.gene41790:intron | 10.0% |
!! | TAAATATTTATATTTATCTC+GGG | - | chr7.4:21145997-21146016 | MS.gene41790:CDS | 10.0% |
!! | TAGTTTAATTATGTTATTAA+AGG | - | chr7.4:21149694-21149713 | MS.gene41790:intron | 10.0% |
!! | AAAAATCTTAACTAACAAAA+CGG | + | chr7.4:21147098-21147117 | None:intergenic | 15.0% |
!! | AAATATTTATATTTATCTCG+GGG | - | chr7.4:21145998-21146017 | MS.gene41790:CDS | 15.0% |
!! | AGTATAAAGAAATAAATCAA+AGG | + | chr7.4:21149392-21149411 | None:intergenic | 15.0% |
!! | ATCATAAAAGAAATAACTAA+AGG | - | chr7.4:21148338-21148357 | MS.gene41790:CDS | 15.0% |
!!! | GTTATTTCTTTTATGATTAA+AGG | + | chr7.4:21148335-21148354 | None:intergenic | 15.0% |
!! | AACATCAATTGAGATAAAAT+AGG | + | chr7.4:21146654-21146673 | None:intergenic | 20.0% |
!! | AACTTGCATATAAAAAAGAA+TGG | + | chr7.4:21149152-21149171 | None:intergenic | 20.0% |
!! | AATAACCTATTTGTATTGTT+AGG | - | chr7.4:21148739-21148758 | MS.gene41790:intron | 20.0% |
!! | AATACAAGGAATCAAAATAA+TGG | + | chr7.4:21149956-21149975 | None:intergenic | 20.0% |
!! | AGATGGGATATATTTAAATT+AGG | - | chr7.4:21148493-21148512 | MS.gene41790:intron | 20.0% |
!! | ATACAAGGAATCAAAATAAT+GGG | + | chr7.4:21149955-21149974 | None:intergenic | 20.0% |
!! | ATGCTATTCATTATTATAGT+TGG | - | chr7.4:21146723-21146742 | MS.gene41790:intron | 20.0% |
!! | GATGGGATATATTTAAATTA+GGG | - | chr7.4:21148494-21148513 | MS.gene41790:intron | 20.0% |
!! | TCCAACATGAATAAATATTA+CGG | - | chr7.4:21149751-21149770 | MS.gene41790:CDS | 20.0% |
!! | TGATAAATATATCTTTCCAT+TGG | - | chr7.4:21147807-21147826 | MS.gene41790:intron | 20.0% |
!!! | ATAGTTTTCTTTTCATACAT+TGG | - | chr7.4:21146925-21146944 | MS.gene41790:intron | 20.0% |
!!! | TAATTGTTTTCGTAACAAAT+AGG | + | chr7.4:21148524-21148543 | None:intergenic | 20.0% |
!!! | TTTTTATTTTGTTATTGTGC+AGG | - | chr7.4:21147166-21147185 | MS.gene41790:intron | 20.0% |
! | AATCTTGTCAATAAGTTCTT+TGG | - | chr7.4:21149103-21149122 | MS.gene41790:intron | 25.0% |
! | AATTGCTATGTTCATTACTT+TGG | - | chr7.4:21148067-21148086 | MS.gene41790:CDS | 25.0% |
! | AATTGTGTATTCAAGAATCA+AGG | + | chr7.4:21146045-21146064 | None:intergenic | 25.0% |
! | ACCGTAATATTTATTCATGT+TGG | + | chr7.4:21149755-21149774 | None:intergenic | 25.0% |
! | ATAAATCATCAACCAATAGA+GGG | + | chr7.4:21148470-21148489 | None:intergenic | 25.0% |
! | ATATTTATTCATGTTGGACT+TGG | + | chr7.4:21149749-21149768 | None:intergenic | 25.0% |
! | ATGAAATGGAAAAGTAATTG+AGG | + | chr7.4:21147572-21147591 | None:intergenic | 25.0% |
! | ATGAATAAATATTACGGTGT+CGG | - | chr7.4:21149757-21149776 | MS.gene41790:CDS | 25.0% |
! | ATGGTAAAAGATAACATGAA+AGG | + | chr7.4:21146146-21146165 | None:intergenic | 25.0% |
! | ATTCTTGTGTTTGAATTTCA+GGG | - | chr7.4:21150117-21150136 | MS.gene41790:intron | 25.0% |
! | ATTGCTATGTTCATTACTTT+GGG | - | chr7.4:21148068-21148087 | MS.gene41790:CDS | 25.0% |
! | CTATTCATTATTATAGTTGG+TGG | - | chr7.4:21146726-21146745 | MS.gene41790:CDS | 25.0% |
! | CTGTGGTATAAGATAAATTT+CGG | + | chr7.4:21146862-21146881 | None:intergenic | 25.0% |
! | GAAAGGTTAAAGTTAGAAAA+AGG | + | chr7.4:21146129-21146148 | None:intergenic | 25.0% |
! | GTACTTATATACTTGTTCTA+CGG | - | chr7.4:21150181-21150200 | MS.gene41790:CDS | 25.0% |
! | GTCTAAATAATCGATCTAAT+CGG | - | chr7.4:21149571-21149590 | MS.gene41790:CDS | 25.0% |
! | TAATCAAACACATGAATTCT+GGG | - | chr7.4:21146201-21146220 | MS.gene41790:intron | 25.0% |
! | TACAAGGAATCAAAATAATG+GGG | + | chr7.4:21149954-21149973 | None:intergenic | 25.0% |
! | TATTTCCGTTTAAATCATTC+AGG | - | chr7.4:21148689-21148708 | MS.gene41790:intron | 25.0% |
! | TCAATTATAAAGTAGCATGA+TGG | + | chr7.4:21146165-21146184 | None:intergenic | 25.0% |
! | TCAATTCACTTAGTTATGTA+TGG | - | chr7.4:21147525-21147544 | MS.gene41790:intron | 25.0% |
! | TCAATTGAGATAAAATAGGT+TGG | + | chr7.4:21146650-21146669 | None:intergenic | 25.0% |
! | TCTAAATAATCGATCTAATC+GGG | - | chr7.4:21149572-21149591 | MS.gene41790:CDS | 25.0% |
! | TCTCTGATGTTACATAATTA+TGG | - | chr7.4:21148916-21148935 | MS.gene41790:intron | 25.0% |
! | TTGATTCTTGAATACACAAT+TGG | - | chr7.4:21146044-21146063 | MS.gene41790:CDS | 25.0% |
!! | AAATCATTCCATGTTCATTT+TGG | - | chr7.4:21149352-21149371 | MS.gene41790:CDS | 25.0% |
!! | ATGAGGTTTGAATTTAGTTT+CGG | + | chr7.4:21147035-21147054 | None:intergenic | 25.0% |
!! | ATTTTGTATTTGCTTATTGC+AGG | - | chr7.4:21146422-21146441 | MS.gene41790:intron | 25.0% |
!! | TAGTTATTTCCAAAACAGTT+AGG | + | chr7.4:21147723-21147742 | None:intergenic | 25.0% |
!!! | ATAAAAAGGTGCTTAGATAT+AGG | - | chr7.4:21146386-21146405 | MS.gene41790:intron | 25.0% |
!!! | ATAGGTTGGTATGATAAAAT+AGG | + | chr7.4:21146636-21146655 | None:intergenic | 25.0% |
!!! | ATTTTGATTCCTTGTATTTC+AGG | - | chr7.4:21149958-21149977 | MS.gene41790:intron | 25.0% |
!!! | GTTGATGATTTATGTAAGAT+GGG | - | chr7.4:21148477-21148496 | MS.gene41790:intron | 25.0% |
!!! | TAAAAAGGTGCTTAGATATA+GGG | - | chr7.4:21146387-21146406 | MS.gene41790:intron | 25.0% |
!!! | TTGATGTTGTTTCACAAATA+TGG | + | chr7.4:21147129-21147148 | None:intergenic | 25.0% |
AAACAACCTAGTAACAGATA+AGG | + | chr7.4:21147601-21147620 | None:intergenic | 30.0% | |
AACAACCTAGTAACAGATAA+GGG | + | chr7.4:21147600-21147619 | None:intergenic | 30.0% | |
AACATTTACTGTAGTCACAA+TGG | + | chr7.4:21146697-21146716 | None:intergenic | 30.0% | |
AAGATTGTTGTGAATACACT+AGG | + | chr7.4:21149914-21149933 | None:intergenic | 30.0% | |
AAGTCATGAATTGTATGACA+TGG | - | chr7.4:21146231-21146250 | MS.gene41790:CDS | 30.0% | |
AAGTCATGTGTAATTCATAC+TGG | - | chr7.4:21147009-21147028 | MS.gene41790:CDS | 30.0% | |
ACCTACTTACTAATTGATCT+TGG | - | chr7.4:21150033-21150052 | MS.gene41790:intron | 30.0% | |
AGAATAACTAGCAAGATCTA+CGG | + | chr7.4:21148267-21148286 | None:intergenic | 30.0% | |
AGCGAATATGAAATTTGGTA+TGG | + | chr7.4:21147691-21147710 | None:intergenic | 30.0% | |
AGGAACAAAAACAAAACAGT+AGG | - | chr7.4:21148573-21148592 | MS.gene41790:intron | 30.0% | |
AGGAACTAAAAAGTGATAAG+TGG | - | chr7.4:21149826-21149845 | MS.gene41790:intron | 30.0% | |
AGTCATGAATTGTATGACAT+GGG | - | chr7.4:21146232-21146251 | MS.gene41790:CDS | 30.0% | |
AGTGTATTCACAACAATCTT+TGG | - | chr7.4:21149914-21149933 | MS.gene41790:intron | 30.0% | |
CACAACCTAACAATACAAAT+AGG | + | chr7.4:21148747-21148766 | None:intergenic | 30.0% | |
CATAAATCATCAACCAATAG+AGG | + | chr7.4:21148471-21148490 | None:intergenic | 30.0% | |
CATTCTTGTGTTTGAATTTC+AGG | - | chr7.4:21150116-21150135 | MS.gene41790:intron | 30.0% | |
CCTACTTACTAATTGATCTT+GGG | - | chr7.4:21150034-21150053 | MS.gene41790:intron | 30.0% | |
CGAAATTTATCTTATACCAC+AGG | - | chr7.4:21146860-21146879 | MS.gene41790:intron | 30.0% | |
CTTCTCAACCAATTTCTAAA+GGG | + | chr7.4:21148965-21148984 | None:intergenic | 30.0% | |
GATGTTACATAATTATGGAC+TGG | - | chr7.4:21148921-21148940 | MS.gene41790:intron | 30.0% | |
GTAATCAAACACATGAATTC+TGG | - | chr7.4:21146200-21146219 | MS.gene41790:intron | 30.0% | |
GTCTTCCTGAATGATTTAAA+CGG | + | chr7.4:21148697-21148716 | None:intergenic | 30.0% | |
TCACTTAGTTATGTATGGTA+TGG | - | chr7.4:21147530-21147549 | MS.gene41790:intron | 30.0% | |
TCATGTGCAAGAAACAATAA+TGG | + | chr7.4:21147790-21147809 | None:intergenic | 30.0% | |
TCTTCTCAACCAATTTCTAA+AGG | + | chr7.4:21148966-21148985 | None:intergenic | 30.0% | |
TGGTTGAGAAGACTATTTAA+GGG | - | chr7.4:21148974-21148993 | MS.gene41790:CDS | 30.0% | |
TGTTATTATGTACCTGTCAT+GGG | + | chr7.4:21147453-21147472 | None:intergenic | 30.0% | |
TGTTCTTTCCAAAATGAACA+TGG | + | chr7.4:21149363-21149382 | None:intergenic | 30.0% | |
TTAACAATGAACTGTGAGTT+CGG | + | chr7.4:21150207-21150226 | None:intergenic | 30.0% | |
TTATTATCAACAAAGCTGCA+AGG | - | chr7.4:21149658-21149677 | MS.gene41790:intron | 30.0% | |
TTGCAAGCGAATATGAAATT+TGG | + | chr7.4:21147696-21147715 | None:intergenic | 30.0% | |
TTGGTTGAGAAGACTATTTA+AGG | - | chr7.4:21148973-21148992 | MS.gene41790:CDS | 30.0% | |
! | ACCTTTTTATTAGAGGCAAA+GGG | + | chr7.4:21146376-21146395 | None:intergenic | 30.0% |
! | GTCTAATGATGACATTTTGT+TGG | - | chr7.4:21149010-21149029 | MS.gene41790:CDS | 30.0% |
! | TCTAAGCACCTTTTTATTAG+AGG | + | chr7.4:21146383-21146402 | None:intergenic | 30.0% |
! | TGCAATATTCCTAACTGTTT+TGG | - | chr7.4:21147711-21147730 | MS.gene41790:intron | 30.0% |
! | TTGTTATTATGTACCTGTCA+TGG | + | chr7.4:21147454-21147473 | None:intergenic | 30.0% |
!! | ATGCTTAGATGTTGGTAATT+CGG | + | chr7.4:21150099-21150118 | None:intergenic | 30.0% |
!! | ATGTTCATTTTGGAAAGAAC+AGG | - | chr7.4:21149362-21149381 | MS.gene41790:CDS | 30.0% |
!! | ATTATAGTTGGTGGATATCT+AGG | - | chr7.4:21146735-21146754 | MS.gene41790:CDS | 30.0% |
!! | GGTTGATGATTTATGTAAGA+TGG | - | chr7.4:21148476-21148495 | MS.gene41790:intron | 30.0% |
!! | TGTTCATTTTGGAAAGAACA+GGG | - | chr7.4:21149363-21149382 | MS.gene41790:CDS | 30.0% |
!! | TTAAATTCTTCGCTTTTGCT+TGG | - | chr7.4:21148645-21148664 | MS.gene41790:intron | 30.0% |
!!! | ACTTATCACTTTTTAGTTCC+TGG | + | chr7.4:21149827-21149846 | None:intergenic | 30.0% |
!!! | AGTTTTGTTCTACGATAACT+TGG | - | chr7.4:21148008-21148027 | MS.gene41790:CDS | 30.0% |
!!! | CTTATCACTTTTTAGTTCCT+GGG | + | chr7.4:21149826-21149845 | None:intergenic | 30.0% |
AAACAATGAGCAAAAGCCAA+AGG | - | chr7.4:21149791-21149810 | MS.gene41790:CDS | 35.0% | |
AAATGCAATCTATGTTCCCT+CGG | - | chr7.4:21150225-21150244 | MS.gene41790:CDS | 35.0% | |
AACATCAGAGATCAGTGTAT+CGG | + | chr7.4:21148907-21148926 | None:intergenic | 35.0% | |
ACAATTAATACAGCTGCACA+TGG | + | chr7.4:21146528-21146547 | None:intergenic | 35.0% | |
ACACAAGAATGCTTAGATGT+TGG | + | chr7.4:21150107-21150126 | None:intergenic | 35.0% | |
ACATGCAGAATTGCAAATAC+TGG | + | chr7.4:21148435-21148454 | None:intergenic | 35.0% | |
ACCATAGCTCTTCTATGTAT+AGG | - | chr7.4:21149244-21149263 | MS.gene41790:intron | 35.0% | |
ACCCTTTGCCTCTAATAAAA+AGG | - | chr7.4:21146372-21146391 | MS.gene41790:intron | 35.0% | |
AGATAAGGGCAAGAATGAAA+TGG | + | chr7.4:21147586-21147605 | None:intergenic | 35.0% | |
AGGAGGTAAATACTCATAAG+AGG | - | chr7.4:21146974-21146993 | MS.gene41790:CDS | 35.0% | |
AGTAATAACACTGACAGTTC+AGG | - | chr7.4:21148792-21148811 | MS.gene41790:intron | 35.0% | |
AGTATCATCTTGCTTTATGC+AGG | + | chr7.4:21149516-21149535 | None:intergenic | 35.0% | |
AGTTATGTATGGTATGGTGA+TGG | - | chr7.4:21147536-21147555 | MS.gene41790:intron | 35.0% | |
ATAGGGATTCTCATAGTTAC+TGG | - | chr7.4:21149262-21149281 | MS.gene41790:intron | 35.0% | |
ATATAGAAGAGTCCCTCTAT+TGG | - | chr7.4:21148455-21148474 | MS.gene41790:intron | 35.0% | |
ATTCCTTCTCATTCAACAGT+AGG | + | chr7.4:21147636-21147655 | None:intergenic | 35.0% | |
ATTGATGTTCCAGAGTTCAA+CGG | - | chr7.4:21146665-21146684 | MS.gene41790:intron | 35.0% | |
ATTTCGGCTATATCAAGAAG+AGG | + | chr7.4:21146846-21146865 | None:intergenic | 35.0% | |
CAAGAAACAATAATGGTACC+AGG | + | chr7.4:21147783-21147802 | None:intergenic | 35.0% | |
CAAGCAAAACCTGAAATACA+AGG | + | chr7.4:21149970-21149989 | None:intergenic | 35.0% | |
CAGGTAAGAATGGAACAAAT+GGG | + | chr7.4:21149993-21150012 | None:intergenic | 35.0% | |
CAGGTTCAAAATAAGACATG+TGG | - | chr7.4:21148616-21148635 | MS.gene41790:intron | 35.0% | |
CCATAGCTCTTCTATGTATA+GGG | - | chr7.4:21149245-21149264 | MS.gene41790:intron | 35.0% | |
CCCAAGATCAATTAGTAAGT+AGG | + | chr7.4:21150037-21150056 | None:intergenic | 35.0% | |
CTTATGAGTATTTACCTCCT+CGG | + | chr7.4:21146974-21146993 | None:intergenic | 35.0% | |
CTTGTATCAGCAGTTATTGT+TGG | - | chr7.4:21147260-21147279 | MS.gene41790:intron | 35.0% | |
GAATAACTAGCAAGATCTAC+GGG | + | chr7.4:21148266-21148285 | None:intergenic | 35.0% | |
GAATGTGTGCTTGATTTATG+AGG | + | chr7.4:21147052-21147071 | None:intergenic | 35.0% | |
GACAGGTACATAATAACAAC+CGG | - | chr7.4:21147455-21147474 | MS.gene41790:intron | 35.0% | |
GCAAGAATTTCTCTTACACA+AGG | - | chr7.4:21148553-21148572 | MS.gene41790:intron | 35.0% | |
GCATAAAGCAAGATGATACT+AGG | - | chr7.4:21149516-21149535 | MS.gene41790:CDS | 35.0% | |
GGAGGTAAATACTCATAAGA+GGG | - | chr7.4:21146975-21146994 | MS.gene41790:CDS | 35.0% | |
GGATATCTAGGTTTCAAAAC+CGG | - | chr7.4:21146747-21146766 | MS.gene41790:CDS | 35.0% | |
GTAATAACACTGACAGTTCA+GGG | - | chr7.4:21148793-21148812 | MS.gene41790:intron | 35.0% | |
GTAGGTGTTTATTAGAATGC+AGG | + | chr7.4:21150019-21150038 | None:intergenic | 35.0% | |
GTTTCTGTGTGGTTGTTAAT+CGG | - | chr7.4:21150157-21150176 | MS.gene41790:intron | 35.0% | |
TACTTCGAAATTAGCGAAGA+TGG | + | chr7.4:21149330-21149349 | None:intergenic | 35.0% | |
TCAGGGTTCAACTCATAATA+TGG | + | chr7.4:21147293-21147312 | None:intergenic | 35.0% | |
TGATAAGTGGCATATTTGCA+GGG | - | chr7.4:21149839-21149858 | MS.gene41790:intron | 35.0% | |
TGCTGTTCTTGCATTCTTTA+TGG | - | chr7.4:21147959-21147978 | MS.gene41790:CDS | 35.0% | |
TGCTTACAAATAGGGACAAA+GGG | + | chr7.4:21146353-21146372 | None:intergenic | 35.0% | |
TTAAGTGTGTCGTACTAGTT+GGG | + | chr7.4:21146321-21146340 | None:intergenic | 35.0% | |
! | ATGGTCAAATTTTACAGACC+TGG | + | chr7.4:21149311-21149330 | None:intergenic | 35.0% |
! | ATTTTCCATACGGAGTGAAA+GGG | - | chr7.4:21146884-21146903 | MS.gene41790:intron | 35.0% |
! | ATTTTGCGCGTAACATTGTT+TGG | - | chr7.4:21149449-21149468 | MS.gene41790:intron | 35.0% |
! | CACCTTTTTATTAGAGGCAA+AGG | + | chr7.4:21146377-21146396 | None:intergenic | 35.0% |
! | CATTCAGTCCCTTTAGAAAT+TGG | - | chr7.4:21148954-21148973 | MS.gene41790:CDS | 35.0% |
! | GTGACAATAGTGCTTTTCAA+AGG | + | chr7.4:21147927-21147946 | None:intergenic | 35.0% |
! | GTTCATTACTTTGGGAATAC+AGG | - | chr7.4:21148076-21148095 | MS.gene41790:CDS | 35.0% |
! | TACCACAGGTATTTTCCATA+CGG | - | chr7.4:21146874-21146893 | MS.gene41790:intron | 35.0% |
! | TATTTTCCATACGGAGTGAA+AGG | - | chr7.4:21146883-21146902 | MS.gene41790:intron | 35.0% |
! | TGGTCAAATTTTACAGACCT+GGG | + | chr7.4:21149310-21149329 | None:intergenic | 35.0% |
!! | CATTTTCTTGTTTGAAGCTG+TGG | - | chr7.4:21148828-21148847 | MS.gene41790:intron | 35.0% |
!! | TACTTATTTCTCCTCCCTTT+TGG | - | chr7.4:21149408-21149427 | MS.gene41790:intron | 35.0% |
!! | TGAATTTCAGGGTTGATACA+TGG | - | chr7.4:21150128-21150147 | MS.gene41790:intron | 35.0% |
!! | TGCTTAGATGTTGGTAATTC+GGG | + | chr7.4:21150098-21150117 | None:intergenic | 35.0% |
!! | TTGAAAAGCACTATTGTCAC+TGG | - | chr7.4:21147927-21147946 | MS.gene41790:CDS | 35.0% |
!!! | TTATTGCAGGCCTTGTTTTT+TGG | - | chr7.4:21146435-21146454 | MS.gene41790:intron | 35.0% |
AAAGTGCAACACACCAGATT+TGG | + | chr7.4:21146098-21146117 | None:intergenic | 40.0% | |
AACAAAACAGTAGGATGCAG+TGG | - | chr7.4:21148582-21148601 | MS.gene41790:intron | 40.0% | |
AAGTGCAACACACCAGATTT+GGG | + | chr7.4:21146097-21146116 | None:intergenic | 40.0% | |
AATGCAGTCGATATACCGAT+TGG | + | chr7.4:21147215-21147234 | None:intergenic | 40.0% | |
AGACAACCTACCTTCATTTC+TGG | - | chr7.4:21146464-21146483 | MS.gene41790:intron | 40.0% | |
AGCTTTACTTTACCCATGAC+AGG | - | chr7.4:21147438-21147457 | MS.gene41790:intron | 40.0% | |
AGGATGCAGTGGAATACATA+CGG | - | chr7.4:21148593-21148612 | MS.gene41790:intron | 40.0% | |
ATATTTATCTCGGGGTTGCT+TGG | - | chr7.4:21146006-21146025 | MS.gene41790:CDS | 40.0% | |
ATCTAGGTTTCAAAACCGGA+TGG | - | chr7.4:21146751-21146770 | MS.gene41790:CDS | 40.0% | |
ATGGATGTTTCTCAGTTAGC+AGG | - | chr7.4:21147978-21147997 | MS.gene41790:CDS | 40.0% | |
CAAAACTGAAACTGCAACTG+TGG | + | chr7.4:21148129-21148148 | None:intergenic | 40.0% | |
CATCAACGAGATTTGCCAAT+CGG | - | chr7.4:21147197-21147216 | MS.gene41790:intron | 40.0% | |
CATCTGTTGATCCATTGTTG+TGG | - | chr7.4:21148201-21148220 | MS.gene41790:intron | 40.0% | |
CCCTATACATAGAAGAGCTA+TGG | + | chr7.4:21149248-21149267 | None:intergenic | 40.0% | |
CTAGAAAATGCTGAGGAGAT+CGG | + | chr7.4:21147320-21147339 | None:intergenic | 40.0% | |
CTTCCTACTGTTGAATGAGA+AGG | - | chr7.4:21147630-21147649 | MS.gene41790:intron | 40.0% | |
GAGAGCGAAAACTCTTCAAT+AGG | + | chr7.4:21149631-21149650 | None:intergenic | 40.0% | |
GATAAGTGGCATATTTGCAG+GGG | - | chr7.4:21149840-21149859 | MS.gene41790:intron | 40.0% | |
GATGATACTAGGCATACCTT+TGG | - | chr7.4:21149527-21149546 | MS.gene41790:CDS | 40.0% | |
GCAGGTAAGAATGGAACAAA+TGG | + | chr7.4:21149994-21150013 | None:intergenic | 40.0% | |
GGAATGCTATAACTGAAGTC+AGG | - | chr7.4:21147651-21147670 | MS.gene41790:intron | 40.0% | |
GTCTTGACCACCAAAAAACA+AGG | + | chr7.4:21146448-21146467 | None:intergenic | 40.0% | |
GTGATAAGTGGCATATTTGC+AGG | - | chr7.4:21149838-21149857 | MS.gene41790:intron | 40.0% | |
GTGATGATATTGAGGAAGAC+AGG | - | chr7.4:21148231-21148250 | MS.gene41790:intron | 40.0% | |
GTGCTTACAAATAGGGACAA+AGG | + | chr7.4:21146354-21146373 | None:intergenic | 40.0% | |
GTTAAGTGTGTCGTACTAGT+TGG | + | chr7.4:21146322-21146341 | None:intergenic | 40.0% | |
TAGAAAATGCTGAGGAGATC+GGG | + | chr7.4:21147319-21147338 | None:intergenic | 40.0% | |
TCCTGGGAATATATCACCTT+TGG | + | chr7.4:21149810-21149829 | None:intergenic | 40.0% | |
TCTAGGTTTCAAAACCGGAT+GGG | - | chr7.4:21146752-21146771 | MS.gene41790:CDS | 40.0% | |
TCTTGCCCTTATCTGTTACT+AGG | - | chr7.4:21147592-21147611 | MS.gene41790:intron | 40.0% | |
TGGATGTTTCTCAGTTAGCA+GGG | - | chr7.4:21147979-21147998 | MS.gene41790:CDS | 40.0% | |
TGTTTGTGCACATTGATACC+TGG | - | chr7.4:21147762-21147781 | MS.gene41790:intron | 40.0% | |
TTCAATAGTCATTACCCGCT+CGG | + | chr7.4:21146792-21146811 | None:intergenic | 40.0% | |
TTGGGAATACAGGTTAGTGT+GGG | - | chr7.4:21148086-21148105 | MS.gene41790:CDS | 40.0% | |
TTTATTAGAATGCAGGCAGC+AGG | + | chr7.4:21150012-21150031 | None:intergenic | 40.0% | |
TTTGGGAATACAGGTTAGTG+TGG | - | chr7.4:21148085-21148104 | MS.gene41790:CDS | 40.0% | |
! | AAGGTGCTTAGATATAGGGA+CGG | - | chr7.4:21146391-21146410 | MS.gene41790:intron | 40.0% |
! | GCATTCTGGTGATGATATTG+AGG | - | chr7.4:21148223-21148242 | MS.gene41790:intron | 40.0% |
! | TTCTAGCTATGGGATGGAAT+GGG | - | chr7.4:21147334-21147353 | MS.gene41790:intron | 40.0% |
! | TTGGTAATTCGGGCAAGTAA+TGG | + | chr7.4:21150088-21150107 | None:intergenic | 40.0% |
!! | AATGATTTGCTTGAGAGCGA+TGG | + | chr7.4:21150267-21150286 | None:intergenic | 40.0% |
!! | GCAAAGGGTGCTTACAAATA+GGG | + | chr7.4:21146361-21146380 | None:intergenic | 40.0% |
!! | TTTCTAGCTATGGGATGGAA+TGG | - | chr7.4:21147333-21147352 | MS.gene41790:intron | 40.0% |
!!! | AGCATTTTCTAGCTATGGGA+TGG | - | chr7.4:21147328-21147347 | MS.gene41790:intron | 40.0% |
!!! | CCTCAGCATTTTCTAGCTAT+GGG | - | chr7.4:21147324-21147343 | MS.gene41790:intron | 40.0% |
!!! | TCCTCAGCATTTTCTAGCTA+TGG | - | chr7.4:21147323-21147342 | MS.gene41790:intron | 40.0% |
AACATCCCTTTCACTCCGTA+TGG | + | chr7.4:21146892-21146911 | None:intergenic | 45.0% | |
ACAGATGTTAGCAGTGAAGC+TGG | + | chr7.4:21148188-21148207 | None:intergenic | 45.0% | |
AGAAAATGCTGAGGAGATCG+GGG | + | chr7.4:21147318-21147337 | None:intergenic | 45.0% | |
AGCAACGTAGTGAGAAGACT+AGG | - | chr7.4:21149203-21149222 | MS.gene41790:intron | 45.0% | |
AGCAAGATCTACGGGACTTA+CGG | + | chr7.4:21148258-21148277 | None:intergenic | 45.0% | |
AGTGCAACACACCAGATTTG+GGG | + | chr7.4:21146096-21146115 | None:intergenic | 45.0% | |
ATGGATATCTGAGAAGGAGG+AGG | + | chr7.4:21147889-21147908 | None:intergenic | 45.0% | |
CATGGCTAAGAGTTTCTGTG+TGG | - | chr7.4:21150146-21150165 | MS.gene41790:intron | 45.0% | |
CCCATAGCTAGAAAATGCTG+AGG | + | chr7.4:21147327-21147346 | None:intergenic | 45.0% | |
CCTATGGATATCTGAGAAGG+AGG | + | chr7.4:21147892-21147911 | None:intergenic | 45.0% | |
CCTCCTTCTCAGATATCCAT+AGG | - | chr7.4:21147889-21147908 | MS.gene41790:intron | 45.0% | |
CCTCTTGTGTCTTGGAATCA+AGG | - | chr7.4:21146560-21146579 | MS.gene41790:intron | 45.0% | |
CCTTGATTCCAAGACACAAG+AGG | + | chr7.4:21146563-21146582 | None:intergenic | 45.0% | |
CGTGTGCACAATCACCAAAA+GGG | + | chr7.4:21149425-21149444 | None:intergenic | 45.0% | |
CTCCGTATGGAAAATACCTG+TGG | + | chr7.4:21146879-21146898 | None:intergenic | 45.0% | |
CTTGTGTCTTGGAATCAAGG+AGG | - | chr7.4:21146563-21146582 | MS.gene41790:intron | 45.0% | |
GATCCATTGTTGTGGCATTC+TGG | - | chr7.4:21148209-21148228 | MS.gene41790:intron | 45.0% | |
GATTCCAAGACACAAGAGGA+GGG | + | chr7.4:21146559-21146578 | None:intergenic | 45.0% | |
GCCAAAGGTGATATATTCCC+AGG | - | chr7.4:21149806-21149825 | MS.gene41790:CDS | 45.0% | |
GTATGACGAGCCAGAAATGA+AGG | + | chr7.4:21146477-21146496 | None:intergenic | 45.0% | |
TACAGACCTGGGACATCTTT+CGG | + | chr7.4:21149299-21149318 | None:intergenic | 45.0% | |
TCAACCACTATTCCAAGACC+TGG | + | chr7.4:21146504-21146523 | None:intergenic | 45.0% | |
TCAATAGTCATTACCCGCTC+GGG | + | chr7.4:21146791-21146810 | None:intergenic | 45.0% | |
TCACCAGAATGCCACAACAA+TGG | + | chr7.4:21148215-21148234 | None:intergenic | 45.0% | |
TGATTCCAAGACACAAGAGG+AGG | + | chr7.4:21146560-21146579 | None:intergenic | 45.0% | |
TGCTTAGATATAGGGACGGA+AGG | - | chr7.4:21146395-21146414 | MS.gene41790:intron | 45.0% | |
TGGATATCTGAGAAGGAGGA+GGG | + | chr7.4:21147888-21147907 | None:intergenic | 45.0% | |
TGGATTGTACCGTTGAACTC+TGG | + | chr7.4:21146677-21146696 | None:intergenic | 45.0% | |
TGTTAGCAGTGAAGCTGGAA+CGG | + | chr7.4:21148183-21148202 | None:intergenic | 45.0% | |
TGTTTCTCAGTTAGCAGGGA+TGG | - | chr7.4:21147983-21148002 | MS.gene41790:CDS | 45.0% | |
TTAAAGAGCAGTGACAGCTC+CGG | + | chr7.4:21147477-21147496 | None:intergenic | 45.0% | |
! | CGCGTAACATTGTTTGGAGT+GGG | - | chr7.4:21149455-21149474 | MS.gene41790:intron | 45.0% |
! | GAACGTCTGACTTGTCATGT+AGG | + | chr7.4:21148301-21148320 | None:intergenic | 45.0% |
!! | GGCAAAGGGTGCTTACAAAT+AGG | + | chr7.4:21146362-21146381 | None:intergenic | 45.0% |
!!! | TTGCAGGCCTTGTTTTTTGG+TGG | - | chr7.4:21146438-21146457 | MS.gene41790:intron | 45.0% |
!! | TTAAATATTTATATTTATCT+CGG | - | chr7.4:21145996-21146015 | MS.gene41790:CDS | 5.0% |
!! | TTTATAAATGATTAATAATT+GGG | - | chr7.4:21148858-21148877 | MS.gene41790:intron | 5.0% |
!!! | ATTAAAAAAAATGTTATTTA+AGG | - | chr7.4:21149721-21149740 | MS.gene41790:CDS | 5.0% |
!!! | TTAAAAAAAATGTTATTTAA+GGG | - | chr7.4:21149722-21149741 | MS.gene41790:CDS | 5.0% |
AAGGAATCTGTGTGCGCCTA+TGG | + | chr7.4:21147908-21147927 | None:intergenic | 50.0% | |
AGCGATGGATCTCATCAGCA+CGG | + | chr7.4:21150252-21150271 | None:intergenic | 50.0% | |
AGGCATACCTTTGGACACTC+AGG | - | chr7.4:21149536-21149555 | MS.gene41790:CDS | 50.0% | |
ATCACCCTCCTCTTGTGTCT+TGG | - | chr7.4:21146552-21146571 | MS.gene41790:intron | 50.0% | |
ATGCAGGCAGCAGGTAAGAA+TGG | + | chr7.4:21150003-21150022 | None:intergenic | 50.0% | |
CACTATTCCAAGACCTGGCA+AGG | + | chr7.4:21146499-21146518 | None:intergenic | 50.0% | |
CATACCTCCTGAGTGTCCAA+AGG | + | chr7.4:21149546-21149565 | None:intergenic | 50.0% | |
CATACCTTTGGACACTCAGG+AGG | - | chr7.4:21149539-21149558 | MS.gene41790:CDS | 50.0% | |
CTAGGAGAAAACTCGCAGCA+TGG | - | chr7.4:21149221-21149240 | MS.gene41790:intron | 50.0% | |
CTGCAAAACACACGTGCCAA+TGG | + | chr7.4:21147826-21147845 | None:intergenic | 50.0% | |
CTTGCCAGGTCTTGGAATAG+TGG | - | chr7.4:21146497-21146516 | MS.gene41790:intron | 50.0% | |
GACAGTTCAGGGTGTGCATT+AGG | - | chr7.4:21148804-21148823 | MS.gene41790:CDS | 50.0% | |
GACGAGCCAGAAATGAAGGT+AGG | + | chr7.4:21146473-21146492 | None:intergenic | 50.0% | |
GAGCTCATAACCAACCCATC+CGG | + | chr7.4:21146769-21146788 | None:intergenic | 50.0% | |
GCGCCTATGGATATCTGAGA+AGG | + | chr7.4:21147895-21147914 | None:intergenic | 50.0% | |
GCGCGTAACATTGTTTGGAG+TGG | - | chr7.4:21149454-21149473 | MS.gene41790:intron | 50.0% | |
GCGTGTGCACAATCACCAAA+AGG | + | chr7.4:21149426-21149445 | None:intergenic | 50.0% | |
GGAGTGAAAGGGATGTTTGC+TGG | - | chr7.4:21146895-21146914 | MS.gene41790:intron | 50.0% | |
GGTCTTTATGGCAATGGCCA+GGG | - | chr7.4:21147851-21147870 | MS.gene41790:intron | 50.0% | |
GGTTTCAAAACCGGATGGGT+TGG | - | chr7.4:21146756-21146775 | MS.gene41790:CDS | 50.0% | |
GTGCACAATCACCAAAAGGG+AGG | + | chr7.4:21149422-21149441 | None:intergenic | 50.0% | |
GTTAGCAGTGAAGCTGGAAC+GGG | + | chr7.4:21148182-21148201 | None:intergenic | 50.0% | |
TCGTGGCATAACCCCAAATC+TGG | - | chr7.4:21146082-21146101 | MS.gene41790:CDS | 50.0% | |
TGCAGTGGAATACATACGGC+AGG | - | chr7.4:21148597-21148616 | MS.gene41790:intron | 50.0% | |
TTATCTCGGGGTTGCTTGGT+TGG | - | chr7.4:21146010-21146029 | MS.gene41790:CDS | 50.0% | |
TTTATGGCAATGGCCAGGGA+TGG | - | chr7.4:21147855-21147874 | MS.gene41790:intron | 50.0% | |
TTTGCAGCCACGGGTCTTTA+TGG | - | chr7.4:21147839-21147858 | MS.gene41790:intron | 50.0% | |
TTTGTGCAGCATAACTGCGC+TGG | - | chr7.4:21149490-21149509 | MS.gene41790:CDS | 50.0% | |
! | GGGCAGTGTAAGGTTTGCTT+GGG | - | chr7.4:21147354-21147373 | MS.gene41790:intron | 50.0% |
! | TGGGCAGTGTAAGGTTTGCT+TGG | - | chr7.4:21147353-21147372 | MS.gene41790:intron | 50.0% |
! | TTTGGTGATTGTGCACACGC+AGG | - | chr7.4:21149426-21149445 | MS.gene41790:intron | 50.0% |
ATTTACCTCCTCGGCTGTGC+TGG | + | chr7.4:21146965-21146984 | None:intergenic | 55.0% | |
CGTCATACCTTGCCAGGTCT+TGG | - | chr7.4:21146489-21146508 | MS.gene41790:intron | 55.0% | |
CTTCAGCCGAAAGATGTCCC+AGG | - | chr7.4:21149290-21149309 | MS.gene41790:intron | 55.0% | |
GAACGGGTACTTCATCAGGC+GGG | + | chr7.4:21148166-21148185 | None:intergenic | 55.0% | |
GCCACGGGTCTTTATGGCAA+TGG | - | chr7.4:21147845-21147864 | MS.gene41790:intron | 55.0% | |
GCCATTGCCATAAAGACCCG+TGG | + | chr7.4:21147849-21147868 | None:intergenic | 55.0% | |
GCGATGGATCTCATCAGCAC+GGG | + | chr7.4:21150251-21150270 | None:intergenic | 55.0% | |
GCTGGAACGGGTACTTCATC+AGG | + | chr7.4:21148170-21148189 | None:intergenic | 55.0% | |
GGAACGGGTACTTCATCAGG+CGG | + | chr7.4:21148167-21148186 | None:intergenic | 55.0% | |
GGGATGGAATGGGCAGTGTA+AGG | - | chr7.4:21147344-21147363 | MS.gene41790:intron | 55.0% | |
GGGTCTTTATGGCAATGGCC+AGG | - | chr7.4:21147850-21147869 | MS.gene41790:intron | 55.0% | |
GTTGGTTATGAGCTCCCGAG+CGG | - | chr7.4:21146774-21146793 | MS.gene41790:CDS | 55.0% | |
TTGGTTATGAGCTCCCGAGC+GGG | - | chr7.4:21146775-21146794 | MS.gene41790:CDS | 55.0% | |
! | CACGTGTGTTTTGCAGCCAC+GGG | - | chr7.4:21147830-21147849 | MS.gene41790:intron | 55.0% |
! | CTGAGGAGATCGGGGTATCA+GGG | + | chr7.4:21147310-21147329 | None:intergenic | 55.0% |
! | GCACGTGTGTTTTGCAGCCA+CGG | - | chr7.4:21147829-21147848 | MS.gene41790:intron | 55.0% |
ATCTCATCAGCACGGGCCGA+GGG | + | chr7.4:21150244-21150263 | None:intergenic | 60.0% | |
CTCGGGGTTGCTTGGTTGGT+TGG | - | chr7.4:21146014-21146033 | MS.gene41790:CDS | 60.0% | |
GGAGGGCAACAAACCATCCC+TGG | + | chr7.4:21147871-21147890 | None:intergenic | 60.0% | |
GGTGCTTCAGCTGTTGCTCG+TGG | - | chr7.4:21146065-21146084 | MS.gene41790:CDS | 60.0% | |
TTCAGTGACCAGCACAGCCG+AGG | - | chr7.4:21146954-21146973 | MS.gene41790:intron | 60.0% | |
! | CTGGCTCGTCATACCTTGCC+AGG | - | chr7.4:21146483-21146502 | MS.gene41790:intron | 60.0% |
! | GCTGAGGAGATCGGGGTATC+AGG | + | chr7.4:21147311-21147330 | None:intergenic | 60.0% |
! | GGGTTGCTTGGTTGGTTGGC+TGG | - | chr7.4:21146018-21146037 | MS.gene41790:CDS | 60.0% |
AGTGACCAGCACAGCCGAGG+AGG | - | chr7.4:21146957-21146976 | MS.gene41790:intron | 65.0% | |
GATCTCATCAGCACGGGCCG+AGG | + | chr7.4:21150245-21150264 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 21145990 | 21150294 | 21145990 | ID=MS.gene41790 |
chr7.4 | mRNA | 21145990 | 21150294 | 21145990 | ID=MS.gene41790.t1;Parent=MS.gene41790 |
chr7.4 | exon | 21150181 | 21150294 | 21150181 | ID=MS.gene41790.t1.exon1;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21150181 | 21150294 | 21150181 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21149700 | 21149840 | 21149700 | ID=MS.gene41790.t1.exon2;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21149700 | 21149840 | 21149700 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21149488 | 21149606 | 21149488 | ID=MS.gene41790.t1.exon3;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21149488 | 21149606 | 21149488 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21149306 | 21149402 | 21149306 | ID=MS.gene41790.t1.exon4;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21149306 | 21149402 | 21149306 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21148924 | 21149096 | 21148924 | ID=MS.gene41790.t1.exon5;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21148924 | 21149096 | 21148924 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21148797 | 21148824 | 21148797 | ID=MS.gene41790.t1.exon6;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21148797 | 21148824 | 21148797 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21148280 | 21148438 | 21148280 | ID=MS.gene41790.t1.exon7;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21148280 | 21148438 | 21148280 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21147925 | 21148186 | 21147925 | ID=MS.gene41790.t1.exon8;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21147925 | 21148186 | 21147925 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21146973 | 21147105 | 21146973 | ID=MS.gene41790.t1.exon9;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21146973 | 21147105 | 21146973 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21146724 | 21146836 | 21146724 | ID=MS.gene41790.t1.exon10;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21146724 | 21146836 | 21146724 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21146229 | 21146304 | 21146229 | ID=MS.gene41790.t1.exon11;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21146229 | 21146304 | 21146229 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
chr7.4 | exon | 21145990 | 21146146 | 21145990 | ID=MS.gene41790.t1.exon12;Parent=MS.gene41790.t1 |
chr7.4 | CDS | 21145990 | 21146146 | 21145990 | ID=cds.MS.gene41790.t1;Parent=MS.gene41790.t1 |
Gene Sequence |
Protein sequence |