Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053597.t1 | XP_003608370.3 | 93.8 | 243 | 8 | 1 | 1 | 236 | 32 | 274 | 3.60E-114 | 421 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053597.t1 | Q9LM24 | 53.7 | 82 | 38 | 0 | 95 | 176 | 189 | 270 | 5.6e-15 | 82.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053597.t1 | B0F6T0 | 93.8 | 242 | 8 | 1 | 1 | 235 | 197 | 438 | 7.6e-114 | 419.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene053597 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene053597 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene053597 | 0.811475 | 6.87E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene053599 | 0.956781 | 1.31E-114 | -1.69E-46 |
| MS.gene053597 | MS.gene053678 | 0.808453 | 3.07E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene055465 | 0.815777 | 7.77E-52 | -1.69E-46 |
| MS.gene053597 | MS.gene055466 | 0.804235 | 2.38E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene055891 | 0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene059015 | 0.804906 | 1.73E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene062713 | 0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene053597 | MS.gene062743 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene063452 | 0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene065667 | 0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene067071 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene06723 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene068004 | 0.904735 | 9.00E-80 | -1.69E-46 |
| MS.gene053597 | MS.gene068006 | 0.920297 | 1.53E-87 | -1.69E-46 |
| MS.gene053597 | MS.gene068008 | 0.957013 | 7.53E-115 | -1.69E-46 |
| MS.gene053597 | MS.gene06940 | 0.811385 | 7.19E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene070667 | 0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene074034 | 0.821253 | 4.46E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene074258 | 0.838269 | 3.18E-57 | -1.69E-46 |
| MS.gene053597 | MS.gene074259 | 0.805794 | 1.12E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene08554 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene20061 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene22436 | 0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene24268 | 0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene24312 | 0.835346 | 1.77E-56 | -1.69E-46 |
| MS.gene053597 | MS.gene24330 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene25435 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene25436 | 0.809597 | 1.75E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene26916 | 0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene26972 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene27342 | 0.810756 | 9.84E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene29576 | 0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene29807 | 0.816017 | 6.87E-52 | -1.69E-46 |
| MS.gene053597 | MS.gene34232 | 0.823882 | 1.09E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene34718 | 0.80245 | 5.58E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene35575 | 0.810465 | 1.14E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene36496 | 0.809908 | 1.50E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene38844 | 0.82012 | 8.11E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene42162 | 0.822739 | 2.02E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene45609 | 0.802144 | 6.45E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene48701 | 0.821972 | 3.04E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene51511 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene053597 | MS.gene52594 | 0.802542 | 5.34E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene52946 | 0.824547 | 7.61E-54 | -1.69E-46 |
| MS.gene053597 | MS.gene54197 | 0.803019 | 4.26E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene54967 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene55956 | 0.805099 | 1.57E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene56067 | 0.803018 | 4.26E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene56414 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene56462 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene053597 | MS.gene59241 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene053597 | MS.gene59242 | 0.809558 | 1.78E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene60174 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene61133 | 0.801122 | 1.05E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene63327 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene67486 | 0.808584 | 2.88E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene67746 | 0.831127 | 1.99E-55 | -1.69E-46 |
| MS.gene053597 | MS.gene69459 | 0.807942 | 3.95E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene73016 | 0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene76034 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene76314 | 0.803024 | 4.25E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene78354 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene053597 | MS.gene80231 | 0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene80257 | 0.838958 | 2.11E-57 | -1.69E-46 |
| MS.gene053597 | MS.gene83940 | 0.824365 | 8.39E-54 | -1.69E-46 |
| MS.gene053597 | MS.gene83996 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene84426 | 0.806018 | 1.01E-49 | -1.69E-46 |
| MS.gene053597 | MS.gene85225 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene053597 | MS.gene90239 | 0.852586 | 4.19E-61 | -1.69E-46 |
| MS.gene053597 | MS.gene91914 | 0.832911 | 7.21E-56 | -1.69E-46 |
| MS.gene053597 | MS.gene96083 | 0.817869 | 2.64E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053597.t1 | MTR_4g093150 | 92.958 | 213 | 8 | 1 | 31 | 236 | 1 | 213 | 8.40e-140 | 390 |
| MS.gene053597.t1 | MTR_2g009770 | 52.903 | 155 | 72 | 1 | 61 | 214 | 98 | 252 | 4.65e-36 | 129 |
| MS.gene053597.t1 | MTR_1g054835 | 36.585 | 123 | 76 | 1 | 78 | 198 | 42 | 164 | 3.65e-13 | 68.6 |
| MS.gene053597.t1 | MTR_1g070350 | 34.167 | 120 | 77 | 1 | 73 | 192 | 509 | 626 | 2.13e-12 | 66.6 |
| MS.gene053597.t1 | MTR_5g078300 | 38.750 | 80 | 49 | 0 | 91 | 170 | 612 | 691 | 1.22e-11 | 64.3 |
| MS.gene053597.t1 | MTR_4g107310 | 31.250 | 208 | 122 | 7 | 43 | 234 | 262 | 464 | 3.38e-11 | 62.8 |
| MS.gene053597.t1 | MTR_0168s0060 | 33.333 | 132 | 85 | 1 | 75 | 203 | 307 | 438 | 6.06e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053597.t1 | AT5G16720 | 37.000 | 100 | 63 | 0 | 99 | 198 | 360 | 459 | 3.72e-15 | 74.7 |
| MS.gene053597.t1 | AT1G70750 | 34.783 | 115 | 72 | 1 | 96 | 207 | 410 | 524 | 2.91e-14 | 72.0 |
| MS.gene053597.t1 | AT1G74830 | 37.500 | 96 | 60 | 0 | 99 | 194 | 305 | 400 | 3.37e-14 | 71.6 |
| MS.gene053597.t1 | AT1G18265 | 52.273 | 88 | 42 | 0 | 89 | 176 | 183 | 270 | 4.87e-14 | 70.1 |
| MS.gene053597.t1 | AT5G06560 | 35.000 | 100 | 65 | 0 | 99 | 198 | 74 | 173 | 2.48e-12 | 66.2 |
Find 53 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCCCATCTTTGGAAAA+TGG | 0.168151 | 4.4:-21536227 | MS.gene053597:CDS |
| TGAGTCGAAGAATTGGTATT+AGG | 0.240330 | 4.4:+21536197 | None:intergenic |
| TCCCACAATTCGTTTATGTT+TGG | 0.317458 | 4.4:-21536279 | MS.gene053597:CDS |
| GAAGAACTCAAGCAATATCT+TGG | 0.374861 | 4.4:-21535795 | MS.gene053597:CDS |
| GAGTCGAAGAATTGGTATTA+GGG | 0.386407 | 4.4:+21536198 | None:intergenic |
| TGATGAAGTGATCGAGTCTT+TGG | 0.389665 | 4.4:-21535883 | MS.gene053597:CDS |
| AAATCCCATCTTTGGAAAAT+GGG | 0.392542 | 4.4:-21536226 | MS.gene053597:CDS |
| GAAAGCTAATGCGGCGTTTG+CGG | 0.398717 | 4.4:-21536048 | MS.gene053597:CDS |
| AAGAACTCAAGCAATATCTT+GGG | 0.416257 | 4.4:-21535794 | MS.gene053597:CDS |
| TCTCTTCTGAGTCGAAGAAT+TGG | 0.418771 | 4.4:+21536190 | None:intergenic |
| GAAGAGATTGAATGGTCGTT+TGG | 0.421960 | 4.4:-21536174 | MS.gene053597:CDS |
| ATGTTTGGAAAACTTTGTTT+TGG | 0.423857 | 4.4:-21536264 | MS.gene053597:CDS |
| GTGTGTTGGAAGAGCAGTTG+AGG | 0.428235 | 4.4:-21535827 | MS.gene053597:CDS |
| TTCCAAACATAAACGAATTG+TGG | 0.432068 | 4.4:+21536277 | None:intergenic |
| TCCAAACATAAACGAATTGT+GGG | 0.444313 | 4.4:+21536278 | None:intergenic |
| AAGCAATATCTTGGGGAGGA+TGG | 0.455312 | 4.4:-21535786 | MS.gene053597:CDS |
| AGGCAATGGCGATGATTCTC+AGG | 0.455510 | 4.4:-21535983 | MS.gene053597:CDS |
| TGAATGGTCGTTTGGAAGAT+CGG | 0.461435 | 4.4:-21536166 | MS.gene053597:CDS |
| GGCTTCTTCATCTGCGGAAG+AGG | 0.462933 | 4.4:-21536003 | MS.gene053597:CDS |
| GTAGTTAGCTCTTCTGAAAA+CGG | 0.463530 | 4.4:-21535699 | MS.gene053597:CDS |
| GGCGTTTGCGGAGCTTGATA+AGG | 0.464641 | 4.4:-21536036 | MS.gene053597:CDS |
| TCAAGATTCTTCACTTCGGT+TGG | 0.466081 | 4.4:-21536346 | MS.gene053597:CDS |
| TCTCGAGGCATGAATCTCAT+AGG | 0.486643 | 4.4:-21535851 | MS.gene053597:CDS |
| TGTGTTGGAAGAGCAGTTGA+GGG | 0.487289 | 4.4:-21535826 | MS.gene053597:CDS |
| AGCAATATCTTGGGGAGGAT+GGG | 0.488013 | 4.4:-21535785 | MS.gene053597:CDS |
| AAGCTGATGTTAGTAGAGAT+AGG | 0.499821 | 4.4:-21535749 | MS.gene053597:CDS |
| GAAAGATGATAGTGAAATGC+AGG | 0.502055 | 4.4:-21536135 | MS.gene053597:CDS |
| TCGACTCAGAAGAGATTGAA+TGG | 0.516087 | 4.4:-21536182 | MS.gene053597:CDS |
| TTCATCTGCGGAAGAGGCAA+TGG | 0.519311 | 4.4:-21535997 | MS.gene053597:CDS |
| TACTAACATCAGCTTCAAGT+TGG | 0.521972 | 4.4:+21535757 | None:intergenic |
| CACAACCTTGGAAACTTACA+AGG | 0.522214 | 4.4:+21535668 | None:intergenic |
| AGCGAATCAATTCCGCAGAA+TGG | 0.525489 | 4.4:-21535928 | MS.gene053597:CDS |
| TGGTCGTTTGGAAGATCGGT+TGG | 0.527702 | 4.4:-21536162 | MS.gene053597:CDS |
| TCAAACACCTCATCCACATC+AGG | 0.540118 | 4.4:+21536110 | None:intergenic |
| TGTTTCAAGATTCTTCACTT+CGG | 0.555363 | 4.4:-21536350 | MS.gene053597:CDS |
| AAGTGATCGAGTCTTTGGAA+TGG | 0.572333 | 4.4:-21535878 | MS.gene053597:CDS |
| TGAATCTCATAGGAGTGTGT+TGG | 0.573968 | 4.4:-21535841 | MS.gene053597:CDS |
| GTTTGGAAGATCGGTTGGAA+AGG | 0.591359 | 4.4:-21536157 | MS.gene053597:CDS |
| TTGCGGAGCTTGATAAGGAA+CGG | 0.610513 | 4.4:-21536031 | MS.gene053597:CDS |
| GCAGGTTCCTGATGTGGATG+AGG | 0.610761 | 4.4:-21536117 | MS.gene053597:CDS |
| CTTTGGAATGGACGATCTCG+AGG | 0.612708 | 4.4:-21535866 | MS.gene053597:CDS |
| AGTTGATAAAGATTGAGCGC+AGG | 0.614343 | 4.4:-21536070 | MS.gene053597:CDS |
| ACCTTGGAAACTTACAAGGT+CGG | 0.615530 | 4.4:+21535672 | None:intergenic |
| ACTTCTGTTCAGCCATTCTG+CGG | 0.620830 | 4.4:+21535916 | None:intergenic |
| TGAAATGCAGGTTCCTGATG+TGG | 0.621860 | 4.4:-21536123 | MS.gene053597:CDS |
| AAAATCACAGAGAAAACGTA+GGG | 0.635297 | 4.4:+21536310 | None:intergenic |
| GCTTCAGAGTGAGAAGAGCT+CGG | 0.636966 | 4.4:-21535961 | MS.gene053597:CDS |
| GCTTGATAAGGAACGGACAG+CGG | 0.649607 | 4.4:-21536024 | MS.gene053597:CDS |
| TGAGCGCAGGAAAGCTAATG+CGG | 0.653423 | 4.4:-21536057 | MS.gene053597:CDS |
| AGAACTCAAGCAATATCTTG+GGG | 0.655002 | 4.4:-21535793 | MS.gene053597:CDS |
| ACTCAAGCAATATCTTGGGG+AGG | 0.657753 | 4.4:-21535790 | MS.gene053597:CDS |
| GACAGCGGCTTCTTCATCTG+CGG | 0.673445 | 4.4:-21536009 | MS.gene053597:CDS |
| CAAAATCACAGAGAAAACGT+AGG | 0.688372 | 4.4:+21536309 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAGAAAAAAATCCCATCTT+TGG | - | chr4.4:21535820-21535839 | MS.gene053597:CDS | 25.0% |
| !!! | ATGTTTGGAAAACTTTGTTT+TGG | - | chr4.4:21535790-21535809 | MS.gene053597:CDS | 25.0% |
| AAAATCACAGAGAAAACGTA+GGG | + | chr4.4:21535747-21535766 | None:intergenic | 30.0% | |
| AAGAACTCAAGCAATATCTT+GGG | - | chr4.4:21536260-21536279 | MS.gene053597:CDS | 30.0% | |
| TCCAAACATAAACGAATTGT+GGG | + | chr4.4:21535779-21535798 | None:intergenic | 30.0% | |
| TGTTTCAAGATTCTTCACTT+CGG | - | chr4.4:21535704-21535723 | MS.gene053597:CDS | 30.0% | |
| TTCCAAACATAAACGAATTG+TGG | + | chr4.4:21535780-21535799 | None:intergenic | 30.0% | |
| ! | AAAATCCCATCTTTGGAAAA+TGG | - | chr4.4:21535827-21535846 | MS.gene053597:CDS | 30.0% |
| ! | AAATCCCATCTTTGGAAAAT+GGG | - | chr4.4:21535828-21535847 | MS.gene053597:CDS | 30.0% |
| AAGCTGATGTTAGTAGAGAT+AGG | - | chr4.4:21536305-21536324 | MS.gene053597:CDS | 35.0% | |
| AGAACTCAAGCAATATCTTG+GGG | - | chr4.4:21536261-21536280 | MS.gene053597:CDS | 35.0% | |
| CAAAATCACAGAGAAAACGT+AGG | + | chr4.4:21535748-21535767 | None:intergenic | 35.0% | |
| GAAGAACTCAAGCAATATCT+TGG | - | chr4.4:21536259-21536278 | MS.gene053597:CDS | 35.0% | |
| GAGTCGAAGAATTGGTATTA+GGG | + | chr4.4:21535859-21535878 | None:intergenic | 35.0% | |
| TACTAACATCAGCTTCAAGT+TGG | + | chr4.4:21536300-21536319 | None:intergenic | 35.0% | |
| TCCCACAATTCGTTTATGTT+TGG | - | chr4.4:21535775-21535794 | MS.gene053597:CDS | 35.0% | |
| TGAGTCGAAGAATTGGTATT+AGG | + | chr4.4:21535860-21535879 | None:intergenic | 35.0% | |
| ! | CTACGTTTTCTCTGTGATTT+TGG | - | chr4.4:21535746-21535765 | MS.gene053597:CDS | 35.0% |
| ! | GAAAGATGATAGTGAAATGC+AGG | - | chr4.4:21535919-21535938 | MS.gene053597:CDS | 35.0% |
| ! | GTAGTTAGCTCTTCTGAAAA+CGG | - | chr4.4:21536355-21536374 | MS.gene053597:CDS | 35.0% |
| GAAGAGATTGAATGGTCGTT+TGG | - | chr4.4:21535880-21535899 | MS.gene053597:CDS | 40.0% | |
| TCAAGATTCTTCACTTCGGT+TGG | - | chr4.4:21535708-21535727 | MS.gene053597:CDS | 40.0% | |
| TCGACTCAGAAGAGATTGAA+TGG | - | chr4.4:21535872-21535891 | MS.gene053597:CDS | 40.0% | |
| TCTCTTCTGAGTCGAAGAAT+TGG | + | chr4.4:21535867-21535886 | None:intergenic | 40.0% | |
| TGAATGGTCGTTTGGAAGAT+CGG | - | chr4.4:21535888-21535907 | MS.gene053597:CDS | 40.0% | |
| TGATGAAGTGATCGAGTCTT+TGG | - | chr4.4:21536171-21536190 | MS.gene053597:CDS | 40.0% | |
| ! | AAGTGATCGAGTCTTTGGAA+TGG | - | chr4.4:21536176-21536195 | MS.gene053597:CDS | 40.0% |
| ! | CACTTCGGTTGGCATTTTAA+GGG | - | chr4.4:21535719-21535738 | MS.gene053597:CDS | 40.0% |
| ! | GAGACCCATTTTCCAAAGAT+GGG | + | chr4.4:21535835-21535854 | None:intergenic | 40.0% |
| ! | TCACTTCGGTTGGCATTTTA+AGG | - | chr4.4:21535718-21535737 | MS.gene053597:CDS | 40.0% |
| ! | TGAATCTCATAGGAGTGTGT+TGG | - | chr4.4:21536213-21536232 | MS.gene053597:CDS | 40.0% |
| ! | TGAGACCCATTTTCCAAAGA+TGG | + | chr4.4:21535836-21535855 | None:intergenic | 40.0% |
| !! | AGTTGATAAAGATTGAGCGC+AGG | - | chr4.4:21535984-21536003 | MS.gene053597:CDS | 40.0% |
| AAGCAATATCTTGGGGAGGA+TGG | - | chr4.4:21536268-21536287 | MS.gene053597:CDS | 45.0% | |
| ACTCAAGCAATATCTTGGGG+AGG | - | chr4.4:21536264-21536283 | MS.gene053597:CDS | 45.0% | |
| ACTTCTGTTCAGCCATTCTG+CGG | + | chr4.4:21536141-21536160 | None:intergenic | 45.0% | |
| AGCAATATCTTGGGGAGGAT+GGG | - | chr4.4:21536269-21536288 | MS.gene053597:CDS | 45.0% | |
| AGCGAATCAATTCCGCAGAA+TGG | - | chr4.4:21536126-21536145 | MS.gene053597:CDS | 45.0% | |
| GTTTGGAAGATCGGTTGGAA+AGG | - | chr4.4:21535897-21535916 | MS.gene053597:CDS | 45.0% | |
| TCAAACACCTCATCCACATC+AGG | + | chr4.4:21535947-21535966 | None:intergenic | 45.0% | |
| TCTCGAGGCATGAATCTCAT+AGG | - | chr4.4:21536203-21536222 | MS.gene053597:CDS | 45.0% | |
| TGAAATGCAGGTTCCTGATG+TGG | - | chr4.4:21535931-21535950 | MS.gene053597:CDS | 45.0% | |
| TGTGTTGGAAGAGCAGTTGA+GGG | - | chr4.4:21536228-21536247 | MS.gene053597:CDS | 45.0% | |
| TTGCGGAGCTTGATAAGGAA+CGG | - | chr4.4:21536023-21536042 | MS.gene053597:CDS | 45.0% | |
| AGGCAATGGCGATGATTCTC+AGG | - | chr4.4:21536071-21536090 | MS.gene053597:CDS | 50.0% | |
| GAAAGCTAATGCGGCGTTTG+CGG | - | chr4.4:21536006-21536025 | MS.gene053597:CDS | 50.0% | |
| GCTTCAGAGTGAGAAGAGCT+CGG | - | chr4.4:21536093-21536112 | MS.gene053597:CDS | 50.0% | |
| GCTTGATAAGGAACGGACAG+CGG | - | chr4.4:21536030-21536049 | MS.gene053597:CDS | 50.0% | |
| GTGTGTTGGAAGAGCAGTTG+AGG | - | chr4.4:21536227-21536246 | MS.gene053597:CDS | 50.0% | |
| TGAGCGCAGGAAAGCTAATG+CGG | - | chr4.4:21535997-21536016 | MS.gene053597:CDS | 50.0% | |
| TGGTCGTTTGGAAGATCGGT+TGG | - | chr4.4:21535892-21535911 | MS.gene053597:CDS | 50.0% | |
| TTCATCTGCGGAAGAGGCAA+TGG | - | chr4.4:21536057-21536076 | MS.gene053597:CDS | 50.0% | |
| !! | CTTTGGAATGGACGATCTCG+AGG | - | chr4.4:21536188-21536207 | MS.gene053597:CDS | 50.0% |
| GACAGCGGCTTCTTCATCTG+CGG | - | chr4.4:21536045-21536064 | MS.gene053597:CDS | 55.0% | |
| GCAGGTTCCTGATGTGGATG+AGG | - | chr4.4:21535937-21535956 | MS.gene053597:CDS | 55.0% | |
| GGCGTTTGCGGAGCTTGATA+AGG | - | chr4.4:21536018-21536037 | MS.gene053597:CDS | 55.0% | |
| GGCTTCTTCATCTGCGGAAG+AGG | - | chr4.4:21536051-21536070 | MS.gene053597:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 21535683 | 21536393 | 21535683 | ID=MS.gene053597 |
| chr4.4 | mRNA | 21535683 | 21536393 | 21535683 | ID=MS.gene053597.t1;Parent=MS.gene053597 |
| chr4.4 | exon | 21535683 | 21536393 | 21535683 | ID=MS.gene053597.t1.exon1;Parent=MS.gene053597.t1 |
| chr4.4 | CDS | 21535683 | 21536393 | 21535683 | ID=cds.MS.gene053597.t1;Parent=MS.gene053597.t1 |
| Gene Sequence |
| Protein sequence |
