Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74260.t1 | XP_003592861.2 | 97.6 | 634 | 14 | 1 | 1 | 633 | 1 | 634 | 0.00E+00 | 1225.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74260.t1 | Q9FQ08 | 63.1 | 626 | 218 | 5 | 10 | 633 | 7 | 621 | 5.0e-228 | 792.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74260.t1 | G7ICA9 | 97.6 | 634 | 14 | 1 | 1 | 633 | 1 | 634 | 0.0e+00 | 1225.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene74260 | 0.857477 | 1.59E-62 | -1.69E-46 |
| MS.gene049159 | MS.gene74260 | 0.809488 | 1.85E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene74260 | 0.823221 | 1.56E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene74260 | 0.83271 | 8.09E-56 | -1.69E-46 |
| MS.gene049501 | MS.gene74260 | 0.800427 | 1.45E-48 | -1.69E-46 |
| MS.gene049647 | MS.gene74260 | 0.800533 | 1.38E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene74260 | 0.8071 | 5.96E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene74260 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene74260 | 0.820286 | 7.43E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene74260 | 0.813847 | 2.08E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene74260 | 0.805541 | 1.27E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene74260 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene051700 | MS.gene74260 | 0.833166 | 6.23E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene74260 | 0.806053 | 9.92E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene74260 | 0.804341 | 2.26E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene74260 | 0.82236 | 2.47E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene74260 | 0.819606 | 1.06E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene74260 | 0.825373 | 4.86E-54 | -1.69E-46 |
| MS.gene052012 | MS.gene74260 | 0.802634 | 5.11E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene74260 | 0.800289 | 1.55E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene74260 | 0.80657 | 7.71E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene74260 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene74260 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene74260 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene74260 | 0.810695 | 1.01E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene74260 | 0.812171 | 4.85E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene74260 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene74260 | 0.847651 | 1.01E-59 | -1.69E-46 |
| MS.gene05364 | MS.gene74260 | 0.811406 | 7.11E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene74260 | 0.804877 | 1.75E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene74260 | 0.812724 | 3.67E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene74260 | 0.81488 | 1.23E-51 | -1.69E-46 |
| MS.gene05468 | MS.gene74260 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene054775 | MS.gene74260 | 0.80532 | 1.41E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene74260 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene74260 | 0.81939 | 1.19E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene74260 | 0.836491 | 9.07E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene74260 | 0.832712 | 8.08E-56 | -1.69E-46 |
| MS.gene055469 | MS.gene74260 | 0.80431 | 2.30E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene74260 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene74260 | 0.848376 | 6.37E-60 | -1.69E-46 |
| MS.gene055580 | MS.gene74260 | -0.809287 | 2.04E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene74260 | 0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene74260 | 0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene74260 | -0.809953 | 1.47E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene74260 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene056595 | MS.gene74260 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene74260 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene74260 | 0.829192 | 5.90E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene74260 | 0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene74260 | 0.800726 | 1.26E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene74260 | 0.834388 | 3.08E-56 | -1.69E-46 |
| MS.gene058668 | MS.gene74260 | 0.812181 | 4.82E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene74260 | 0.83863 | 2.57E-57 | -1.69E-46 |
| MS.gene059725 | MS.gene74260 | 0.832331 | 1.00E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene74260 | 0.846131 | 2.63E-59 | -1.69E-46 |
| MS.gene060763 | MS.gene74260 | 0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene74260 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene74260 | 0.803653 | 3.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74260 | MS.gene47284 | PPI |
| MS.gene74260 | MS.gene55626 | PPI |
| MS.gene74260 | MS.gene82109 | PPI |
| MS.gene74260 | MS.gene067039 | PPI |
| MS.gene74260 | MS.gene75567 | PPI |
| MS.gene87898 | MS.gene74260 | PPI |
| MS.gene74260 | MS.gene042871 | PPI |
| MS.gene74260 | MS.gene012829 | PPI |
| MS.gene74260 | MS.gene066960 | PPI |
| MS.gene74260 | MS.gene045227 | PPI |
| MS.gene74260 | MS.gene79126 | PPI |
| MS.gene32832 | MS.gene74260 | PPI |
| MS.gene74260 | MS.gene37440 | PPI |
| MS.gene74260 | MS.gene49838 | PPI |
| MS.gene79799 | MS.gene74260 | PPI |
| MS.gene74260 | MS.gene015034 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74260.t1 | MTR_1g116980 | 97.634 | 634 | 14 | 1 | 1 | 633 | 1 | 634 | 0.0 | 1283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74260.t1 | AT1G16970 | 63.259 | 626 | 217 | 5 | 10 | 633 | 7 | 621 | 0.0 | 821 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGAATCGTTATTATTT+TGG | 0.127811 | 1.1:-82291242 | None:intergenic |
| GGACACAATCTTCCTGTTTC+TGG | 0.163777 | 1.1:+82304171 | MS.gene74260:CDS |
| ATCCTCTCTACAATGCTATC+TGG | 0.229737 | 1.1:+82291714 | MS.gene74260:CDS |
| CATATTGTACCTGCGCAATA+AGG | 0.235695 | 1.1:-82298398 | None:intergenic |
| AATGTTTCATCTTTGATTTC+AGG | 0.249243 | 1.1:-82303241 | None:intergenic |
| GCTTACCAGGGTTGGTGATT+TGG | 0.272499 | 1.1:-82298877 | None:intergenic |
| CAAGTGATGATCAAATAAAA+AGG | 0.279053 | 1.1:+82298807 | MS.gene74260:CDS |
| GCATATGGCAATTTGATCTA+AGG | 0.291855 | 1.1:-82291406 | None:intergenic |
| TTCCCATATGAGTTAATATT+CGG | 0.307537 | 1.1:-82304215 | None:intergenic |
| ACAAATCAAGATGATCCTTT+TGG | 0.319342 | 1.1:+82291800 | MS.gene74260:CDS |
| TATTACTAATCTTCCTTTGA+AGG | 0.323096 | 1.1:+82293485 | MS.gene74260:CDS |
| TAGCCGAATATTAACTCATA+TGG | 0.334145 | 1.1:+82304212 | MS.gene74260:CDS |
| GAATTCAAGTCCTCTGTATA+CGG | 0.338048 | 1.1:+82303780 | MS.gene74260:CDS |
| GAGTTGAAATATTATCTTAC+AGG | 0.343089 | 1.1:+82304150 | MS.gene74260:CDS |
| TTTAAATTCACAATAGTTGA+TGG | 0.343775 | 1.1:+82292903 | MS.gene74260:CDS |
| TGGGGTGAGCTCGCTGATAC+TGG | 0.348714 | 1.1:+82303912 | MS.gene74260:CDS |
| GAAATACGTAAACACCATTT+AGG | 0.349059 | 1.1:-82291559 | None:intergenic |
| TCATAGAAAATATAATATTC+TGG | 0.351290 | 1.1:-82296853 | None:intergenic |
| GCTTCCTTCTTCCCAGAAAC+AGG | 0.372373 | 1.1:-82304183 | None:intergenic |
| TAACCTCGTCACTGGGATAA+AGG | 0.376712 | 1.1:-82296982 | None:intergenic |
| AAGAATTTACAAGACCTAAA+TGG | 0.378666 | 1.1:+82291545 | MS.gene74260:CDS |
| CGATTCCAACAAAGAATTTG+TGG | 0.378805 | 1.1:+82291254 | MS.gene74260:CDS |
| AGCTGATTTAATCAAGCGTT+TGG | 0.379332 | 1.1:+82298832 | MS.gene74260:CDS |
| GATACGTCAAACGTTTGATC+AGG | 0.384992 | 1.1:-82291929 | None:intergenic |
| AGATAAATCATGTGCATTCC+AGG | 0.390123 | 1.1:-82298602 | None:intergenic |
| GACACAATCTTCCTGTTTCT+GGG | 0.397267 | 1.1:+82304172 | MS.gene74260:CDS |
| CCTGCAGACCAGGAGTGGTC+AGG | 0.405236 | 1.1:+82303748 | MS.gene74260:intron |
| CTGGACAAGCCTTCCTCATC+AGG | 0.406253 | 1.1:-82303265 | None:intergenic |
| GTAAACCACAAATTCTTTGT+TGG | 0.415961 | 1.1:-82291259 | None:intergenic |
| ATATTGTACCTGCGCAATAA+GGG | 0.416801 | 1.1:-82298397 | None:intergenic |
| TTAGTTCGTCCAACTGCTCC+TGG | 0.426762 | 1.1:+82292954 | MS.gene74260:CDS |
| AGATACAGCCAAGGGCAATC+TGG | 0.428200 | 1.1:-82291350 | None:intergenic |
| TAATCTCTCAAGCAGCTTAG+TGG | 0.428314 | 1.1:-82296935 | None:intergenic |
| GTTAACTTTGTAGCCTCAGC+AGG | 0.436260 | 1.1:+82292074 | MS.gene74260:CDS |
| GAAGTGGTAACGAACATGTT+AGG | 0.438871 | 1.1:-82291297 | None:intergenic |
| CGTTTCTTGGAGGCTTCAGT+TGG | 0.440412 | 1.1:-82303843 | None:intergenic |
| GCACCTTCATTGCCCTTCAT+AGG | 0.447649 | 1.1:+82297627 | MS.gene74260:CDS |
| GAGACACTATGCAGTATTGC+AGG | 0.448682 | 1.1:+82303192 | MS.gene74260:CDS |
| TCTAATGCCCTGACCACTCC+TGG | 0.455133 | 1.1:-82303756 | None:intergenic |
| TAGGATGAGGTTATCCAATC+TGG | 0.457752 | 1.1:+82298563 | MS.gene74260:intron |
| GGTCCATGGTACAGCTCAAC+CGG | 0.459841 | 1.1:+82297648 | MS.gene74260:CDS |
| TCTTCCTGTTTCTGGGAAGA+AGG | 0.465621 | 1.1:+82304179 | MS.gene74260:CDS |
| GTATTTCATGTTGCTGAAGA+AGG | 0.467074 | 1.1:+82291575 | MS.gene74260:CDS |
| AGCCAGCATGGTGTCATGTC+CGG | 0.468568 | 1.1:+82291680 | MS.gene74260:CDS |
| GCATTTCAATTTCAGATTGG+AGG | 0.478258 | 1.1:+82292827 | MS.gene74260:intron |
| TAGTTCATCTCGACCTCAAT+TGG | 0.478790 | 1.1:+82298371 | MS.gene74260:CDS |
| GCTAAAGACACACAGGATCT+TGG | 0.483916 | 1.1:+82291875 | MS.gene74260:CDS |
| CTGGGATAAAGGAAAGTTGA+TGG | 0.489595 | 1.1:-82296971 | None:intergenic |
| GCTCAATCTGACCACCAGAT+TGG | 0.491292 | 1.1:-82298577 | None:intergenic |
| CCCTAAAAGATGTAGATGTC+CGG | 0.492151 | 1.1:-82296906 | None:intergenic |
| ACTTTCATTTGTGCTGATAC+CGG | 0.492393 | 1.1:+82294292 | MS.gene74260:CDS |
| CTTGTCATGTCGGATTTGAA+AGG | 0.494218 | 1.1:-82291836 | None:intergenic |
| GCAATAAGGGCGACCAATTG+AGG | 0.497738 | 1.1:-82298384 | None:intergenic |
| TCCTCTCTACAATGCTATCT+GGG | 0.498058 | 1.1:+82291715 | MS.gene74260:CDS |
| AAGAACAGTAACCTCGTCAC+TGG | 0.498647 | 1.1:-82296990 | None:intergenic |
| AATTCAAGTCCTCTGTATAC+GGG | 0.498771 | 1.1:+82303781 | MS.gene74260:CDS |
| ATAACATTCATCACCTTCAA+AGG | 0.501406 | 1.1:-82293498 | None:intergenic |
| TTAAATTCACAATAGTTGAT+GGG | 0.505751 | 1.1:+82292904 | MS.gene74260:CDS |
| AGTCTAATGTCATCAGAATA+CGG | 0.508989 | 1.1:-82298626 | None:intergenic |
| AGCCGAATATTAACTCATAT+GGG | 0.509528 | 1.1:+82304213 | MS.gene74260:CDS |
| TCTCACTTCCAGATTGCCCT+TGG | 0.513175 | 1.1:+82291342 | MS.gene74260:CDS |
| TACATACTTGTTTCCTGCTG+AGG | 0.514740 | 1.1:-82292087 | None:intergenic |
| CAGTGTTGTTCTTGTCATGT+CGG | 0.514990 | 1.1:-82291846 | None:intergenic |
| AGAGTGTGAGAACTATGATT+GGG | 0.515732 | 1.1:+82303893 | MS.gene74260:CDS |
| CATTGCCCTTCATAGGTCCA+TGG | 0.517743 | 1.1:+82297634 | MS.gene74260:CDS |
| GAGGAAAGTGAGCTTGGCAC+TGG | 0.519460 | 1.1:+82303816 | MS.gene74260:CDS |
| GGTGGTCAGATTGAGCCGCC+TGG | 0.519634 | 1.1:+82298584 | MS.gene74260:CDS |
| ATTGGTCGCCCTTATTGCGC+AGG | 0.520771 | 1.1:+82298389 | MS.gene74260:CDS |
| TAGGATTTGATTGGCTTGGA+AGG | 0.521114 | 1.1:+82292041 | MS.gene74260:intron |
| GGACCTATGAAGGGCAATGA+AGG | 0.522674 | 1.1:-82297630 | None:intergenic |
| GCTGTACCATGGACCTATGA+AGG | 0.524415 | 1.1:-82297640 | None:intergenic |
| TATGATGAGGAAAGTGAGCT+TGG | 0.525175 | 1.1:+82303810 | MS.gene74260:CDS |
| GCTCAAGCACTTCTTCGTAA+AGG | 0.527397 | 1.1:+82291740 | MS.gene74260:CDS |
| AGAAAGAATGGATGGTGAAG+AGG | 0.528556 | 1.1:+82291161 | None:intergenic |
| TTTATAAGGATGAAACCGTC+TGG | 0.539775 | 1.1:-82294335 | None:intergenic |
| CTGATGAGGAAGGCTTGTCC+AGG | 0.540037 | 1.1:+82303266 | MS.gene74260:CDS |
| CTGCAGACCAGGAGTGGTCA+GGG | 0.540525 | 1.1:+82303749 | MS.gene74260:intron |
| AGCGTTATTCAGATACTAGT+GGG | 0.545399 | 1.1:+82298771 | MS.gene74260:intron |
| AGGAAGAAGCTTACCAGGGT+TGG | 0.546299 | 1.1:-82298885 | None:intergenic |
| AAGAGTGTGAGAACTATGAT+TGG | 0.546419 | 1.1:+82303892 | MS.gene74260:CDS |
| TTCAGATTCAGAAGAAGAAG+TGG | 0.547042 | 1.1:-82291313 | None:intergenic |
| TTCCGGACATGACACCATGC+TGG | 0.548842 | 1.1:-82291682 | None:intergenic |
| TGTTGGTCTGTCAAGATAGT+CGG | 0.552870 | 1.1:-82291600 | None:intergenic |
| TGTTTGATAAGTTTAGCTGT+TGG | 0.553645 | 1.1:-82291617 | None:intergenic |
| AAATGCTTACCAGGAGCAGT+TGG | 0.556970 | 1.1:-82292963 | None:intergenic |
| AGTATTGCAGGCATTAGCTC+TGG | 0.560108 | 1.1:+82303204 | MS.gene74260:CDS |
| AGAATGGATGGTGAAGAGGA+AGG | 0.560673 | 1.1:+82291165 | None:intergenic |
| AGATGAAACATTACCTGATG+AGG | 0.570932 | 1.1:+82303252 | MS.gene74260:CDS |
| ATACGTCAAACGTTTGATCA+GGG | 0.574569 | 1.1:-82291928 | None:intergenic |
| GCAGGCATTAGCTCTGGAAG+AGG | 0.576363 | 1.1:+82303210 | MS.gene74260:CDS |
| AGATTCTTCTATCAATGCAC+CGG | 0.577013 | 1.1:-82294311 | None:intergenic |
| CAGCGTTATTCAGATACTAG+TGG | 0.592622 | 1.1:+82298770 | MS.gene74260:intron |
| AGGGTTTGAGAAAGAATGGA+TGG | 0.598793 | 1.1:+82291153 | None:intergenic |
| GTTGAAGGATTTGACAGTGG+TGG | 0.600623 | 1.1:+82304128 | MS.gene74260:intron |
| TGACATTAGACTTGTTGAAG+AGG | 0.603928 | 1.1:+82298637 | MS.gene74260:CDS |
| GGTCCTTTGAGAGAGCCAAA+AGG | 0.607281 | 1.1:-82291815 | None:intergenic |
| TGAGCTCGCTGATACTGGAA+AGG | 0.617414 | 1.1:+82303917 | MS.gene74260:CDS |
| ACGTTTGATCAGGGAAACTG+AGG | 0.618953 | 1.1:-82291919 | None:intergenic |
| GACGATGAAGACGATCCTGA+TGG | 0.623897 | 1.1:+82291207 | MS.gene74260:CDS |
| GAAATTAAGAGAGTTGCTAC+CGG | 0.624896 | 1.1:+82296887 | MS.gene74260:CDS |
| CGAGTCAGAGATACAGCCAA+GGG | 0.628004 | 1.1:-82291358 | None:intergenic |
| GCGAGTCAGAGATACAGCCA+AGG | 0.630923 | 1.1:-82291359 | None:intergenic |
| GATGTGTAGGAGCAATCACA+TGG | 0.632751 | 1.1:+82293454 | MS.gene74260:intron |
| CGTTTGATCAGGGAAACTGA+GGG | 0.635741 | 1.1:-82291918 | None:intergenic |
| CTGTACCATGGACCTATGAA+GGG | 0.637827 | 1.1:-82297639 | None:intergenic |
| GAAACATTACCTGATGAGGA+AGG | 0.638915 | 1.1:+82303256 | MS.gene74260:CDS |
| GAGTGTGAGAACTATGATTG+GGG | 0.639036 | 1.1:+82303894 | MS.gene74260:CDS |
| ATACCGGTTGAGCTGTACCA+TGG | 0.640613 | 1.1:-82297651 | None:intergenic |
| TACTGCATAGTGTCTCTGCA+AGG | 0.644229 | 1.1:-82303185 | None:intergenic |
| AATCACCTGCAGACCAGGAG+TGG | 0.644588 | 1.1:+82303743 | MS.gene74260:intron |
| AGAACAGTAACCTCGTCACT+GGG | 0.652217 | 1.1:-82296989 | None:intergenic |
| ACCCAGATAGCATTGTAGAG+AGG | 0.656227 | 1.1:-82291716 | None:intergenic |
| TTTCCTTTATCCCAGTGACG+AGG | 0.659770 | 1.1:+82296979 | MS.gene74260:CDS |
| GTAGTTGAAGGATTTGACAG+TGG | 0.661345 | 1.1:+82304125 | MS.gene74260:intron |
| GTATTCCAAATCACCAACCC+TGG | 0.666292 | 1.1:+82298872 | MS.gene74260:CDS |
| TTATTCAGATACTAGTGGGG+TGG | 0.669544 | 1.1:+82298775 | MS.gene74260:CDS |
| TGTTAGGAGATGCATCGACA+AGG | 0.676094 | 1.1:-82291281 | None:intergenic |
| TGATAGAAGAATCTACCAGA+CGG | 0.676569 | 1.1:+82294320 | MS.gene74260:CDS |
| GATGAGGTTATCCAATCTGG+TGG | 0.676798 | 1.1:+82298566 | MS.gene74260:CDS |
| ATAATTCTCCCCGTATACAG+AGG | 0.677348 | 1.1:-82303790 | None:intergenic |
| GCAGAGAGCTAAAGACACAC+AGG | 0.680327 | 1.1:+82291868 | MS.gene74260:CDS |
| ATACGGGGAGAATTATGATG+AGG | 0.697455 | 1.1:+82303797 | MS.gene74260:CDS |
| ATTCAAGTCCTCTGTATACG+GGG | 0.705602 | 1.1:+82303782 | MS.gene74260:CDS |
| TAAATCATGTGCATTCCAGG+CGG | 0.726525 | 1.1:-82298599 | None:intergenic |
| GCGTTATTCAGATACTAGTG+GGG | 0.735980 | 1.1:+82298772 | MS.gene74260:intron |
| GTTTGATCAGGGAAACTGAG+GGG | 0.767489 | 1.1:-82291917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 82291168 | 82304242 | 82291168 | ID=MS.gene74260 |
| chr1.1 | mRNA | 82291168 | 82304242 | 82291168 | ID=MS.gene74260.t1;Parent=MS.gene74260 |
| chr1.1 | exon | 82291168 | 82291440 | 82291168 | ID=MS.gene74260.t1.exon1;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82291168 | 82291440 | 82291168 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82291536 | 82291964 | 82291536 | ID=MS.gene74260.t1.exon2;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82291536 | 82291964 | 82291536 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82292044 | 82292102 | 82292044 | ID=MS.gene74260.t1.exon3;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82292044 | 82292102 | 82292044 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82292842 | 82292975 | 82292842 | ID=MS.gene74260.t1.exon4;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82292842 | 82292975 | 82292842 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82293463 | 82293506 | 82293463 | ID=MS.gene74260.t1.exon5;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82293463 | 82293506 | 82293463 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82294283 | 82294359 | 82294283 | ID=MS.gene74260.t1.exon6;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82294283 | 82294359 | 82294283 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82296853 | 82297000 | 82296853 | ID=MS.gene74260.t1.exon7;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82296853 | 82297000 | 82296853 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82297608 | 82297669 | 82297608 | ID=MS.gene74260.t1.exon8;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82297608 | 82297669 | 82297608 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82298350 | 82298410 | 82298350 | ID=MS.gene74260.t1.exon9;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82298350 | 82298410 | 82298350 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82298566 | 82298658 | 82298566 | ID=MS.gene74260.t1.exon10;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82298566 | 82298658 | 82298566 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82298773 | 82298893 | 82298773 | ID=MS.gene74260.t1.exon11;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82298773 | 82298893 | 82298773 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82303185 | 82303287 | 82303185 | ID=MS.gene74260.t1.exon12;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82303185 | 82303287 | 82303185 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82303755 | 82303938 | 82303755 | ID=MS.gene74260.t1.exon13;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82303755 | 82303938 | 82303755 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| chr1.1 | exon | 82304129 | 82304242 | 82304129 | ID=MS.gene74260.t1.exon14;Parent=MS.gene74260.t1 |
| chr1.1 | CDS | 82304129 | 82304242 | 82304129 | ID=cds.MS.gene74260.t1;Parent=MS.gene74260.t1 |
| Gene Sequence |
| Protein sequence |
