Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32468.t1 | XP_003616526.1 | 96.2 | 576 | 19 | 2 | 1 | 573 | 1 | 576 | 0.00E+00 | 1096.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32468.t1 | F4K295 | 59.1 | 543 | 207 | 9 | 42 | 571 | 63 | 603 | 8.5e-166 | 585.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32468.t1 | F6LPU5 | 96.2 | 576 | 19 | 2 | 1 | 573 | 1 | 576 | 0.0e+00 | 1096.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene32468 | 0.827498 | 1.51E-54 | -1.69E-46 |
| MS.gene050297 | MS.gene32468 | 0.821412 | 4.09E-53 | -1.69E-46 |
| MS.gene051955 | MS.gene32468 | 0.840983 | 6.26E-58 | -1.69E-46 |
| MS.gene052308 | MS.gene32468 | 0.817364 | 3.43E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene32468 | 0.831776 | 1.38E-55 | -1.69E-46 |
| MS.gene053348 | MS.gene32468 | 0.801553 | 8.53E-49 | -1.69E-46 |
| MS.gene053416 | MS.gene32468 | 0.805201 | 1.50E-49 | -1.69E-46 |
| MS.gene053417 | MS.gene32468 | 0.804815 | 1.80E-49 | -1.69E-46 |
| MS.gene054552 | MS.gene32468 | 0.806635 | 7.48E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene32468 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene055308 | MS.gene32468 | 0.813494 | 2.49E-51 | -1.69E-46 |
| MS.gene055578 | MS.gene32468 | 0.827885 | 1.22E-54 | -1.69E-46 |
| MS.gene055579 | MS.gene32468 | 0.809079 | 2.26E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene32468 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene32468 | 0.86087 | 1.53E-63 | -1.69E-46 |
| MS.gene056042 | MS.gene32468 | 0.821552 | 3.80E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene32468 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene056526 | MS.gene32468 | 0.834508 | 2.88E-56 | -1.69E-46 |
| MS.gene056528 | MS.gene32468 | 0.804885 | 1.74E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene32468 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene058196 | MS.gene32468 | 0.811087 | 8.34E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene32468 | 0.823656 | 1.23E-53 | -1.69E-46 |
| MS.gene059300 | MS.gene32468 | 0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene059553 | MS.gene32468 | 0.811194 | 7.91E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene32468 | 0.883024 | 6.37E-71 | -1.69E-46 |
| MS.gene060565 | MS.gene32468 | 0.888881 | 3.98E-73 | -1.69E-46 |
| MS.gene06057 | MS.gene32468 | 0.817457 | 3.26E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene32468 | 0.812269 | 4.62E-51 | -1.69E-46 |
| MS.gene061099 | MS.gene32468 | 0.829974 | 3.81E-55 | -1.69E-46 |
| MS.gene061260 | MS.gene32468 | 0.850692 | 1.44E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32468.t1 | MTR_5g081410 | 96.007 | 576 | 20 | 2 | 1 | 573 | 1 | 576 | 0.0 | 1093 |
| MS.gene32468.t1 | MTR_3g069590 | 67.715 | 604 | 149 | 13 | 1 | 569 | 1 | 593 | 0.0 | 769 |
| MS.gene32468.t1 | MTR_7g065220 | 60.931 | 494 | 189 | 2 | 44 | 536 | 148 | 638 | 0.0 | 625 |
| MS.gene32468.t1 | MTR_3g069590 | 69.794 | 437 | 100 | 6 | 1 | 411 | 1 | 431 | 0.0 | 596 |
| MS.gene32468.t1 | MTR_4g019770 | 62.791 | 430 | 152 | 2 | 42 | 467 | 54 | 479 | 0.0 | 551 |
| MS.gene32468.t1 | MTR_4g075640 | 53.361 | 476 | 197 | 6 | 82 | 552 | 89 | 544 | 2.44e-163 | 477 |
| MS.gene32468.t1 | MTR_8g030850 | 56.267 | 375 | 143 | 4 | 82 | 443 | 99 | 465 | 2.57e-138 | 410 |
| MS.gene32468.t1 | MTR_7g077690 | 51.914 | 418 | 137 | 4 | 82 | 443 | 115 | 524 | 4.47e-132 | 396 |
| MS.gene32468.t1 | MTR_6g087700 | 49.487 | 390 | 169 | 6 | 82 | 462 | 98 | 468 | 1.67e-127 | 385 |
| MS.gene32468.t1 | MTR_2g101830 | 49.036 | 363 | 166 | 4 | 82 | 443 | 88 | 432 | 1.22e-121 | 369 |
| MS.gene32468.t1 | MTR_5g025960 | 46.133 | 362 | 185 | 2 | 82 | 443 | 120 | 471 | 2.18e-106 | 331 |
| MS.gene32468.t1 | MTR_4g013165 | 46.082 | 319 | 151 | 4 | 131 | 448 | 1 | 299 | 2.69e-98 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32468.t1 | AT5G05940 | 61.706 | 504 | 182 | 7 | 42 | 534 | 63 | 566 | 0.0 | 613 |
| MS.gene32468.t1 | AT5G02010 | 62.683 | 477 | 143 | 8 | 63 | 529 | 52 | 503 | 0.0 | 598 |
| MS.gene32468.t1 | AT3G55660 | 53.282 | 518 | 205 | 8 | 42 | 531 | 71 | 579 | 8.44e-176 | 509 |
| MS.gene32468.t1 | AT5G05940 | 65.147 | 373 | 127 | 2 | 42 | 411 | 63 | 435 | 1.06e-175 | 506 |
| MS.gene32468.t1 | AT4G38430 | 56.440 | 427 | 172 | 5 | 67 | 489 | 80 | 496 | 6.42e-163 | 476 |
| MS.gene32468.t1 | AT3G55660 | 59.249 | 373 | 143 | 3 | 42 | 411 | 71 | 437 | 1.61e-152 | 445 |
| MS.gene32468.t1 | AT4G00460 | 57.181 | 376 | 146 | 5 | 82 | 450 | 106 | 473 | 2.68e-143 | 423 |
| MS.gene32468.t1 | AT4G00460 | 57.181 | 376 | 146 | 5 | 82 | 450 | 106 | 473 | 2.68e-143 | 423 |
| MS.gene32468.t1 | AT1G01700 | 57.995 | 369 | 140 | 5 | 82 | 443 | 118 | 478 | 1.32e-140 | 416 |
| MS.gene32468.t1 | AT1G01700 | 53.634 | 399 | 140 | 6 | 82 | 443 | 118 | 508 | 4.10e-134 | 401 |
| MS.gene32468.t1 | AT3G24620 | 51.781 | 365 | 156 | 4 | 82 | 445 | 87 | 432 | 1.15e-131 | 395 |
| MS.gene32468.t1 | AT2G45890 | 52.243 | 379 | 160 | 6 | 82 | 450 | 95 | 462 | 2.43e-128 | 384 |
| MS.gene32468.t1 | AT4G13240 | 49.319 | 367 | 166 | 4 | 82 | 447 | 76 | 423 | 2.84e-125 | 378 |
| MS.gene32468.t1 | AT4G00460 | 53.959 | 341 | 142 | 5 | 117 | 450 | 8 | 340 | 1.56e-121 | 362 |
| MS.gene32468.t1 | AT1G52240 | 50.815 | 368 | 158 | 5 | 82 | 448 | 106 | 451 | 2.03e-121 | 369 |
| MS.gene32468.t1 | AT1G79860 | 48.760 | 363 | 165 | 5 | 82 | 443 | 94 | 436 | 1.93e-120 | 365 |
| MS.gene32468.t1 | AT1G01700 | 53.846 | 351 | 140 | 6 | 82 | 418 | 118 | 460 | 6.48e-118 | 357 |
| MS.gene32468.t1 | AT3G16130 | 48.533 | 375 | 175 | 5 | 75 | 448 | 85 | 442 | 1.08e-116 | 357 |
| MS.gene32468.t1 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 46 | 395 | 4.17e-114 | 348 |
| MS.gene32468.t1 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 46 | 395 | 4.17e-114 | 348 |
| MS.gene32468.t1 | AT5G19560 | 47.411 | 367 | 175 | 4 | 82 | 447 | 65 | 414 | 9.40e-114 | 348 |
| MS.gene32468.t1 | AT5G19560 | 45.921 | 331 | 161 | 4 | 82 | 411 | 65 | 378 | 3.06e-98 | 304 |
| MS.gene32468.t1 | AT1G31650 | 41.892 | 370 | 196 | 3 | 82 | 446 | 110 | 465 | 4.17e-97 | 306 |
| MS.gene32468.t1 | AT1G31650 | 41.892 | 370 | 196 | 3 | 82 | 446 | 138 | 493 | 1.34e-96 | 306 |
| MS.gene32468.t1 | AT4G00460 | 58.333 | 228 | 90 | 3 | 82 | 306 | 106 | 331 | 6.63e-82 | 260 |
| MS.gene32468.t1 | AT1G01700 | 60.280 | 214 | 82 | 2 | 82 | 292 | 118 | 331 | 9.29e-80 | 256 |
| MS.gene32468.t1 | AT1G01700 | 60.280 | 214 | 82 | 2 | 82 | 292 | 118 | 331 | 9.29e-80 | 256 |
| MS.gene32468.t1 | AT5G19560 | 44.604 | 278 | 136 | 4 | 171 | 447 | 5 | 265 | 5.00e-76 | 246 |
Find 105 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGCTGCTTTCAGTATT+TGG | 0.134248 | 5.1:+63596859 | None:intergenic |
| TAACATGGTTTCACAGAAAA+AGG | 0.190047 | 5.1:-63595718 | MS.gene32468:CDS |
| TTGTTATTGTTGTGGATAAA+TGG | 0.229646 | 5.1:+63595585 | None:intergenic |
| GGAAGTTCCCGAGTCGTATT+TGG | 0.241485 | 5.1:-63596808 | MS.gene32468:CDS |
| GGTCTTCTTCATTTCCTATT+AGG | 0.245693 | 5.1:-63598412 | MS.gene32468:CDS |
| AGAAAGCTATTCAAGAGTTT+TGG | 0.254846 | 5.1:-63595838 | MS.gene32468:CDS |
| CAACATGTAGGAACTGTATT+TGG | 0.265120 | 5.1:-63597894 | MS.gene32468:intron |
| TCTTGAATAGCTTTCTAGTA+TGG | 0.268560 | 5.1:+63595845 | None:intergenic |
| TTCATCTGATTTGCTACATT+TGG | 0.286431 | 5.1:+63598376 | None:intergenic |
| TTGTTGAGTTAATGCCTTCT+TGG | 0.293497 | 5.1:-63597782 | MS.gene32468:CDS |
| GCAGGAGGCACACGGGGTAC+TGG | 0.311400 | 5.1:+63596936 | None:intergenic |
| GAACTGTATTTGGACAATTA+TGG | 0.318046 | 5.1:-63597884 | MS.gene32468:CDS |
| GTTGCACTGCTATGGAGTTT+TGG | 0.323799 | 5.1:-63597049 | MS.gene32468:CDS |
| AAACCTCAACGTCGTGGTTT+CGG | 0.329028 | 5.1:-63595555 | MS.gene32468:CDS |
| TGGAAATCTATCTGAATGTT+TGG | 0.339488 | 5.1:+63595755 | None:intergenic |
| GACATAGTGCCCTTCCTAAT+AGG | 0.352007 | 5.1:+63598398 | None:intergenic |
| TTCATTGAAGCAGCGCTTCC+CGG | 0.357161 | 5.1:-63596297 | MS.gene32468:CDS |
| TTATCATCAACTTGAGAAAC+AGG | 0.378270 | 5.1:+63598341 | None:intergenic |
| AGAAAAGTGGCAGAGAGAAA+TGG | 0.381993 | 5.1:-63597832 | MS.gene32468:CDS |
| AGAGTGTTGTCAAATTATCT+TGG | 0.399409 | 5.1:-63595525 | MS.gene32468:CDS |
| CATCTGGTGCCACAATTCCT+TGG | 0.414903 | 5.1:+63597018 | None:intergenic |
| CTGATTTCTCTTGCGAAAAG+AGG | 0.416366 | 5.1:+63596983 | None:intergenic |
| CTCAAGTGCAACATGCTCAT+TGG | 0.420115 | 5.1:+63596493 | None:intergenic |
| GGACATTGTGAAGGACTTCA+TGG | 0.423504 | 5.1:-63596372 | MS.gene32468:CDS |
| CATAAATTGCGGCTTCTAAA+CGG | 0.424426 | 5.1:+63596462 | None:intergenic |
| GGAGTTATCTCTCCCTTTGA+AGG | 0.425856 | 5.1:+63595606 | None:intergenic |
| TAGAAGCCGCAATTTATGTA+TGG | 0.430551 | 5.1:-63596457 | MS.gene32468:CDS |
| CCCTTTGAAGGACTAATTAG+TGG | 0.432878 | 5.1:+63595618 | None:intergenic |
| GTGAAGGACTTCATGGTTGA+TGG | 0.439958 | 5.1:-63596365 | MS.gene32468:CDS |
| TTTAGATAGTTGCACTGCTA+TGG | 0.442885 | 5.1:-63597057 | MS.gene32468:CDS |
| TCAGAATGGAAGAACGTGCT+TGG | 0.444622 | 5.1:-63596588 | MS.gene32468:intron |
| CAGGAGGCACACGGGGTACT+GGG | 0.446468 | 5.1:+63596937 | None:intergenic |
| TCAGGATATGTTTGCCAAGA+AGG | 0.453625 | 5.1:+63597768 | None:intergenic |
| CAGAATGGAAGAACGTGCTT+GGG | 0.465023 | 5.1:-63596587 | MS.gene32468:CDS |
| TGTGAAACCATGTTAACCAT+TGG | 0.466695 | 5.1:+63595726 | None:intergenic |
| GAGGCTGATCCATCTGCATC+TGG | 0.467719 | 5.1:+63597002 | None:intergenic |
| AGCATGAAACCTTGTTGCAT+TGG | 0.469347 | 5.1:+63596240 | None:intergenic |
| GCAAGCACTCTTGAGAGAAC+TGG | 0.473659 | 5.1:+63596534 | None:intergenic |
| TCATTGAAGCAGCGCTTCCC+GGG | 0.475313 | 5.1:-63596296 | MS.gene32468:CDS |
| CTGCTTGGTGAAGATATGTC+AGG | 0.475560 | 5.1:-63598104 | MS.gene32468:CDS |
| ATCAGGAGGGGATATGATGA+AGG | 0.476878 | 5.1:-63598144 | MS.gene32468:intron |
| TAGATTTCCATTGGCTCCAA+TGG | 0.482149 | 5.1:-63595742 | MS.gene32468:CDS |
| CAGCATTGCTTTAGATGACA+TGG | 0.484744 | 5.1:-63596829 | MS.gene32468:CDS |
| TTCTTCATTTCCTATTAGGA+AGG | 0.485913 | 5.1:-63598408 | MS.gene32468:CDS |
| AATGGGTCTTGTAGTTCCAC+TGG | 0.490578 | 5.1:-63598479 | MS.gene32468:CDS |
| GTTCGACTACAAAGTCATCC+TGG | 0.490964 | 5.1:-63596394 | MS.gene32468:CDS |
| GGTGAAGATATGTCAGGGTC+TGG | 0.491025 | 5.1:-63598098 | MS.gene32468:CDS |
| GTACCCCGTGTGCCTCCTGC+CGG | 0.499229 | 5.1:-63596933 | MS.gene32468:CDS |
| TTGTCGAGTTTACGTAGAGC+TGG | 0.504038 | 5.1:+63597187 | None:intergenic |
| GTATTTGGATACCCTTCCTA+AGG | 0.508742 | 5.1:-63596793 | MS.gene32468:intron |
| ACATTCAGATAGATTTCCAT+TGG | 0.512184 | 5.1:-63595751 | MS.gene32468:CDS |
| GATATGTCAGGGTCTGGAAA+AGG | 0.513629 | 5.1:-63598092 | MS.gene32468:CDS |
| TAATGATGTTGTTATTGTTG+TGG | 0.518234 | 5.1:+63595577 | None:intergenic |
| ACCTCTAGCTTACTACCATC+AGG | 0.519299 | 5.1:+63597750 | None:intergenic |
| TCTTGAGTTCTCACTGAGAC+CGG | 0.521027 | 5.1:+63596914 | None:intergenic |
| ATGTAGTTTGACTTAAACCC+GGG | 0.524605 | 5.1:+63596279 | None:intergenic |
| TGGAAAATCAAACCTTAGGA+AGG | 0.525020 | 5.1:+63596781 | None:intergenic |
| GAGTTCTCACTGAGACCGGC+AGG | 0.534877 | 5.1:+63596918 | None:intergenic |
| ATCAGCGGCAAGAGGAGAAG+TGG | 0.535708 | 5.1:-63596965 | MS.gene32468:CDS |
| ATGTTAACCATTGGAGCCAA+TGG | 0.540862 | 5.1:+63595735 | None:intergenic |
| GCCACTAATTAGTCCTTCAA+AGG | 0.542594 | 5.1:-63595619 | MS.gene32468:CDS |
| GTGTTGTCAAATTATCTTGG+AGG | 0.544230 | 5.1:-63595522 | MS.gene32468:CDS |
| ATGGATTGGCTTCTTTGTGT+TGG | 0.544302 | 5.1:-63597813 | MS.gene32468:CDS |
| TCTTCATTTCCTATTAGGAA+GGG | 0.555428 | 5.1:-63598407 | MS.gene32468:CDS |
| ACTTTGTAGTCGAACGGCTA+GGG | 0.555981 | 5.1:+63596402 | None:intergenic |
| CCACTAATTAGTCCTTCAAA+GGG | 0.557284 | 5.1:-63595618 | MS.gene32468:CDS |
| GAAGTCCTTCACAATGTCCC+AGG | 0.565686 | 5.1:+63596376 | None:intergenic |
| GACTTTGTAGTCGAACGGCT+AGG | 0.567248 | 5.1:+63596401 | None:intergenic |
| AAAAGGAGTTAGCACTGCAT+TGG | 0.568507 | 5.1:-63598075 | MS.gene32468:CDS |
| ATTGGCTCCAATGGTTAACA+TGG | 0.571176 | 5.1:-63595733 | MS.gene32468:CDS |
| AGTGGCAGAGAGAAATGGAT+TGG | 0.572062 | 5.1:-63597827 | MS.gene32468:CDS |
| GGGTTTAAGTCAAACTACAT+TGG | 0.572158 | 5.1:-63596276 | MS.gene32468:CDS |
| ACACCGAAACCACGACGTTG+AGG | 0.573851 | 5.1:+63595552 | None:intergenic |
| GTGGTTTAGAGTGAGATCTC+TGG | 0.574600 | 5.1:+63596432 | None:intergenic |
| GAAGGACTAATTAGTGGCAC+AGG | 0.574721 | 5.1:+63595624 | None:intergenic |
| TGAGACCGGCAGGAGGCACA+CGG | 0.577679 | 5.1:+63596928 | None:intergenic |
| CATGTGAAAAGAAAGAAAAG+TGG | 0.581474 | 5.1:-63597845 | MS.gene32468:CDS |
| AGGTTTGCGAAGTTACTGCT+TGG | 0.585242 | 5.1:-63598119 | MS.gene32468:CDS |
| TTCGACTACAAAGTCATCCT+GGG | 0.585548 | 5.1:-63596393 | MS.gene32468:CDS |
| GAGACCGGCAGGAGGCACAC+GGG | 0.597490 | 5.1:+63596929 | None:intergenic |
| CAAGAGAAATCAGCGGCAAG+AGG | 0.598859 | 5.1:-63596973 | MS.gene32468:CDS |
| AATGCTATTACTAATTTGTG+TGG | 0.601531 | 5.1:-63598044 | MS.gene32468:intron |
| GTATGTTGACCAAGGAATTG+TGG | 0.604214 | 5.1:-63597027 | MS.gene32468:CDS |
| GAGGGGATATGATGAAGGAA+AGG | 0.608465 | 5.1:-63598139 | MS.gene32468:CDS |
| AATGTAGTTTGACTTAAACC+CGG | 0.610470 | 5.1:+63596278 | None:intergenic |
| GTCATCCTGGGACATTGTGA+AGG | 0.614434 | 5.1:-63596381 | MS.gene32468:CDS |
| ATCATTAAACCTCAACGTCG+TGG | 0.616962 | 5.1:-63595561 | MS.gene32468:CDS |
| TGCTTGGTGAAGATATGTCA+GGG | 0.618748 | 5.1:-63598103 | MS.gene32468:CDS |
| AGCAATGCTGTTGATAGACA+TGG | 0.626027 | 5.1:+63596842 | None:intergenic |
| TCCTGATGGTAGTAAGCTAG+AGG | 0.628089 | 5.1:-63597751 | MS.gene32468:intron |
| TCTTGGCAAACATATCCTGA+TGG | 0.629177 | 5.1:-63597765 | MS.gene32468:CDS |
| AGGATGACTTTGTAGTCGAA+CGG | 0.629366 | 5.1:+63596396 | None:intergenic |
| AAGGGTATCCAAATACGACT+CGG | 0.630421 | 5.1:+63596800 | None:intergenic |
| GGAAAATCAAACCTTAGGAA+GGG | 0.632917 | 5.1:+63596782 | None:intergenic |
| TTGCAAGATCCAATGCAACA+AGG | 0.637712 | 5.1:-63596249 | MS.gene32468:intron |
| ATCTGAGCAACACGATCCAG+TGG | 0.638385 | 5.1:+63598463 | None:intergenic |
| AGGGTATCCAAATACGACTC+GGG | 0.638687 | 5.1:+63596801 | None:intergenic |
| AGACCGGCAGGAGGCACACG+GGG | 0.642385 | 5.1:+63596930 | None:intergenic |
| GTCGAACGGCTAGGGTAGAG+TGG | 0.643760 | 5.1:+63596410 | None:intergenic |
| ATTGTGGCACCAGATGCAGA+TGG | 0.645033 | 5.1:-63597011 | MS.gene32468:CDS |
| AGCGGCAAGAGGAGAAGTGG+TGG | 0.645482 | 5.1:-63596962 | MS.gene32468:CDS |
| TTCTCACTGAGACCGGCAGG+AGG | 0.665518 | 5.1:+63596921 | None:intergenic |
| GCACTCTTGAGAGAACTGGT+CGG | 0.681945 | 5.1:+63596538 | None:intergenic |
| GAACGGCTAGGGTAGAGTGG+TGG | 0.690009 | 5.1:+63596413 | None:intergenic |
| CTGGTGCCATACATAAATTG+CGG | 0.695871 | 5.1:+63596451 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAGATAAACAATTTAATT+AGG | + | chr5.1:63597990-63598009 | None:intergenic | 10.0% |
| !!! | TTATTTTATCTTTCTATAAA+TGG | - | chr5.1:63597891-63597910 | MS.gene32468:intron | 10.0% |
| !! | TTCAACAAAGATTAATAAAT+AGG | - | chr5.1:63596236-63596255 | MS.gene32468:intron | 15.0% |
| !!! | AATTTTCAAAAGAGAAAAAA+TGG | - | chr5.1:63595419-63595438 | MS.gene32468:CDS | 15.0% |
| !!! | ATTTTCAAAAGAGAAAAAAT+GGG | - | chr5.1:63595420-63595439 | MS.gene32468:CDS | 15.0% |
| !!! | TTGTAATAAATATTGATAGT+AGG | - | chr5.1:63595906-63595925 | MS.gene32468:intron | 15.0% |
| !! | ACATTAAACTCACATATATA+AGG | + | chr5.1:63596212-63596231 | None:intergenic | 20.0% |
| !! | ATTGTTGATACTATATAATC+TGG | - | chr5.1:63597226-63597245 | MS.gene32468:CDS | 20.0% |
| !! | TACAAAGTCAAAACATAATA+AGG | + | chr5.1:63595750-63595769 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTCTTCCAATGT+AGG | - | chr5.1:63596773-63596792 | MS.gene32468:intron | 20.0% |
| !!! | TGTTTCATTTTAAACATTTC+AGG | - | chr5.1:63598036-63598055 | MS.gene32468:intron | 20.0% |
| !!! | TTATTATGTTTTGACTTTGT+AGG | - | chr5.1:63595749-63595768 | MS.gene32468:CDS | 20.0% |
| !!! | TTCTTACAATTTGTTCAATT+GGG | - | chr5.1:63595991-63596010 | MS.gene32468:intron | 20.0% |
| !!! | TTTCTTACAATTTGTTCAAT+TGG | - | chr5.1:63595990-63596009 | MS.gene32468:intron | 20.0% |
| ! | AAATAAGCTGAAATGGTTTA+TGG | + | chr5.1:63597809-63597828 | None:intergenic | 25.0% |
| ! | AACAAGCAAAAATAGCAAAA+GGG | - | chr5.1:63595483-63595502 | MS.gene32468:CDS | 25.0% |
| ! | AGCAAAACTAATTTCACATT+AGG | + | chr5.1:63597871-63597890 | None:intergenic | 25.0% |
| ! | CTAAAATTTCCTGTTACATA+GGG | + | chr5.1:63596844-63596863 | None:intergenic | 25.0% |
| ! | CTTATGAAAATAAGCTGAAA+TGG | + | chr5.1:63597816-63597835 | None:intergenic | 25.0% |
| ! | GAAACATGTTAATATGAAGT+TGG | + | chr5.1:63598022-63598041 | None:intergenic | 25.0% |
| ! | TTATGTTCTGTTTAGTGTTT+AGG | - | chr5.1:63595653-63595672 | MS.gene32468:CDS | 25.0% |
| ! | TTCGTTTGATTGAAATAGAA+CGG | - | chr5.1:63596321-63596340 | MS.gene32468:CDS | 25.0% |
| ! | TTGATAAAAATGTCTGATCT+TGG | + | chr5.1:63596705-63596724 | None:intergenic | 25.0% |
| !! | AATGCTATTACTAATTTGTG+TGG | - | chr5.1:63595872-63595891 | MS.gene32468:intron | 25.0% |
| !! | TAATGATGTTGTTATTGTTG+TGG | + | chr5.1:63598342-63598361 | None:intergenic | 25.0% |
| !! | TATTACTAATTTGTGTGGTA+TGG | - | chr5.1:63595877-63595896 | MS.gene32468:intron | 25.0% |
| !! | TCTAAAATTTCCTGTTACAT+AGG | + | chr5.1:63596845-63596864 | None:intergenic | 25.0% |
| !! | TTGTTATTGTTGTGGATAAA+TGG | + | chr5.1:63598334-63598353 | None:intergenic | 25.0% |
| !! | TTTTAAACATTTCAGGATGT+TGG | - | chr5.1:63598043-63598062 | MS.gene32468:intron | 25.0% |
| !!! | AGCTGTTTTTGTAAGTTATT+TGG | + | chr5.1:63597844-63597863 | None:intergenic | 25.0% |
| !!! | ATGTTAATATGAAGTTGGTA+GGG | + | chr5.1:63598017-63598036 | None:intergenic | 25.0% |
| !!! | CAAATTTCGAGTTTTCAATT+TGG | + | chr5.1:63596534-63596553 | None:intergenic | 25.0% |
| !!! | GCTGTTTTTGTAAGTTATTT+GGG | + | chr5.1:63597843-63597862 | None:intergenic | 25.0% |
| !!! | GTTAACTTTTTCTTGTGTTA+TGG | - | chr5.1:63595951-63595970 | MS.gene32468:intron | 25.0% |
| AAAGTTCAAACAACGTATCA+TGG | + | chr5.1:63597309-63597328 | None:intergenic | 30.0% | |
| AACGGTCTATATTTCATGTT+TGG | - | chr5.1:63596339-63596358 | MS.gene32468:CDS | 30.0% | |
| AAGTTCAAACAACGTATCAT+GGG | + | chr5.1:63597308-63597327 | None:intergenic | 30.0% | |
| AATCATACAAAGTAGAGAGT+AGG | + | chr5.1:63596263-63596282 | None:intergenic | 30.0% | |
| ACACTAAACAGAACATAACA+AGG | + | chr5.1:63595651-63595670 | None:intergenic | 30.0% | |
| ACATTCAGATAGATTTCCAT+TGG | - | chr5.1:63598165-63598184 | MS.gene32468:intron | 30.0% | |
| ACTCTCTACTTTGTATGATT+AGG | - | chr5.1:63596263-63596282 | MS.gene32468:CDS | 30.0% | |
| AGTATCAGCTCAAAAATTTC+TGG | - | chr5.1:63595608-63595627 | MS.gene32468:CDS | 30.0% | |
| ATCATACAAAGTAGAGAGTA+GGG | + | chr5.1:63596262-63596281 | None:intergenic | 30.0% | |
| ATTGTATCATCAACAGATCT+TGG | - | chr5.1:63597754-63597773 | MS.gene32468:CDS | 30.0% | |
| CATGTGAAAAGAAAGAAAAG+TGG | - | chr5.1:63596071-63596090 | MS.gene32468:intron | 30.0% | |
| CTCTCTACTTTGTATGATTA+GGG | - | chr5.1:63596264-63596283 | MS.gene32468:CDS | 30.0% | |
| CTGAACAGCTAAATAGAAAT+TGG | - | chr5.1:63596487-63596506 | MS.gene32468:CDS | 30.0% | |
| GAACAAGCAAAAATAGCAAA+AGG | - | chr5.1:63595482-63595501 | MS.gene32468:CDS | 30.0% | |
| GAACTGTATTTGGACAATTA+TGG | - | chr5.1:63596032-63596051 | MS.gene32468:intron | 30.0% | |
| TAACATGGTTTCACAGAAAA+AGG | - | chr5.1:63598198-63598217 | MS.gene32468:intron | 30.0% | |
| TATGTGGAAAATCAAACCTT+AGG | + | chr5.1:63597142-63597161 | None:intergenic | 30.0% | |
| TCTTCATTTCCTATTAGGAA+GGG | - | chr5.1:63595509-63595528 | MS.gene32468:CDS | 30.0% | |
| TGATACATGATAGAACGTTA+TGG | - | chr5.1:63597258-63597277 | MS.gene32468:intron | 30.0% | |
| TGGAAATCTATCTGAATGTT+TGG | + | chr5.1:63598164-63598183 | None:intergenic | 30.0% | |
| TTATCATCAACTTGAGAAAC+AGG | + | chr5.1:63595578-63595597 | None:intergenic | 30.0% | |
| TTCTTCATTTCCTATTAGGA+AGG | - | chr5.1:63595508-63595527 | MS.gene32468:CDS | 30.0% | |
| TTGATCAAAATCAGATGACT+CGG | - | chr5.1:63596389-63596408 | MS.gene32468:CDS | 30.0% | |
| ! | AAGATCTCAATCGATTTATG+TGG | + | chr5.1:63597158-63597177 | None:intergenic | 30.0% |
| ! | AATGTAGTTTGACTTAAACC+CGG | + | chr5.1:63597641-63597660 | None:intergenic | 30.0% |
| ! | AGAAAGCTATTCAAGAGTTT+TGG | - | chr5.1:63598078-63598097 | MS.gene32468:CDS | 30.0% |
| ! | CACTTTTCTTTCTTTTCACA+TGG | + | chr5.1:63596073-63596092 | None:intergenic | 30.0% |
| ! | CATGTTAATATGAAGTTGGT+AGG | + | chr5.1:63598018-63598037 | None:intergenic | 30.0% |
| ! | TCTTGAATAGCTTTCTAGTA+TGG | + | chr5.1:63598074-63598093 | None:intergenic | 30.0% |
| ! | TGTTCTGTTCTTTTGCAATT+TGG | + | chr5.1:63598478-63598497 | None:intergenic | 30.0% |
| !! | AGAAATTTTTGAGCTGATAC+TGG | + | chr5.1:63595609-63595628 | None:intergenic | 30.0% |
| !! | AGAGTGTTGTCAAATTATCT+TGG | - | chr5.1:63598391-63598410 | MS.gene32468:CDS | 30.0% |
| !! | TCATTTTGTCTTGCTTTTCA+TGG | + | chr5.1:63598527-63598546 | None:intergenic | 30.0% |
| !! | TTCATCTGATTTGCTACATT+TGG | + | chr5.1:63595543-63595562 | None:intergenic | 30.0% |
| ACCAATGAAAATTTGACAGC+AGG | + | chr5.1:63596443-63596462 | None:intergenic | 35.0% | |
| AGGTAGTAGTAGTACTAGTA+AGG | + | chr5.1:63596588-63596607 | None:intergenic | 35.0% | |
| ATTTAGCTGTTCAGATAGAC+TGG | + | chr5.1:63596481-63596500 | None:intergenic | 35.0% | |
| CAACATGTAGGAACTGTATT+TGG | - | chr5.1:63596022-63596041 | MS.gene32468:intron | 35.0% | |
| CATAAATTGCGGCTTCTAAA+CGG | + | chr5.1:63597457-63597476 | None:intergenic | 35.0% | |
| CCACTAATTAGTCCTTCAAA+GGG | - | chr5.1:63598298-63598317 | MS.gene32468:intron | 35.0% | |
| CCCTACTAAATATATGCACA+CGG | + | chr5.1:63596626-63596645 | None:intergenic | 35.0% | |
| CCGTGTGCATATATTTAGTA+GGG | - | chr5.1:63596623-63596642 | MS.gene32468:intron | 35.0% | |
| CGTTGTTTGAACTTTCAGAA+TGG | - | chr5.1:63597314-63597333 | MS.gene32468:intron | 35.0% | |
| GGAAAATCAAACCTTAGGAA+GGG | + | chr5.1:63597137-63597156 | None:intergenic | 35.0% | |
| GGGTTTAAGTCAAACTACAT+TGG | - | chr5.1:63597640-63597659 | MS.gene32468:intron | 35.0% | |
| GGTAGTAGTAGTACTAGTAA+GGG | + | chr5.1:63596587-63596606 | None:intergenic | 35.0% | |
| GGTCTTCTTCATTTCCTATT+AGG | - | chr5.1:63595504-63595523 | MS.gene32468:CDS | 35.0% | |
| GTGTTGTCAAATTATCTTGG+AGG | - | chr5.1:63598394-63598413 | MS.gene32468:CDS | 35.0% | |
| TAAATTGAGTCCCTGGTTAT+AGG | + | chr5.1:63596420-63596439 | None:intergenic | 35.0% | |
| TACACAATTGCAGCAAAGTA+TGG | + | chr5.1:63595689-63595708 | None:intergenic | 35.0% | |
| TAGAAGCCGCAATTTATGTA+TGG | - | chr5.1:63597459-63597478 | MS.gene32468:intron | 35.0% | |
| TCCGTGTGCATATATTTAGT+AGG | - | chr5.1:63596622-63596641 | MS.gene32468:intron | 35.0% | |
| TGGAAAATCAAACCTTAGGA+AGG | + | chr5.1:63597138-63597157 | None:intergenic | 35.0% | |
| TGTGAAACCATGTTAACCAT+TGG | + | chr5.1:63598193-63598212 | None:intergenic | 35.0% | |
| TTGTTGAGTTAATGCCTTCT+TGG | - | chr5.1:63596134-63596153 | MS.gene32468:intron | 35.0% | |
| TTTAGATAGTTGCACTGCTA+TGG | - | chr5.1:63596859-63596878 | MS.gene32468:CDS | 35.0% | |
| ! | ACCTGCTGTCAAATTTTCAT+TGG | - | chr5.1:63596439-63596458 | MS.gene32468:CDS | 35.0% |
| ! | ATGTAGTTTGACTTAAACCC+GGG | + | chr5.1:63597640-63597659 | None:intergenic | 35.0% |
| ! | TACACTTTTCCCTATGTAAC+AGG | - | chr5.1:63596832-63596851 | MS.gene32468:CDS | 35.0% |
| ! | TCTTTCTTTTCACATGGTAC+AGG | + | chr5.1:63596067-63596086 | None:intergenic | 35.0% |
| !!! | TGTTTTGACTTTGTAGGATC+AGG | - | chr5.1:63595755-63595774 | MS.gene32468:CDS | 35.0% |
| AAAAGGAGTTAGCACTGCAT+TGG | - | chr5.1:63595841-63595860 | MS.gene32468:CDS | 40.0% | |
| AGAAAAGTGGCAGAGAGAAA+TGG | - | chr5.1:63596084-63596103 | MS.gene32468:intron | 40.0% | |
| AGCATGAAACCTTGTTGCAT+TGG | + | chr5.1:63597679-63597698 | None:intergenic | 40.0% | |
| AGGATGACTTTGTAGTCGAA+CGG | + | chr5.1:63597523-63597542 | None:intergenic | 40.0% | |
| ATCATTAAACCTCAACGTCG+TGG | - | chr5.1:63598355-63598374 | MS.gene32468:CDS | 40.0% | |
| ATGTTAACCATTGGAGCCAA+TGG | + | chr5.1:63598184-63598203 | None:intergenic | 40.0% | |
| CTACTACTACCTTTGACAGT+AGG | - | chr5.1:63596596-63596615 | MS.gene32468:intron | 40.0% | |
| CTGATTTCTCTTGCGAAAAG+AGG | + | chr5.1:63596936-63596955 | None:intergenic | 40.0% | |
| GCCACTAATTAGTCCTTCAA+AGG | - | chr5.1:63598297-63598316 | MS.gene32468:intron | 40.0% | |
| GTAGTACTAGTAAGGGATCT+CGG | + | chr5.1:63596580-63596599 | None:intergenic | 40.0% | |
| GTATGTTGACCAAGGAATTG+TGG | - | chr5.1:63596889-63596908 | MS.gene32468:CDS | 40.0% | |
| GTATTTGGATACCCTTCCTA+AGG | - | chr5.1:63597123-63597142 | MS.gene32468:intron | 40.0% | |
| TCAGGATATGTTTGCCAAGA+AGG | + | chr5.1:63596151-63596170 | None:intergenic | 40.0% | |
| TCTAACATGTTCTGTTCTGC+AGG | - | chr5.1:63596665-63596684 | MS.gene32468:intron | 40.0% | |
| TCTTGGCAAACATATCCTGA+TGG | - | chr5.1:63596151-63596170 | MS.gene32468:intron | 40.0% | |
| TTCGACTACAAAGTCATCCT+GGG | - | chr5.1:63597523-63597542 | MS.gene32468:intron | 40.0% | |
| TTGACTTTGTAGGATCAGGA+GGG | - | chr5.1:63595759-63595778 | MS.gene32468:CDS | 40.0% | |
| TTGCAAGATCCAATGCAACA+AGG | - | chr5.1:63597667-63597686 | MS.gene32468:intron | 40.0% | |
| TTGTAGTCATGTCAACGCAT+TGG | - | chr5.1:63596291-63596310 | MS.gene32468:CDS | 40.0% | |
| ! | ACATGGCTGCTTTCAGTATT+TGG | + | chr5.1:63597060-63597079 | None:intergenic | 40.0% |
| ! | ACTCGGATTTTCCTATAACC+AGG | - | chr5.1:63596406-63596425 | MS.gene32468:CDS | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | + | chr5.1:63597077-63597096 | None:intergenic | 40.0% |
| ! | ATTGGCTCCAATGGTTAACA+TGG | - | chr5.1:63598183-63598202 | MS.gene32468:intron | 40.0% |
| ! | CAGCATTGCTTTAGATGACA+TGG | - | chr5.1:63597087-63597106 | MS.gene32468:intron | 40.0% |
| ! | CCCTTTGAAGGACTAATTAG+TGG | + | chr5.1:63598301-63598320 | None:intergenic | 40.0% |
| ! | CTCGGATTTTCCTATAACCA+GGG | - | chr5.1:63596407-63596426 | MS.gene32468:CDS | 40.0% |
| ! | CTTTTCGCAAGAGAAATCAG+CGG | - | chr5.1:63596936-63596955 | MS.gene32468:CDS | 40.0% |
| ! | TACCAAGAACTAGCCTACAT+TGG | + | chr5.1:63596789-63596808 | None:intergenic | 40.0% |
| ! | TGCTTGGTGAAGATATGTCA+GGG | - | chr5.1:63595813-63595832 | MS.gene32468:CDS | 40.0% |
| ! | TTCCAATGTAGGCTAGTTCT+TGG | - | chr5.1:63596784-63596803 | MS.gene32468:intron | 40.0% |
| ! | TTTGACTTTGTAGGATCAGG+AGG | - | chr5.1:63595758-63595777 | MS.gene32468:CDS | 40.0% |
| !! | AAGGGTATCCAAATACGACT+CGG | + | chr5.1:63597119-63597138 | None:intergenic | 40.0% |
| !! | ATGGATTGGCTTCTTTGTGT+TGG | - | chr5.1:63596103-63596122 | MS.gene32468:intron | 40.0% |
| !! | CTGGTGCCATACATAAATTG+CGG | + | chr5.1:63597468-63597487 | None:intergenic | 40.0% |
| !! | GAGTTTTGGTATGTTGACCA+AGG | - | chr5.1:63596881-63596900 | MS.gene32468:CDS | 40.0% |
| !! | TAGATTTCCATTGGCTCCAA+TGG | - | chr5.1:63598174-63598193 | MS.gene32468:intron | 40.0% |
| !! | TGGGATTTGTTGCAACATGT+AGG | - | chr5.1:63596010-63596029 | MS.gene32468:intron | 40.0% |
| !!! | TTCAAGAGTTTTGGAGAGCA+TGG | - | chr5.1:63598087-63598106 | MS.gene32468:CDS | 40.0% |
| AAACCTCAACGTCGTGGTTT+CGG | - | chr5.1:63598361-63598380 | MS.gene32468:CDS | 45.0% | |
| ACTTTGTAGTCGAACGGCTA+GGG | + | chr5.1:63597517-63597536 | None:intergenic | 45.0% | |
| AGGTTTGCGAAGTTACTGCT+TGG | - | chr5.1:63595797-63595816 | MS.gene32468:CDS | 45.0% | |
| AGTGGCAGAGAGAAATGGAT+TGG | - | chr5.1:63596089-63596108 | MS.gene32468:intron | 45.0% | |
| ATCAGGAGGGGATATGATGA+AGG | - | chr5.1:63595772-63595791 | MS.gene32468:CDS | 45.0% | |
| CAGAATGGAAGAACGTGCTT+GGG | - | chr5.1:63597329-63597348 | MS.gene32468:intron | 45.0% | |
| CTCAAGTGCAACATGCTCAT+TGG | + | chr5.1:63597426-63597445 | None:intergenic | 45.0% | |
| GAAGGACTAATTAGTGGCAC+AGG | + | chr5.1:63598295-63598314 | None:intergenic | 45.0% | |
| GACATAGTGCCCTTCCTAAT+AGG | + | chr5.1:63595521-63595540 | None:intergenic | 45.0% | |
| GAGGGGATATGATGAAGGAA+AGG | - | chr5.1:63595777-63595796 | MS.gene32468:CDS | 45.0% | |
| GATATGTCAGGGTCTGGAAA+AGG | - | chr5.1:63595824-63595843 | MS.gene32468:CDS | 45.0% | |
| GGACATTGTGAAGGACTTCA+TGG | - | chr5.1:63597544-63597563 | MS.gene32468:intron | 45.0% | |
| GGAGTTATCTCTCCCTTTGA+AGG | + | chr5.1:63598313-63598332 | None:intergenic | 45.0% | |
| GTGAAGGACTTCATGGTTGA+TGG | - | chr5.1:63597551-63597570 | MS.gene32468:intron | 45.0% | |
| GTTCGACTACAAAGTCATCC+TGG | - | chr5.1:63597522-63597541 | MS.gene32468:intron | 45.0% | |
| TCAGAATGGAAGAACGTGCT+TGG | - | chr5.1:63597328-63597347 | MS.gene32468:intron | 45.0% | |
| TCCTGATGGTAGTAAGCTAG+AGG | - | chr5.1:63596165-63596184 | MS.gene32468:intron | 45.0% | |
| TCTTGAGTTCTCACTGAGAC+CGG | + | chr5.1:63597005-63597024 | None:intergenic | 45.0% | |
| TGACTTTGTAGGATCAGGAG+GGG | - | chr5.1:63595760-63595779 | MS.gene32468:CDS | 45.0% | |
| TTGTCGAGTTTACGTAGAGC+TGG | + | chr5.1:63596732-63596751 | None:intergenic | 45.0% | |
| ! | AATGGGTCTTGTAGTTCCAC+TGG | - | chr5.1:63595437-63595456 | MS.gene32468:CDS | 45.0% |
| ! | ACCTCTAGCTTACTACCATC+AGG | + | chr5.1:63596169-63596188 | None:intergenic | 45.0% |
| ! | AGGGTATCCAAATACGACTC+GGG | + | chr5.1:63597118-63597137 | None:intergenic | 45.0% |
| ! | CTGCTTGGTGAAGATATGTC+AGG | - | chr5.1:63595812-63595831 | MS.gene32468:CDS | 45.0% |
| ! | GTGGTTTAGAGTGAGATCTC+TGG | + | chr5.1:63597487-63597506 | None:intergenic | 45.0% |
| ! | GTTGCACTGCTATGGAGTTT+TGG | - | chr5.1:63596867-63596886 | MS.gene32468:CDS | 45.0% |
| ATCTGAGCAACACGATCCAG+TGG | + | chr5.1:63595456-63595475 | None:intergenic | 50.0% | |
| ATTGTGGCACCAGATGCAGA+TGG | - | chr5.1:63596905-63596924 | MS.gene32468:CDS | 50.0% | |
| CAAGAGAAATCAGCGGCAAG+AGG | - | chr5.1:63596943-63596962 | MS.gene32468:CDS | 50.0% | |
| CAGCAGGTAAATTGAGTCCC+TGG | + | chr5.1:63596427-63596446 | None:intergenic | 50.0% | |
| GAAGTCCTTCACAATGTCCC+AGG | + | chr5.1:63597543-63597562 | None:intergenic | 50.0% | |
| GACTTTGTAGTCGAACGGCT+AGG | + | chr5.1:63597518-63597537 | None:intergenic | 50.0% | |
| GCAAGCACTCTTGAGAGAAC+TGG | + | chr5.1:63597385-63597404 | None:intergenic | 50.0% | |
| GCACTCTTGAGAGAACTGGT+CGG | + | chr5.1:63597381-63597400 | None:intergenic | 50.0% | |
| GGAAGTTCCCGAGTCGTATT+TGG | - | chr5.1:63597108-63597127 | MS.gene32468:intron | 50.0% | |
| GGTGAAGATATGTCAGGGTC+TGG | - | chr5.1:63595818-63595837 | MS.gene32468:CDS | 50.0% | |
| GTCATCCTGGGACATTGTGA+AGG | - | chr5.1:63597535-63597554 | MS.gene32468:intron | 50.0% | |
| TTCATTGAAGCAGCGCTTCC+CGG | - | chr5.1:63597619-63597638 | MS.gene32468:intron | 50.0% | |
| ! | CACGGATTGCCTACTGTCAA+AGG | + | chr5.1:63596608-63596627 | None:intergenic | 50.0% |
| !! | CATCTGGTGCCACAATTCCT+TGG | + | chr5.1:63596901-63596920 | None:intergenic | 50.0% |
| ACACCGAAACCACGACGTTG+AGG | + | chr5.1:63598367-63598386 | None:intergenic | 55.0% | |
| ATCAGCGGCAAGAGGAGAAG+TGG | - | chr5.1:63596951-63596970 | MS.gene32468:CDS | 55.0% | |
| GAGGCTGATCCATCTGCATC+TGG | + | chr5.1:63596917-63596936 | None:intergenic | 55.0% | |
| TCATTGAAGCAGCGCTTCCC+GGG | - | chr5.1:63597620-63597639 | MS.gene32468:intron | 55.0% | |
| AGCGGCAAGAGGAGAAGTGG+TGG | - | chr5.1:63596954-63596973 | MS.gene32468:CDS | 60.0% | |
| GAACGGCTAGGGTAGAGTGG+TGG | + | chr5.1:63597506-63597525 | None:intergenic | 60.0% | |
| GAGTTCTCACTGAGACCGGC+AGG | + | chr5.1:63597001-63597020 | None:intergenic | 60.0% | |
| GTCGAACGGCTAGGGTAGAG+TGG | + | chr5.1:63597509-63597528 | None:intergenic | 60.0% | |
| TTCTCACTGAGACCGGCAGG+AGG | + | chr5.1:63596998-63597017 | None:intergenic | 60.0% | |
| ! | CAGGAGGCACACGGGGTACT+GGG | + | chr5.1:63596982-63597001 | None:intergenic | 65.0% |
| ! | TGAGACCGGCAGGAGGCACA+CGG | + | chr5.1:63596991-63597010 | None:intergenic | 65.0% |
| GTACCCCGTGTGCCTCCTGC+CGG | - | chr5.1:63596983-63597002 | MS.gene32468:CDS | 70.0% | |
| ! | AGACCGGCAGGAGGCACACG+GGG | + | chr5.1:63596989-63597008 | None:intergenic | 70.0% |
| ! | GAGACCGGCAGGAGGCACAC+GGG | + | chr5.1:63596990-63597009 | None:intergenic | 70.0% |
| ! | GCAGGAGGCACACGGGGTAC+TGG | + | chr5.1:63596983-63597002 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 63595392 | 63598546 | 63595392 | ID=MS.gene32468 |
| chr5.1 | mRNA | 63595392 | 63598546 | 63595392 | ID=MS.gene32468.t1;Parent=MS.gene32468 |
| chr5.1 | exon | 63598309 | 63598546 | 63598309 | ID=MS.gene32468.t1.exon1;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63598309 | 63598546 | 63598309 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63598045 | 63598161 | 63598045 | ID=MS.gene32468.t1.exon2;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63598045 | 63598161 | 63598045 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63597752 | 63597906 | 63597752 | ID=MS.gene32468.t1.exon3;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63597752 | 63597906 | 63597752 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63597177 | 63597251 | 63597177 | ID=MS.gene32468.t1.exon4;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63597177 | 63597251 | 63597177 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63596794 | 63597084 | 63596794 | ID=MS.gene32468.t1.exon5;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63596794 | 63597084 | 63596794 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63596250 | 63596606 | 63596250 | ID=MS.gene32468.t1.exon6;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63596250 | 63596606 | 63596250 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| chr5.1 | exon | 63595392 | 63595880 | 63595392 | ID=MS.gene32468.t1.exon7;Parent=MS.gene32468.t1 |
| chr5.1 | CDS | 63595392 | 63595880 | 63595392 | ID=cds.MS.gene32468.t1;Parent=MS.gene32468.t1 |
| Gene Sequence |
| Protein sequence |
