Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34846.t1 | XP_013442451.1 | 97.5 | 322 | 8 | 0 | 10 | 331 | 83 | 404 | 3.00E-175 | 624.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34846.t1 | Q9LF50 | 71.0 | 317 | 92 | 0 | 12 | 328 | 98 | 414 | 1.5e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34846.t1 | A0A072TH01 | 97.5 | 322 | 8 | 0 | 10 | 331 | 83 | 404 | 2.2e-175 | 624.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049609 | MS.gene34846 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene34846 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene34846 | 0.82062 | 6.23E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene34846 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene34846 | 0.805841 | 1.10E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene34846 | 0.822385 | 2.44E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene34846 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene34846 | 0.803752 | 3.00E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene34846 | 0.805291 | 1.43E-49 | -1.69E-46 |
| MS.gene052670 | MS.gene34846 | 0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene34846 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene34846 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene34846 | 0.860171 | 2.49E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene34846 | 0.842009 | 3.36E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene34846 | 0.826988 | 2.00E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene34846 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene34846 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene34846 | 0.822265 | 2.60E-53 | -1.69E-46 |
| MS.gene056877 | MS.gene34846 | 0.813474 | 2.51E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene34846 | 0.818122 | 2.31E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene34846 | 0.856831 | 2.47E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene34846 | 0.810028 | 1.41E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene34846 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene060356 | MS.gene34846 | 0.806128 | 9.56E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene34846 | 0.810178 | 1.31E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34846.t1 | MTR_0172s0020 | 97.516 | 322 | 8 | 0 | 10 | 331 | 83 | 404 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34846.t1 | AT5G17520 | 70.978 | 317 | 92 | 0 | 12 | 328 | 98 | 414 | 9.20e-165 | 466 |
| MS.gene34846.t1 | AT5G17520 | 70.978 | 317 | 92 | 0 | 12 | 328 | 36 | 352 | 1.28e-164 | 463 |
| MS.gene34846.t1 | AT5G17523 | 65.926 | 135 | 46 | 0 | 12 | 146 | 98 | 232 | 6.80e-50 | 167 |
Find 71 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCGACAGGAATGGCTTTC+TGG | 0.160629 | 4.4:-60851643 | MS.gene34846:intron |
| ATTTCCAGCAATGAGATTTC+TGG | 0.176884 | 4.4:+60855308 | None:intergenic |
| ATGCTGGAATCTGGCGCTTT+TGG | 0.199585 | 4.4:-60853833 | MS.gene34846:CDS |
| TTGTGTTCACTTACAGAAAT+AGG | 0.247904 | 4.4:+60852185 | None:intergenic |
| AAATTTGTTGGTGGAATATC+TGG | 0.287335 | 4.4:-60853069 | MS.gene34846:CDS |
| TGGGAAGATTTCATTACAAT+TGG | 0.310319 | 4.4:-60853813 | MS.gene34846:CDS |
| CAAGATGCTGTTAGGTAGAT+AGG | 0.317684 | 4.4:+60853649 | None:intergenic |
| GCTACCATATTCTATGGATA+TGG | 0.332128 | 4.4:-60852220 | MS.gene34846:CDS |
| GCTTACTAAATGCTGGAATC+TGG | 0.333611 | 4.4:-60853842 | MS.gene34846:CDS |
| TATCAACAAGGAATTCTTCT+TGG | 0.335994 | 4.4:-60852067 | MS.gene34846:CDS |
| TCGTGGGCTACCATATTCTA+TGG | 0.338875 | 4.4:-60852226 | MS.gene34846:CDS |
| GGGAAGATTTCATTACAATT+GGG | 0.361219 | 4.4:-60853812 | MS.gene34846:CDS |
| CTTGGCAGCAACTGTCGGTT+TGG | 0.363762 | 4.4:-60852049 | MS.gene34846:CDS |
| TCTGTGGCATTTGCAGTAAC+AGG | 0.364710 | 4.4:+60855343 | None:intergenic |
| CTGAATTTCATGAATTACTT+TGG | 0.367581 | 4.4:-60853864 | MS.gene34846:CDS |
| ATTCCCATATCCATAGAATA+TGG | 0.373480 | 4.4:+60852216 | None:intergenic |
| GACAATCCTTTCATGTTCTC+AGG | 0.378946 | 4.4:+60852877 | None:intergenic |
| GCATGGTTACAGTTCACCTT+TGG | 0.396273 | 4.4:-60851606 | MS.gene34846:CDS |
| ATTTACTTACAGGCAAGAAC+TGG | 0.402272 | 4.4:-60853114 | MS.gene34846:intron |
| TTGCTTGCAATGCTTGGAAA+TGG | 0.408232 | 4.4:-60852841 | MS.gene34846:CDS |
| AATGCCAGAAATCTCATTGC+TGG | 0.409511 | 4.4:-60855312 | MS.gene34846:CDS |
| TACTTTGGCTTACTAAATGC+TGG | 0.410058 | 4.4:-60853849 | MS.gene34846:CDS |
| TCACTTACATCTAAATTCTC+TGG | 0.411129 | 4.4:-60855384 | MS.gene34846:CDS |
| CAACTGTCGGTTTGGTCTCA+TGG | 0.412077 | 4.4:-60852041 | MS.gene34846:CDS |
| ACGTTTACCATCTGAGAAAC+AGG | 0.420030 | 4.4:+60853015 | None:intergenic |
| GAGAAAGGTGTTAAATTTGT+TGG | 0.432102 | 4.4:-60853081 | MS.gene34846:CDS |
| GCACCAGGCAAGATGCTGTT+AGG | 0.438842 | 4.4:+60853641 | None:intergenic |
| AACTATGATTGTAGGTTCAC+TGG | 0.442842 | 4.4:-60852253 | MS.gene34846:intron |
| ATATGTTGTCATTGTTCAGT+TGG | 0.460317 | 4.4:-60853955 | MS.gene34846:CDS |
| CTCAATCCTGAGAACATGAA+AGG | 0.461004 | 4.4:-60852883 | MS.gene34846:CDS |
| TCTATGTTGCTTGCAATGCT+TGG | 0.464120 | 4.4:-60852847 | MS.gene34846:CDS |
| CTACCATATTCTATGGATAT+GGG | 0.466317 | 4.4:-60852219 | MS.gene34846:CDS |
| CATTGTTCAGTTGGCATTAG+CGG | 0.471343 | 4.4:-60853946 | MS.gene34846:CDS |
| CAGATATGACTATGAGCAAT+GGG | 0.471686 | 4.4:-60855409 | MS.gene34846:CDS |
| GGAATGCTTACTAGTTTGCT+TGG | 0.475196 | 4.4:-60854059 | MS.gene34846:CDS |
| TTCTTCTTGGCAGCAACTGT+CGG | 0.491989 | 4.4:-60852054 | MS.gene34846:CDS |
| ACTTCAGTGGTTGTAGTGTC+AGG | 0.495916 | 4.4:-60853894 | MS.gene34846:CDS |
| AAGATGCTGTTAGGTAGATA+GGG | 0.497941 | 4.4:+60853650 | None:intergenic |
| GACAGCTATGACAAAGGAAA+TGG | 0.500671 | 4.4:+60853619 | None:intergenic |
| ACTGGAAAACTTTCTGAGAA+AGG | 0.503327 | 4.4:-60853096 | MS.gene34846:CDS |
| CTACCTAACAGCATCTTGCC+TGG | 0.509297 | 4.4:-60853644 | MS.gene34846:CDS |
| CTTTGCCAAGAAGAGAGAAA+AGG | 0.511181 | 4.4:-60854015 | MS.gene34846:CDS |
| GAAGAGAGAAAAGGAAGCAA+TGG | 0.519086 | 4.4:-60854006 | MS.gene34846:CDS |
| GCATTTGCAGTAACAGGAAA+GGG | 0.520318 | 4.4:+60855349 | None:intergenic |
| GGAAGATTTCATTACAATTG+GGG | 0.526329 | 4.4:-60853811 | MS.gene34846:CDS |
| CAAAGTATGAAAGTAGTGAC+AGG | 0.529455 | 4.4:+60854033 | None:intergenic |
| AGCTGTCGTGGCTGTTACCA+TGG | 0.536823 | 4.4:-60853603 | MS.gene34846:intron |
| AAAGGTGTTAAATTTGTTGG+TGG | 0.539268 | 4.4:-60853078 | MS.gene34846:CDS |
| ATGACAAAGGAAATGGCACC+AGG | 0.553392 | 4.4:+60853626 | None:intergenic |
| AGCCACGACAGCTATGACAA+AGG | 0.558295 | 4.4:+60853613 | None:intergenic |
| GTCGGTTTGGTCTCATGGAT+AGG | 0.558576 | 4.4:-60852036 | MS.gene34846:intron |
| TAGGTTCACTGGTTCATCGT+GGG | 0.561359 | 4.4:-60852242 | MS.gene34846:CDS |
| TTCCTTTGTCATAGCTGTCG+TGG | 0.561699 | 4.4:-60853615 | MS.gene34846:CDS |
| CAGTTTAAACATTATCAACA+AGG | 0.561755 | 4.4:-60852079 | MS.gene34846:CDS |
| TCATTCTGATCCACCTCACC+AGG | 0.568525 | 4.4:-60855518 | MS.gene34846:intron |
| GCAGATATGACTATGAGCAA+TGG | 0.575223 | 4.4:-60855410 | MS.gene34846:intron |
| GGCATTTGCAGTAACAGGAA+AGG | 0.580392 | 4.4:+60855348 | None:intergenic |
| GCAATGGTAGTGCAGACACT+TGG | 0.582422 | 4.4:-60853990 | MS.gene34846:CDS |
| CAATCTGGATACAGATAATG+TGG | 0.583147 | 4.4:-60853685 | MS.gene34846:intron |
| CTGCTACGTTACTCTTCATG+TGG | 0.609119 | 4.4:-60853041 | MS.gene34846:CDS |
| GTGGATGCCTGTTTCTCAGA+TGG | 0.614756 | 4.4:-60853022 | MS.gene34846:intron |
| TAGGTACATACCTGGTGAGG+TGG | 0.615484 | 4.4:+60855508 | None:intergenic |
| TGGAGAGACAGTGTAGTGCA+TGG | 0.624152 | 4.4:-60851623 | MS.gene34846:CDS |
| GAAGATTTCATTACAATTGG+GGG | 0.629398 | 4.4:-60853810 | MS.gene34846:CDS |
| CTGGCATTAAGTAAAATCTG+TGG | 0.632705 | 4.4:+60855327 | None:intergenic |
| AGATGCTGTTAGGTAGATAG+GGG | 0.646554 | 4.4:+60853651 | None:intergenic |
| TTGTTGGTGGAATATCTGGA+TGG | 0.651433 | 4.4:-60853065 | MS.gene34846:CDS |
| GTAGGTTCACTGGTTCATCG+TGG | 0.663007 | 4.4:-60852243 | MS.gene34846:intron |
| TCTCGAATGAATAAAGCACG+TGG | 0.680027 | 4.4:+60852808 | None:intergenic |
| AAGTCACGTAGAGAAGCCAA+AGG | 0.721318 | 4.4:+60851590 | None:intergenic |
| GTGTAGGTACATACCTGGTG+AGG | 0.751219 | 4.4:+60855505 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAGTATGAAATTT+GGG | - | chr4.4:60852073-60852092 | MS.gene34846:CDS | 10.0% |
| !! | TTTATATACATTTATTAGTT+AGG | - | chr4.4:60852635-60852654 | MS.gene34846:intron | 10.0% |
| !!! | AAATTTCATACTTATTTTTT+GGG | + | chr4.4:60852073-60852092 | None:intergenic | 10.0% |
| !!! | GTATTTTATCTATAAAATAA+AGG | + | chr4.4:60855384-60855403 | None:intergenic | 10.0% |
| !!! | TAGATTAGTTTTTTTTTTTT+TGG | - | chr4.4:60854512-60854531 | MS.gene34846:intron | 10.0% |
| !!! | TATGTTTTTTTATTTTAACT+CGG | + | chr4.4:60852221-60852240 | None:intergenic | 10.0% |
| !! | AATAATCAAATATAACCTAA+AGG | + | chr4.4:60853530-60853549 | None:intergenic | 15.0% |
| !! | ATTATAACAATCACAATAAA+CGG | + | chr4.4:60852191-60852210 | None:intergenic | 15.0% |
| !! | CAAAAAATAAGTATGAAATT+TGG | - | chr4.4:60852072-60852091 | MS.gene34846:CDS | 15.0% |
| !! | GAGTTAAAATAAAAAAACAT+AGG | - | chr4.4:60852220-60852239 | MS.gene34846:CDS | 15.0% |
| !! | GGTTCAATTTAAAAAATTTA+TGG | - | chr4.4:60854647-60854666 | MS.gene34846:intron | 15.0% |
| !!! | AATTTCATACTTATTTTTTG+GGG | + | chr4.4:60852072-60852091 | None:intergenic | 15.0% |
| !!! | ATATTTTAATTTTGTTACTG+TGG | - | chr4.4:60851893-60851912 | MS.gene34846:intron | 15.0% |
| !!! | CAAATTTCATACTTATTTTT+TGG | + | chr4.4:60852074-60852093 | None:intergenic | 15.0% |
| !!! | TTTGAGATTTAATGAAAATT+TGG | + | chr4.4:60854364-60854383 | None:intergenic | 15.0% |
| !! | AAAAAAACTAATCTACAACA+AGG | + | chr4.4:60854507-60854526 | None:intergenic | 20.0% |
| !! | AATAACATATAACAATCTGA+AGG | + | chr4.4:60853714-60853733 | None:intergenic | 20.0% |
| !! | ATAAGAAAAAAAATGCATAG+GGG | + | chr4.4:60854157-60854176 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATACATAAAA+TGG | + | chr4.4:60852485-60852504 | None:intergenic | 20.0% |
| !! | CATAAGAAAAAAAATGCATA+GGG | + | chr4.4:60854158-60854177 | None:intergenic | 20.0% |
| !! | TCATAAGAAAAAAAATGCAT+AGG | + | chr4.4:60854159-60854178 | None:intergenic | 20.0% |
| !! | TGATTAAATTCTTCAATTAC+CGG | + | chr4.4:60851633-60851652 | None:intergenic | 20.0% |
| !! | TTAAGTTATGTGTTTAACAT+TGG | + | chr4.4:60853749-60853768 | None:intergenic | 20.0% |
| !!! | AAAAACTAAGCAATCTTTTT+AGG | + | chr4.4:60852132-60852151 | None:intergenic | 20.0% |
| !!! | AAAACTAAGCAATCTTTTTA+GGG | + | chr4.4:60852131-60852150 | None:intergenic | 20.0% |
| !!! | AAAGATTGCTTAGTTTTTTA+AGG | - | chr4.4:60852134-60852153 | MS.gene34846:intron | 20.0% |
| !!! | AAGATTGCTTAGTTTTTTAA+GGG | - | chr4.4:60852135-60852154 | MS.gene34846:intron | 20.0% |
| !!! | ACATTTTGTTTTGTTTTGAA+GGG | - | chr4.4:60851652-60851671 | MS.gene34846:intron | 20.0% |
| !!! | ATATATGATGAATGTTTTTG+TGG | - | chr4.4:60854102-60854121 | MS.gene34846:intron | 20.0% |
| !!! | GTTTGATTTGTATTTTGAAT+TGG | - | chr4.4:60855140-60855159 | MS.gene34846:intron | 20.0% |
| !!! | TAAGAAAATGTCTTGTTAAA+CGG | - | chr4.4:60852385-60852404 | MS.gene34846:intron | 20.0% |
| !!! | TTTCATTTTCATTTACTTAC+AGG | - | chr4.4:60853969-60853988 | MS.gene34846:CDS | 20.0% |
| ! | AAGCACTTAAATGAAAATTC+AGG | + | chr4.4:60853779-60853798 | None:intergenic | 25.0% |
| ! | ACAGTAATATGTAGAAAATG+AGG | - | chr4.4:60854596-60854615 | MS.gene34846:intron | 25.0% |
| ! | ACCCCTAAAAGAAAAATATT+GGG | + | chr4.4:60852100-60852119 | None:intergenic | 25.0% |
| ! | ACCTACAATCATAGTTAAAT+CGG | + | chr4.4:60854836-60854855 | None:intergenic | 25.0% |
| ! | AGAGATGTTGTCAAATTATA+AGG | - | chr4.4:60855266-60855285 | MS.gene34846:intron | 25.0% |
| ! | CACAATAAATCAATTATCAC+TGG | + | chr4.4:60854713-60854732 | None:intergenic | 25.0% |
| ! | CAGTTTAAACATTATCAACA+AGG | - | chr4.4:60855014-60855033 | MS.gene34846:intron | 25.0% |
| ! | CTGAATTTCATGAATTACTT+TGG | - | chr4.4:60853229-60853248 | MS.gene34846:intron | 25.0% |
| ! | GAGATGTTGTCAAATTATAA+GGG | - | chr4.4:60855267-60855286 | MS.gene34846:intron | 25.0% |
| ! | GTGTTCACAATCAATAATTA+AGG | - | chr4.4:60855174-60855193 | MS.gene34846:intron | 25.0% |
| ! | GTTAACTAAACCAAGAAATT+TGG | - | chr4.4:60853884-60853903 | MS.gene34846:CDS | 25.0% |
| ! | TAGATAAAATACTGCTGAAA+TGG | - | chr4.4:60855392-60855411 | MS.gene34846:CDS | 25.0% |
| ! | TCCACTAGAAAACAAAAAAT+GGG | + | chr4.4:60854182-60854201 | None:intergenic | 25.0% |
| ! | TGTTTAACATTGGTATGATA+GGG | + | chr4.4:60853739-60853758 | None:intergenic | 25.0% |
| ! | TTCACAATCAATAATTAAGG+TGG | - | chr4.4:60855177-60855196 | MS.gene34846:intron | 25.0% |
| !! | AATTTTACTAATACTAGGCT+GGG | + | chr4.4:60853347-60853366 | None:intergenic | 25.0% |
| !! | CGTCTAATTTTACTAATACT+AGG | + | chr4.4:60853352-60853371 | None:intergenic | 25.0% |
| !! | GGTATAACTATTTTATGTAG+TGG | - | chr4.4:60855198-60855217 | MS.gene34846:intron | 25.0% |
| !! | GTAATCTTCTTATTTCCTTT+AGG | - | chr4.4:60853512-60853531 | MS.gene34846:intron | 25.0% |
| !! | TAATTTTACTAATACTAGGC+TGG | + | chr4.4:60853348-60853367 | None:intergenic | 25.0% |
| !! | TATTCATTCGAGATTTTATG+TGG | - | chr4.4:60854295-60854314 | MS.gene34846:intron | 25.0% |
| !!! | CACATTTTGTTTTGTTTTGA+AGG | - | chr4.4:60851651-60851670 | MS.gene34846:intron | 25.0% |
| !!! | CTTGTTGATAATGTTTAAAC+TGG | + | chr4.4:60855016-60855035 | None:intergenic | 25.0% |
| !!! | GAATTCATTTTGACATTTTG+AGG | + | chr4.4:60853681-60853700 | None:intergenic | 25.0% |
| !!! | TAAGTTTGTTGTAGAATAGT+TGG | - | chr4.4:60854571-60854590 | MS.gene34846:intron | 25.0% |
| AAATGGCTTTCTGATTAAAG+TGG | - | chr4.4:60855409-60855428 | MS.gene34846:CDS | 30.0% | |
| AACAAGGATTTAACCATAAC+GGG | + | chr4.4:60854491-60854510 | None:intergenic | 30.0% | |
| AACATATAACAATCTGAAGG+TGG | + | chr4.4:60853711-60853730 | None:intergenic | 30.0% | |
| AAGGAAAACACTATTACTTG+AGG | + | chr4.4:60853322-60853341 | None:intergenic | 30.0% | |
| ACATATAACAATCTGAAGGT+GGG | + | chr4.4:60853710-60853729 | None:intergenic | 30.0% | |
| ACATGGAATTCCAAATTTCT+TGG | + | chr4.4:60853897-60853916 | None:intergenic | 30.0% | |
| ACTGAAGTTGCTAAAAAGTA+CGG | + | chr4.4:60853187-60853206 | None:intergenic | 30.0% | |
| AGATAATATGATTGCTCAAG+AGG | + | chr4.4:60855087-60855106 | None:intergenic | 30.0% | |
| AGGAAATAAGAAGATTACCA+TGG | + | chr4.4:60853510-60853529 | None:intergenic | 30.0% | |
| ATATGTTGTCATTGTTCAGT+TGG | - | chr4.4:60853138-60853157 | MS.gene34846:intron | 30.0% | |
| ATTAATTCAGCCAAATGAAG+TGG | + | chr4.4:60852857-60852876 | None:intergenic | 30.0% | |
| ATTCCCATATCCATAGAATA+TGG | + | chr4.4:60854880-60854899 | None:intergenic | 30.0% | |
| ATTGACAATCATGTCACTAA+CGG | + | chr4.4:60853010-60853029 | None:intergenic | 30.0% | |
| CAACAAGGATTTAACCATAA+CGG | + | chr4.4:60854492-60854511 | None:intergenic | 30.0% | |
| CCCCTAAAAGAAAAATATTG+GGG | + | chr4.4:60852099-60852118 | None:intergenic | 30.0% | |
| CTACCATATTCTATGGATAT+GGG | - | chr4.4:60854874-60854893 | MS.gene34846:intron | 30.0% | |
| CTGTATCCAGATTGTAAATT+GGG | + | chr4.4:60853402-60853421 | None:intergenic | 30.0% | |
| GAAGATTTCATTACAATTGG+GGG | - | chr4.4:60853283-60853302 | MS.gene34846:intron | 30.0% | |
| GACCCCTAAAAGAAAAATAT+TGG | + | chr4.4:60852101-60852120 | None:intergenic | 30.0% | |
| GATTTAAAAATTACCAGCCA+TGG | + | chr4.4:60851832-60851851 | None:intergenic | 30.0% | |
| GGAAGATTTCATTACAATTG+GGG | - | chr4.4:60853282-60853301 | MS.gene34846:intron | 30.0% | |
| GGGAAGATTTCATTACAATT+GGG | - | chr4.4:60853281-60853300 | MS.gene34846:intron | 30.0% | |
| GTACTTTAATCAAACATGCA+TGG | - | chr4.4:60852951-60852970 | MS.gene34846:intron | 30.0% | |
| GTCCACTAGAAAACAAAAAA+TGG | + | chr4.4:60854183-60854202 | None:intergenic | 30.0% | |
| GTGTTTAACATTGGTATGAT+AGG | + | chr4.4:60853740-60853759 | None:intergenic | 30.0% | |
| TATCAACAAGGAATTCTTCT+TGG | - | chr4.4:60855026-60855045 | MS.gene34846:intron | 30.0% | |
| TCACTTACATCTAAATTCTC+TGG | - | chr4.4:60851709-60851728 | MS.gene34846:intron | 30.0% | |
| TCTGTATCCAGATTGTAAAT+TGG | + | chr4.4:60853403-60853422 | None:intergenic | 30.0% | |
| TGGGAAGATTTCATTACAAT+TGG | - | chr4.4:60853280-60853299 | MS.gene34846:intron | 30.0% | |
| TTAATTCAGCCAAATGAAGT+GGG | + | chr4.4:60852856-60852875 | None:intergenic | 30.0% | |
| TTCATTTGGCTGAATTAATG+AGG | - | chr4.4:60852858-60852877 | MS.gene34846:CDS | 30.0% | |
| TTGTGTTCACTTACAGAAAT+AGG | + | chr4.4:60854911-60854930 | None:intergenic | 30.0% | |
| ! | ACCGATTTAACTATGATTGT+AGG | - | chr4.4:60854832-60854851 | MS.gene34846:intron | 30.0% |
| ! | ATACATTTTATCATGCAACC+CGG | + | chr4.4:60853567-60853586 | None:intergenic | 30.0% |
| ! | CATTTTTATGAAATTGCGAC+AGG | - | chr4.4:60855437-60855456 | MS.gene34846:intron | 30.0% |
| ! | CCCCAATATTTTTCTTTTAG+GGG | - | chr4.4:60852096-60852115 | MS.gene34846:intron | 30.0% |
| ! | GCCCCAATATTTTTCTTTTA+GGG | - | chr4.4:60852095-60852114 | MS.gene34846:intron | 30.0% |
| ! | TTATTTCTCAGAACTTAGTC+CGG | - | chr4.4:60853545-60853564 | MS.gene34846:intron | 30.0% |
| !! | AAAGGTGTTAAATTTGTTGG+TGG | - | chr4.4:60854015-60854034 | MS.gene34846:CDS | 30.0% |
| !! | AAATTTGTTGGTGGAATATC+TGG | - | chr4.4:60854024-60854043 | MS.gene34846:CDS | 30.0% |
| !! | GAGAAAGGTGTTAAATTTGT+TGG | - | chr4.4:60854012-60854031 | MS.gene34846:CDS | 30.0% |
| !! | TTTTCTTTTAGGGGTCTATT+AGG | - | chr4.4:60852105-60852124 | MS.gene34846:intron | 30.0% |
| !!! | ACCCATTTTTTGTTTTCTAG+TGG | - | chr4.4:60854178-60854197 | MS.gene34846:intron | 30.0% |
| !!! | ATTGCTTAGTTTTTTAAGGG+AGG | - | chr4.4:60852138-60852157 | MS.gene34846:intron | 30.0% |
| !!! | TTTTTTCAGAGGAACTCAAA+AGG | + | chr4.4:60852743-60852762 | None:intergenic | 30.0% |
| AAATCATACACTTGTCCTGT+GGG | - | chr4.4:60851847-60851866 | MS.gene34846:intron | 35.0% | |
| AACTATGATTGTAGGTTCAC+TGG | - | chr4.4:60854840-60854859 | MS.gene34846:intron | 35.0% | |
| AAGATGCTGTTAGGTAGATA+GGG | + | chr4.4:60853446-60853465 | None:intergenic | 35.0% | |
| ACAAGGATTTAACCATAACG+GGG | + | chr4.4:60854490-60854509 | None:intergenic | 35.0% | |
| ACATCTCTACTCTAGTTGTA+TGG | + | chr4.4:60855254-60855273 | None:intergenic | 35.0% | |
| ATCACATGTTCTCAAACTAG+AGG | + | chr4.4:60852774-60852793 | None:intergenic | 35.0% | |
| ATGGGGTACAGTATTTGTAA+TGG | + | chr4.4:60853600-60853619 | None:intergenic | 35.0% | |
| ATTGCTCTTATATCCTAGTG+TGG | - | chr4.4:60852980-60852999 | MS.gene34846:intron | 35.0% | |
| ATTTACTTACAGGCAAGAAC+TGG | - | chr4.4:60853979-60853998 | MS.gene34846:CDS | 35.0% | |
| ATTTCCAGCAATGAGATTTC+TGG | + | chr4.4:60851788-60851807 | None:intergenic | 35.0% | |
| CAAAGGAAAAAGAACGTTTG+AGG | - | chr4.4:60852352-60852371 | MS.gene34846:intron | 35.0% | |
| CAAAGTATGAAAGTAGTGAC+AGG | + | chr4.4:60853063-60853082 | None:intergenic | 35.0% | |
| CAATCTGGATACAGATAATG+TGG | - | chr4.4:60853408-60853427 | MS.gene34846:intron | 35.0% | |
| CAGATATGACTATGAGCAAT+GGG | - | chr4.4:60851684-60851703 | MS.gene34846:intron | 35.0% | |
| CATCTCTACTCTAGTTGTAT+GGG | + | chr4.4:60855253-60855272 | None:intergenic | 35.0% | |
| CATTACAATTGGGGGTTTAT+CGG | - | chr4.4:60853291-60853310 | MS.gene34846:intron | 35.0% | |
| CCTAATCTAGAAACAAGACA+TGG | + | chr4.4:60853914-60853933 | None:intergenic | 35.0% | |
| CTGGCATTAAGTAAAATCTG+TGG | + | chr4.4:60851769-60851788 | None:intergenic | 35.0% | |
| GAACTCAAAAGGTCTTCTTA+AGG | + | chr4.4:60852732-60852751 | None:intergenic | 35.0% | |
| GCATTTCCCAATTTACAATC+TGG | - | chr4.4:60853393-60853412 | MS.gene34846:intron | 35.0% | |
| GCTACCATATTCTATGGATA+TGG | - | chr4.4:60854873-60854892 | MS.gene34846:intron | 35.0% | |
| GTTACTCAAATTGTCATGGT+GGG | - | chr4.4:60854620-60854639 | MS.gene34846:intron | 35.0% | |
| TAAATCATACACTTGTCCTG+TGG | - | chr4.4:60851846-60851865 | MS.gene34846:intron | 35.0% | |
| TAAATTGGGAAATGCGAGTT+AGG | + | chr4.4:60853388-60853407 | None:intergenic | 35.0% | |
| TAAGGTCATGTAATCTCCAT+AGG | + | chr4.4:60852714-60852733 | None:intergenic | 35.0% | |
| TATTTCTCAGAACTTAGTCC+GGG | - | chr4.4:60853546-60853565 | MS.gene34846:intron | 35.0% | |
| TCACCAACTTATGCAAAAGA+GGG | - | chr4.4:60853802-60853821 | MS.gene34846:CDS | 35.0% | |
| TGCAACACAGCATTTAGAAA+TGG | + | chr4.4:60854785-60854804 | None:intergenic | 35.0% | |
| TGGGGTACAGTATTTGTAAT+GGG | + | chr4.4:60853599-60853618 | None:intergenic | 35.0% | |
| TGTTACTCAAATTGTCATGG+TGG | - | chr4.4:60854619-60854638 | MS.gene34846:intron | 35.0% | |
| TTAGTTAGGACCCAAATTGT+AGG | - | chr4.4:60852649-60852668 | MS.gene34846:intron | 35.0% | |
| TTATGAAATTGCGACAGGAA+TGG | - | chr4.4:60855442-60855461 | MS.gene34846:intron | 35.0% | |
| TTCACCAACTTATGCAAAAG+AGG | - | chr4.4:60853801-60853820 | MS.gene34846:CDS | 35.0% | |
| TTTGCAAGAAGAGATTGCAA+AGG | - | chr4.4:60852335-60852354 | MS.gene34846:intron | 35.0% | |
| ! | ACTGGAAAACTTTCTGAGAA+AGG | - | chr4.4:60853997-60854016 | MS.gene34846:CDS | 35.0% |
| ! | CCAGTTTTCATCTGCATTTT+GGG | - | chr4.4:60854933-60854952 | MS.gene34846:intron | 35.0% |
| ! | GAACTATTTGAGATCGTCAA+TGG | - | chr4.4:60852435-60852454 | MS.gene34846:intron | 35.0% |
| ! | GGCCCCAATATTTTTCTTTT+AGG | - | chr4.4:60852094-60852113 | MS.gene34846:intron | 35.0% |
| ! | TACTTTGGCTTACTAAATGC+TGG | - | chr4.4:60853244-60853263 | MS.gene34846:intron | 35.0% |
| ! | TCAGGAAATTTTCATGCGAA+TGG | + | chr4.4:60854455-60854474 | None:intergenic | 35.0% |
| ! | TCCAGTTTTCATCTGCATTT+TGG | - | chr4.4:60854932-60854951 | MS.gene34846:intron | 35.0% |
| !! | AGGTGTTACTCAAATTGTCA+TGG | - | chr4.4:60854616-60854635 | MS.gene34846:intron | 35.0% |
| !! | CCATGTCTTGTTTCTAGATT+AGG | - | chr4.4:60853911-60853930 | MS.gene34846:CDS | 35.0% |
| !! | GTACTTTTTAGCAACTTCAG+TGG | - | chr4.4:60853186-60853205 | MS.gene34846:intron | 35.0% |
| !! | GTCTTGTTTCTAGATTAGGT+CGG | - | chr4.4:60853915-60853934 | MS.gene34846:CDS | 35.0% |
| !! | TCTCTACGTGACTTAGTTTT+TGG | - | chr4.4:60855512-60855531 | MS.gene34846:intron | 35.0% |
| !! | TTCTTCCACTGATTCACAAT+GGG | + | chr4.4:60853618-60853637 | None:intergenic | 35.0% |
| !! | TTTCTTCCACTGATTCACAA+TGG | + | chr4.4:60853619-60853638 | None:intergenic | 35.0% |
| !!! | AAACGGAATTTAGCTTTTCG+TGG | - | chr4.4:60852402-60852421 | MS.gene34846:intron | 35.0% |
| !!! | AGGATCAGCTATTTTTTCAG+AGG | + | chr4.4:60852754-60852773 | None:intergenic | 35.0% |
| !!! | ATACTTATTTTTTGGGGCCT+AGG | + | chr4.4:60852066-60852085 | None:intergenic | 35.0% |
| AAAATGATCCTGAAACCCAC+AGG | + | chr4.4:60851865-60851884 | None:intergenic | 40.0% | |
| AACTTATGCAAAAGAGGGGA+TGG | - | chr4.4:60853807-60853826 | MS.gene34846:CDS | 40.0% | |
| AATGCCAGAAATCTCATTGC+TGG | - | chr4.4:60851781-60851800 | MS.gene34846:intron | 40.0% | |
| ACGTTTACCATCTGAGAAAC+AGG | + | chr4.4:60854081-60854100 | None:intergenic | 40.0% | |
| AGATGCTGTTAGGTAGATAG+GGG | + | chr4.4:60853445-60853464 | None:intergenic | 40.0% | |
| AGTGACATGATTGTCAATGC+AGG | - | chr4.4:60853012-60853031 | MS.gene34846:intron | 40.0% | |
| ATGAGTTGTGTGTATCAGCA+GGG | - | chr4.4:60852030-60852049 | MS.gene34846:intron | 40.0% | |
| ATGTAATCTCCATAGGCACA+AGG | + | chr4.4:60852707-60852726 | None:intergenic | 40.0% | |
| CAAGATGCTGTTAGGTAGAT+AGG | + | chr4.4:60853447-60853466 | None:intergenic | 40.0% | |
| CAAGGATTTAACCATAACGG+GGG | + | chr4.4:60854489-60854508 | None:intergenic | 40.0% | |
| CACCAACTTATGCAAAAGAG+GGG | - | chr4.4:60853803-60853822 | MS.gene34846:CDS | 40.0% | |
| CATTGTTCAGTTGGCATTAG+CGG | - | chr4.4:60853147-60853166 | MS.gene34846:intron | 40.0% | |
| CCCAAAATGCAGATGAAAAC+TGG | + | chr4.4:60854936-60854955 | None:intergenic | 40.0% | |
| CTAGGACGAACCTACAATTT+GGG | + | chr4.4:60852662-60852681 | None:intergenic | 40.0% | |
| CTCAATCCTGAGAACATGAA+AGG | - | chr4.4:60854210-60854229 | MS.gene34846:intron | 40.0% | |
| CTTTGCCAAGAAGAGAGAAA+AGG | - | chr4.4:60853078-60853097 | MS.gene34846:CDS | 40.0% | |
| GAAGAGAGAAAAGGAAGCAA+TGG | - | chr4.4:60853087-60853106 | MS.gene34846:CDS | 40.0% | |
| GACAATCCTTTCATGTTCTC+AGG | + | chr4.4:60854219-60854238 | None:intergenic | 40.0% | |
| GACAGCTATGACAAAGGAAA+TGG | + | chr4.4:60853477-60853496 | None:intergenic | 40.0% | |
| GACGAATTTGCAACAGTCAA+AGG | + | chr4.4:60854404-60854423 | None:intergenic | 40.0% | |
| GCAGATATGACTATGAGCAA+TGG | - | chr4.4:60851683-60851702 | MS.gene34846:intron | 40.0% | |
| GCATTTGCAGTAACAGGAAA+GGG | + | chr4.4:60851747-60851766 | None:intergenic | 40.0% | |
| GCTTACTAAATGCTGGAATC+TGG | - | chr4.4:60853251-60853270 | MS.gene34846:intron | 40.0% | |
| GGAAATGCGAGTTAGGAAAT+CGG | + | chr4.4:60853381-60853400 | None:intergenic | 40.0% | |
| GTGACATGATTGTCAATGCA+GGG | - | chr4.4:60853013-60853032 | MS.gene34846:intron | 40.0% | |
| TATGAGTTGTGTGTATCAGC+AGG | - | chr4.4:60852029-60852048 | MS.gene34846:intron | 40.0% | |
| TCGCATCTAGAAAATCTCGT+AGG | - | chr4.4:60852546-60852565 | MS.gene34846:intron | 40.0% | |
| TCTCGAATGAATAAAGCACG+TGG | + | chr4.4:60854288-60854307 | None:intergenic | 40.0% | |
| TCTTGCATACCCACTTCATT+TGG | - | chr4.4:60852844-60852863 | MS.gene34846:CDS | 40.0% | |
| TGAGAACATGTGATGTCACA+TGG | - | chr4.4:60852780-60852799 | MS.gene34846:intron | 40.0% | |
| TGGAATTGAAGCAGGGAAAT+AGG | - | chr4.4:60853939-60853958 | MS.gene34846:CDS | 40.0% | |
| TTAATCAAACATGCATGGCG+TGG | - | chr4.4:60852956-60852975 | MS.gene34846:intron | 40.0% | |
| TTGCTTGCAATGCTTGGAAA+TGG | - | chr4.4:60854252-60854271 | MS.gene34846:intron | 40.0% | |
| ! | ATCCCCTCTTTTGCATAAGT+TGG | + | chr4.4:60853808-60853827 | None:intergenic | 40.0% |
| ! | GTTGCTAAAAAGTACGGCAA+AGG | + | chr4.4:60853181-60853200 | None:intergenic | 40.0% |
| ! | TCTATGTTGCTTGCAATGCT+TGG | - | chr4.4:60854246-60854265 | MS.gene34846:intron | 40.0% |
| ! | TGCTTCCTTTTCTCTCTTCT+TGG | + | chr4.4:60853086-60853105 | None:intergenic | 40.0% |
| ! | TTGTTGGTGGAATATCTGGA+TGG | - | chr4.4:60854028-60854047 | MS.gene34846:CDS | 40.0% |
| !! | GGAATGCTTACTAGTTTGCT+TGG | - | chr4.4:60853034-60853053 | MS.gene34846:CDS | 40.0% |
| !! | TCTTCCACTGATTCACAATG+GGG | + | chr4.4:60853617-60853636 | None:intergenic | 40.0% |
| !! | TGTTTCTAGATTAGGTCGGA+TGG | - | chr4.4:60853919-60853938 | MS.gene34846:CDS | 40.0% |
| !! | TTAGCTTTTCGTGGATCTAG+TGG | - | chr4.4:60852411-60852430 | MS.gene34846:intron | 40.0% |
| !! | TTTCATCTGCATTTTGGGTC+TGG | - | chr4.4:60854938-60854957 | MS.gene34846:intron | 40.0% |
| AAGTCACGTAGAGAAGCCAA+AGG | + | chr4.4:60855506-60855525 | None:intergenic | 45.0% | |
| ACTAATACTAGGCTGGGAGA+AGG | + | chr4.4:60853341-60853360 | None:intergenic | 45.0% | |
| ACTTCAGTGGTTGTAGTGTC+AGG | - | chr4.4:60853199-60853218 | MS.gene34846:intron | 45.0% | |
| AGTGAGTGTAGGTACATACC+TGG | + | chr4.4:60851596-60851615 | None:intergenic | 45.0% | |
| ATGACAAAGGAAATGGCACC+AGG | + | chr4.4:60853470-60853489 | None:intergenic | 45.0% | |
| CCAAATTGTAGGTTCGTCCT+AGG | - | chr4.4:60852660-60852679 | MS.gene34846:intron | 45.0% | |
| CCTAGGACGAACCTACAATT+TGG | + | chr4.4:60852663-60852682 | None:intergenic | 45.0% | |
| CTGCACATAACTCAACGCAA+AGG | + | chr4.4:60855320-60855339 | None:intergenic | 45.0% | |
| CTGCTACGTTACTCTTCATG+TGG | - | chr4.4:60854052-60854071 | MS.gene34846:CDS | 45.0% | |
| GCATGGTTACAGTTCACCTT+TGG | - | chr4.4:60855487-60855506 | MS.gene34846:intron | 45.0% | |
| GGCATTTGCAGTAACAGGAA+AGG | + | chr4.4:60851748-60851767 | None:intergenic | 45.0% | |
| GGCCACCAAAATCTCAGAAA+CGG | - | chr4.4:60852681-60852700 | MS.gene34846:intron | 45.0% | |
| GTTACTTACAACCCCCGTTA+TGG | - | chr4.4:60854475-60854494 | MS.gene34846:intron | 45.0% | |
| TCTGTGGCATTTGCAGTAAC+AGG | + | chr4.4:60851753-60851772 | None:intergenic | 45.0% | |
| TGTACCCCATTGTGAATCAG+TGG | - | chr4.4:60853610-60853629 | MS.gene34846:CDS | 45.0% | |
| TTCCTTTGTCATAGCTGTCG+TGG | - | chr4.4:60853478-60853497 | MS.gene34846:intron | 45.0% | |
| TTCTTCTTGGCAGCAACTGT+CGG | - | chr4.4:60855039-60855058 | MS.gene34846:intron | 45.0% | |
| ! | ACTCAAATTGTCATGGTGGG+TGG | - | chr4.4:60854623-60854642 | MS.gene34846:intron | 45.0% |
| ! | ATGGCACAAGACAGGTTGAA+TGG | - | chr4.4:60852454-60852473 | MS.gene34846:intron | 45.0% |
| ! | CTGCTCTTTTTGCGATTCCA+TGG | - | chr4.4:60851812-60851831 | MS.gene34846:intron | 45.0% |
| ! | TCGTGGGCTACCATATTCTA+TGG | - | chr4.4:60854867-60854886 | MS.gene34846:intron | 45.0% |
| ! | TCTTTTTGCGATTCCATGGC+TGG | - | chr4.4:60851816-60851835 | MS.gene34846:intron | 45.0% |
| ! | TTTAAGGGAGGTGTGCTTGT+TGG | - | chr4.4:60852150-60852169 | MS.gene34846:intron | 45.0% |
| !! | AACGCAAAGGCTAGCTTAAG+AGG | + | chr4.4:60855307-60855326 | None:intergenic | 45.0% |
| !! | GAGGTGTGCTTGTTGGTAAT+GGG | - | chr4.4:60852157-60852176 | MS.gene34846:intron | 45.0% |
| !! | TAGGTTCACTGGTTCATCGT+GGG | - | chr4.4:60854851-60854870 | MS.gene34846:intron | 45.0% |
| !!! | CAAGGCCGTTTCTGAGATTT+TGG | + | chr4.4:60852689-60852708 | None:intergenic | 45.0% |
| !!! | TTCTGAGATTTTGGTGGCCT+AGG | + | chr4.4:60852680-60852699 | None:intergenic | 45.0% |
| ACACTTGTCCTGTGGGTTTC+AGG | - | chr4.4:60851854-60851873 | MS.gene34846:intron | 50.0% | |
| ACGGGGGTTGTAAGTAACTC+AGG | + | chr4.4:60854473-60854492 | None:intergenic | 50.0% | |
| AGCCACGACAGCTATGACAA+AGG | + | chr4.4:60853483-60853502 | None:intergenic | 50.0% | |
| AGGTCGGATGGAATTGAAGC+AGG | - | chr4.4:60853931-60853950 | MS.gene34846:CDS | 50.0% | |
| CACTAACGGTCTACCACACT+AGG | + | chr4.4:60852996-60853015 | None:intergenic | 50.0% | |
| CTACCTAACAGCATCTTGCC+TGG | - | chr4.4:60853449-60853468 | MS.gene34846:intron | 50.0% | |
| GAGTGTGAGTGAGTGAGTGT+AGG | + | chr4.4:60851607-60851626 | None:intergenic | 50.0% | |
| GATCGTCAATGGCACAAGAC+AGG | - | chr4.4:60852446-60852465 | MS.gene34846:intron | 50.0% | |
| GGTCGGATGGAATTGAAGCA+GGG | - | chr4.4:60853932-60853951 | MS.gene34846:CDS | 50.0% | |
| GTGTAGGTACATACCTGGTG+AGG | + | chr4.4:60851591-60851610 | None:intergenic | 50.0% | |
| TAGGTACATACCTGGTGAGG+TGG | + | chr4.4:60851588-60851607 | None:intergenic | 50.0% | |
| TCACTCACTCACACTCACAC+CGG | - | chr4.4:60851611-60851630 | MS.gene34846:CDS | 50.0% | |
| TCATTCTGATCCACCTCACC+AGG | - | chr4.4:60851575-60851594 | MS.gene34846:CDS | 50.0% | |
| TGGAGAGACAGTGTAGTGCA+TGG | - | chr4.4:60855470-60855489 | MS.gene34846:intron | 50.0% | |
| TTGCGACAGGAATGGCTTTC+TGG | - | chr4.4:60855450-60855469 | MS.gene34846:intron | 50.0% | |
| ! | ATGCTGGAATCTGGCGCTTT+TGG | - | chr4.4:60853260-60853279 | MS.gene34846:intron | 50.0% |
| ! | GCAATGGTAGTGCAGACACT+TGG | - | chr4.4:60853103-60853122 | MS.gene34846:CDS | 50.0% |
| ! | GGAGGTGTGCTTGTTGGTAA+TGG | - | chr4.4:60852156-60852175 | MS.gene34846:intron | 50.0% |
| ! | GTGGATGCCTGTTTCTCAGA+TGG | - | chr4.4:60854071-60854090 | MS.gene34846:intron | 50.0% |
| ! | TGCTGGAATCTGGCGCTTTT+GGG | - | chr4.4:60853261-60853280 | MS.gene34846:intron | 50.0% |
| !! | CAAATTGTCATGGTGGGTGG+TGG | - | chr4.4:60854626-60854645 | MS.gene34846:intron | 50.0% |
| !! | CAACTGTCGGTTTGGTCTCA+TGG | - | chr4.4:60855052-60855071 | MS.gene34846:intron | 50.0% |
| !! | GTAGGTTCACTGGTTCATCG+TGG | - | chr4.4:60854850-60854869 | MS.gene34846:intron | 50.0% |
| !! | GTCGGTTTGGTCTCATGGAT+AGG | - | chr4.4:60855057-60855076 | MS.gene34846:intron | 50.0% |
| !!! | GGCCGTTTCTGAGATTTTGG+TGG | + | chr4.4:60852686-60852705 | None:intergenic | 50.0% |
| AGCAGGGCTGTATCTGTCCT+AGG | - | chr4.4:60852046-60852065 | MS.gene34846:CDS | 55.0% | |
| AGCTGTCGTGGCTGTTACCA+TGG | - | chr4.4:60853490-60853509 | MS.gene34846:intron | 55.0% | |
| GCACCAGGCAAGATGCTGTT+AGG | + | chr4.4:60853455-60853474 | None:intergenic | 55.0% | |
| ! | CAGAAACGGCCTTGTGCCTA+TGG | - | chr4.4:60852695-60852714 | MS.gene34846:intron | 55.0% |
| ! | CTTGGCAGCAACTGTCGGTT+TGG | - | chr4.4:60855044-60855063 | MS.gene34846:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 60851568 | 60855547 | 60851568 | ID=MS.gene34846 |
| chr4.4 | mRNA | 60851568 | 60855547 | 60851568 | ID=MS.gene34846.t1;Parent=MS.gene34846 |
| chr4.4 | exon | 60855519 | 60855547 | 60855519 | ID=MS.gene34846.t1.exon1;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60855519 | 60855547 | 60855519 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60855278 | 60855428 | 60855278 | ID=MS.gene34846.t1.exon2;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60855278 | 60855428 | 60855278 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60853791 | 60854081 | 60853791 | ID=MS.gene34846.t1.exon3;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60853791 | 60854081 | 60853791 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60853604 | 60853693 | 60853604 | ID=MS.gene34846.t1.exon4;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60853604 | 60853693 | 60853604 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60853023 | 60853124 | 60853023 | ID=MS.gene34846.t1.exon5;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60853023 | 60853124 | 60853023 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60852799 | 60852917 | 60852799 | ID=MS.gene34846.t1.exon6;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60852799 | 60852917 | 60852799 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60852199 | 60852261 | 60852199 | ID=MS.gene34846.t1.exon7;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60852199 | 60852261 | 60852199 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60852037 | 60852098 | 60852037 | ID=MS.gene34846.t1.exon8;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60852037 | 60852098 | 60852037 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| chr4.4 | exon | 60851568 | 60851656 | 60851568 | ID=MS.gene34846.t1.exon9;Parent=MS.gene34846.t1 |
| chr4.4 | CDS | 60851568 | 60851656 | 60851568 | ID=cds.MS.gene34846.t1;Parent=MS.gene34846.t1 |
| Gene Sequence |
| Protein sequence |
