Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90906.t1 | XP_003592861.2 | 97.5 | 634 | 15 | 1 | 1 | 633 | 1 | 634 | 0.00E+00 | 1224.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90906.t1 | Q9FQ08 | 63.1 | 626 | 218 | 5 | 10 | 633 | 7 | 621 | 5.0e-228 | 792.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90906.t1 | G7ICA9 | 97.5 | 634 | 15 | 1 | 1 | 633 | 1 | 634 | 0.0e+00 | 1224.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene90906 | 0.85522 | 7.30E-62 | -1.69E-46 |
| MS.gene049254 | MS.gene90906 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene90906 | 0.822729 | 2.03E-53 | -1.69E-46 |
| MS.gene049501 | MS.gene90906 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene90906 | 0.80353 | 3.34E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene90906 | 0.838171 | 3.37E-57 | -1.69E-46 |
| MS.gene049824 | MS.gene90906 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene90906 | 0.843736 | 1.17E-58 | -1.69E-46 |
| MS.gene050156 | MS.gene90906 | 0.816392 | 5.66E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene90906 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene90906 | 0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene90906 | 0.826016 | 3.42E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene90906 | 0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene90906 | 0.828331 | 9.54E-55 | -1.69E-46 |
| MS.gene051700 | MS.gene90906 | 0.815107 | 1.10E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene90906 | 0.82717 | 1.81E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene90906 | 0.828903 | 6.94E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene90906 | 0.845348 | 4.30E-59 | -1.69E-46 |
| MS.gene052020 | MS.gene90906 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene052311 | MS.gene90906 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene90906 | 0.802484 | 5.49E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene90906 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene90906 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene90906 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene90906 | 0.824647 | 7.21E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene90906 | 0.802321 | 5.93E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene90906 | 0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene90906 | 0.849411 | 3.29E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene90906 | 0.824483 | 7.88E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene90906 | 0.856325 | 3.47E-62 | -1.69E-46 |
| MS.gene05364 | MS.gene90906 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene90906 | 0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene90906 | 0.834169 | 3.50E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene90906 | 0.80692 | 6.51E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene90906 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene054775 | MS.gene90906 | 0.810305 | 1.23E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene90906 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene90906 | 0.840315 | 9.37E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene90906 | 0.841166 | 5.60E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene90906 | 0.837245 | 5.82E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene90906 | 0.825637 | 4.21E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene90906 | 0.833399 | 5.45E-56 | -1.69E-46 |
| MS.gene055537 | MS.gene90906 | 0.81855 | 1.85E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene90906 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene90906 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene90906 | 0.81922 | 1.30E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene90906 | 0.810383 | 1.18E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene90906 | 0.81668 | 4.88E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene90906 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene90906 | 0.800326 | 1.52E-48 | -1.69E-46 |
| MS.gene057360 | MS.gene90906 | 0.819944 | 8.90E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene90906 | 0.843223 | 1.60E-58 | -1.69E-46 |
| MS.gene058625 | MS.gene90906 | 0.827906 | 1.21E-54 | -1.69E-46 |
| MS.gene058636 | MS.gene90906 | 0.818147 | 2.28E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene90906 | 0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene90906 | 0.827884 | 1.22E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene90906 | 0.834379 | 3.10E-56 | -1.69E-46 |
| MS.gene059084 | MS.gene90906 | 0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene90906 | 0.872003 | 4.44E-67 | -1.69E-46 |
| MS.gene059625 | MS.gene90906 | 0.824733 | 6.88E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene90906 | 0.852168 | 5.51E-61 | -1.69E-46 |
| MS.gene060435 | MS.gene90906 | 0.806493 | 8.01E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene90906 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene90906 | 0.84174 | 3.95E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32832 | MS.gene90906 | PPI |
| MS.gene90906 | MS.gene75567 | PPI |
| MS.gene90906 | MS.gene066960 | PPI |
| MS.gene067039 | MS.gene90906 | PPI |
| MS.gene90906 | MS.gene79126 | PPI |
| MS.gene042871 | MS.gene90906 | PPI |
| MS.gene90906 | MS.gene49838 | PPI |
| MS.gene90906 | MS.gene015034 | PPI |
| MS.gene90906 | MS.gene012829 | PPI |
| MS.gene045227 | MS.gene90906 | PPI |
| MS.gene90906 | MS.gene37440 | PPI |
| MS.gene87898 | MS.gene90906 | PPI |
| MS.gene90906 | MS.gene47284 | PPI |
| MS.gene90906 | MS.gene55626 | PPI |
| MS.gene79799 | MS.gene90906 | PPI |
| MS.gene82109 | MS.gene90906 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90906.t1 | MTR_1g116980 | 97.476 | 634 | 15 | 1 | 1 | 633 | 1 | 634 | 0.0 | 1280 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90906.t1 | AT1G16970 | 63.259 | 626 | 217 | 5 | 10 | 633 | 7 | 621 | 0.0 | 819 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGAATCGTTATTATTT+TGG | 0.127811 | 1.2:-86754805 | None:intergenic |
| GGACACAATCTTCCTGTTTC+TGG | 0.163777 | 1.2:+86767617 | MS.gene90906:CDS |
| ATCCTCTCTACAATGCTATC+TGG | 0.229737 | 1.2:+86755277 | MS.gene90906:CDS |
| CATATTGTACCTGCGCAATA+AGG | 0.235695 | 1.2:-86761959 | None:intergenic |
| AATGTTTCATCTTTGATTTC+AGG | 0.249243 | 1.2:-86766687 | None:intergenic |
| GCTTACCAGGGTTGGTGATT+TGG | 0.272499 | 1.2:-86762438 | None:intergenic |
| CAAGTGATGATCAAATAAAA+AGG | 0.279053 | 1.2:+86762368 | MS.gene90906:CDS |
| GCATATGGCAATTTGATCTA+AGG | 0.291855 | 1.2:-86754969 | None:intergenic |
| TTCCCATATGAGTTAATATT+CGG | 0.307537 | 1.2:-86767661 | None:intergenic |
| CATGTCTTTCAGGATTTGAT+TGG | 0.315339 | 1.2:+86755595 | MS.gene90906:intron |
| ACAAATCAAGATGATCCTTT+TGG | 0.319342 | 1.2:+86755363 | MS.gene90906:CDS |
| TATTACTAATCTTCCTTTGA+AGG | 0.323096 | 1.2:+86757048 | MS.gene90906:CDS |
| TAGCCGAATATTAACTCATA+TGG | 0.334145 | 1.2:+86767658 | MS.gene90906:CDS |
| GAATTCAAGTCCTCTGTATA+CGG | 0.338048 | 1.2:+86767226 | MS.gene90906:CDS |
| GAGTTGAAATATTATCTTAC+AGG | 0.343089 | 1.2:+86767596 | MS.gene90906:CDS |
| TTTAAATTCACAATAGTTGA+TGG | 0.343775 | 1.2:+86756466 | MS.gene90906:CDS |
| TGGGGTGAGCTCGCTGATAC+TGG | 0.348714 | 1.2:+86767358 | MS.gene90906:CDS |
| GAAATACGTAAACACCATTT+AGG | 0.349059 | 1.2:-86755122 | None:intergenic |
| TCATAGAAAATATAATATTC+TGG | 0.351290 | 1.2:-86760414 | None:intergenic |
| GCTTCCTTCTTCCCAGAAAC+AGG | 0.372373 | 1.2:-86767629 | None:intergenic |
| TAACCTCGTCACTGGGATAA+AGG | 0.376712 | 1.2:-86760543 | None:intergenic |
| AAGAATTTACAAGACCTAAA+TGG | 0.378666 | 1.2:+86755108 | MS.gene90906:CDS |
| CGATTCCAACAAAGAATTTG+TGG | 0.378805 | 1.2:+86754817 | MS.gene90906:CDS |
| AGCTGATTTAATCAAGCGTT+TGG | 0.379332 | 1.2:+86762393 | MS.gene90906:CDS |
| GATACGTCAAACGTTTGATC+AGG | 0.384992 | 1.2:-86755492 | None:intergenic |
| AGATAAATCATGTGCATTCC+AGG | 0.390123 | 1.2:-86762163 | None:intergenic |
| GACACAATCTTCCTGTTTCT+GGG | 0.397267 | 1.2:+86767618 | MS.gene90906:CDS |
| CCTGCAGACCAGGAGTGGTC+AGG | 0.405236 | 1.2:+86767194 | MS.gene90906:intron |
| CTGGACAAGCCTTCCTCATC+AGG | 0.406253 | 1.2:-86766711 | None:intergenic |
| GTAAACCACAAATTCTTTGT+TGG | 0.415961 | 1.2:-86754822 | None:intergenic |
| ATATTGTACCTGCGCAATAA+GGG | 0.416801 | 1.2:-86761958 | None:intergenic |
| CTTTCAGGATTTGATTGGCT+TGG | 0.421972 | 1.2:+86755600 | MS.gene90906:intron |
| TTAGTTCGTCCAACTGCTCC+TGG | 0.426762 | 1.2:+86756517 | MS.gene90906:CDS |
| AGATACAGCCAAGGGCAATC+TGG | 0.428200 | 1.2:-86754913 | None:intergenic |
| TAATCTCTCAAGCAGCTTAG+TGG | 0.428314 | 1.2:-86760496 | None:intergenic |
| GTTAACTTTGTAGCCTCAGC+AGG | 0.436260 | 1.2:+86755637 | MS.gene90906:CDS |
| GAAGTGGTAACGAACATGTT+AGG | 0.438871 | 1.2:-86754860 | None:intergenic |
| CGTTTCTTGGAGGCTTCAGT+TGG | 0.440412 | 1.2:-86767289 | None:intergenic |
| GCACCTTCATTGCCCTTCAT+AGG | 0.447649 | 1.2:+86761188 | MS.gene90906:CDS |
| GAGACACTATGCAGTATTGC+AGG | 0.448682 | 1.2:+86766638 | MS.gene90906:CDS |
| TCTAATGCCCTGACCACTCC+TGG | 0.455133 | 1.2:-86767202 | None:intergenic |
| TAGGATGAGGTTATCCAATC+TGG | 0.457752 | 1.2:+86762124 | MS.gene90906:intron |
| GGTCCATGGTACAGCTCAAC+CGG | 0.459841 | 1.2:+86761209 | MS.gene90906:CDS |
| CAGGATTTGATTGGCTTGGA+AGG | 0.462987 | 1.2:+86755604 | MS.gene90906:intron |
| TCTTCCTGTTTCTGGGAAGA+AGG | 0.465621 | 1.2:+86767625 | MS.gene90906:CDS |
| GTATTTCATGTTGCTGAAGA+AGG | 0.467074 | 1.2:+86755138 | MS.gene90906:CDS |
| AGCCAGCATGGTGTCATGTC+CGG | 0.468568 | 1.2:+86755243 | MS.gene90906:CDS |
| GCATTTCAATTTCAGATTGG+AGG | 0.478258 | 1.2:+86756390 | MS.gene90906:intron |
| TAGTTCATCTCGACCTCAAT+TGG | 0.478790 | 1.2:+86761932 | MS.gene90906:CDS |
| GCTAAAGACACACAGGATCT+TGG | 0.483916 | 1.2:+86755438 | MS.gene90906:CDS |
| CTGGGATAAAGGAAAGTTGA+TGG | 0.489595 | 1.2:-86760532 | None:intergenic |
| GCTCAATCTGACCACCAGAT+TGG | 0.491292 | 1.2:-86762138 | None:intergenic |
| CCCTAAAAGATGTAGATGTC+CGG | 0.492151 | 1.2:-86760467 | None:intergenic |
| ACTTTCATTTGTGCTGATAC+CGG | 0.492393 | 1.2:+86757855 | MS.gene90906:CDS |
| CTTGTCATGTCGGATTTGAA+AGG | 0.494218 | 1.2:-86755399 | None:intergenic |
| GCAATAAGGGCGACCAATTG+AGG | 0.497738 | 1.2:-86761945 | None:intergenic |
| TCCTCTCTACAATGCTATCT+GGG | 0.498058 | 1.2:+86755278 | MS.gene90906:CDS |
| AAGAACAGTAACCTCGTCAC+TGG | 0.498647 | 1.2:-86760551 | None:intergenic |
| AATTCAAGTCCTCTGTATAC+GGG | 0.498771 | 1.2:+86767227 | MS.gene90906:CDS |
| ATAACATTCATCACCTTCAA+AGG | 0.501406 | 1.2:-86757061 | None:intergenic |
| TTAAATTCACAATAGTTGAT+GGG | 0.505751 | 1.2:+86756467 | MS.gene90906:CDS |
| AGTCTAATGTCATCAGAATA+CGG | 0.508989 | 1.2:-86762187 | None:intergenic |
| AGCCGAATATTAACTCATAT+GGG | 0.509528 | 1.2:+86767659 | MS.gene90906:CDS |
| TCTCACTTCCAGATTGCCCT+TGG | 0.513175 | 1.2:+86754905 | MS.gene90906:CDS |
| TACATACTTGTTTCCTGCTG+AGG | 0.514740 | 1.2:-86755650 | None:intergenic |
| CAGTGTTGTTCTTGTCATGT+CGG | 0.514990 | 1.2:-86755409 | None:intergenic |
| AGAGTGTGAGAACTATGATT+GGG | 0.515732 | 1.2:+86767339 | MS.gene90906:CDS |
| CATTGCCCTTCATAGGTCCA+TGG | 0.517743 | 1.2:+86761195 | MS.gene90906:CDS |
| GAGGAAAGTGAGCTTGGCAC+TGG | 0.519460 | 1.2:+86767262 | MS.gene90906:CDS |
| GGTGGTCAGATTGAGCCGCC+TGG | 0.519634 | 1.2:+86762145 | MS.gene90906:CDS |
| ATTGGTCGCCCTTATTGCGC+AGG | 0.520771 | 1.2:+86761950 | MS.gene90906:CDS |
| GGACCTATGAAGGGCAATGA+AGG | 0.522674 | 1.2:-86761191 | None:intergenic |
| GCTGTACCATGGACCTATGA+AGG | 0.524415 | 1.2:-86761201 | None:intergenic |
| TATGATGAGGAAAGTGAGCT+TGG | 0.525175 | 1.2:+86767256 | MS.gene90906:CDS |
| AGAAAGAATGGATGGTGAAG+AGG | 0.528556 | 1.2:+86754724 | None:intergenic |
| TTTATAAGGATGAAACCGTC+TGG | 0.539775 | 1.2:-86757898 | None:intergenic |
| CTGATGAGGAAGGCTTGTCC+AGG | 0.540037 | 1.2:+86766712 | MS.gene90906:CDS |
| CTGCAGACCAGGAGTGGTCA+GGG | 0.540525 | 1.2:+86767195 | MS.gene90906:intron |
| AGCGTTATTCAGATACTAGT+GGG | 0.545399 | 1.2:+86762332 | MS.gene90906:intron |
| AGGAAGAAGCTTACCAGGGT+TGG | 0.546299 | 1.2:-86762446 | None:intergenic |
| AAGAGTGTGAGAACTATGAT+TGG | 0.546419 | 1.2:+86767338 | MS.gene90906:CDS |
| TTCAGATTCAGAAGAAGAAG+TGG | 0.547042 | 1.2:-86754876 | None:intergenic |
| TTCCGGACATGACACCATGC+TGG | 0.548842 | 1.2:-86755245 | None:intergenic |
| GCTCAAGCACTTCTTCGTAA+AGG | 0.551563 | 1.2:+86755303 | MS.gene90906:CDS |
| TGTTGGTCTGTCAAGATAGT+CGG | 0.552870 | 1.2:-86755163 | None:intergenic |
| TGTTTGATAAGTTTAGCTGT+TGG | 0.553645 | 1.2:-86755180 | None:intergenic |
| AAATGCTTACCAGGAGCAGT+TGG | 0.556970 | 1.2:-86756526 | None:intergenic |
| AGTATTGCAGGCATTAGCTC+TGG | 0.560108 | 1.2:+86766650 | MS.gene90906:CDS |
| AGAATGGATGGTGAAGAGGA+AGG | 0.560673 | 1.2:+86754728 | None:intergenic |
| AGATGAAACATTACCTGATG+AGG | 0.570932 | 1.2:+86766698 | MS.gene90906:CDS |
| ATACGTCAAACGTTTGATCA+GGG | 0.574569 | 1.2:-86755491 | None:intergenic |
| GCAGGCATTAGCTCTGGAAG+AGG | 0.576363 | 1.2:+86766656 | MS.gene90906:CDS |
| AGATTCTTCTATCAATGCAC+CGG | 0.577013 | 1.2:-86757874 | None:intergenic |
| CAGCGTTATTCAGATACTAG+TGG | 0.592622 | 1.2:+86762331 | MS.gene90906:intron |
| AGGGTTTGAGAAAGAATGGA+TGG | 0.598793 | 1.2:+86754716 | None:intergenic |
| TGACATTAGACTTGTTGAAG+AGG | 0.603928 | 1.2:+86762198 | MS.gene90906:CDS |
| GTTGAAGGATTTGACAGTGG+TGG | 0.605755 | 1.2:+86767574 | MS.gene90906:intron |
| GGTCCTTTGAGAGAGCCAAA+AGG | 0.607281 | 1.2:-86755378 | None:intergenic |
| TGAGCTCGCTGATACTGGAA+AGG | 0.617414 | 1.2:+86767363 | MS.gene90906:CDS |
| ACGTTTGATCAGGGAAACTG+AGG | 0.618953 | 1.2:-86755482 | None:intergenic |
| GACGATGAAGACGATCCTGA+TGG | 0.623897 | 1.2:+86754770 | MS.gene90906:CDS |
| GAAATTAAGAGAGTTGCTAC+CGG | 0.624896 | 1.2:+86760448 | MS.gene90906:CDS |
| CGAGTCAGAGATACAGCCAA+GGG | 0.628004 | 1.2:-86754921 | None:intergenic |
| GCGAGTCAGAGATACAGCCA+AGG | 0.630923 | 1.2:-86754922 | None:intergenic |
| GATGTGTAGGAGCAATCACA+TGG | 0.632751 | 1.2:+86757017 | MS.gene90906:intron |
| CGTTTGATCAGGGAAACTGA+GGG | 0.635741 | 1.2:-86755481 | None:intergenic |
| CTGTACCATGGACCTATGAA+GGG | 0.637827 | 1.2:-86761200 | None:intergenic |
| GAAACATTACCTGATGAGGA+AGG | 0.638915 | 1.2:+86766702 | MS.gene90906:CDS |
| GAGTGTGAGAACTATGATTG+GGG | 0.639036 | 1.2:+86767340 | MS.gene90906:CDS |
| ATACCGGTTGAGCTGTACCA+TGG | 0.640613 | 1.2:-86761212 | None:intergenic |
| TACTGCATAGTGTCTCTGCA+AGG | 0.644229 | 1.2:-86766631 | None:intergenic |
| AATCACCTGCAGACCAGGAG+TGG | 0.644588 | 1.2:+86767189 | MS.gene90906:intron |
| AGAACAGTAACCTCGTCACT+GGG | 0.652217 | 1.2:-86760550 | None:intergenic |
| ACCCAGATAGCATTGTAGAG+AGG | 0.656227 | 1.2:-86755279 | None:intergenic |
| TTTCCTTTATCCCAGTGACG+AGG | 0.659770 | 1.2:+86760540 | MS.gene90906:CDS |
| GTATTCCAAATCACCAACCC+TGG | 0.666292 | 1.2:+86762433 | MS.gene90906:CDS |
| TTATTCAGATACTAGTGGGG+TGG | 0.669544 | 1.2:+86762336 | MS.gene90906:CDS |
| TGTTAGGAGATGCATCGACA+AGG | 0.676094 | 1.2:-86754844 | None:intergenic |
| TGATAGAAGAATCTACCAGA+CGG | 0.676569 | 1.2:+86757883 | MS.gene90906:CDS |
| GATGAGGTTATCCAATCTGG+TGG | 0.676798 | 1.2:+86762127 | MS.gene90906:CDS |
| ATAATTCTCCCCGTATACAG+AGG | 0.677348 | 1.2:-86767236 | None:intergenic |
| GCAGAGAGCTAAAGACACAC+AGG | 0.680327 | 1.2:+86755431 | MS.gene90906:CDS |
| GCAGTTGAAGGATTTGACAG+TGG | 0.693560 | 1.2:+86767571 | MS.gene90906:intron |
| ATACGGGGAGAATTATGATG+AGG | 0.697455 | 1.2:+86767243 | MS.gene90906:CDS |
| ATTCAAGTCCTCTGTATACG+GGG | 0.705602 | 1.2:+86767228 | MS.gene90906:CDS |
| TAAATCATGTGCATTCCAGG+CGG | 0.726525 | 1.2:-86762160 | None:intergenic |
| GCGTTATTCAGATACTAGTG+GGG | 0.735980 | 1.2:+86762333 | MS.gene90906:intron |
| GTTTGATCAGGGAAACTGAG+GGG | 0.767489 | 1.2:-86755480 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 86754731 | 86767688 | 86754731 | ID=MS.gene90906 |
| chr1.2 | mRNA | 86754731 | 86767688 | 86754731 | ID=MS.gene90906.t1;Parent=MS.gene90906 |
| chr1.2 | exon | 86754731 | 86755003 | 86754731 | ID=MS.gene90906.t1.exon1;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86754731 | 86755003 | 86754731 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86755099 | 86755527 | 86755099 | ID=MS.gene90906.t1.exon2;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86755099 | 86755527 | 86755099 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86755607 | 86755665 | 86755607 | ID=MS.gene90906.t1.exon3;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86755607 | 86755665 | 86755607 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86756405 | 86756538 | 86756405 | ID=MS.gene90906.t1.exon4;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86756405 | 86756538 | 86756405 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86757026 | 86757069 | 86757026 | ID=MS.gene90906.t1.exon5;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86757026 | 86757069 | 86757026 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86757846 | 86757922 | 86757846 | ID=MS.gene90906.t1.exon6;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86757846 | 86757922 | 86757846 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86760414 | 86760561 | 86760414 | ID=MS.gene90906.t1.exon7;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86760414 | 86760561 | 86760414 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86761169 | 86761230 | 86761169 | ID=MS.gene90906.t1.exon8;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86761169 | 86761230 | 86761169 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86761911 | 86761971 | 86761911 | ID=MS.gene90906.t1.exon9;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86761911 | 86761971 | 86761911 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86762127 | 86762219 | 86762127 | ID=MS.gene90906.t1.exon10;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86762127 | 86762219 | 86762127 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86762334 | 86762454 | 86762334 | ID=MS.gene90906.t1.exon11;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86762334 | 86762454 | 86762334 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86766631 | 86766733 | 86766631 | ID=MS.gene90906.t1.exon12;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86766631 | 86766733 | 86766631 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86767201 | 86767384 | 86767201 | ID=MS.gene90906.t1.exon13;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86767201 | 86767384 | 86767201 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| chr1.2 | exon | 86767575 | 86767688 | 86767575 | ID=MS.gene90906.t1.exon14;Parent=MS.gene90906.t1 |
| chr1.2 | CDS | 86767575 | 86767688 | 86767575 | ID=cds.MS.gene90906.t1;Parent=MS.gene90906.t1 |
| Gene Sequence |
| Protein sequence |
