Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33483.t1 | XP_003604630.1 | 99.3 | 436 | 3 | 0 | 1 | 436 | 75 | 510 | 1.90E-249 | 871.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33483.t1 | Q8S4F6 | 71.4 | 433 | 122 | 1 | 4 | 434 | 75 | 507 | 9.3e-181 | 634.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33483.t1 | G7JN01 | 99.3 | 436 | 3 | 0 | 1 | 436 | 75 | 510 | 1.3e-249 | 871.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene33483 | 0.808006 | 3.83E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene33483 | 0.828891 | 6.99E-55 | -1.69E-46 |
| MS.gene050284 | MS.gene33483 | -0.813763 | 2.17E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene33483 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene33483 | 0.809644 | 1.71E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene33483 | 0.819169 | 1.34E-52 | -1.69E-46 |
| MS.gene051935 | MS.gene33483 | 0.819449 | 1.15E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene33483 | 0.821467 | 3.98E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene33483 | 0.808628 | 2.82E-50 | -1.69E-46 |
| MS.gene052746 | MS.gene33483 | 0.89374 | 4.74E-75 | -1.69E-46 |
| MS.gene054222 | MS.gene33483 | 0.821403 | 4.11E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene33483 | 0.811578 | 6.53E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene33483 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene33483 | 0.809111 | 2.22E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene33483 | 0.821422 | 4.07E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene33483 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene058897 | MS.gene33483 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene060012 | MS.gene33483 | 0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene33483 | 0.811854 | 5.69E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33483.t1 | MTR_4g015260 | 99.312 | 436 | 3 | 0 | 1 | 436 | 75 | 510 | 0.0 | 893 |
| MS.gene33483.t1 | MTR_4g015260 | 99.467 | 375 | 2 | 0 | 62 | 436 | 1 | 375 | 0.0 | 764 |
| MS.gene33483.t1 | MTR_7g067340 | 83.252 | 412 | 69 | 0 | 24 | 435 | 101 | 512 | 0.0 | 724 |
| MS.gene33483.t1 | MTR_4g015250 | 68.000 | 50 | 11 | 1 | 379 | 423 | 1 | 50 | 5.08e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33483.t1 | AT5G01220 | 74.596 | 433 | 108 | 1 | 4 | 434 | 75 | 507 | 0.0 | 685 |
| MS.gene33483.t1 | AT5G01220 | 76.420 | 352 | 81 | 1 | 4 | 353 | 75 | 426 | 0.0 | 563 |
Find 96 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTACAATACTGCTATT+TGG | 0.201513 | 4.3:+83204992 | MS.gene33483:CDS |
| GTCTCAGAGGCTCTGTCTTC+AGG | 0.203326 | 4.3:+83204745 | MS.gene33483:CDS |
| GAAGATCAAGATGGCAAAAT+TGG | 0.239959 | 4.3:+83204817 | MS.gene33483:CDS |
| ACAATACTGCTATTTGGTTT+TGG | 0.272252 | 4.3:+83204998 | MS.gene33483:CDS |
| TGATCTTCGGTGATTATGTC+TGG | 0.304902 | 4.3:-83204802 | None:intergenic |
| TATAAAGTACCTTCGAGAAA+TGG | 0.321891 | 4.3:+83201262 | MS.gene33483:CDS |
| ATGAAAGAAACTCACGAAAA+AGG | 0.328278 | 4.3:-83200047 | None:intergenic |
| CAGCTAACAAGATCCGTCTT+TGG | 0.335760 | 4.3:+83203336 | MS.gene33483:intron |
| ACAATAGCGATTCGTGCTTC+AGG | 0.349145 | 4.3:-83204017 | None:intergenic |
| CGCATCATCACCTGGCATAA+TGG | 0.349858 | 4.3:+83202120 | MS.gene33483:CDS |
| ATTTCATGTGACTTGTACTT+AGG | 0.354414 | 4.3:-83203389 | None:intergenic |
| TTCCTAGATACACATTTAGT+TGG | 0.367508 | 4.3:+83202762 | MS.gene33483:CDS |
| TCTCAGAGGCTCTGTCTTCA+GGG | 0.381353 | 4.3:+83204746 | MS.gene33483:CDS |
| TCAATTACCTATACAACTTC+GGG | 0.383739 | 4.3:-83205084 | None:intergenic |
| TGTGCTCCATAAAATTCTTT+CGG | 0.394473 | 4.3:-83201530 | None:intergenic |
| ATTATTCATGTTGGGCGTCT+TGG | 0.399379 | 4.3:+83203531 | MS.gene33483:CDS |
| TGAATAATCAAGGGCTTCTC+TGG | 0.401493 | 4.3:-83203516 | None:intergenic |
| AGCCCTTGATTATTCATGTT+GGG | 0.416627 | 4.3:+83203523 | MS.gene33483:CDS |
| ATAAAGTACCTTCGAGAAAT+GGG | 0.417934 | 4.3:+83201263 | MS.gene33483:CDS |
| GTCTTCAGGGATTCCTGTTG+TGG | 0.423339 | 4.3:+83204759 | MS.gene33483:CDS |
| ATATCATTCAAAACAGAATC+AGG | 0.424694 | 4.3:-83199981 | None:intergenic |
| CCGGCACGTGCGCCCACAAC+AGG | 0.441624 | 4.3:-83204772 | None:intergenic |
| GAAGCACGAATCGCTATTGT+TGG | 0.443160 | 4.3:+83204020 | MS.gene33483:CDS |
| CACAATTAATTGGATCCAAA+AGG | 0.443175 | 4.3:+83201549 | MS.gene33483:CDS |
| AAAAGCCGCACGTATAGAAA+TGG | 0.444036 | 4.3:+83204927 | MS.gene33483:CDS |
| AAATATGTTTCGTTAGCCAT+TGG | 0.444300 | 4.3:-83205053 | None:intergenic |
| GAGCTAGAGAAATTGTTAGA+AGG | 0.445162 | 4.3:+83204613 | MS.gene33483:CDS |
| TTCAATTACCTATACAACTT+CGG | 0.448232 | 4.3:-83205085 | None:intergenic |
| CCTGTTGTGGGCGCACGTGC+CGG | 0.452177 | 4.3:+83204772 | MS.gene33483:CDS |
| TCTTCAGGGATTCCTGTTGT+GGG | 0.460643 | 4.3:+83204760 | MS.gene33483:CDS |
| GATCTTCGGTGATTATGTCT+GGG | 0.471115 | 4.3:-83204801 | None:intergenic |
| ATGTAACTTACACTGGTACA+TGG | 0.476399 | 4.3:-83202474 | None:intergenic |
| GCAACCGCTGAAATTATTCT+CGG | 0.493591 | 4.3:-83202073 | None:intergenic |
| ACCTTCTGATACCAAGGAAA+AGG | 0.494486 | 4.3:-83202028 | None:intergenic |
| AGCCAACTAAATGTGTATCT+AGG | 0.495411 | 4.3:-83202764 | None:intergenic |
| AATGGAGAAGTATGACTGGA+GGG | 0.497567 | 4.3:+83204945 | MS.gene33483:CDS |
| AACATTCCTGTGAATACTAC+AGG | 0.502930 | 4.3:-83204640 | None:intergenic |
| ACGCCCAACATGAATAATCA+AGG | 0.504182 | 4.3:-83203526 | None:intergenic |
| AAGCAATCGTCGAGATCACC+TGG | 0.504324 | 4.3:-83204853 | None:intergenic |
| TATTCACAGGAATGTTAAGC+GGG | 0.510418 | 4.3:+83204647 | MS.gene33483:CDS |
| CCTATACAACTTCGGGAGAC+GGG | 0.510470 | 4.3:-83205077 | None:intergenic |
| CTAGTGCCATCCGTTGCCAT+TGG | 0.511144 | 4.3:+83202936 | MS.gene33483:CDS |
| GAAGAAGCTAGAGTAACAAC+AGG | 0.518580 | 4.3:+83202969 | MS.gene33483:CDS |
| TTCAGAGTATGTTACCTGTA+GGG | 0.520308 | 4.3:-83204050 | None:intergenic |
| ACCTATACAACTTCGGGAGA+CGG | 0.521685 | 4.3:-83205078 | None:intergenic |
| CGAATCGCTATTGTTGGAGA+TGG | 0.527504 | 4.3:+83204026 | MS.gene33483:CDS |
| GTATGATATGACATAACAAT+GGG | 0.528218 | 4.3:-83202451 | None:intergenic |
| CAAGATCCGTCTTTGGAACA+AGG | 0.529732 | 4.3:+83203343 | MS.gene33483:CDS |
| AAGCCCTTGATTATTCATGT+TGG | 0.533594 | 4.3:+83203522 | MS.gene33483:CDS |
| ATTGGATATCTCTACACTCC+AGG | 0.535829 | 4.3:+83204835 | MS.gene33483:CDS |
| TGCAAACATACCATTATGCC+AGG | 0.542884 | 4.3:-83202130 | None:intergenic |
| AACTATTGTTACCGTTCCAA+TGG | 0.544153 | 4.3:+83205037 | MS.gene33483:CDS |
| CGGACTAAGTGCCAAGGAGA+GGG | 0.545703 | 4.3:-83202053 | None:intergenic |
| GTTGTGGGCGCACGTGCCGG+TGG | 0.550499 | 4.3:+83204775 | MS.gene33483:CDS |
| GACAACTTGACCAAGTGTCT+CGG | 0.550994 | 4.3:-83204725 | None:intergenic |
| TGTAACTTACACTGGTACAT+GGG | 0.551422 | 4.3:-83202473 | None:intergenic |
| GATGATGCGTGTATTATGTC+AGG | 0.553406 | 4.3:-83202106 | None:intergenic |
| TCAGAAGGTACCCCTCTCCT+TGG | 0.553771 | 4.3:+83202042 | MS.gene33483:CDS |
| GGCATGCCTGTAGTATTCAC+AGG | 0.556036 | 4.3:+83204634 | MS.gene33483:CDS |
| CACACGACTTTGCAGTGTCA+TGG | 0.562589 | 4.3:+83203986 | MS.gene33483:intron |
| CCGTCAGAGTCCGAGACACT+TGG | 0.566913 | 4.3:+83204715 | MS.gene33483:CDS |
| TAGAAATGGAGAAGTATGAC+TGG | 0.568964 | 4.3:+83204941 | MS.gene33483:CDS |
| CTTCTCCATTTCTATACGTG+CGG | 0.572187 | 4.3:-83204932 | None:intergenic |
| GCTAGTGCAACCAATGTGGT+TGG | 0.577453 | 4.3:+83202784 | MS.gene33483:CDS |
| ATAATACACGCATCATCACC+TGG | 0.577775 | 4.3:+83202112 | MS.gene33483:CDS |
| AGGGGTACCTTCTGATACCA+AGG | 0.581471 | 4.3:-83202034 | None:intergenic |
| CGTAGAGTTGAGAGAAACGA+TGG | 0.586580 | 4.3:+83204903 | MS.gene33483:CDS |
| AATTCTAGAGATGAAGAAGA+TGG | 0.586706 | 4.3:+83199954 | MS.gene33483:CDS |
| TTGTTGGAGATGGACCCTAC+AGG | 0.587255 | 4.3:+83204036 | MS.gene33483:CDS |
| GGTATGATATGACATAACAA+TGG | 0.590253 | 4.3:-83202452 | None:intergenic |
| GACTTTGCAGTGTCATGGAT+AGG | 0.595761 | 4.3:+83203991 | MS.gene33483:intron |
| CCTCATCTCCCATTTCTCGA+AGG | 0.599834 | 4.3:-83201271 | None:intergenic |
| CAACACCCTTGTTCCAAAGA+CGG | 0.603176 | 4.3:-83203349 | None:intergenic |
| AAATGGAGAAGTATGACTGG+AGG | 0.604480 | 4.3:+83204944 | MS.gene33483:CDS |
| GATTATGTCTGGGATTCCAC+CGG | 0.604568 | 4.3:-83204791 | None:intergenic |
| CCTTCGAGAAATGGGAGATG+AGG | 0.605105 | 4.3:+83201271 | MS.gene33483:CDS |
| CGCCCAACATGAATAATCAA+GGG | 0.606295 | 4.3:-83203525 | None:intergenic |
| TCGGACTAAGTGCCAAGGAG+AGG | 0.624278 | 4.3:-83202054 | None:intergenic |
| ATGGTCGTGACAACACATGA+AGG | 0.624957 | 4.3:+83201503 | MS.gene33483:CDS |
| TATTCTCGGACTAAGTGCCA+AGG | 0.627907 | 4.3:-83202059 | None:intergenic |
| TGTTTCGTTAGCCATTGGAA+CGG | 0.629285 | 4.3:-83205048 | None:intergenic |
| TAGTCCGAGAATAATTTCAG+CGG | 0.636839 | 4.3:+83202069 | MS.gene33483:CDS |
| AACTCTACGTCATGCAACAG+AGG | 0.641063 | 4.3:-83204889 | None:intergenic |
| TTATCTCAAGCATATGCTAG+TGG | 0.642840 | 4.3:+83204676 | MS.gene33483:CDS |
| GGACTAAGTGCCAAGGAGAG+GGG | 0.646296 | 4.3:-83202052 | None:intergenic |
| ATACTTAGAACCAACCACAT+TGG | 0.648026 | 4.3:-83202794 | None:intergenic |
| CCAAGTGTCTCGGACTCTGA+CGG | 0.649173 | 4.3:-83204715 | None:intergenic |
| ATAATCACCGAAGATCAAGA+TGG | 0.654411 | 4.3:+83204808 | MS.gene33483:CDS |
| GTATTCACAGGAATGTTAAG+CGG | 0.659850 | 4.3:+83204646 | MS.gene33483:CDS |
| AAGATCCGTCTTTGGAACAA+GGG | 0.660742 | 4.3:+83203344 | MS.gene33483:CDS |
| ACTTGGTCAAGTTGTCTCAG+AGG | 0.674209 | 4.3:+83204732 | MS.gene33483:CDS |
| ATGAAATGCGATTAAGACTG+AGG | 0.676913 | 4.3:+83203405 | MS.gene33483:CDS |
| GTAGAGTTGAGAGAAACGAT+GGG | 0.679056 | 4.3:+83204904 | MS.gene33483:CDS |
| TCATTCAAAACAGAATCAGG+AGG | 0.706543 | 4.3:-83199978 | None:intergenic |
| ATTCACAGGAATGTTAAGCG+GGG | 0.713944 | 4.3:+83204648 | MS.gene33483:CDS |
| GTTGGCTAGTGCAACCAATG+TGG | 0.714392 | 4.3:+83202780 | MS.gene33483:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAACAAATAAAAAAAA+TGG | - | chr4.3:83200104-83200123 | None:intergenic | 10.0% |
| !! | AACAAACAAATAAAAAAAAT+GGG | - | chr4.3:83200103-83200122 | None:intergenic | 10.0% |
| !! | ATAAAATAAACTAAAAATTG+AGG | - | chr4.3:83201345-83201364 | None:intergenic | 10.0% |
| !!! | TATAATTTTTTGTCAAATAA+CGG | + | chr4.3:83202548-83202567 | MS.gene33483:intron | 10.0% |
| !! | AAAAAAAAAAAGTTGAATGA+AGG | - | chr4.3:83202836-83202855 | None:intergenic | 15.0% |
| !! | AAATTATTAGTATGAAGTTA+TGG | - | chr4.3:83201976-83201995 | None:intergenic | 15.0% |
| !! | AATATAAAGTGATTTATGTT+TGG | + | chr4.3:83200550-83200569 | MS.gene33483:intron | 15.0% |
| !! | TAAAAATCAAAGATCAATAA+TGG | - | chr4.3:83200172-83200191 | None:intergenic | 15.0% |
| !! | TCTAATATAAACTAAATTTC+AGG | + | chr4.3:83202390-83202409 | MS.gene33483:intron | 15.0% |
| !!! | CATTTTATTTAAATTCAACT+AGG | + | chr4.3:83204384-83204403 | MS.gene33483:intron | 15.0% |
| !!! | TCTTTTTTTGTTATATTGTT+TGG | + | chr4.3:83200434-83200453 | MS.gene33483:intron | 15.0% |
| !! | AAAATTACAATACTGCTATT+TGG | + | chr4.3:83204992-83205011 | MS.gene33483:CDS | 20.0% |
| !! | AATAAGTCATTTGTAAATTG+AGG | - | chr4.3:83201868-83201887 | None:intergenic | 20.0% |
| !! | ATAAGTCATTTGTAAATTGA+GGG | - | chr4.3:83201867-83201886 | None:intergenic | 20.0% |
| !! | CATTAATGTAAAATCAACTT+TGG | + | chr4.3:83202270-83202289 | MS.gene33483:intron | 20.0% |
| !! | GAGTTAAATAAGCATATATT+TGG | - | chr4.3:83202369-83202388 | None:intergenic | 20.0% |
| !! | TATATTTGTGCATGTTATAT+AGG | + | chr4.3:83201478-83201497 | MS.gene33483:intron | 20.0% |
| !!! | AATATTTGTTGTTAACTTAC+AGG | + | chr4.3:83204587-83204606 | MS.gene33483:intron | 20.0% |
| !!! | AGAGTTTAGATTTTCTTAAA+AGG | + | chr4.3:83203562-83203581 | MS.gene33483:CDS | 20.0% |
| !!! | ATAGATCAATGATTTGAAAT+TGG | + | chr4.3:83200275-83200294 | MS.gene33483:intron | 20.0% |
| !!! | ATATTTGTTGTTAACTTACA+GGG | + | chr4.3:83204588-83204607 | MS.gene33483:intron | 20.0% |
| !!! | ATTTTGAACAGATAGTAATT+TGG | + | chr4.3:83201180-83201199 | MS.gene33483:intron | 20.0% |
| !!! | GTTTGACTTAATTTTATCTT+TGG | - | chr4.3:83203121-83203140 | None:intergenic | 20.0% |
| !!! | TAAACTAAATTTCAGGTTTT+TGG | + | chr4.3:83202397-83202416 | MS.gene33483:intron | 20.0% |
| !!! | TAATACTGTTTTTCTAATGA+AGG | - | chr4.3:83201153-83201172 | None:intergenic | 20.0% |
| !!! | TAGATCAATGATTTGAAATT+GGG | + | chr4.3:83200276-83200295 | MS.gene33483:intron | 20.0% |
| !!! | TAGTTCTTTCTTTAATTTTC+TGG | - | chr4.3:83204146-83204165 | None:intergenic | 20.0% |
| !!! | TGGTTGATCTTTATTTTTTT+TGG | + | chr4.3:83202729-83202748 | MS.gene33483:intron | 20.0% |
| ! | AATTAAGCTATTATCCAAAC+CGG | - | chr4.3:83203054-83203073 | None:intergenic | 25.0% |
| ! | ACTTTGTCGATGAAAAAATT+AGG | - | chr4.3:83201383-83201402 | None:intergenic | 25.0% |
| ! | ATATCATTCAAAACAGAATC+AGG | - | chr4.3:83199984-83200003 | None:intergenic | 25.0% |
| ! | CTAGGAAAATAAACTGAAAA+CGG | + | chr4.3:83203182-83203201 | MS.gene33483:intron | 25.0% |
| ! | GAAAACATATCTTGTAAAAG+TGG | - | chr4.3:83203710-83203729 | None:intergenic | 25.0% |
| ! | GTAAAATATGTAACTTACAC+TGG | - | chr4.3:83202484-83202503 | None:intergenic | 25.0% |
| ! | GTATGATATGACATAACAAT+GGG | - | chr4.3:83202454-83202473 | None:intergenic | 25.0% |
| ! | TAATGTAAAATCAACTTTGG+AGG | + | chr4.3:83202273-83202292 | MS.gene33483:intron | 25.0% |
| ! | TAGAGTTTGATGAATTTGAT+TGG | + | chr4.3:83200240-83200259 | MS.gene33483:intron | 25.0% |
| ! | TAGATATCATCTTGTAAACT+GGG | + | chr4.3:83203586-83203605 | MS.gene33483:intron | 25.0% |
| ! | TATTCTCTTCAGGAAAAAAT+TGG | + | chr4.3:83201909-83201928 | MS.gene33483:intron | 25.0% |
| ! | TATTTCACAACACTGTTAAA+TGG | + | chr4.3:83204438-83204457 | MS.gene33483:intron | 25.0% |
| ! | TCTTGAGATTAAAAAACTAC+TGG | + | chr4.3:83202700-83202719 | MS.gene33483:intron | 25.0% |
| ! | TGGGTTAAACAATAAATTTG+AGG | + | chr4.3:83200590-83200609 | MS.gene33483:intron | 25.0% |
| ! | TTAGATATCATCTTGTAAAC+TGG | + | chr4.3:83203585-83203604 | MS.gene33483:intron | 25.0% |
| ! | TTCACTAATGACTTTCTAAT+GGG | + | chr4.3:83204118-83204137 | MS.gene33483:intron | 25.0% |
| ! | TTCTAGCATTGTAAAATCTA+TGG | + | chr4.3:83204553-83204572 | MS.gene33483:intron | 25.0% |
| ! | TTTCACTAATGACTTTCTAA+TGG | + | chr4.3:83204117-83204136 | MS.gene33483:intron | 25.0% |
| !! | AAAAATTCCAAGTTGAATGA+AGG | - | chr4.3:83202875-83202894 | None:intergenic | 25.0% |
| !! | ACATAAAGTAAAGTGCATTT+TGG | - | chr4.3:83203912-83203931 | None:intergenic | 25.0% |
| !! | ATGCACAAAGTTTGAAATAA+TGG | + | chr4.3:83203449-83203468 | MS.gene33483:intron | 25.0% |
| !! | CAATGTGAATGAAATGATTT+TGG | + | chr4.3:83202200-83202219 | MS.gene33483:intron | 25.0% |
| !! | CATATATTTGGTTGCATTTT+TGG | - | chr4.3:83202357-83202376 | None:intergenic | 25.0% |
| !! | TTTTATGGAGCACAATTAAT+TGG | + | chr4.3:83201539-83201558 | MS.gene33483:CDS | 25.0% |
| !!! | ACCATAATCACTTTTTATCA+CGG | - | chr4.3:83200517-83200536 | None:intergenic | 25.0% |
| !!! | AGCATTTTAATATTCTCTTC+AGG | + | chr4.3:83201899-83201918 | MS.gene33483:intron | 25.0% |
| !!! | CTCTGAAATTTCTTTGATTT+TGG | + | chr4.3:83204066-83204085 | MS.gene33483:intron | 25.0% |
| !!! | TAAAAAACTACTGGTTCTTA+TGG | + | chr4.3:83202709-83202728 | MS.gene33483:intron | 25.0% |
| !!! | TTTTAAGAGACCAGAAATAA+TGG | + | chr4.3:83204506-83204525 | MS.gene33483:intron | 25.0% |
| AAATATGTTTCGTTAGCCAT+TGG | - | chr4.3:83205056-83205075 | None:intergenic | 30.0% | |
| AACACACTTTCCATTATTTC+TGG | - | chr4.3:83204519-83204538 | None:intergenic | 30.0% | |
| AACCAGAAAACATGGAATTA+TGG | - | chr4.3:83201066-83201085 | None:intergenic | 30.0% | |
| AATCCTGCAGTTAATAAATG+AGG | - | chr4.3:83202172-83202191 | None:intergenic | 30.0% | |
| AGCTATTAATTTACGATCGT+AGG | - | chr4.3:83203835-83203854 | None:intergenic | 30.0% | |
| ATGAAAGAAACTCACGAAAA+AGG | - | chr4.3:83200050-83200069 | None:intergenic | 30.0% | |
| ATTAAGCTATTATCCAAACC+GGG | - | chr4.3:83203053-83203072 | None:intergenic | 30.0% | |
| CACAATTAATTGGATCCAAA+AGG | + | chr4.3:83201549-83201568 | MS.gene33483:CDS | 30.0% | |
| CATGTTGAAACATGTTACAT+AGG | + | chr4.3:83200143-83200162 | MS.gene33483:intron | 30.0% | |
| CCTCAAGTTAGAATTAATTC+CGG | + | chr4.3:83200653-83200672 | MS.gene33483:intron | 30.0% | |
| CGATGAAAAAATTAGGAAAC+AGG | - | chr4.3:83201376-83201395 | None:intergenic | 30.0% | |
| GGATACATTAATGTGAAAGT+GGG | + | chr4.3:83200571-83200590 | MS.gene33483:intron | 30.0% | |
| GGTATGATATGACATAACAA+TGG | - | chr4.3:83202455-83202474 | None:intergenic | 30.0% | |
| GTTAATAAATGAGGAGATAG+AGG | - | chr4.3:83202163-83202182 | None:intergenic | 30.0% | |
| TACGTTTGTGCATGTAATAT+AGG | + | chr4.3:83201402-83201421 | MS.gene33483:intron | 30.0% | |
| TGGATACATTAATGTGAAAG+TGG | + | chr4.3:83200570-83200589 | MS.gene33483:intron | 30.0% | |
| TGGTATTAAATAGCTAATCG+TGG | - | chr4.3:83202619-83202638 | None:intergenic | 30.0% | |
| TGTGCTCCATAAAATTCTTT+CGG | - | chr4.3:83201533-83201552 | None:intergenic | 30.0% | |
| TGTTCAGCTAACACTTAATA+AGG | - | chr4.3:83203006-83203025 | None:intergenic | 30.0% | |
| TTAGTATGAAGTTATGGATG+TGG | - | chr4.3:83201970-83201989 | None:intergenic | 30.0% | |
| TTCCTAGATACACATTTAGT+TGG | + | chr4.3:83202762-83202781 | MS.gene33483:CDS | 30.0% | |
| TTGTGCATGAAAATGACAAA+AGG | - | chr4.3:83203437-83203456 | None:intergenic | 30.0% | |
| ! | AACCATAATTCCATGTTTTC+TGG | + | chr4.3:83201061-83201080 | MS.gene33483:intron | 30.0% |
| ! | AATAAACTGAAAACGGCTTT+TGG | + | chr4.3:83203189-83203208 | MS.gene33483:intron | 30.0% |
| ! | AATAACGGTTTGATAACACT+TGG | - | chr4.3:83202639-83202658 | None:intergenic | 30.0% |
| ! | AATTCTAGAGATGAAGAAGA+TGG | + | chr4.3:83199954-83199973 | MS.gene33483:CDS | 30.0% |
| ! | AATTTTGCCATCTTGATCTT+CGG | - | chr4.3:83204818-83204837 | None:intergenic | 30.0% |
| ! | ATAAAGTACCTTCGAGAAAT+GGG | + | chr4.3:83201263-83201282 | MS.gene33483:CDS | 30.0% |
| ! | ATTTCATGTGACTTGTACTT+AGG | - | chr4.3:83203392-83203411 | None:intergenic | 30.0% |
| ! | GAGAGTTTAAGATTCAATCA+TGG | - | chr4.3:83201810-83201829 | None:intergenic | 30.0% |
| ! | TATAAAGTACCTTCGAGAAA+TGG | + | chr4.3:83201262-83201281 | MS.gene33483:CDS | 30.0% |
| ! | TTCTTCAAGATCTTTTCCAA+TGG | - | chr4.3:83202955-83202974 | None:intergenic | 30.0% |
| ! | TTTTTCTTCAGATATGTCTC+TGG | + | chr4.3:83201215-83201234 | MS.gene33483:intron | 30.0% |
| !! | ACAATACTGCTATTTGGTTT+TGG | + | chr4.3:83204998-83205017 | MS.gene33483:CDS | 30.0% |
| !! | ATATTTGGTTGCATTTTTGG+AGG | - | chr4.3:83202354-83202373 | None:intergenic | 30.0% |
| !! | CGTTTTCAGTTTATTTTCCT+AGG | - | chr4.3:83203184-83203203 | None:intergenic | 30.0% |
| !! | TTGATGAATTTGATTGGCTT+AGG | + | chr4.3:83200246-83200265 | MS.gene33483:intron | 30.0% |
| !!! | ATTTTGCTGTTGTTCTTGTT+TGG | + | chr4.3:83200311-83200330 | MS.gene33483:intron | 30.0% |
| AAACAGATGAAGTGCATGTT+TGG | - | chr4.3:83200707-83200726 | None:intergenic | 35.0% | |
| AACAGATGAAGTGCATGTTT+GGG | - | chr4.3:83200706-83200725 | None:intergenic | 35.0% | |
| AACATTCCTGTGAATACTAC+AGG | - | chr4.3:83204643-83204662 | None:intergenic | 35.0% | |
| AACTATTGTTACCGTTCCAA+TGG | + | chr4.3:83205037-83205056 | MS.gene33483:CDS | 35.0% | |
| AAGCCCTTGATTATTCATGT+TGG | + | chr4.3:83203522-83203541 | MS.gene33483:CDS | 35.0% | |
| ACAAAAAGAGCAATTCTACG+AGG | - | chr4.3:83200017-83200036 | None:intergenic | 35.0% | |
| ACAACACTGTCAAATACTAG+AGG | - | chr4.3:83201625-83201644 | None:intergenic | 35.0% | |
| ACAGAAATAGATCCCTTCAA+CGG | + | chr4.3:83203751-83203770 | MS.gene33483:intron | 35.0% | |
| ACTTCTCATCAAAGTTTCCA+AGG | - | chr4.3:83200786-83200805 | None:intergenic | 35.0% | |
| AGAAGTTAAATTCCCGAACA+AGG | + | chr4.3:83200873-83200892 | MS.gene33483:intron | 35.0% | |
| AGCCAACTAAATGTGTATCT+AGG | - | chr4.3:83202767-83202786 | None:intergenic | 35.0% | |
| AGCCCTTGATTATTCATGTT+GGG | + | chr4.3:83203523-83203542 | MS.gene33483:CDS | 35.0% | |
| ATAATCACCGAAGATCAAGA+TGG | + | chr4.3:83204808-83204827 | MS.gene33483:CDS | 35.0% | |
| ATACTTAGAACCAACCACAT+TGG | - | chr4.3:83202797-83202816 | None:intergenic | 35.0% | |
| ATACTTGTGTTATGCAGCAA+TGG | + | chr4.3:83203489-83203508 | MS.gene33483:intron | 35.0% | |
| ATGAAATGCGATTAAGACTG+AGG | + | chr4.3:83203405-83203424 | MS.gene33483:CDS | 35.0% | |
| ATGTAACTTACACTGGTACA+TGG | - | chr4.3:83202477-83202496 | None:intergenic | 35.0% | |
| CAGACAAAAACCAGAAAACA+TGG | - | chr4.3:83201074-83201093 | None:intergenic | 35.0% | |
| CAGCACTTTGTACTAAATTG+CGG | - | chr4.3:83201721-83201740 | None:intergenic | 35.0% | |
| CCGGAATTAATTCTAACTTG+AGG | - | chr4.3:83200656-83200675 | None:intergenic | 35.0% | |
| CGTGAATCGTGCAAAAATAA+CGG | - | chr4.3:83202654-83202673 | None:intergenic | 35.0% | |
| CTATAACTTTGACACTTCTG+CGG | - | chr4.3:83200633-83200652 | None:intergenic | 35.0% | |
| GAAGATCAAGATGGCAAAAT+TGG | + | chr4.3:83204817-83204836 | MS.gene33483:CDS | 35.0% | |
| GAGCTAGAGAAATTGTTAGA+AGG | + | chr4.3:83204613-83204632 | MS.gene33483:CDS | 35.0% | |
| GCCGTGATAAAAAGTGATTA+TGG | + | chr4.3:83200513-83200532 | MS.gene33483:intron | 35.0% | |
| GTATTCACAGGAATGTTAAG+CGG | + | chr4.3:83204646-83204665 | MS.gene33483:CDS | 35.0% | |
| TAGCATTTCTTCTATGCCTT+TGG | + | chr4.3:83203027-83203046 | MS.gene33483:intron | 35.0% | |
| TAGTCCGAGAATAATTTCAG+CGG | + | chr4.3:83202069-83202088 | MS.gene33483:CDS | 35.0% | |
| TATTCACAGGAATGTTAAGC+GGG | + | chr4.3:83204647-83204666 | MS.gene33483:CDS | 35.0% | |
| TCATTCAAAACAGAATCAGG+AGG | - | chr4.3:83199981-83200000 | None:intergenic | 35.0% | |
| TCTCCTCATTTATTAACTGC+AGG | + | chr4.3:83202166-83202185 | MS.gene33483:intron | 35.0% | |
| TGTAACTTACACTGGTACAT+GGG | - | chr4.3:83202476-83202495 | None:intergenic | 35.0% | |
| TGTGCATGTAATATAGGTCT+TGG | + | chr4.3:83201408-83201427 | MS.gene33483:intron | 35.0% | |
| TGTGCATGTTATATAGGTCA+TGG | + | chr4.3:83201484-83201503 | MS.gene33483:intron | 35.0% | |
| TGTGTATCAGATGTTAATGC+AGG | - | chr4.3:83203970-83203989 | None:intergenic | 35.0% | |
| TTATCTCAAGCATATGCTAG+TGG | + | chr4.3:83204676-83204695 | MS.gene33483:CDS | 35.0% | |
| TTCAGAGTATGTTACCTGTA+GGG | - | chr4.3:83204053-83204072 | None:intergenic | 35.0% | |
| TTCTCAAACAGTCTAACTAG+TGG | + | chr4.3:83203238-83203257 | MS.gene33483:intron | 35.0% | |
| TTGACAGTGTTGTCAAATAG+CGG | + | chr4.3:83201632-83201651 | MS.gene33483:intron | 35.0% | |
| TTGTCAAACGTGGAAAATAG+CGG | + | chr4.3:83204267-83204286 | MS.gene33483:intron | 35.0% | |
| TTGTGAAATAGCATCTACAG+TGG | - | chr4.3:83204428-83204447 | None:intergenic | 35.0% | |
| TTTCAGAGTATGTTACCTGT+AGG | - | chr4.3:83204054-83204073 | None:intergenic | 35.0% | |
| ! | AAGATCTTTTCCAATGGCAA+CGG | - | chr4.3:83202949-83202968 | None:intergenic | 35.0% |
| ! | AGCGATTTAAAACCTTGTTC+GGG | - | chr4.3:83200888-83200907 | None:intergenic | 35.0% |
| ! | CAGCGATTTAAAACCTTGTT+CGG | - | chr4.3:83200889-83200908 | None:intergenic | 35.0% |
| ! | GATCAATGTTAGCAACCTTT+TGG | - | chr4.3:83201567-83201586 | None:intergenic | 35.0% |
| ! | GCATTTTGGACTCAAATACT+CGG | - | chr4.3:83203898-83203917 | None:intergenic | 35.0% |
| ! | GGAAAGTGTGTTACAAAAGT+TGG | + | chr4.3:83204527-83204546 | MS.gene33483:intron | 35.0% |
| ! | GGAGGTAAAATTGATTTCAG+AGG | - | chr4.3:83202333-83202352 | None:intergenic | 35.0% |
| ! | TAGAAATGGAGAAGTATGAC+TGG | + | chr4.3:83204941-83204960 | MS.gene33483:CDS | 35.0% |
| ! | TTTTCCACGTTTGACAACAA+TGG | - | chr4.3:83204264-83204283 | None:intergenic | 35.0% |
| !! | CACAAAGTGTTGTCAAATAG+TGG | - | chr4.3:83204338-83204357 | None:intergenic | 35.0% |
| !! | GAATTTGATTGGCTTAGGAT+TGG | + | chr4.3:83200251-83200270 | MS.gene33483:intron | 35.0% |
| !! | TTTGTTGTTAACTTACAGGG+AGG | + | chr4.3:83204591-83204610 | MS.gene33483:intron | 35.0% |
| !!! | AAGGTTTTAAATCGCTGTTG+TGG | + | chr4.3:83200892-83200911 | MS.gene33483:intron | 35.0% |
| !!! | CATGTTTTCTGGTTTTTGTC+TGG | + | chr4.3:83201072-83201091 | MS.gene33483:intron | 35.0% |
| !!! | GGAGTACCGAAAGAATTTTA+TGG | + | chr4.3:83201524-83201543 | MS.gene33483:CDS | 35.0% |
| AAAAGCCGCACGTATAGAAA+TGG | + | chr4.3:83204927-83204946 | MS.gene33483:CDS | 40.0% | |
| ACCTTCTGATACCAAGGAAA+AGG | - | chr4.3:83202031-83202050 | None:intergenic | 40.0% | |
| ACGCCCAACATGAATAATCA+AGG | - | chr4.3:83203529-83203548 | None:intergenic | 40.0% | |
| AGAGGACATGGAGAAACAAA+AGG | - | chr4.3:83201607-83201626 | None:intergenic | 40.0% | |
| ATAATACACGCATCATCACC+TGG | + | chr4.3:83202112-83202131 | MS.gene33483:CDS | 40.0% | |
| ATTATTCATGTTGGGCGTCT+TGG | + | chr4.3:83203531-83203550 | MS.gene33483:CDS | 40.0% | |
| ATTCACAGGAATGTTAAGCG+GGG | + | chr4.3:83204648-83204667 | MS.gene33483:CDS | 40.0% | |
| ATTGATTGAGATCCCGTTGA+AGG | - | chr4.3:83203767-83203786 | None:intergenic | 40.0% | |
| ATTGGATATCTCTACACTCC+AGG | + | chr4.3:83204835-83204854 | MS.gene33483:CDS | 40.0% | |
| CAGAAATAGATCCCTTCAAC+GGG | + | chr4.3:83203752-83203771 | MS.gene33483:intron | 40.0% | |
| CAGTGACACACACTTAATTG+TGG | + | chr4.3:83200973-83200992 | MS.gene33483:intron | 40.0% | |
| CGCCCAACATGAATAATCAA+GGG | - | chr4.3:83203528-83203547 | None:intergenic | 40.0% | |
| CTGTCAAATACTAGAGGACA+TGG | - | chr4.3:83201619-83201638 | None:intergenic | 40.0% | |
| CTTCTCCATTTCTATACGTG+CGG | - | chr4.3:83204935-83204954 | None:intergenic | 40.0% | |
| CTTGTTAGCTGGAAATCAAC+AGG | - | chr4.3:83203327-83203346 | None:intergenic | 40.0% | |
| GAAACTCACGAAAAAGGTGA+AGG | - | chr4.3:83200044-83200063 | None:intergenic | 40.0% | |
| GAAGAAGCTAGAGTAACAAC+AGG | + | chr4.3:83202969-83202988 | MS.gene33483:CDS | 40.0% | |
| GAGAGAACCTTCATTCAACT+TGG | + | chr4.3:83202865-83202884 | MS.gene33483:intron | 40.0% | |
| GATCTTCGGTGATTATGTCT+GGG | - | chr4.3:83204804-83204823 | None:intergenic | 40.0% | |
| GATGATGCGTGTATTATGTC+AGG | - | chr4.3:83202109-83202128 | None:intergenic | 40.0% | |
| GCAACCGCTGAAATTATTCT+CGG | - | chr4.3:83202076-83202095 | None:intergenic | 40.0% | |
| GGGAATTACACAGTTACACA+CGG | - | chr4.3:83203869-83203888 | None:intergenic | 40.0% | |
| GTAGAGTTGAGAGAAACGAT+GGG | + | chr4.3:83204904-83204923 | MS.gene33483:CDS | 40.0% | |
| TAAAAAACCTTGACGTGTCG+CGG | + | chr4.3:83201007-83201026 | MS.gene33483:intron | 40.0% | |
| TAGACTATCTTGATGAGCCT+AGG | + | chr4.3:83203164-83203183 | MS.gene33483:intron | 40.0% | |
| TAGGCTCATCAAGATAGTCT+AGG | - | chr4.3:83203165-83203184 | None:intergenic | 40.0% | |
| TCTTAAACTCTCCGTCTCTT+AGG | + | chr4.3:83201818-83201837 | MS.gene33483:intron | 40.0% | |
| TGAATAATCAAGGGCTTCTC+TGG | - | chr4.3:83203519-83203538 | None:intergenic | 40.0% | |
| TGATCTTCGGTGATTATGTC+TGG | - | chr4.3:83204805-83204824 | None:intergenic | 40.0% | |
| TGCAAACATACCATTATGCC+AGG | - | chr4.3:83202133-83202152 | None:intergenic | 40.0% | |
| TGTGTAATGCAATCTCGTTG+AGG | - | chr4.3:83201110-83201129 | None:intergenic | 40.0% | |
| TGTTTCGTTAGCCATTGGAA+CGG | - | chr4.3:83205051-83205070 | None:intergenic | 40.0% | |
| TTCAACGGGATCTCAATCAA+TGG | + | chr4.3:83203766-83203785 | MS.gene33483:intron | 40.0% | |
| TTGATTGAGATCCCGTTGAA+GGG | - | chr4.3:83203766-83203785 | None:intergenic | 40.0% | |
| ! | AAATGGAGAAGTATGACTGG+AGG | + | chr4.3:83204944-83204963 | MS.gene33483:CDS | 40.0% |
| ! | AATGGAGAAGTATGACTGGA+GGG | + | chr4.3:83204945-83204964 | MS.gene33483:CDS | 40.0% |
| ! | ATTAGACTTGCTTGTGACTC+CGG | - | chr4.3:83200675-83200694 | None:intergenic | 40.0% |
| ! | ATTGCAGCTTTCCTTTTCCT+TGG | + | chr4.3:83202017-83202036 | MS.gene33483:intron | 40.0% |
| ! | TCCTTTTCCTTGGTATCAGA+AGG | + | chr4.3:83202027-83202046 | MS.gene33483:CDS | 40.0% |
| !! | AAGATCCGTCTTTGGAACAA+GGG | + | chr4.3:83203344-83203363 | MS.gene33483:CDS | 40.0% |
| !! | TTTGGTTGCATTTTTGGAGG+AGG | - | chr4.3:83202351-83202370 | None:intergenic | 40.0% |
| !!! | GTTTTGACTTCGTGTGTGTT+TGG | + | chr4.3:83200486-83200505 | MS.gene33483:intron | 40.0% |
| !!! | TTGGTTTTGGCGCAAGAAAA+AGG | + | chr4.3:83205011-83205030 | MS.gene33483:CDS | 40.0% |
| AACTCTACGTCATGCAACAG+AGG | - | chr4.3:83204892-83204911 | None:intergenic | 45.0% | |
| ACAATAGCGATTCGTGCTTC+AGG | - | chr4.3:83204020-83204039 | None:intergenic | 45.0% | |
| ACTCAAATACTCGGCAGTAG+GGG | - | chr4.3:83203889-83203908 | None:intergenic | 45.0% | |
| AGTTCCGTATGCCTAAGAGA+CGG | - | chr4.3:83201832-83201851 | None:intergenic | 45.0% | |
| ATGGTCGTGACAACACATGA+AGG | + | chr4.3:83201503-83201522 | MS.gene33483:CDS | 45.0% | |
| CAAAGACGGATCTTGTTAGC+TGG | - | chr4.3:83203338-83203357 | None:intergenic | 45.0% | |
| CAACACCCTTGTTCCAAAGA+CGG | - | chr4.3:83203352-83203371 | None:intergenic | 45.0% | |
| CAGCTAACAAGATCCGTCTT+TGG | + | chr4.3:83203336-83203355 | MS.gene33483:intron | 45.0% | |
| CGAATCGCTATTGTTGGAGA+TGG | + | chr4.3:83204026-83204045 | MS.gene33483:CDS | 45.0% | |
| CGTAGAGTTGAGAGAAACGA+TGG | + | chr4.3:83204903-83204922 | MS.gene33483:CDS | 45.0% | |
| CTGTAGTGAAACATGCACCT+TGG | + | chr4.3:83200839-83200858 | MS.gene33483:intron | 45.0% | |
| GAAGCACGAATCGCTATTGT+TGG | + | chr4.3:83204020-83204039 | MS.gene33483:CDS | 45.0% | |
| GACAACTTGACCAAGTGTCT+CGG | - | chr4.3:83204728-83204747 | None:intergenic | 45.0% | |
| GACTCAAATACTCGGCAGTA+GGG | - | chr4.3:83203890-83203909 | None:intergenic | 45.0% | |
| GACTTTGCAGTGTCATGGAT+AGG | + | chr4.3:83203991-83204010 | MS.gene33483:intron | 45.0% | |
| GATGCCATTGTTGTCAAACG+TGG | + | chr4.3:83204257-83204276 | MS.gene33483:intron | 45.0% | |
| TATTATCCAAACCGGGCCAA+AGG | - | chr4.3:83203046-83203065 | None:intergenic | 45.0% | |
| TATTCTCGGACTAAGTGCCA+AGG | - | chr4.3:83202062-83202081 | None:intergenic | 45.0% | |
| TCTTCAGGGATTCCTGTTGT+GGG | + | chr4.3:83204760-83204779 | MS.gene33483:CDS | 45.0% | |
| TGCGGATCGCAGAACAATAA+TGG | - | chr4.3:83201703-83201722 | None:intergenic | 45.0% | |
| TTGTGGTCGCATCATGAATG+TGG | + | chr4.3:83200909-83200928 | MS.gene33483:intron | 45.0% | |
| TTTCTTCTATGCCTTTGGCC+CGG | + | chr4.3:83203032-83203051 | MS.gene33483:intron | 45.0% | |
| ! | ACTTGGTCAAGTTGTCTCAG+AGG | + | chr4.3:83204732-83204751 | MS.gene33483:CDS | 45.0% |
| ! | GATTATGTCTGGGATTCCAC+CGG | - | chr4.3:83204794-83204813 | None:intergenic | 45.0% |
| ! | TCTTTTCCAATGGCAACGGA+TGG | - | chr4.3:83202945-83202964 | None:intergenic | 45.0% |
| !! | CAAGATCCGTCTTTGGAACA+AGG | + | chr4.3:83203343-83203362 | MS.gene33483:CDS | 45.0% |
| !!! | AATTTTTAGTTTATTTTATA+TGG | + | chr4.3:83201346-83201365 | MS.gene33483:intron | 5.0% |
| !!! | TTGTTTTTTTTAAAATTAAT+TGG | + | chr4.3:83200118-83200137 | MS.gene33483:intron | 5.0% |
| AAGCAATCGTCGAGATCACC+TGG | - | chr4.3:83204856-83204875 | None:intergenic | 50.0% | |
| CACACGACTTTGCAGTGTCA+TGG | + | chr4.3:83203986-83204005 | MS.gene33483:intron | 50.0% | |
| CCTCATCTCCCATTTCTCGA+AGG | - | chr4.3:83201274-83201293 | None:intergenic | 50.0% | |
| CCTTCGAGAAATGGGAGATG+AGG | + | chr4.3:83201271-83201290 | MS.gene33483:CDS | 50.0% | |
| CGCATCATCACCTGGCATAA+TGG | + | chr4.3:83202120-83202139 | MS.gene33483:CDS | 50.0% | |
| CTCTCCGTCTCTTAGGCATA+CGG | + | chr4.3:83201825-83201844 | MS.gene33483:intron | 50.0% | |
| CTGTTGTGACTCATGCACCT+TGG | + | chr4.3:83200766-83200785 | MS.gene33483:intron | 50.0% | |
| GCTAGTGCAACCAATGTGGT+TGG | + | chr4.3:83202784-83202803 | MS.gene33483:CDS | 50.0% | |
| GCTTTGTCGTCGTGTGTGTT+TGG | + | chr4.3:83200363-83200382 | MS.gene33483:intron | 50.0% | |
| GGACTCAAATACTCGGCAGT+AGG | - | chr4.3:83203891-83203910 | None:intergenic | 50.0% | |
| GGCATGCCTGTAGTATTCAC+AGG | + | chr4.3:83204634-83204653 | MS.gene33483:CDS | 50.0% | |
| GTCTTCAGGGATTCCTGTTG+TGG | + | chr4.3:83204759-83204778 | MS.gene33483:CDS | 50.0% | |
| GTTGGCTAGTGCAACCAATG+TGG | + | chr4.3:83202780-83202799 | MS.gene33483:CDS | 50.0% | |
| TCTCAGAGGCTCTGTCTTCA+GGG | + | chr4.3:83204746-83204765 | MS.gene33483:CDS | 50.0% | |
| TTGTTGGAGATGGACCCTAC+AGG | + | chr4.3:83204036-83204055 | MS.gene33483:CDS | 50.0% | |
| !! | AGGGGTACCTTCTGATACCA+AGG | - | chr4.3:83202037-83202056 | None:intergenic | 50.0% |
| !! | GTCGTGTGTGTTTGGTTCTG+CGG | + | chr4.3:83200371-83200390 | MS.gene33483:intron | 50.0% |
| AGCGGCTACAGCAGCACTAT+AGG | + | chr4.3:83201650-83201669 | MS.gene33483:intron | 55.0% | |
| CCAAGTGTCTCGGACTCTGA+CGG | - | chr4.3:83204718-83204737 | None:intergenic | 55.0% | |
| CGGACTAAGTGCCAAGGAGA+GGG | - | chr4.3:83202056-83202075 | None:intergenic | 55.0% | |
| CTAGTGCCATCCGTTGCCAT+TGG | + | chr4.3:83202936-83202955 | MS.gene33483:CDS | 55.0% | |
| GCACTATAGGGCTATAGCGC+AGG | + | chr4.3:83201663-83201682 | MS.gene33483:intron | 55.0% | |
| GCGGCTACAGCAGCACTATA+GGG | + | chr4.3:83201651-83201670 | MS.gene33483:intron | 55.0% | |
| GGACTAAGTGCCAAGGAGAG+GGG | - | chr4.3:83202055-83202074 | None:intergenic | 55.0% | |
| GTCTCAGAGGCTCTGTCTTC+AGG | + | chr4.3:83204745-83204764 | MS.gene33483:CDS | 55.0% | |
| TCGGACTAAGTGCCAAGGAG+AGG | - | chr4.3:83202057-83202076 | None:intergenic | 55.0% | |
| TCTATGCCTTTGGCCCGGTT+TGG | + | chr4.3:83203037-83203056 | MS.gene33483:intron | 55.0% | |
| !! | TCAGAAGGTACCCCTCTCCT+TGG | + | chr4.3:83202042-83202061 | MS.gene33483:CDS | 55.0% |
| ATTGCAGCCGCGACACGTCA+AGG | - | chr4.3:83201017-83201036 | None:intergenic | 60.0% | |
| CCGTCAGAGTCCGAGACACT+TGG | + | chr4.3:83204715-83204734 | MS.gene33483:CDS | 60.0% | |
| CCTGTTGTGGGCGCACGTGC+CGG | + | chr4.3:83204772-83204791 | MS.gene33483:CDS | 70.0% | |
| CCGGCACGTGCGCCCACAAC+AGG | - | chr4.3:83204775-83204794 | None:intergenic | 75.0% | |
| GTTGTGGGCGCACGTGCCGG+TGG | + | chr4.3:83204775-83204794 | MS.gene33483:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 83199927 | 83205098 | 83199927 | ID=MS.gene33483 |
| chr4.3 | mRNA | 83199927 | 83205098 | 83199927 | ID=MS.gene33483.t1;Parent=MS.gene33483 |
| chr4.3 | exon | 83199927 | 83200054 | 83199927 | ID=MS.gene33483.t1.exon1;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83199927 | 83200054 | 83199927 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83201226 | 83201292 | 83201226 | ID=MS.gene33483.t1.exon2;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83201226 | 83201292 | 83201226 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83201500 | 83201570 | 83201500 | ID=MS.gene33483.t1.exon3;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83201500 | 83201570 | 83201500 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83202024 | 83202141 | 83202024 | ID=MS.gene33483.t1.exon4;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83202024 | 83202141 | 83202024 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83202412 | 83202485 | 83202412 | ID=MS.gene33483.t1.exon5;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83202412 | 83202485 | 83202412 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83202757 | 83202812 | 83202757 | ID=MS.gene33483.t1.exon6;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83202757 | 83202812 | 83202757 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83202907 | 83202990 | 83202907 | ID=MS.gene33483.t1.exon7;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83202907 | 83202990 | 83202907 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83203339 | 83203426 | 83203339 | ID=MS.gene33483.t1.exon8;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83203339 | 83203426 | 83203339 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83203506 | 83203583 | 83203506 | ID=MS.gene33483.t1.exon9;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83203506 | 83203583 | 83203506 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83204001 | 83204057 | 83204001 | ID=MS.gene33483.t1.exon10;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83204001 | 83204057 | 83204001 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| chr4.3 | exon | 83204609 | 83205098 | 83204609 | ID=MS.gene33483.t1.exon11;Parent=MS.gene33483.t1 |
| chr4.3 | CDS | 83204609 | 83205098 | 83204609 | ID=cds.MS.gene33483.t1;Parent=MS.gene33483.t1 |
| Gene Sequence |
| Protein sequence |
