AlfalfaGEDB | MS.gene34718

M. sativa cultivar XinJiangDaYe / MS.gene34718

KEGG: K09338
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00046.32 PF02183.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34718.t1	XP_013445749.1	100	282	0	0	1	282	1	282	6.90E-136	493.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34718.t1	Q8LC03	62.3	289	101	5	1	282	7	294	4.4e-67	256.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34718.t1	A0A072U1W4	100.0	282	0	0	1	282	1	282	4.9e-136	493.4

TFs/TRs:

Gene ID	Type	Classification
MS.gene34718.t1	TF	HB-HD-ZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049340	MS.gene34718	0.805458	1.32E-49	-1.69E-46
MS.gene049341	MS.gene34718	0.815872	7.40E-52	-1.69E-46
MS.gene05045	MS.gene34718	0.803474	3.43E-49	-1.69E-46
MS.gene050807	MS.gene34718	0.822404	2.41E-53	-1.69E-46
MS.gene050808	MS.gene34718	0.802727	4.89E-49	-1.69E-46
MS.gene051719	MS.gene34718	0.832973	6.96E-56	-1.69E-46
MS.gene051720	MS.gene34718	0.827503	1.51E-54	-1.69E-46
MS.gene052133	MS.gene34718	0.822208	2.68E-53	-1.69E-46
MS.gene052516	MS.gene34718	0.819166	1.34E-52	-1.69E-46
MS.gene052665	MS.gene34718	0.807567	4.75E-50	-1.69E-46
MS.gene052732	MS.gene34718	0.804272	2.34E-49	-1.69E-46
MS.gene052879	MS.gene34718	0.839036	2.01E-57	-1.69E-46
MS.gene052880	MS.gene34718	0.831794	1.36E-55	-1.69E-46
MS.gene053144	MS.gene34718	0.836581	8.61E-57	-1.69E-46
MS.gene053581	MS.gene34718	0.836762	7.74E-57	-1.69E-46
MS.gene053597	MS.gene34718	0.80245	5.58E-49	-1.69E-46
MS.gene053599	MS.gene34718	0.819482	1.13E-52	-1.69E-46
MS.gene054584	MS.gene34718	0.81926	1.28E-52	-1.69E-46
MS.gene055465	MS.gene34718	0.802061	6.71E-49	-1.69E-46
MS.gene055466	MS.gene34718	0.815502	8.95E-52	-1.69E-46
MS.gene055468	MS.gene34718	0.800964	1.13E-48	-1.69E-46
MS.gene055537	MS.gene34718	0.813461	2.53E-51	-1.69E-46
MS.gene055580	MS.gene34718	-0.815319	9.83E-52	-1.69E-46
MS.gene055890	MS.gene34718	0.875412	3.14E-68	-1.69E-46
MS.gene055891	MS.gene34718	0.903081	5.01E-79	-1.69E-46
MS.gene059937	MS.gene34718	0.805237	1.47E-49	-1.69E-46
MS.gene060587	MS.gene34718	0.833671	4.67E-56	-1.69E-46
MS.gene061176	MS.gene34718	0.80506	1.60E-49	-1.69E-46
MS.gene061177	MS.gene34718	0.802739	4.86E-49	-1.69E-46
MS.gene061178	MS.gene34718	0.804628	1.97E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34718.t1	MTR_8g468210	100.000	282	0	0	1	282	1	282	0.0	586
MS.gene34718.t1	MTR_5g039000	81.818	286	42	6	1	282	4	283	1.68e-150	422
MS.gene34718.t1	MTR_6g011610	50.498	301	98	10	1	279	1	272	2.14e-84	254
MS.gene34718.t1	MTR_7g010020	52.465	284	113	9	1	275	1	271	5.01e-82	248
MS.gene34718.t1	MTR_6g011610	48.070	285	110	8	1	279	1	253	2.18e-75	231
MS.gene34718.t1	MTR_6g007647	64.948	97	34	0	76	172	32	128	2.72e-39	138
MS.gene34718.t1	MTR_3g086790	51.656	151	60	4	33	180	26	166	5.99e-39	138
MS.gene34718.t1	MTR_6g007647	64.948	97	34	0	76	172	66	162	8.36e-39	137
MS.gene34718.t1	MTR_3g080100	49.689	161	62	3	64	213	7	159	8.37e-38	133
MS.gene34718.t1	MTR_3g080100	49.689	161	62	3	64	213	46	198	1.32e-37	134
MS.gene34718.t1	MTR_5g038280	66.667	96	32	0	77	172	87	182	6.07e-37	134
MS.gene34718.t1	MTR_4g107650	58.475	118	46	2	52	169	73	187	1.21e-36	133
MS.gene34718.t1	MTR_8g089895	62.245	98	37	0	75	172	52	149	2.80e-36	132
MS.gene34718.t1	MTR_8g469430	65.625	96	33	0	77	172	89	184	4.74e-36	130
MS.gene34718.t1	MTR_7g103340	45.652	138	59	2	44	172	21	151	7.43e-33	120
MS.gene34718.t1	MTR_1g061660	52.830	106	41	2	65	170	49	145	8.73e-28	107
MS.gene34718.t1	MTR_3g092150	53.846	91	42	0	79	169	40	130	5.00e-27	105
MS.gene34718.t1	MTR_8g026960	38.000	150	82	3	84	222	41	190	6.00e-25	100
MS.gene34718.t1	MTR_4g100550	40.496	121	69	1	43	163	89	206	7.67e-21	90.1
MS.gene34718.t1	MTR_5g019650	46.809	94	50	0	77	170	53	146	2.97e-19	84.3
MS.gene34718.t1	MTR_5g019680	47.778	90	47	0	77	166	53	142	3.03e-19	84.0
MS.gene34718.t1	MTR_5g013010	41.463	123	70	2	43	163	100	222	9.19e-19	84.3
MS.gene34718.t1	MTR_4g097600	45.263	95	52	0	69	163	119	213	1.07e-18	84.0
MS.gene34718.t1	MTR_7g093430	46.939	98	48	1	77	174	160	253	4.26e-18	82.8
MS.gene34718.t1	MTR_5g014890	44.000	100	56	0	69	168	115	214	4.84e-18	82.0
MS.gene34718.t1	MTR_1g054285	42.609	115	62	1	60	174	137	247	5.62e-18	82.4
MS.gene34718.t1	MTR_2g061030	39.669	121	69	1	54	174	177	293	2.13e-17	81.3
MS.gene34718.t1	MTR_8g006705	46.739	92	49	0	77	168	146	237	2.95e-17	80.5
MS.gene34718.t1	MTR_4g126900	45.882	85	46	0	80	164	91	175	7.85e-17	77.8
MS.gene34718.t1	MTR_1g017090	45.455	88	48	0	77	164	130	217	1.43e-16	78.2
MS.gene34718.t1	MTR_4g084750	43.434	99	52	1	77	175	65	159	3.12e-15	72.8
MS.gene34718.t1	MTR_3g103590	48.611	72	37	0	77	148	145	216	5.54e-14	71.2
MS.gene34718.t1	MTR_5g013010	43.182	88	48	2	43	128	100	187	2.72e-12	65.1
MS.gene34718.t1	MTR_2g038625	37.615	109	64	2	59	163	60	168	1.22e-11	63.2
MS.gene34718.t1	MTR_2g038580	37.615	109	64	2	59	163	60	168	1.22e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34718.t1	AT1G69780	64.189	296	84	8	1	282	7	294	8.25e-120	345
MS.gene34718.t1	AT1G26960	55.363	289	81	9	1	282	8	255	5.04e-95	281
MS.gene34718.t1	AT3G01220	48.057	283	114	9	1	275	16	273	1.03e-74	230
MS.gene34718.t1	AT5G15150	44.300	307	111	11	1	275	22	300	1.42e-71	223
MS.gene34718.t1	AT4G40060	57.576	132	52	2	59	186	39	170	4.58e-40	141
MS.gene34718.t1	AT5G65310	48.824	170	70	4	52	206	19	186	7.30e-40	140
MS.gene34718.t1	AT5G65310	48.824	170	70	4	52	206	37	204	8.46e-40	141
MS.gene34718.t1	AT3G01470	48.052	154	65	1	34	172	10	163	5.89e-39	137
MS.gene34718.t1	AT2G22430	66.667	99	33	0	74	172	59	157	8.39e-39	138
MS.gene34718.t1	AT1G27045	40.306	196	94	5	8	195	12	192	2.56e-31	116
MS.gene34718.t1	AT1G27045	42.857	161	75	4	8	166	12	157	1.60e-29	112
MS.gene34718.t1	AT1G27045	48.800	125	58	1	77	195	17	141	3.92e-28	107
MS.gene34718.t1	AT1G27045	48.800	125	58	1	77	195	25	149	4.49e-28	107
MS.gene34718.t1	AT1G27045	48.800	125	58	1	77	195	25	149	4.49e-28	107
MS.gene34718.t1	AT2G46680	52.688	93	44	0	78	170	33	125	8.07e-28	108
MS.gene34718.t1	AT2G46680	53.333	90	42	0	78	167	33	122	4.46e-27	106
MS.gene34718.t1	AT3G61890	51.111	90	44	0	80	169	33	122	1.25e-25	102
MS.gene34718.t1	AT5G03790	52.273	88	42	0	77	164	77	164	1.55e-24	99.0
MS.gene34718.t1	AT5G03790	55.000	80	36	0	77	156	77	156	1.46e-23	95.5
MS.gene34718.t1	AT2G18550	46.341	123	56	3	77	196	61	176	1.61e-22	93.2
MS.gene34718.t1	AT2G36610	43.590	117	51	3	58	166	59	168	1.91e-22	92.0
MS.gene34718.t1	AT4G36740	48.544	103	46	1	68	170	46	141	6.84e-22	91.3
MS.gene34718.t1	AT4G36740	48.544	103	46	1	68	170	47	142	7.35e-22	91.3
MS.gene34718.t1	AT5G66700	45.378	119	56	2	61	172	57	173	3.34e-21	89.7
MS.gene34718.t1	AT5G53980	44.554	101	56	0	72	172	6	106	1.02e-20	86.7
MS.gene34718.t1	AT2G01430	43.396	106	60	0	58	163	120	225	4.93e-18	82.0
MS.gene34718.t1	AT5G47370	42.708	96	55	0	69	164	122	217	2.22e-17	80.5
MS.gene34718.t1	AT4G37790	41.228	114	63	1	61	174	110	219	3.81e-17	79.7
MS.gene34718.t1	AT2G22800	46.667	90	48	0	75	164	111	200	4.86e-17	79.3
MS.gene34718.t1	AT5G06710	43.434	99	56	0	66	164	179	277	8.08e-17	79.7
MS.gene34718.t1	AT4G17460	41.414	99	58	0	65	163	123	221	1.16e-16	78.6
MS.gene34718.t1	AT3G60390	42.991	107	57	1	64	170	149	251	1.59e-16	78.6
MS.gene34718.t1	AT2G44910	44.681	94	48	1	77	170	163	252	5.20e-15	74.3
MS.gene34718.t1	AT4G16780	42.157	102	55	1	69	170	121	218	8.78e-15	73.2
MS.gene34718.t1	AT1G70920	37.903	124	69	2	57	180	50	165	9.40e-15	71.6
MS.gene34718.t1	AT1G70920	37.903	124	69	2	57	180	20	135	1.69e-14	70.5
MS.gene34718.t1	AT2G01430	50.704	71	35	0	59	129	121	191	2.52e-13	67.8

Find 43 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCCTTCTGTTTCTTTATTA+AGG	0.139873	8.1:-45325021	None:intergenic
CATAGATCTCTTTCCTAAAA+AGG	0.254932	8.1:-45323981	None:intergenic
CTGAATGTCTTGTCTTGAAT+TGG	0.288821	8.1:-45325200	None:intergenic
AAGACAATATGATACTATTA+AGG	0.363112	8.1:+45324279	MS.gene34718:CDS
GTTTGTAGCATGAAATTTGC+TGG	0.365160	8.1:-45323647	None:intergenic
TCCGATGATGGATCACAGTT+AGG	0.393627	8.1:+45324055	MS.gene34718:CDS
GTCTTGAAGAAGATGGAAAT+AGG	0.399749	8.1:-45325147	None:intergenic
AGCCAAGACAGATTGCAATA+TGG	0.402938	8.1:+45324194	MS.gene34718:CDS
ATGCAGCTAGCAAGAGCTCT+TGG	0.439885	8.1:+45324166	MS.gene34718:CDS
TGGATGATCAATCTGGACTA+TGG	0.444127	8.1:+45325281	MS.gene34718:CDS
CCATCTTCTTCAAGACCAGC+AGG	0.460199	8.1:+45325154	MS.gene34718:CDS
CCGATGATGGATCACAGTTA+GGG	0.466027	8.1:+45324056	MS.gene34718:CDS
CTTGTCTGTTGAGTAGATAA+AGG	0.476490	8.1:-45325118	None:intergenic
AGCTGATGAGGAACTCCTGC+TGG	0.491266	8.1:-45325169	None:intergenic
TGTGCCATGGATGATCAATC+TGG	0.494499	8.1:+45325274	MS.gene34718:CDS
CAATATGGTTTCAAAACAGA+AGG	0.502644	8.1:+45324209	MS.gene34718:CDS
ATAATTGAGTTGAGTGAAGG+TGG	0.507171	8.1:-45323698	None:intergenic
AACCATATTGCAATCTGTCT+TGG	0.512659	8.1:-45324196	None:intergenic
CCTGCTGGTCTTGAAGAAGA+TGG	0.521993	8.1:-45325154	None:intergenic
ATCTGGACTATGGCCATGGT+TGG	0.522424	8.1:+45325291	MS.gene34718:CDS
TTAAGGTTGATTGATTCAGT+TGG	0.542418	8.1:-45325004	None:intergenic
CCCTAACTGTGATCCATCAT+CGG	0.548112	8.1:-45324056	None:intergenic
GAGGAAGAATTATCCGATGA+TGG	0.563562	8.1:+45324043	MS.gene34718:CDS
GGTTTCAAAACAGAAGGGCT+AGG	0.568856	8.1:+45324215	MS.gene34718:CDS
TAGTCCAGATTGATCATCCA+TGG	0.576768	8.1:-45325278	None:intergenic
TTGGTTTGAAAGAGCTGATG+AGG	0.592238	8.1:-45325181	None:intergenic
AAACAGTTCAGATATCAAGT+TGG	0.594453	8.1:+45325063	MS.gene34718:CDS
AACCTTAATAAAGAAACAGA+AGG	0.601474	8.1:+45325019	MS.gene34718:CDS
GTTATAATTGAGTTGAGTGA+AGG	0.601931	8.1:-45323701	None:intergenic
AGTTAGGGGAGAAGAAGAGA+AGG	0.602528	8.1:+45324071	MS.gene34718:CDS
GAAGAAGAGAAGGCTTAACA+TGG	0.612268	8.1:+45324081	MS.gene34718:CDS
ATCAATCTGGACTATGGCCA+TGG	0.615676	8.1:+45325287	MS.gene34718:CDS
AATATGGTTTCAAAACAGAA+GGG	0.618611	8.1:+45324210	MS.gene34718:CDS
ATTGAGTTGAGTGAAGGTGG+AGG	0.620969	8.1:-45323695	None:intergenic
AAGTGCTGTTGCTCCAACCA+TGG	0.633621	8.1:-45325304	None:intergenic
GTAATCTTGAGGTGCACATG+AGG	0.639812	8.1:-45323723	None:intergenic
GAAACAAGCTTGAACCTGAG+AGG	0.652955	8.1:+45324140	MS.gene34718:CDS
AAAGTACCATGGTAATCTTG+AGG	0.656226	8.1:-45323734	None:intergenic
TGGAGAAGAAGCGAATGTCG+AGG	0.659383	8.1:+45324024	MS.gene34718:CDS
CGATGATGGATCACAGTTAG+GGG	0.661316	8.1:+45324057	MS.gene34718:CDS
TTCAAAACAGAAGGGCTAGG+TGG	0.663747	8.1:+45324218	MS.gene34718:CDS
TGTGCACCTCAAGATTACCA+TGG	0.714676	8.1:+45323728	MS.gene34718:CDS
TCAAGTTGGATATTTCAACA+AGG	0.737704	8.1:+45325077	MS.gene34718:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTCTTTTTATATTCAAA+AGG	-	chr8.1:45324704-45324723	None:intergenic	10.0%
!!	TTATAAAAGTTATCATTAGT+TGG	-	chr8.1:45324769-45324788	None:intergenic	15.0%
!!!	TTAATTTTTTTACCAAAATG+AGG	-	chr8.1:45324861-45324880	None:intergenic	15.0%
!!	AAATTGATGAAAGGAAATAA+AGG	-	chr8.1:45324744-45324763	None:intergenic	20.0%
!!	AAGACAATATGATACTATTA+AGG	+	chr8.1:45324279-45324298	MS.gene34718:CDS	20.0%
!!	ACATTGCTAGATTTAAATAA+AGG	-	chr8.1:45323895-45323914	None:intergenic	20.0%
!!!	TAAAAAGCTTTTTTTTTGCT+TGG	-	chr8.1:45324919-45324938	None:intergenic	20.0%
!	AAAAATTGATCACATGGTTA+AGG	+	chr8.1:45325228-45325247	MS.gene34718:CDS	25.0%
!	AACCTTAATAAAGAAACAGA+AGG	+	chr8.1:45325019-45325038	MS.gene34718:CDS	25.0%
!	AATATGGTTTCAAAACAGAA+GGG	+	chr8.1:45324210-45324229	MS.gene34718:CDS	25.0%
!!	AAGAGATGTTCAAGTATTTT+GGG	+	chr8.1:45324584-45324603	MS.gene34718:intron	25.0%
!!	ATCCTTCTGTTTCTTTATTA+AGG	-	chr8.1:45325024-45325043	None:intergenic	25.0%
!!!	CATAATAGGTTTTAATGTTG+TGG	-	chr8.1:45323847-45323866	None:intergenic	25.0%
!!!	CTTTTAGAACAACATTAGAT+TGG	-	chr8.1:45324444-45324463	None:intergenic	25.0%
	AAACAGTTCAGATATCAAGT+TGG	+	chr8.1:45325063-45325082	MS.gene34718:CDS	30.0%
	AAAGAAAACATGTCATTGAG+TGG	-	chr8.1:45324828-45324847	None:intergenic	30.0%
	CAATATGGTTTCAAAACAGA+AGG	+	chr8.1:45324209-45324228	MS.gene34718:CDS	30.0%
	CATAGATCTCTTTCCTAAAA+AGG	-	chr8.1:45323984-45324003	None:intergenic	30.0%
	CATTAAAACCTATTATGTCG+TGG	+	chr8.1:45323850-45323869	MS.gene34718:intron	30.0%
	GAAAGTAACTGTCTAATGAT+AGG	-	chr8.1:45324806-45324825	None:intergenic	30.0%
	GTGTCAAAAAATTGATCACA+TGG	+	chr8.1:45325222-45325241	MS.gene34718:CDS	30.0%
!	ATGACATGTTTTCTTTTGCA+TGG	+	chr8.1:45324832-45324851	MS.gene34718:intron	30.0%
!	CAAGAGATGTTCAAGTATTT+TGG	+	chr8.1:45324583-45324602	MS.gene34718:intron	30.0%
!	TTAAGGTTGATTGATTCAGT+TGG	-	chr8.1:45325007-45325026	None:intergenic	30.0%
!!	CATGTTTTAAATGTTGATGC+AGG	+	chr8.1:45323947-45323966	MS.gene34718:intron	30.0%
!!	GTTATAATTGAGTTGAGTGA+AGG	-	chr8.1:45323704-45323723	None:intergenic	30.0%
!!	TAGTTGGTGAAATTGATGAA+AGG	-	chr8.1:45324753-45324772	None:intergenic	30.0%
!!	TCAAGTTGGATATTTCAACA+AGG	+	chr8.1:45325077-45325096	MS.gene34718:CDS	30.0%
!!!	AAGAGATCTATGTCATTTTC+AGG	+	chr8.1:45323992-45324011	MS.gene34718:CDS	30.0%
!!!	AGAGATCTATGTCATTTTCA+GGG	+	chr8.1:45323993-45324012	MS.gene34718:CDS	30.0%
	AACCATATTGCAATCTGTCT+TGG	-	chr8.1:45324199-45324218	None:intergenic	35.0%
	CTGAATGTCTTGTCTTGAAT+TGG	-	chr8.1:45325203-45325222	None:intergenic	35.0%
	CTTGTCTGTTGAGTAGATAA+AGG	-	chr8.1:45325121-45325140	None:intergenic	35.0%
	GAATCAAAAACTTCAGACTG+AGG	+	chr8.1:45324327-45324346	MS.gene34718:CDS	35.0%
	GTCTTGAAGAAGATGGAAAT+AGG	-	chr8.1:45325150-45325169	None:intergenic	35.0%
	GTTTGTAGCATGAAATTTGC+TGG	-	chr8.1:45323650-45323669	None:intergenic	35.0%
!	AAAGTACCATGGTAATCTTG+AGG	-	chr8.1:45323737-45323756	None:intergenic	35.0%
!	TCAATGCTTGTTGCAGATAT+TGG	+	chr8.1:45324964-45324983	MS.gene34718:intron	35.0%
!	TTTGCATGGTTTCCTCATTT+TGG	+	chr8.1:45324846-45324865	MS.gene34718:intron	35.0%
!!	ATAATTGAGTTGAGTGAAGG+TGG	-	chr8.1:45323701-45323720	None:intergenic	35.0%
!!	GTTTTAAATGTTGATGCAGG+AGG	+	chr8.1:45323950-45323969	MS.gene34718:intron	35.0%
!!	TCATTTTCAGGGATAGAACT+TGG	+	chr8.1:45324004-45324023	MS.gene34718:CDS	35.0%
!!	TCTAGAGAAAGAAAGTACCA+TGG	-	chr8.1:45323748-45323767	None:intergenic	35.0%
!!!	CTTGAGAAGAGTTTTGAGTT+AGG	+	chr8.1:45324118-45324137	MS.gene34718:CDS	35.0%
	AGCCAAGACAGATTGCAATA+TGG	+	chr8.1:45324194-45324213	MS.gene34718:CDS	40.0%
	GAAGAAGAGAAGGCTTAACA+TGG	+	chr8.1:45324081-45324100	MS.gene34718:CDS	40.0%
	GAGGAAGAATTATCCGATGA+TGG	+	chr8.1:45324043-45324062	MS.gene34718:CDS	40.0%
	TAGTCCAGATTGATCATCCA+TGG	-	chr8.1:45325281-45325300	None:intergenic	40.0%
	TGGATGATCAATCTGGACTA+TGG	+	chr8.1:45325281-45325300	MS.gene34718:CDS	40.0%
	TTAAATGTTGATGCAGGAGG+AGG	+	chr8.1:45323953-45323972	MS.gene34718:intron	40.0%
!	GAGTAACATGTTTTGTGCCA+TGG	+	chr8.1:45325261-45325280	MS.gene34718:CDS	40.0%
!	TTGGTTTGAAAGAGCTGATG+AGG	-	chr8.1:45325184-45325203	None:intergenic	40.0%
	AGTTAGGGGAGAAGAAGAGA+AGG	+	chr8.1:45324071-45324090	MS.gene34718:CDS	45.0%
	ATCAATCTGGACTATGGCCA+TGG	+	chr8.1:45325287-45325306	MS.gene34718:CDS	45.0%
	CCCTAACTGTGATCCATCAT+CGG	-	chr8.1:45324059-45324078	None:intergenic	45.0%
	CGACAAGAGCTGAATTTCAG+TGG	+	chr8.1:45324407-45324426	MS.gene34718:intron	45.0%
	GAAACAAGCTTGAACCTGAG+AGG	+	chr8.1:45324140-45324159	MS.gene34718:CDS	45.0%
	GATCTGAGCCACGACATAAT+AGG	-	chr8.1:45323861-45323880	None:intergenic	45.0%
	GGTTTCAAAACAGAAGGGCT+AGG	+	chr8.1:45324215-45324234	MS.gene34718:CDS	45.0%
	GTAATCTTGAGGTGCACATG+AGG	-	chr8.1:45323726-45323745	None:intergenic	45.0%
	TGTGCACCTCAAGATTACCA+TGG	+	chr8.1:45323728-45323747	MS.gene34718:CDS	45.0%
	TGTGCCATGGATGATCAATC+TGG	+	chr8.1:45325274-45325293	MS.gene34718:CDS	45.0%
	TTCAAAACAGAAGGGCTAGG+TGG	+	chr8.1:45324218-45324237	MS.gene34718:CDS	45.0%
!!	ATTGAGTTGAGTGAAGGTGG+AGG	-	chr8.1:45323698-45323717	None:intergenic	45.0%
!!	CCGATGATGGATCACAGTTA+GGG	+	chr8.1:45324056-45324075	MS.gene34718:CDS	45.0%
!!	CGATGATGGATCACAGTTAG+GGG	+	chr8.1:45324057-45324076	MS.gene34718:CDS	45.0%
!!	TCCGATGATGGATCACAGTT+AGG	+	chr8.1:45324055-45324074	MS.gene34718:CDS	45.0%
!!!	GGAGGAGGAGTATCCTTTTT+AGG	+	chr8.1:45323968-45323987	MS.gene34718:intron	45.0%
!!!	AATGTAATATTATTTTTTTA+TGG	+	chr8.1:45323910-45323929	MS.gene34718:intron	5.0%
!!!	ATGTAATATTATTTTTTTAT+GGG	+	chr8.1:45323911-45323930	MS.gene34718:intron	5.0%
	AACTGCAACTGAGGCTGCAT+CGG	-	chr8.1:45323812-45323831	None:intergenic	50.0%
	ATCTGGACTATGGCCATGGT+TGG	+	chr8.1:45325291-45325310	MS.gene34718:CDS	50.0%
	ATGCAGCTAGCAAGAGCTCT+TGG	+	chr8.1:45324166-45324185	MS.gene34718:CDS	50.0%
	CCATCTTCTTCAAGACCAGC+AGG	+	chr8.1:45325154-45325173	MS.gene34718:CDS	50.0%
	CGACAACACAACTGCAACTG+AGG	-	chr8.1:45323821-45323840	None:intergenic	50.0%
	TGGAGAAGAAGCGAATGTCG+AGG	+	chr8.1:45324024-45324043	MS.gene34718:CDS	50.0%
	TTATGTCGTGGCTCAGATCG+CGG	+	chr8.1:45323862-45323881	MS.gene34718:intron	50.0%
!	AAGTGCTGTTGCTCCAACCA+TGG	-	chr8.1:45325307-45325326	None:intergenic	50.0%
!	GCTAGCTGCATTTTCCTCTC+AGG	-	chr8.1:45324157-45324176	None:intergenic	50.0%
!!	CCTGCTGGTCTTGAAGAAGA+TGG	-	chr8.1:45325157-45325176	None:intergenic	50.0%
	AGCTGATGAGGAACTCCTGC+TGG	-	chr8.1:45325172-45325191	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	45323635	45325333	45323635	ID=MS.gene34718
chr8.1	mRNA	45323635	45325333	45323635	ID=MS.gene34718.t1;Parent=MS.gene34718
chr8.1	exon	45323635	45323749	45323635	ID=MS.gene34718.t1.exon1;Parent=MS.gene34718.t1
chr8.1	CDS	45323635	45323749	45323635	ID=cds.MS.gene34718.t1;Parent=MS.gene34718.t1
chr8.1	exon	45323969	45324348	45323969	ID=MS.gene34718.t1.exon2;Parent=MS.gene34718.t1
chr8.1	CDS	45323969	45324348	45323969	ID=cds.MS.gene34718.t1;Parent=MS.gene34718.t1
chr8.1	exon	45324980	45325333	45324980	ID=MS.gene34718.t1.exon3;Parent=MS.gene34718.t1
chr8.1	CDS	45324980	45325333	45324980	ID=cds.MS.gene34718.t1;Parent=MS.gene34718.t1

Gene Sequence

>MS.gene34718

ATGGCGTTCTTTCCAGCAAATTTCATGCTACAAACTTCTCATCAAGATGAACATCATCAACCTCCACCTTCACTCAACTCAATTATAACCTCATGTGCACCTCAAGATTACCATGGTACTTTCTTTCTCTAGAACACTCACATAAATATCGTGAAGAATTGTCGTTAAATGCATCCGATGCAGCCTCAGTTGCAGTTGTGTTGTCGTTACCACAACATTAAAACCTATTATGTCGTGGCTCAGATCGCGGTCAAAGACCTTTATTTAAATCTAGCAATGTAATATTATTTTTTTATGGGATGAAAGTGATAACATGTTTTAAATGTTGATGCAGGAGGAGGAGTATCCTTTTTAGGAAAGAGATCTATGTCATTTTCAGGGATAGAACTTGGAGAAGAAGCGAATGTCGAGGAAGAATTATCCGATGATGGATCACAGTTAGGGGAGAAGAAGAGAAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAGTTAGGAAACAAGCTTGAACCTGAGAGGAAAATGCAGCTAGCAAGAGCTCTTGGATTGCAGCCAAGACAGATTGCAATATGGTTTCAAAACAGAAGGGCTAGGTGGAAGACAAAACAGTTAGAGAAAGACTATGATGTTCTCAAAAGACAATATGATACTATTAAGGCTGATAATGATGCACTTCAAGCTCAGAATCAAAAACTTCAGACTGAGGTTTGTATTGTTACTTTTTATTCTTACTCATGATCTAAATTTTGTTAACGAATCTAAGCGACAAGAGCTGAATTTCAGTGGATACTGATGATCCAATCTAATGTTGTTCTAAAAGATTTGTTTTTTGTTATGTAAAATTTTCTAAAATTTTGATGTCAAAAAAGTAGAGAGAGATAGATAGATACATAAACAAAGTGTCACTTGAGATGTCTATATTTTGATTTTCAAATAACACAAGAGATGTTCAAGTATTTTGGGTCAACAAGAGATGTTATAAATTTGTGTTATGTGAGATGAGATTGTTTTGATCTTGTAGAAAATAAAGCTTGAGATCATGATGAGTAGTATTTTGCCTTTTGAATATAAAAAGAAATTTCATGATTTTAAGATAACCTTTATTTCCTTTCATCAATTTCACCAACTAATGATAACTTTTATAAAAAGCTGCTTTTTTCCTATCATTAGACAGTTACTTTCCACTCAATGACATGTTTTCTTTTGCATGGTTTCCTCATTTTGGTAAAAAAATTAATAATTTAATTCATCATAACATGAGAACTTTATAGTCCAAGCAAAAAAAAAGCTTTTTACTTGATTTTCAAATGTTACTAATTTTCAATGCTTGTTGCAGATATTGGCACTGAAAAATAGAGAACCAACTGAATCAATCAACCTTAATAAAGAAACAGAAGGATCAAGCAGCAACAGAAGTGAAAACAGTTCAGATATCAAGTTGGATATTTCAACAAGGACACAAGCTATTGATAGTCCTTTATCTACTCAACAGACAAGCATAAACCTATTTCCATCTTCTTCAAGACCAGCAGGAGTTCCTCATCAGCTCTTTCAAACCAATTCAAGACAAGACATTCAGTGTCAAAAAATTGATCACATGGTTAAGGAAGAGAGCTTGAGTAACATGTTTTGTGCCATGGATGATCAATCTGGACTATGGCCATGGTTGGAGCAACAGCACTTCAATTAA

Protein sequence

>MS.gene34718.t1

MAFFPANFMLQTSHQDEHHQPPPSLNSIITSCAPQDYHGGGVSFLGKRSMSFSGIELGEEANVEEELSDDGSQLGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDTIKADNDALQAQNQKLQTEILALKNREPTESINLNKETEGSSSNRSENSSDIKLDISTRTQAIDSPLSTQQTSINLFPSSSRPAGVPHQLFQTNSRQDIQCQKIDHMVKEESLSNMFCAMDDQSGLWPWLEQQHFN