Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049340.t1 | TKY73879.1 | 90.3 | 236 | 23 | 0 | 1 | 236 | 1 | 236 | 6.30E-74 | 287.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049340.t1 | Q99JH1 | 33.1 | 136 | 82 | 2 | 1 | 127 | 1 | 136 | 2.4e-13 | 77.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049340.t1 | A0A1S2YCM6 | 89.3 | 224 | 20 | 1 | 1 | 224 | 1 | 220 | 8.5e-73 | 283.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene049340 | 0.842872 | 1.98E-58 | -1.69E-46 |
| MS.gene049340 | MS.gene049341 | 0.913334 | 6.94E-84 | -1.69E-46 |
| MS.gene049340 | MS.gene050277 | 0.817771 | 2.77E-52 | -1.69E-46 |
| MS.gene049340 | MS.gene051328 | 0.807934 | 3.97E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene052133 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene052879 | 0.925034 | 3.17E-90 | -1.69E-46 |
| MS.gene049340 | MS.gene052880 | 0.91568 | 4.41E-85 | -1.69E-46 |
| MS.gene049340 | MS.gene055912 | 0.807446 | 5.03E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene057705 | 0.811651 | 6.29E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene058906 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene06001 | 0.808978 | 2.37E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene06172 | 0.808376 | 3.19E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene06371 | 0.826997 | 1.99E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene067521 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene067802 | 0.805563 | 1.26E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene06989 | 0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene07100 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene07217 | 0.822609 | 2.16E-53 | -1.69E-46 |
| MS.gene049340 | MS.gene07222 | 0.824972 | 6.04E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene073785 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene073827 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene08428 | 0.830099 | 3.55E-55 | -1.69E-46 |
| MS.gene049340 | MS.gene20740 | 0.828638 | 8.04E-55 | -1.69E-46 |
| MS.gene049340 | MS.gene22968 | 0.821861 | 3.22E-53 | -1.69E-46 |
| MS.gene049340 | MS.gene23058 | 0.832462 | 9.33E-56 | -1.69E-46 |
| MS.gene049340 | MS.gene23059 | 0.809295 | 2.03E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene24610 | 0.81616 | 6.38E-52 | -1.69E-46 |
| MS.gene049340 | MS.gene24930 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene25435 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene25436 | 0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene27668 | 0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene27991 | 0.807909 | 4.02E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene30863 | 0.807396 | 5.16E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene34718 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene35135 | 0.803922 | 2.77E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene35214 | 0.825718 | 4.02E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene40595 | 0.811844 | 5.71E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene40919 | 0.828467 | 8.85E-55 | -1.69E-46 |
| MS.gene049340 | MS.gene43992 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene44141 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene47955 | 0.810491 | 1.12E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene52075 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene52946 | 0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene54919 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene55732 | 0.812947 | 3.28E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene55887 | 0.824054 | 9.94E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene55988 | 0.80038 | 1.48E-48 | -1.69E-46 |
| MS.gene049340 | MS.gene56414 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene68735 | 0.83428 | 3.28E-56 | -1.69E-46 |
| MS.gene049340 | MS.gene69947 | 0.802035 | 6.79E-49 | -1.69E-46 |
| MS.gene049340 | MS.gene71215 | 0.810674 | 1.03E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene71949 | 0.812269 | 4.62E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene73243 | 0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene049340 | MS.gene84455 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene049340 | MS.gene86381 | 0.827559 | 1.46E-54 | -1.69E-46 |
| MS.gene049340 | MS.gene89036 | 0.822139 | 2.78E-53 | -1.69E-46 |
| MS.gene049340 | MS.gene89562 | 0.836863 | 7.29E-57 | -1.69E-46 |
| MS.gene049340 | MS.gene89721 | 0.810621 | 1.05E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene90981 | 0.840962 | 6.34E-58 | -1.69E-46 |
| MS.gene049340 | MS.gene95486 | 0.809758 | 1.61E-50 | -1.69E-46 |
| MS.gene049340 | MS.gene99657 | 0.800343 | 1.51E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049340.t1 | MTR_3g095260 | 99.111 | 225 | 2 | 0 | 1 | 225 | 1 | 225 | 7.87e-162 | 447 |
| MS.gene049340.t1 | MTR_3g095240 | 95.045 | 222 | 11 | 0 | 1 | 222 | 1 | 222 | 9.91e-114 | 326 |
| MS.gene049340.t1 | MTR_3g095250 | 95.429 | 175 | 6 | 1 | 1 | 173 | 1 | 175 | 1.25e-103 | 300 |
| MS.gene049340.t1 | MTR_7g059030 | 66.197 | 142 | 48 | 0 | 1 | 142 | 1 | 142 | 1.63e-62 | 199 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049340.t1 | AT1G76010 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 6.29e-73 | 226 |
| MS.gene049340.t1 | AT1G76010 | 77.027 | 148 | 33 | 1 | 1 | 147 | 1 | 148 | 6.29e-73 | 226 |
| MS.gene049340.t1 | AT1G20220 | 72.973 | 148 | 39 | 1 | 1 | 147 | 1 | 148 | 1.60e-69 | 216 |
| MS.gene049340.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.96e-57 | 187 |
| MS.gene049340.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 1.96e-57 | 187 |
| MS.gene049340.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 2.37e-57 | 187 |
| MS.gene049340.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 4.71e-57 | 186 |
| MS.gene049340.t1 | AT3G07030 | 65.185 | 135 | 47 | 0 | 1 | 135 | 1 | 135 | 5.21e-57 | 187 |
Find 79 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTTGAAACCTGAATTT+TGG | 0.124199 | 3.1:-76034887 | None:intergenic |
| AACACTTGGCCCCAAAATTC+AGG | 0.272752 | 3.1:+76034876 | MS.gene049340:CDS |
| CTGCATCAGAACACTCAAAT+TGG | 0.306654 | 3.1:+76033127 | MS.gene049340:CDS |
| CGGATCTCATTCTCGTTAAT+AGG | 0.320322 | 3.1:-76031358 | None:intergenic |
| GTTAATAGGACTATCTGCTT+TGG | 0.320437 | 3.1:-76031344 | None:intergenic |
| CGTGGAAGGGGCAGGGGTAG+AGG | 0.333283 | 3.1:+76034520 | MS.gene049340:CDS |
| GCAGAGGGCGCGTCCGTGCA+TGG | 0.343284 | 3.1:+76034754 | MS.gene049340:CDS |
| TTAATAGGACTATCTGCTTT+GGG | 0.344161 | 3.1:-76031343 | None:intergenic |
| AGGGGAAGGGGTCGTGGAAG+GGG | 0.344420 | 3.1:+76034508 | MS.gene049340:CDS |
| AGGGGTCGTGGAAGGGGCAG+GGG | 0.348078 | 3.1:+76034514 | MS.gene049340:CDS |
| AGGGGCAGGGGTAGAGGTAG+AGG | 0.349329 | 3.1:+76034526 | MS.gene049340:CDS |
| CTTCCCCTTCCTCGCATCCT+TGG | 0.356404 | 3.1:-76034493 | None:intergenic |
| CAGAGGGCGCGTCCGTGCAT+GGG | 0.370655 | 3.1:+76034755 | MS.gene049340:CDS |
| GAAGGGGTCGTGGAAGGGGC+AGG | 0.393845 | 3.1:+76034512 | MS.gene049340:CDS |
| GCTATGGTGCCCAGCCAGTT+GGG | 0.398432 | 3.1:+76034805 | MS.gene049340:CDS |
| CCATAGTCATACTGCCCAAC+TGG | 0.407567 | 3.1:-76034819 | None:intergenic |
| GGCTATGGTGCCCAGCCAGT+TGG | 0.409114 | 3.1:+76034804 | MS.gene049340:CDS |
| TCTTTATAGGAATGTACAAT+GGG | 0.414498 | 3.1:+76034685 | MS.gene049340:intron |
| CGAGGAAGGGGAAGGGGTCG+TGG | 0.418781 | 3.1:+76034502 | MS.gene049340:CDS |
| CGTGGACGGGGACGGGGCTA+TGG | 0.423409 | 3.1:+76034789 | MS.gene049340:CDS |
| AATGATTACCGAGCTAATAA+AGG | 0.426094 | 3.1:+76033005 | MS.gene049340:CDS |
| TATGGTGATGGTTGGGATGG+TGG | 0.427513 | 3.1:+76034717 | MS.gene049340:CDS |
| TGGGATGGTGGACGTGGCTA+TGG | 0.430740 | 3.1:+76034729 | MS.gene049340:CDS |
| CTTTGGGTTTCTCCACCCTC+TGG | 0.434627 | 3.1:-76031327 | None:intergenic |
| CCAGTTGGGCAGTATGACTA+TGG | 0.448789 | 3.1:+76034819 | MS.gene049340:CDS |
| AGTCATACTGCCCAACTGGC+TGG | 0.453355 | 3.1:-76034815 | None:intergenic |
| AGGATGCGAGGAAGGGGAAG+GGG | 0.457113 | 3.1:+76034496 | MS.gene049340:CDS |
| GGACGTGGCTATGGTGGCAG+AGG | 0.470972 | 3.1:+76034738 | MS.gene049340:CDS |
| CACCTCGTGGTAAGAACACT+TGG | 0.471776 | 3.1:+76034862 | MS.gene049340:CDS |
| AAGGGGAAGGGGTCGTGGAA+GGG | 0.475093 | 3.1:+76034507 | MS.gene049340:CDS |
| TTGTTTCAGAGAAGGATTGT+TGG | 0.483573 | 3.1:+76033103 | MS.gene049340:intron |
| GAAGGGGAAGGGGTCGTGGA+AGG | 0.485703 | 3.1:+76034506 | MS.gene049340:CDS |
| TCGTCTTCATATTCATTCAA+AGG | 0.488564 | 3.1:-76034366 | None:intergenic |
| CAAGGATGCGAGGAAGGGGA+AGG | 0.491586 | 3.1:+76034494 | MS.gene049340:CDS |
| TATGGAATATGGTGATGGTT+GGG | 0.502393 | 3.1:+76034710 | MS.gene049340:CDS |
| TTTACTTGATCAGCAGGAAG+AGG | 0.502624 | 3.1:-76034342 | None:intergenic |
| AAGGGGTCGTGGAAGGGGCA+GGG | 0.504582 | 3.1:+76034513 | MS.gene049340:CDS |
| GCTCACCAAGGATGCGAGGA+AGG | 0.509460 | 3.1:+76034488 | MS.gene049340:CDS |
| TTCTTTATAGGAATGTACAA+TGG | 0.517576 | 3.1:+76034684 | MS.gene049340:intron |
| GAAATTGTTGTCAAAGCAAT+GGG | 0.517640 | 3.1:+76032961 | MS.gene049340:CDS |
| GATGGTTGGGATGGTGGACG+TGG | 0.520396 | 3.1:+76034723 | MS.gene049340:CDS |
| GTTTCTCATCCTTCCTTGAG+TGG | 0.523264 | 3.1:-76031386 | None:intergenic |
| TACGTTGTCAAAGAAAGAGC+TGG | 0.523803 | 3.1:+76033328 | MS.gene049340:CDS |
| AAGGATGCGAGGAAGGGGAA+GGG | 0.527077 | 3.1:+76034495 | MS.gene049340:CDS |
| GTCATACTGCCCAACTGGCT+GGG | 0.531567 | 3.1:-76034814 | None:intergenic |
| GTGTTCTTACCACGAGGTGC+AGG | 0.539055 | 3.1:-76034858 | None:intergenic |
| TCACCAAGGATGCGAGGAAG+GGG | 0.548570 | 3.1:+76034490 | MS.gene049340:CDS |
| GAGCTGGATACATCCTCCAC+AGG | 0.550506 | 3.1:+76033344 | MS.gene049340:CDS |
| CTCACCAAGGATGCGAGGAA+GGG | 0.551388 | 3.1:+76034489 | MS.gene049340:CDS |
| GAATATGGTGATGGTTGGGA+TGG | 0.556459 | 3.1:+76034714 | MS.gene049340:CDS |
| GTATGGAATATGGTGATGGT+TGG | 0.556815 | 3.1:+76034709 | MS.gene049340:CDS |
| GATGGTGGACGTGGCTATGG+TGG | 0.564025 | 3.1:+76034732 | MS.gene049340:CDS |
| GGAAGAAGGCCTTCTTCTAG+TGG | 0.564318 | 3.1:-76033178 | None:intergenic |
| CAACTGATATAACTGACACA+TGG | 0.565866 | 3.1:+76033152 | MS.gene049340:CDS |
| GACGTGGCTATGGTGGCAGA+GGG | 0.566506 | 3.1:+76034739 | MS.gene049340:CDS |
| AGAGGGCGCGTCCGTGCATG+GGG | 0.580204 | 3.1:+76034756 | MS.gene049340:CDS |
| GTTACTAACTTGGAAAAGAG+TGG | 0.580916 | 3.1:-76031425 | None:intergenic |
| TGAAATTGTTGTCAAAGCAA+TGG | 0.584923 | 3.1:+76032960 | MS.gene049340:CDS |
| AATGAATATGAAGACGAAGG+AGG | 0.585192 | 3.1:+76034372 | MS.gene049340:CDS |
| TCCTTCCTTGAGTGGTAATG+CGG | 0.591117 | 3.1:-76031378 | None:intergenic |
| ACTTGATCAGCAGGAAGAGG+AGG | 0.596674 | 3.1:-76034339 | None:intergenic |
| TTCTTACCACGAGGTGCAGG+TGG | 0.600530 | 3.1:-76034855 | None:intergenic |
| AACTGATATAACTGACACAT+GGG | 0.600887 | 3.1:+76033153 | MS.gene049340:CDS |
| GAGATCCGCATTACCACTCA+AGG | 0.607382 | 3.1:+76031373 | MS.gene049340:CDS |
| ACATGGGAACCACTAGAAGA+AGG | 0.607454 | 3.1:+76033169 | MS.gene049340:CDS |
| GATGGATAGGTACCAGAGGG+TGG | 0.622819 | 3.1:+76031315 | None:intergenic |
| TCCGCATTACCACTCAAGGA+AGG | 0.635560 | 3.1:+76031377 | MS.gene049340:CDS |
| GAAGGCTCACCAAGGATGCG+AGG | 0.637231 | 3.1:+76034484 | MS.gene049340:intron |
| TTGAATGAATATGAAGACGA+AGG | 0.641784 | 3.1:+76034369 | MS.gene049340:CDS |
| TTTATAGGAATGTACAATGG+GGG | 0.652876 | 3.1:+76034687 | MS.gene049340:intron |
| GAAAAGCATGACCCCATGCA+CGG | 0.654179 | 3.1:-76034767 | None:intergenic |
| TGAAAGTACATACCCTGTGG+AGG | 0.656547 | 3.1:-76033357 | None:intergenic |
| TTCAGATGGATAGGTACCAG+AGG | 0.660290 | 3.1:+76031311 | None:intergenic |
| TCAGATGGATAGGTACCAGA+GGG | 0.661722 | 3.1:+76031312 | None:intergenic |
| TTGAAACAGAAGGCTCACCA+AGG | 0.665147 | 3.1:+76034476 | MS.gene049340:intron |
| AGCTGGATACATCCTCCACA+GGG | 0.668533 | 3.1:+76033345 | MS.gene049340:CDS |
| GGCCAAGTGTTCTTACCACG+AGG | 0.680457 | 3.1:-76034864 | None:intergenic |
| CTTTATAGGAATGTACAATG+GGG | 0.683519 | 3.1:+76034686 | MS.gene049340:intron |
| GATGCACCACCTGCACCTCG+TGG | 0.692747 | 3.1:+76034849 | MS.gene049340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGAAAGAAATTTTTAA+AGG | - | chr3.1:76031868-76031887 | None:intergenic | 10.0% |
| !!! | AATTGAAAGAAATTTTTAAA+GGG | - | chr3.1:76031867-76031886 | None:intergenic | 10.0% |
| !!! | TAAAAATTTCTTTCAATTTT+TGG | + | chr3.1:76031869-76031888 | MS.gene049340:intron | 10.0% |
| !!! | TATTAACTAATGATATTTTT+TGG | - | chr3.1:76032010-76032029 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTTATTCTTTGT+TGG | + | chr3.1:76034272-76034291 | MS.gene049340:intron | 10.0% |
| !! | ATTGAAAACAAAAAGTTTAA+AGG | - | chr3.1:76031896-76031915 | None:intergenic | 15.0% |
| !!! | ATTTAACCCTTTAATTTTTA+AGG | - | chr3.1:76031806-76031825 | None:intergenic | 15.0% |
| !!! | GTTATTAAAACTTGAATTTT+TGG | - | chr3.1:76031782-76031801 | None:intergenic | 15.0% |
| !!! | TTTAACCCTTTAATTTTTAA+GGG | - | chr3.1:76031805-76031824 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAACACTAAAGC+AGG | - | chr3.1:76031926-76031945 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACACTAAAGCA+GGG | - | chr3.1:76031925-76031944 | None:intergenic | 20.0% |
| !! | AATAACCCCTTAAAAATTAA+AGG | + | chr3.1:76031796-76031815 | MS.gene049340:intron | 20.0% |
| !! | ATAACCCCTTAAAAATTAAA+GGG | + | chr3.1:76031797-76031816 | MS.gene049340:intron | 20.0% |
| !! | ATGTAACAAAAGAAGTTATT+TGG | - | chr3.1:76031974-76031993 | None:intergenic | 20.0% |
| !! | ATTAAGTAAACATTAACCAA+CGG | - | chr3.1:76032817-76032836 | None:intergenic | 20.0% |
| !! | ATTGAAATCAGAAAATTTAG+AGG | + | chr3.1:76032205-76032224 | MS.gene049340:intron | 20.0% |
| !! | GCTAAATATATAGTTAAGAA+TGG | + | chr3.1:76033634-76033653 | MS.gene049340:intron | 20.0% |
| !! | TAAAGATAAAATAAGTACAG+AGG | - | chr3.1:76034086-76034105 | None:intergenic | 20.0% |
| !! | TTAAGTTATTGTTACTAACT+TGG | - | chr3.1:76031438-76031457 | None:intergenic | 20.0% |
| !! | TTCGATATTAAAAAGACAAA+GGG | - | chr3.1:76033877-76033896 | None:intergenic | 20.0% |
| !!! | AAAACTTGAATTTTTGGTTT+AGG | - | chr3.1:76031776-76031795 | None:intergenic | 20.0% |
| !!! | AACTATAATTTTGAAACAGA+AGG | + | chr3.1:76034466-76034485 | MS.gene049340:intron | 20.0% |
| !!! | AATAATTTTTATCTTGCTAC+AGG | + | chr3.1:76033670-76033689 | MS.gene049340:intron | 20.0% |
| !!! | CTGTACTTATTTTATCTTTA+TGG | + | chr3.1:76034086-76034105 | MS.gene049340:intron | 20.0% |
| !!! | GTTTATGTATTTTAGAAACA+AGG | + | chr3.1:76033906-76033925 | MS.gene049340:intron | 20.0% |
| !!! | TCTGTTTTCTGTAATTATTA+AGG | + | chr3.1:76034180-76034199 | MS.gene049340:intron | 20.0% |
| !!! | TTAACCCTTTAATTTTTAAG+GGG | - | chr3.1:76031804-76031823 | None:intergenic | 20.0% |
| !!! | TTTTATGACATATAACTGAT+AGG | - | chr3.1:76032147-76032166 | None:intergenic | 20.0% |
| ! | AAAAATAACTAAGCCTATCA+AGG | - | chr3.1:76033439-76033458 | None:intergenic | 25.0% |
| ! | AAAATAACTAAGCCTATCAA+GGG | - | chr3.1:76033438-76033457 | None:intergenic | 25.0% |
| ! | AAAGCATATAGAACAAAATG+TGG | - | chr3.1:76031684-76031703 | None:intergenic | 25.0% |
| ! | AAATACAATAAACCTAGACA+AGG | + | chr3.1:76032443-76032462 | MS.gene049340:intron | 25.0% |
| ! | AAGTGAAAATAAGAAAGTGA+TGG | - | chr3.1:76032762-76032781 | None:intergenic | 25.0% |
| ! | AATACAATAAACCTAGACAA+GGG | + | chr3.1:76032444-76032463 | MS.gene049340:intron | 25.0% |
| ! | AGTGAAAATAAGAAAGTGAT+GGG | - | chr3.1:76032761-76032780 | None:intergenic | 25.0% |
| ! | CAAATCTTACAGAATTACAA+CGG | - | chr3.1:76033599-76033618 | None:intergenic | 25.0% |
| ! | CTACACAATCTATTCTTTAT+AGG | + | chr3.1:76034672-76034691 | MS.gene049340:intron | 25.0% |
| ! | GTAAAGGTGATATATTTAGA+GGG | - | chr3.1:76031836-76031855 | None:intergenic | 25.0% |
| ! | GTTCGATATTAAAAAGACAA+AGG | - | chr3.1:76033878-76033897 | None:intergenic | 25.0% |
| ! | GTTGTAATTCTGTAAGATTT+GGG | + | chr3.1:76033598-76033617 | MS.gene049340:intron | 25.0% |
| ! | TCGATATTAAAAAGACAAAG+GGG | - | chr3.1:76033876-76033895 | None:intergenic | 25.0% |
| ! | TCTTTATAGGAATGTACAAT+GGG | + | chr3.1:76034685-76034704 | MS.gene049340:intron | 25.0% |
| ! | TTACTTGAATGTGTTATCTT+TGG | + | chr3.1:76033954-76033973 | MS.gene049340:intron | 25.0% |
| ! | TTCTTTATAGGAATGTACAA+TGG | + | chr3.1:76034684-76034703 | MS.gene049340:intron | 25.0% |
| ! | TTGTAATTCTGTAAGATTTG+GGG | + | chr3.1:76033599-76033618 | MS.gene049340:intron | 25.0% |
| ! | TTTGCTTACTTAACTGTAAT+CGG | + | chr3.1:76034567-76034586 | MS.gene049340:intron | 25.0% |
| !! | AAAAAGGTATAAAGGATACA+AGG | - | chr3.1:76031753-76031772 | None:intergenic | 25.0% |
| !! | AAAATCGAAGGAATTTTTGT+AGG | + | chr3.1:76032232-76032251 | MS.gene049340:intron | 25.0% |
| !! | AAATCGAAGGAATTTTTGTA+GGG | + | chr3.1:76032233-76032252 | MS.gene049340:intron | 25.0% |
| !! | ACAAAAATTCCTTCGATTTT+TGG | - | chr3.1:76032232-76032251 | None:intergenic | 25.0% |
| !! | ATATCTTGAAACCTGAATTT+TGG | - | chr3.1:76034890-76034909 | None:intergenic | 25.0% |
| !! | TATCTTGAAACCTGAATTTT+GGG | - | chr3.1:76034889-76034908 | None:intergenic | 25.0% |
| !! | TTTGATTGCTATTAATGCAT+TGG | + | chr3.1:76034139-76034158 | MS.gene049340:intron | 25.0% |
| !!! | CTTAAAGTTGGTATATTTAG+AGG | + | chr3.1:76032263-76032282 | MS.gene049340:intron | 25.0% |
| !!! | GAATTTTTGGTTTAGGAAAA+AGG | - | chr3.1:76031769-76031788 | None:intergenic | 25.0% |
| !!! | TGGTTTTATATAAATGTGAC+CGG | - | chr3.1:76032398-76032417 | None:intergenic | 25.0% |
| !!! | TTTTAAAAGCTCAGAAATTG+TGG | - | chr3.1:76033774-76033793 | None:intergenic | 25.0% |
| AACCAAAGAATAAGCAAATC+AGG | - | chr3.1:76031600-76031619 | None:intergenic | 30.0% | |
| AACTGATATAACTGACACAT+GGG | + | chr3.1:76033153-76033172 | MS.gene049340:CDS | 30.0% | |
| AAGATAGAAAACAGAAGTGA+TGG | + | chr3.1:76032583-76032602 | MS.gene049340:intron | 30.0% | |
| AATGATTACCGAGCTAATAA+AGG | + | chr3.1:76033005-76033024 | MS.gene049340:CDS | 30.0% | |
| ATAGGACGTTAAAATAGCAT+TGG | - | chr3.1:76032129-76032148 | None:intergenic | 30.0% | |
| ATGATTGAAACATAGCATCA+TGG | + | chr3.1:76032419-76032438 | MS.gene049340:intron | 30.0% | |
| ATTCAATGTCAATACATGCA+TGG | + | chr3.1:76031524-76031543 | MS.gene049340:intron | 30.0% | |
| ATTCTTTGGTTGAAATAGCT+TGG | + | chr3.1:76031609-76031628 | MS.gene049340:intron | 30.0% | |
| ATTGTGGTTCAATAAAACCT+TGG | - | chr3.1:76033758-76033777 | None:intergenic | 30.0% | |
| CAAATGATTTATGTGTGCAT+GGG | + | chr3.1:76033234-76033253 | MS.gene049340:intron | 30.0% | |
| CATACTTGTAAATCATGACT+GGG | - | chr3.1:76034206-76034225 | None:intergenic | 30.0% | |
| CGTAAAGGTGATATATTTAG+AGG | - | chr3.1:76031837-76031856 | None:intergenic | 30.0% | |
| CGTTGTAATTCTGTAAGATT+TGG | + | chr3.1:76033597-76033616 | MS.gene049340:intron | 30.0% | |
| CTGAAAACACAAATTTCACT+TGG | - | chr3.1:76031647-76031666 | None:intergenic | 30.0% | |
| CTTTATAGGAATGTACAATG+GGG | + | chr3.1:76034686-76034705 | MS.gene049340:intron | 30.0% | |
| GAAATTGTTGTCAAAGCAAT+GGG | + | chr3.1:76032961-76032980 | MS.gene049340:CDS | 30.0% | |
| GATGCTATGTTTCAATCATT+TGG | - | chr3.1:76032418-76032437 | None:intergenic | 30.0% | |
| GTGAAAATAAGAAAGTGATG+GGG | - | chr3.1:76032760-76032779 | None:intergenic | 30.0% | |
| TAGGGACTAAAACTTAAAGT+TGG | + | chr3.1:76032251-76032270 | MS.gene049340:intron | 30.0% | |
| TCAAATGATTTATGTGTGCA+TGG | + | chr3.1:76033233-76033252 | MS.gene049340:intron | 30.0% | |
| TCGTCTTCATATTCATTCAA+AGG | - | chr3.1:76034369-76034388 | None:intergenic | 30.0% | |
| TGAAAATAAGAAAGTGATGG+GGG | - | chr3.1:76032759-76032778 | None:intergenic | 30.0% | |
| TGAAATTGTTGTCAAAGCAA+TGG | + | chr3.1:76032960-76032979 | MS.gene049340:CDS | 30.0% | |
| TGTCATAAAAAAATGTCGCT+TGG | + | chr3.1:76032157-76032176 | MS.gene049340:intron | 30.0% | |
| TGTTGAATCAGAATTGAGAA+AGG | + | chr3.1:76033731-76033750 | MS.gene049340:intron | 30.0% | |
| TTAAAGGGACTAAAACGTAA+AGG | - | chr3.1:76031852-76031871 | None:intergenic | 30.0% | |
| TTAATAGGACTATCTGCTTT+GGG | - | chr3.1:76031346-76031365 | None:intergenic | 30.0% | |
| TTCAATGTCAATACATGCAT+GGG | + | chr3.1:76031525-76031544 | MS.gene049340:intron | 30.0% | |
| TTGAATGAATATGAAGACGA+AGG | + | chr3.1:76034369-76034388 | MS.gene049340:CDS | 30.0% | |
| TTTATAGGAATGTACAATGG+GGG | + | chr3.1:76034687-76034706 | MS.gene049340:intron | 30.0% | |
| ! | ATCACTTCTGTTTTCTATCT+TGG | - | chr3.1:76032584-76032603 | None:intergenic | 30.0% |
| ! | ATCTTGAAACCTGAATTTTG+GGG | - | chr3.1:76034888-76034907 | None:intergenic | 30.0% |
| ! | GGTTTAGGAAAAAGGTATAA+AGG | - | chr3.1:76031761-76031780 | None:intergenic | 30.0% |
| !! | AAGAAGTGTATGTGTTTTAG+AGG | + | chr3.1:76031562-76031581 | MS.gene049340:intron | 30.0% |
| !!! | TGTCTAATATGCCATTTTTG+TGG | - | chr3.1:76032695-76032714 | None:intergenic | 30.0% |
| AAAAATGCCAACCAATTCAC+TGG | - | chr3.1:76033051-76033070 | None:intergenic | 35.0% | |
| AATGAATATGAAGACGAAGG+AGG | + | chr3.1:76034372-76034391 | MS.gene049340:CDS | 35.0% | |
| ACAATATCATGTAAAGAGCC+TGG | + | chr3.1:76032478-76032497 | MS.gene049340:intron | 35.0% | |
| AGAGGAAACAAAAAGCCATA+CGG | - | chr3.1:76033202-76033221 | None:intergenic | 35.0% | |
| ATTACCGAGCTAATAAAGGT+GGG | + | chr3.1:76033009-76033028 | MS.gene049340:intron | 35.0% | |
| ATTTCTATTCACCCTTGTCT+AGG | - | chr3.1:76032458-76032477 | None:intergenic | 35.0% | |
| CAACTGATATAACTGACACA+TGG | + | chr3.1:76033152-76033171 | MS.gene049340:CDS | 35.0% | |
| CATTTGACAAGATAGCATAG+AGG | - | chr3.1:76033220-76033239 | None:intergenic | 35.0% | |
| CCAGTCATGATTTACAAGTA+TGG | + | chr3.1:76034204-76034223 | MS.gene049340:intron | 35.0% | |
| CCATACTTGTAAATCATGAC+TGG | - | chr3.1:76034207-76034226 | None:intergenic | 35.0% | |
| CTTAGTCAACTCCACAAAAA+TGG | + | chr3.1:76032681-76032700 | MS.gene049340:intron | 35.0% | |
| CTTTCTACTTGTTTCAGAGA+AGG | + | chr3.1:76033095-76033114 | MS.gene049340:intron | 35.0% | |
| GATATCTCTATCCAGTGAAT+TGG | + | chr3.1:76033037-76033056 | MS.gene049340:intron | 35.0% | |
| GCAATCAAAAGCGAAACTAA+AGG | - | chr3.1:76034128-76034147 | None:intergenic | 35.0% | |
| GGAACATGAAACGTAAACAT+TGG | - | chr3.1:76031953-76031972 | None:intergenic | 35.0% | |
| GTGTTCACAAAACAAAGAGA+CGG | - | chr3.1:76033854-76033873 | None:intergenic | 35.0% | |
| GTTAATAGGACTATCTGCTT+TGG | - | chr3.1:76031347-76031366 | None:intergenic | 35.0% | |
| GTTACTAACTTGGAAAAGAG+TGG | - | chr3.1:76031428-76031447 | None:intergenic | 35.0% | |
| TCAATGTCAATACATGCATG+GGG | + | chr3.1:76031526-76031545 | MS.gene049340:intron | 35.0% | |
| TGTTCACAAAACAAAGAGAC+GGG | - | chr3.1:76033853-76033872 | None:intergenic | 35.0% | |
| TTGGTTGAAATAGCTTGGAT+TGG | + | chr3.1:76031614-76031633 | MS.gene049340:intron | 35.0% | |
| TTGTTTCAGAGAAGGATTGT+TGG | + | chr3.1:76033103-76033122 | MS.gene049340:intron | 35.0% | |
| TTTAGAGGACCAAAAATCGA+AGG | + | chr3.1:76032220-76032239 | MS.gene049340:intron | 35.0% | |
| ! | AAAGGTTTTACTTGATCAGC+AGG | - | chr3.1:76034351-76034370 | None:intergenic | 35.0% |
| ! | ATTGTTACTCTCCTTTTACC+AGG | - | chr3.1:76032499-76032518 | None:intergenic | 35.0% |
| ! | CATTTTTGTGGAGTTGACTA+AGG | - | chr3.1:76032683-76032702 | None:intergenic | 35.0% |
| ! | GTATATTTTCGTTCTTCCGT+TGG | + | chr3.1:76032798-76032817 | MS.gene049340:intron | 35.0% |
| ! | TCAACATGTGTGTTTTCTGT+AGG | + | chr3.1:76032924-76032943 | MS.gene049340:intron | 35.0% |
| ! | TGTGTTTTACTTGCTCAGTT+TGG | + | chr3.1:76033274-76033293 | MS.gene049340:intron | 35.0% |
| !! | CTGACAGTCTATTTCTATCT+TGG | - | chr3.1:76032632-76032651 | None:intergenic | 35.0% |
| !! | TATGGAATATGGTGATGGTT+GGG | + | chr3.1:76034710-76034729 | MS.gene049340:CDS | 35.0% |
| !! | TGCCTGATTTGCTTATTCTT+TGG | + | chr3.1:76031595-76031614 | MS.gene049340:intron | 35.0% |
| ACAAAAAGCCATACGGAAGA+AGG | - | chr3.1:76033195-76033214 | None:intergenic | 40.0% | |
| ACACTATCTTCAGTCGTTGT+GGG | + | chr3.1:76032712-76032731 | MS.gene049340:intron | 40.0% | |
| ACTAAGCCTATCAAGGGATA+AGG | - | chr3.1:76033432-76033451 | None:intergenic | 40.0% | |
| CAATGTCAATACATGCATGG+GGG | + | chr3.1:76031527-76031546 | MS.gene049340:intron | 40.0% | |
| CATGTAAAGAGCCTGGTAAA+AGG | + | chr3.1:76032485-76032504 | MS.gene049340:intron | 40.0% | |
| CGGATCTCATTCTCGTTAAT+AGG | - | chr3.1:76031361-76031380 | None:intergenic | 40.0% | |
| CTAAGGCCTAAAACCTAAGA+TGG | - | chr3.1:76032666-76032685 | None:intergenic | 40.0% | |
| CTGCATCAGAACACTCAAAT+TGG | + | chr3.1:76033127-76033146 | MS.gene049340:CDS | 40.0% | |
| CTTACAGAATTACAACGGCT+AGG | - | chr3.1:76033594-76033613 | None:intergenic | 40.0% | |
| GATATCTGCATGAGGAAATC+AGG | - | chr3.1:76034317-76034336 | None:intergenic | 40.0% | |
| GATTACCGAGCTAATAAAGG+TGG | + | chr3.1:76033008-76033027 | MS.gene049340:intron | 40.0% | |
| TACGTTGTCAAAGAAAGAGC+TGG | + | chr3.1:76033328-76033347 | MS.gene049340:CDS | 40.0% | |
| TAGATGCCTTATCCCTTGAT+AGG | + | chr3.1:76033423-76033442 | MS.gene049340:intron | 40.0% | |
| TCAGAATTGAGAAAGGACCA+AGG | + | chr3.1:76033738-76033757 | MS.gene049340:intron | 40.0% | |
| TCTCTATCCAGTGAATTGGT+TGG | + | chr3.1:76033041-76033060 | MS.gene049340:intron | 40.0% | |
| TTACCGAGCTAATAAAGGTG+GGG | + | chr3.1:76033010-76033029 | MS.gene049340:intron | 40.0% | |
| TTTACTTGATCAGCAGGAAG+AGG | - | chr3.1:76034345-76034364 | None:intergenic | 40.0% | |
| ! | AAATAAGAAAGTGATGGGGG+AGG | - | chr3.1:76032756-76032775 | None:intergenic | 40.0% |
| ! | AAATAGACTGTCAGAGCATC+TGG | + | chr3.1:76032638-76032657 | MS.gene049340:intron | 40.0% |
| ! | ACCTTTGACTTCAAACAGAG+CGG | + | chr3.1:76034040-76034059 | MS.gene049340:intron | 40.0% |
| ! | CTGGTACCATCTTAGGTTTT+AGG | + | chr3.1:76032657-76032676 | MS.gene049340:intron | 40.0% |
| ! | GTGTGTTTTCTGTAGGAGAA+AGG | + | chr3.1:76032931-76032950 | MS.gene049340:intron | 40.0% |
| ! | TACAATGGGGGTATGGAATA+TGG | + | chr3.1:76034699-76034718 | MS.gene049340:CDS | 40.0% |
| ! | TCATGAAAGTACATACCCTG+TGG | - | chr3.1:76033363-76033382 | None:intergenic | 40.0% |
| ! | TTCTGTAAGATTTGGGGTCA+CGG | + | chr3.1:76033605-76033624 | MS.gene049340:intron | 40.0% |
| !! | GTATGGAATATGGTGATGGT+TGG | + | chr3.1:76034709-76034728 | MS.gene049340:CDS | 40.0% |
| AACACTTGGCCCCAAAATTC+AGG | + | chr3.1:76034876-76034895 | MS.gene049340:CDS | 45.0% | |
| ACAAAACAAAGAGACGGGTG+AGG | - | chr3.1:76033848-76033867 | None:intergenic | 45.0% | |
| ACATGGGAACCACTAGAAGA+AGG | + | chr3.1:76033169-76033188 | MS.gene049340:CDS | 45.0% | |
| AGGAATGTACAATGGGGGTA+TGG | + | chr3.1:76034692-76034711 | MS.gene049340:intron | 45.0% | |
| AGTGCACTGTCTAGAAAGAC+CGG | + | chr3.1:76032376-76032395 | MS.gene049340:intron | 45.0% | |
| GACACTATCTTCAGTCGTTG+TGG | + | chr3.1:76032711-76032730 | MS.gene049340:intron | 45.0% | |
| GTTTCTCATCCTTCCTTGAG+TGG | - | chr3.1:76031389-76031408 | None:intergenic | 45.0% | |
| TACCGAGCTAATAAAGGTGG+GGG | + | chr3.1:76033011-76033030 | MS.gene049340:intron | 45.0% | |
| TTGAAACAGAAGGCTCACCA+AGG | + | chr3.1:76034476-76034495 | MS.gene049340:intron | 45.0% | |
| ! | AAAGTGATGGGGGAGGATAT+TGG | - | chr3.1:76032749-76032768 | None:intergenic | 45.0% |
| ! | AAGTGATGGGGGAGGATATT+GGG | - | chr3.1:76032748-76032767 | None:intergenic | 45.0% |
| ! | ACCGCTCTGTTTGAAGTCAA+AGG | - | chr3.1:76034044-76034063 | None:intergenic | 45.0% |
| ! | AGAGCATCTGGTACCATCTT+AGG | + | chr3.1:76032650-76032669 | MS.gene049340:intron | 45.0% |
| ! | GTGCATGGGTGTGATTGTTT+TGG | + | chr3.1:76033248-76033267 | MS.gene049340:intron | 45.0% |
| ! | TCCTTCCTTGAGTGGTAATG+CGG | - | chr3.1:76031381-76031400 | None:intergenic | 45.0% |
| ! | TGAAAGTACATACCCTGTGG+AGG | - | chr3.1:76033360-76033379 | None:intergenic | 45.0% |
| !! | AGGAGGTTGATATCTGCATG+AGG | - | chr3.1:76034325-76034344 | None:intergenic | 45.0% |
| !! | GAATATGGTGATGGTTGGGA+TGG | + | chr3.1:76034714-76034733 | MS.gene049340:CDS | 45.0% |
| AAACAAAGAGACGGGTGAGG+TGG | - | chr3.1:76033845-76033864 | None:intergenic | 50.0% | |
| AACAAAGAGACGGGTGAGGT+GGG | - | chr3.1:76033844-76033863 | None:intergenic | 50.0% | |
| ACCCCCCACCTTTATTAGCT+CGG | - | chr3.1:76033016-76033035 | None:intergenic | 50.0% | |
| ACCGAGCTAATAAAGGTGGG+GGG | + | chr3.1:76033012-76033031 | MS.gene049340:intron | 50.0% | |
| ACTTGATCAGCAGGAAGAGG+AGG | - | chr3.1:76034342-76034361 | None:intergenic | 50.0% | |
| AGCTGGATACATCCTCCACA+GGG | + | chr3.1:76033345-76033364 | MS.gene049340:CDS | 50.0% | |
| CACCTCGTGGTAAGAACACT+TGG | + | chr3.1:76034862-76034881 | MS.gene049340:CDS | 50.0% | |
| CCAGTTGGGCAGTATGACTA+TGG | + | chr3.1:76034819-76034838 | MS.gene049340:CDS | 50.0% | |
| CCATAGTCATACTGCCCAAC+TGG | - | chr3.1:76034822-76034841 | None:intergenic | 50.0% | |
| GAAGAAGGCCTTCTTCCGTA+TGG | + | chr3.1:76033184-76033203 | MS.gene049340:intron | 50.0% | |
| GAGATCCGCATTACCACTCA+AGG | + | chr3.1:76031373-76031392 | MS.gene049340:CDS | 50.0% | |
| GGAAGAAGGCCTTCTTCTAG+TGG | - | chr3.1:76033181-76033200 | None:intergenic | 50.0% | |
| TCCGCATTACCACTCAAGGA+AGG | + | chr3.1:76031377-76031396 | MS.gene049340:CDS | 50.0% | |
| TCTTCAGTCGTTGTGGGACT+TGG | + | chr3.1:76032718-76032737 | MS.gene049340:intron | 50.0% | |
| ! | GAAAAGCATGACCCCATGCA+CGG | - | chr3.1:76034770-76034789 | None:intergenic | 50.0% |
| ! | GGGGGTATGGAATATGGTGA+TGG | + | chr3.1:76034705-76034724 | MS.gene049340:CDS | 50.0% |
| !! | TATGGTGATGGTTGGGATGG+TGG | + | chr3.1:76034717-76034736 | MS.gene049340:CDS | 50.0% |
| AAGGATGCGAGGAAGGGGAA+GGG | + | chr3.1:76034495-76034514 | MS.gene049340:CDS | 55.0% | |
| ACAAAGAGACGGGTGAGGTG+GGG | - | chr3.1:76033843-76033862 | None:intergenic | 55.0% | |
| AGTCATACTGCCCAACTGGC+TGG | - | chr3.1:76034818-76034837 | None:intergenic | 55.0% | |
| CTCACCAAGGATGCGAGGAA+GGG | + | chr3.1:76034489-76034508 | MS.gene049340:CDS | 55.0% | |
| GAGCTGGATACATCCTCCAC+AGG | + | chr3.1:76033344-76033363 | MS.gene049340:CDS | 55.0% | |
| GGCCAAGTGTTCTTACCACG+AGG | - | chr3.1:76034867-76034886 | None:intergenic | 55.0% | |
| GGTGAGGTGGGGGATAGATA+AGG | - | chr3.1:76033832-76033851 | None:intergenic | 55.0% | |
| GTCATACTGCCCAACTGGCT+GGG | - | chr3.1:76034817-76034836 | None:intergenic | 55.0% | |
| GTGTTCTTACCACGAGGTGC+AGG | - | chr3.1:76034861-76034880 | None:intergenic | 55.0% | |
| TACATGCATGGGGGTCGTGT+TGG | + | chr3.1:76031536-76031555 | MS.gene049340:intron | 55.0% | |
| TCACCAAGGATGCGAGGAAG+GGG | + | chr3.1:76034490-76034509 | MS.gene049340:CDS | 55.0% | |
| TTCTTACCACGAGGTGCAGG+TGG | - | chr3.1:76034858-76034877 | None:intergenic | 55.0% | |
| ! | ATGCTTTTCGTGGACGGGGA+CGG | + | chr3.1:76034781-76034800 | MS.gene049340:CDS | 55.0% |
| ! | CTTTGGGTTTCTCCACCCTC+TGG | - | chr3.1:76031330-76031349 | None:intergenic | 55.0% |
| ! | GCATGGGGTCATGCTTTTCG+TGG | + | chr3.1:76034771-76034790 | MS.gene049340:CDS | 55.0% |
| ! | GGGGTCATGCTTTTCGTGGA+CGG | + | chr3.1:76034775-76034794 | MS.gene049340:CDS | 55.0% |
| ! | GGGTCATGCTTTTCGTGGAC+GGG | + | chr3.1:76034776-76034795 | MS.gene049340:CDS | 55.0% |
| ! | GGTCATGCTTTTCGTGGACG+GGG | + | chr3.1:76034777-76034796 | MS.gene049340:CDS | 55.0% |
| AAGGGGAAGGGGTCGTGGAA+GGG | + | chr3.1:76034507-76034526 | MS.gene049340:CDS | 60.0% | |
| AGGATGCGAGGAAGGGGAAG+GGG | + | chr3.1:76034496-76034515 | MS.gene049340:CDS | 60.0% | |
| CAAAGAGACGGGTGAGGTGG+GGG | - | chr3.1:76033842-76033861 | None:intergenic | 60.0% | |
| CAAGGATGCGAGGAAGGGGA+AGG | + | chr3.1:76034494-76034513 | MS.gene049340:CDS | 60.0% | |
| CTTCCCCTTCCTCGCATCCT+TGG | - | chr3.1:76034496-76034515 | None:intergenic | 60.0% | |
| GAAGGCTCACCAAGGATGCG+AGG | + | chr3.1:76034484-76034503 | MS.gene049340:intron | 60.0% | |
| GACGTGGCTATGGTGGCAGA+GGG | + | chr3.1:76034739-76034758 | MS.gene049340:CDS | 60.0% | |
| GCTATGGTGCCCAGCCAGTT+GGG | + | chr3.1:76034805-76034824 | MS.gene049340:CDS | 60.0% | |
| GCTCACCAAGGATGCGAGGA+AGG | + | chr3.1:76034488-76034507 | MS.gene049340:CDS | 60.0% | |
| ! | TGCTTTTCGTGGACGGGGAC+GGG | + | chr3.1:76034782-76034801 | MS.gene049340:CDS | 60.0% |
| !! | GATGGTGGACGTGGCTATGG+TGG | + | chr3.1:76034732-76034751 | MS.gene049340:CDS | 60.0% |
| !! | GATGGTTGGGATGGTGGACG+TGG | + | chr3.1:76034723-76034742 | MS.gene049340:CDS | 60.0% |
| !! | TGGGATGGTGGACGTGGCTA+TGG | + | chr3.1:76034729-76034748 | MS.gene049340:CDS | 60.0% |
| AAGGGGTCGTGGAAGGGGCA+GGG | + | chr3.1:76034513-76034532 | MS.gene049340:CDS | 65.0% | |
| AGGGGAAGGGGTCGTGGAAG+GGG | + | chr3.1:76034508-76034527 | MS.gene049340:CDS | 65.0% | |
| AGGGGCAGGGGTAGAGGTAG+AGG | + | chr3.1:76034526-76034545 | MS.gene049340:CDS | 65.0% | |
| GAAGGGGAAGGGGTCGTGGA+AGG | + | chr3.1:76034506-76034525 | MS.gene049340:CDS | 65.0% | |
| GATGCACCACCTGCACCTCG+TGG | + | chr3.1:76034849-76034868 | MS.gene049340:CDS | 65.0% | |
| GGACGTGGCTATGGTGGCAG+AGG | + | chr3.1:76034738-76034757 | MS.gene049340:CDS | 65.0% | |
| GGCTATGGTGCCCAGCCAGT+TGG | + | chr3.1:76034804-76034823 | MS.gene049340:CDS | 65.0% | |
| ! | GCTTTTCGTGGACGGGGACG+GGG | + | chr3.1:76034783-76034802 | MS.gene049340:CDS | 65.0% |
| AGGGGTCGTGGAAGGGGCAG+GGG | + | chr3.1:76034514-76034533 | MS.gene049340:CDS | 70.0% | |
| CGAGGAAGGGGAAGGGGTCG+TGG | + | chr3.1:76034502-76034521 | MS.gene049340:CDS | 70.0% | |
| CGTGGAAGGGGCAGGGGTAG+AGG | + | chr3.1:76034520-76034539 | MS.gene049340:CDS | 70.0% | |
| GAAGGGGTCGTGGAAGGGGC+AGG | + | chr3.1:76034512-76034531 | MS.gene049340:CDS | 70.0% | |
| ! | AGAGGGCGCGTCCGTGCATG+GGG | + | chr3.1:76034756-76034775 | MS.gene049340:CDS | 70.0% |
| ! | CAGAGGGCGCGTCCGTGCAT+GGG | + | chr3.1:76034755-76034774 | MS.gene049340:CDS | 70.0% |
| CGTGGACGGGGACGGGGCTA+TGG | + | chr3.1:76034789-76034808 | MS.gene049340:CDS | 75.0% | |
| ! | GCAGAGGGCGCGTCCGTGCA+TGG | + | chr3.1:76034754-76034773 | MS.gene049340:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 76031316 | 76034911 | 76031316 | ID=MS.gene049340 |
| chr3.1 | mRNA | 76031316 | 76034911 | 76031316 | ID=MS.gene049340.t1;Parent=MS.gene049340 |
| chr3.1 | exon | 76031316 | 76031438 | 76031316 | ID=MS.gene049340.t1.exon1;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76031316 | 76031438 | 76031316 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76032946 | 76033026 | 76032946 | ID=MS.gene049340.t1.exon2;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76032946 | 76033026 | 76032946 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76033112 | 76033200 | 76033112 | ID=MS.gene049340.t1.exon3;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76033112 | 76033200 | 76033112 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76033292 | 76033366 | 76033292 | ID=MS.gene049340.t1.exon4;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76033292 | 76033366 | 76033292 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76034332 | 76034393 | 76034332 | ID=MS.gene049340.t1.exon5;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76034332 | 76034393 | 76034332 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76034485 | 76034547 | 76034485 | ID=MS.gene049340.t1.exon6;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76034485 | 76034547 | 76034485 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| chr3.1 | exon | 76034694 | 76034911 | 76034694 | ID=MS.gene049340.t1.exon7;Parent=MS.gene049340.t1 |
| chr3.1 | CDS | 76034694 | 76034911 | 76034694 | ID=cds.MS.gene049340.t1;Parent=MS.gene049340.t1 |
| Gene Sequence |
| Protein sequence |
