AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37842

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37842.t1 MTR_5g087620 95.894 341 14 0 1 341 1 341 0.0 690
MS.gene37842.t1 MTR_5g087620 94.030 67 4 0 342 408 430 496 4.11e-32 127
MS.gene37842.t1 MTR_2g098430 44.643 336 170 3 7 341 3 323 1.09e-91 285
MS.gene37842.t1 MTR_7g117405 32.184 348 214 8 9 353 11 339 1.04e-39 148
MS.gene37842.t1 MTR_8g066610 30.061 326 213 6 10 331 9 323 4.54e-39 146
MS.gene37842.t1 MTR_5g045960 29.787 329 211 9 7 330 6 319 4.83e-39 146
MS.gene37842.t1 MTR_7g102560 30.321 343 200 10 3 331 2 319 7.40e-38 143
MS.gene37842.t1 MTR_7g055710 27.628 333 224 6 2 331 3 321 3.42e-36 139
MS.gene37842.t1 MTR_5g045970 29.290 338 221 9 1 334 7 330 5.03e-35 135
MS.gene37842.t1 MTR_4g485630 29.483 329 201 9 10 331 9 313 1.14e-34 134
MS.gene37842.t1 MTR_7g102460 29.940 334 214 8 4 331 3 322 1.57e-34 134
MS.gene37842.t1 MTR_7g102550 30.303 330 203 10 10 330 9 320 2.75e-33 130
MS.gene37842.t1 MTR_1g062380 28.614 339 223 10 1 334 7 331 3.84e-33 130
MS.gene37842.t1 MTR_0536s0020 29.641 334 199 10 1 330 9 310 4.06e-33 130
MS.gene37842.t1 MTR_4g485620 28.367 349 219 11 22 366 1 322 1.17e-32 128
MS.gene37842.t1 MTR_4g024020 29.167 336 216 9 4 331 3 324 1.57e-32 128
MS.gene37842.t1 MTR_4g485590 29.503 322 190 8 10 331 9 293 2.27e-32 126
MS.gene37842.t1 MTR_7g070740 27.327 333 225 6 2 331 3 321 1.86e-31 125
MS.gene37842.t1 MTR_2g059240 32.722 327 202 8 9 331 12 324 4.83e-31 124
MS.gene37842.t1 MTR_7g102490 27.003 337 222 8 4 331 3 324 1.33e-30 123
MS.gene37842.t1 MTR_4g108250 25.816 337 229 7 2 331 3 325 1.66e-30 122
MS.gene37842.t1 MTR_7g102450 28.615 325 202 7 9 331 10 306 3.71e-30 121
MS.gene37842.t1 MTR_4g117980 29.231 325 194 10 15 330 16 313 3.86e-30 121
MS.gene37842.t1 MTR_7g070780 27.027 333 226 7 2 331 3 321 2.82e-29 119
MS.gene37842.t1 MTR_7g070870 28.446 341 210 10 1 335 10 322 5.63e-29 118
MS.gene37842.t1 MTR_7g070910 26.647 334 227 7 2 331 3 322 1.74e-28 117
MS.gene37842.t1 MTR_7g070610 26.462 325 222 6 10 331 13 323 2.75e-28 116
MS.gene37842.t1 MTR_7g070660 26.647 334 221 8 2 331 3 316 3.82e-28 116
MS.gene37842.t1 MTR_7g071040 25.749 334 230 7 2 331 9 328 5.85e-28 115
MS.gene37842.t1 MTR_5g039900 27.300 337 225 7 1 331 1 323 6.57e-28 115
MS.gene37842.t1 MTR_7g070800 28.182 330 215 9 6 331 2 313 7.25e-28 115
MS.gene37842.t1 MTR_7g070810 27.381 336 219 8 3 335 2 315 8.50e-28 115
MS.gene37842.t1 MTR_2g034990 29.080 337 199 11 5 330 6 313 1.38e-27 114
MS.gene37842.t1 MTR_0036s0220 26.361 349 216 12 4 332 6 333 1.55e-27 114
MS.gene37842.t1 MTR_4g117890 28.012 332 203 10 3 330 6 305 2.51e-27 113
MS.gene37842.t1 MTR_0009s0240 29.341 334 204 12 5 333 2 308 4.43e-27 112
MS.gene37842.t1 MTR_6g038220 28.358 335 207 10 2 331 3 309 8.85e-27 111
MS.gene37842.t1 MTR_5g016660 26.954 371 242 10 1 366 1 347 1.00e-26 112
MS.gene37842.t1 MTR_5g464760 29.060 351 202 14 6 332 8 335 1.04e-26 112
MS.gene37842.t1 MTR_3g479520 26.989 352 207 11 6 332 11 337 1.06e-26 112
MS.gene37842.t1 MTR_6g035295 28.399 331 207 10 11 331 13 323 1.06e-26 112
MS.gene37842.t1 MTR_7g070940 26.471 340 222 8 3 338 2 317 1.28e-26 111
MS.gene37842.t1 MTR_4g031800 27.434 339 213 8 6 337 4 316 1.65e-26 111
MS.gene37842.t1 MTR_6g035265 28.349 321 193 10 15 330 16 304 2.52e-26 110
MS.gene37842.t1 MTR_0536s0010 27.928 333 202 11 2 330 13 311 5.14e-26 109
MS.gene37842.t1 MTR_2g008210 28.367 349 200 13 7 332 8 329 7.47e-26 109
MS.gene37842.t1 MTR_7g070930 25.749 334 230 8 2 331 6 325 7.74e-26 109
MS.gene37842.t1 MTR_6g014186 25.501 349 221 12 5 332 2 332 3.01e-25 107
MS.gene37842.t1 MTR_4g117950 27.964 329 200 12 6 330 2 297 3.77e-25 107
MS.gene37842.t1 MTR_5g035580 26.829 328 202 9 10 331 13 308 4.77e-25 107
MS.gene37842.t1 MTR_7g070860 27.914 326 213 10 10 331 7 314 5.96e-25 106
MS.gene37842.t1 MTR_3g079480 27.326 344 214 11 7 332 18 343 7.37e-25 106
MS.gene37842.t1 MTR_4g117960 27.554 323 200 9 15 330 16 311 1.33e-24 105
MS.gene37842.t1 MTR_4g094220 26.738 374 225 15 8 357 5 353 1.59e-24 105
MS.gene37842.t1 MTR_5g035560 26.829 328 202 9 10 331 11 306 3.55e-24 104
MS.gene37842.t1 MTR_5g464810 27.697 343 207 13 10 332 12 333 3.60e-24 104
MS.gene37842.t1 MTR_5g064240 27.697 343 207 13 10 332 12 333 3.60e-24 104
MS.gene37842.t1 MTR_5g040030 26.888 331 228 8 3 331 7 325 4.48e-24 104
MS.gene37842.t1 MTR_2g035020 28.955 335 202 11 5 330 6 313 7.31e-24 103
MS.gene37842.t1 MTR_7g102520 25.970 335 222 11 10 335 12 329 7.80e-24 103
MS.gene37842.t1 MTR_4g118000 26.875 320 195 10 15 330 17 301 8.85e-24 103
MS.gene37842.t1 MTR_6g014040 25.568 352 226 13 1 332 1 336 2.37e-23 102
MS.gene37842.t1 MTR_8g044140 29.630 297 187 9 41 331 6 286 3.23e-23 101
MS.gene37842.t1 MTR_6g014270 25.706 354 216 13 5 332 2 334 3.61e-23 101
MS.gene37842.t1 MTR_6g038200 28.313 332 196 14 10 331 11 310 3.97e-23 101
MS.gene37842.t1 MTR_5g027210 24.138 348 206 8 11 331 5 321 5.60e-23 100
MS.gene37842.t1 MTR_6g038240 26.536 358 212 14 3 344 4 326 2.09e-22 99.0
MS.gene37842.t1 MTR_7g012120 27.928 333 205 11 5 330 11 315 2.39e-22 99.4
MS.gene37842.t1 MTR_3g479470 27.035 344 215 12 7 332 10 335 3.49e-22 98.6
MS.gene37842.t1 MTR_6g035185 28.963 328 191 12 15 330 16 313 4.19e-22 98.6
MS.gene37842.t1 MTR_6g013440 25.568 352 226 12 1 332 1 336 5.32e-22 98.2
MS.gene37842.t1 MTR_3g479490 26.571 350 211 14 6 332 2 328 6.28e-22 97.8
MS.gene37842.t1 MTR_8g071070 27.493 371 218 14 5 352 2 344 7.01e-22 97.8
MS.gene37842.t1 MTR_6g014020 25.779 353 223 15 1 332 1 335 7.14e-22 97.8
MS.gene37842.t1 MTR_6g014187 25.284 352 226 14 1 332 1 335 2.29e-21 96.3
MS.gene37842.t1 MTR_6g014150 25.714 350 219 14 5 332 2 332 2.99e-21 95.9
MS.gene37842.t1 MTR_8g009055 28.655 342 192 12 6 333 2 305 6.53e-21 94.7
MS.gene37842.t1 MTR_5g066410 28.000 325 198 9 13 333 1 293 8.91e-21 94.4
MS.gene37842.t1 MTR_8g007565 28.743 334 209 12 6 331 3 315 1.06e-20 94.4
MS.gene37842.t1 MTR_6g038230 26.822 343 205 14 10 337 11 322 1.25e-20 94.0
MS.gene37842.t1 MTR_6g014290 24.286 350 230 14 1 332 1 333 1.34e-20 94.0
MS.gene37842.t1 MTR_8g068360 27.907 344 194 15 6 331 8 315 1.91e-20 93.6
MS.gene37842.t1 MTR_6g011340 27.011 348 225 12 1 332 1 335 2.05e-20 93.6
MS.gene37842.t1 MTR_4g485640 27.500 320 187 9 20 330 219 502 2.32e-20 94.0
MS.gene37842.t1 MTR_6g013450 26.184 359 215 16 1 332 1 336 3.42e-20 92.8
MS.gene37842.t1 MTR_5g067170 27.077 325 199 10 15 330 16 311 3.82e-20 92.4
MS.gene37842.t1 MTR_6g014250 25.706 354 220 16 1 332 1 333 3.99e-20 92.4
MS.gene37842.t1 MTR_6g014050 26.346 353 222 14 1 332 1 336 4.00e-20 92.4
MS.gene37842.t1 MTR_8g059425 24.719 356 221 14 1 332 1 333 4.06e-20 92.4
MS.gene37842.t1 MTR_7g013180 27.083 336 205 12 9 335 4 308 7.62e-20 91.3
MS.gene37842.t1 MTR_8g466240 25.153 326 212 9 10 331 8 305 8.48e-20 91.3
MS.gene37842.t1 MTR_8g007650 28.443 334 210 12 6 331 3 315 9.72e-20 91.3
MS.gene37842.t1 MTR_3g008010 24.286 350 230 14 1 332 1 333 9.96e-20 91.3
MS.gene37842.t1 MTR_4g008630 28.182 330 201 10 11 338 15 310 1.42e-19 90.9
MS.gene37842.t1 MTR_3g009510 24.173 393 245 13 11 383 6 365 1.45e-19 90.9
MS.gene37842.t1 MTR_6g014200 25.143 350 221 15 5 332 2 332 1.46e-19 90.9
MS.gene37842.t1 MTR_1g040310 26.994 326 213 10 12 331 17 323 2.17e-19 90.5
MS.gene37842.t1 MTR_8g008990 28.144 334 204 11 6 333 2 305 2.47e-19 90.1
MS.gene37842.t1 MTR_7g011470 26.608 342 220 11 1 332 1 321 2.84e-19 89.7
MS.gene37842.t1 MTR_8g068330 27.729 339 210 10 6 335 4 316 3.03e-19 89.7
MS.gene37842.t1 MTR_7g011470 27.273 341 215 13 1 332 1 317 4.38e-19 89.4
MS.gene37842.t1 MTR_0288s0020 23.496 349 217 12 1 332 1 316 5.01e-19 89.0
MS.gene37842.t1 MTR_1g029540 26.061 330 197 11 15 338 19 307 6.79e-19 88.6
MS.gene37842.t1 MTR_8g032950 25.000 332 216 9 5 330 7 311 9.25e-19 88.6
MS.gene37842.t1 MTR_6g038300 25.000 360 224 13 2 349 3 328 9.96e-19 88.2
MS.gene37842.t1 MTR_6g014220 25.429 350 226 13 1 332 1 333 1.40e-18 87.8
MS.gene37842.t1 MTR_1g107380 26.741 359 219 15 2 344 3 333 1.40e-18 87.8
MS.gene37842.t1 MTR_6g014310 25.852 352 225 13 1 332 1 336 1.66e-18 87.8
MS.gene37842.t1 MTR_7g080950 24.706 340 206 9 6 332 2 304 2.38e-18 87.0
MS.gene37842.t1 MTR_8g068340 27.679 336 206 13 6 331 8 316 2.78e-18 87.0
MS.gene37842.t1 MTR_5g029800 26.061 330 202 11 11 330 12 309 4.46e-18 86.3
MS.gene37842.t1 MTR_3g031450 23.881 335 197 13 10 331 18 307 7.41e-18 85.5
MS.gene37842.t1 MTR_6g013960 25.496 353 222 17 1 331 1 334 7.44e-18 85.5
MS.gene37842.t1 MTR_3g069710 26.220 328 201 10 11 332 13 305 1.08e-17 85.1
MS.gene37842.t1 MTR_3g031400 23.952 334 196 12 10 331 18 305 1.34e-17 84.7
MS.gene37842.t1 MTR_5g072830 26.239 343 196 11 1 329 1 300 1.36e-17 84.7
MS.gene37842.t1 MTR_7g080935 24.024 333 211 10 8 331 9 308 1.39e-17 84.7
MS.gene37842.t1 MTR_2g046620 25.148 338 213 13 3 331 8 314 1.61e-17 84.7
MS.gene37842.t1 MTR_7g067120 23.708 329 208 7 3 331 2 287 1.65e-17 84.3
MS.gene37842.t1 MTR_8g074550 24.879 414 226 15 7 395 5 358 2.53e-17 84.3
MS.gene37842.t1 MTR_4g064987 28.169 355 202 14 8 353 6 316 6.04e-17 82.8
MS.gene37842.t1 MTR_6g033675 28.324 346 190 18 8 331 2 311 6.95e-17 82.8
MS.gene37842.t1 MTR_5g072820 25.073 343 200 10 1 329 1 300 6.99e-17 82.4
MS.gene37842.t1 MTR_5g090700 23.343 347 209 12 7 333 2 311 7.83e-17 82.4
MS.gene37842.t1 MTR_8g090095 24.119 369 239 12 15 378 30 362 9.27e-17 82.4
MS.gene37842.t1 MTR_6g013900 25.141 354 223 16 1 332 1 334 9.94e-17 82.4
MS.gene37842.t1 MTR_6g013990 25.753 365 206 14 1 332 1 333 1.20e-16 82.0
MS.gene37842.t1 MTR_5g090620 24.269 342 210 13 7 333 2 309 1.77e-16 81.6
MS.gene37842.t1 MTR_6g042310 24.169 331 216 12 7 331 15 316 1.78e-16 81.3
MS.gene37842.t1 MTR_5g072810 23.977 342 212 8 1 331 3 307 1.81e-16 81.3
MS.gene37842.t1 MTR_4g064987 28.056 360 202 14 8 353 6 322 2.79e-16 80.9
MS.gene37842.t1 MTR_8g009050 26.627 338 204 12 6 333 2 305 3.14e-16 80.5
MS.gene37842.t1 MTR_2g035040 32.057 209 120 7 130 330 24 218 4.26e-16 79.7
MS.gene37842.t1 MTR_7g080940 24.024 333 211 10 8 331 9 308 4.56e-16 80.1
MS.gene37842.t1 MTR_7g080900 24.699 332 213 12 7 331 9 310 4.71e-16 80.1
MS.gene37842.t1 MTR_5g031830 27.429 350 196 14 9 332 11 328 4.97e-16 80.1
MS.gene37842.t1 MTR_8g006710 26.331 338 203 11 7 333 3 305 7.45e-16 79.3
MS.gene37842.t1 MTR_2g008220 24.251 334 227 8 2 331 6 317 8.26e-16 79.3
MS.gene37842.t1 MTR_6g023665 25.220 341 204 13 6 333 9 311 1.03e-15 79.0
MS.gene37842.t1 MTR_6g033625 26.549 339 205 11 8 331 2 311 1.18e-15 79.0
MS.gene37842.t1 MTR_6g013680 23.599 339 203 12 112 406 49 375 1.67e-15 77.8
MS.gene37842.t1 MTR_3g479620 30.675 163 98 5 6 166 2 151 1.84e-15 74.3
MS.gene37842.t1 MTR_6g033615 27.761 335 192 9 8 331 2 297 2.22e-15 78.2
MS.gene37842.t1 MTR_6g013920 24.929 353 225 16 1 332 1 334 2.75e-15 77.8
MS.gene37842.t1 MTR_6g033725 26.513 347 192 16 8 331 2 308 3.71e-15 77.4
MS.gene37842.t1 MTR_5g031860 27.859 341 205 12 9 332 11 327 4.35e-15 77.0
MS.gene37842.t1 MTR_6g488280 25.220 341 204 14 6 333 2 304 4.85e-15 77.0
MS.gene37842.t1 MTR_0428s0010 25.220 341 204 14 6 333 2 304 4.85e-15 77.0
MS.gene37842.t1 MTR_6g014170 24.716 352 210 16 1 332 1 317 4.87e-15 77.0
MS.gene37842.t1 MTR_2g008225 24.107 336 223 10 3 331 8 318 4.97e-15 77.0
MS.gene37842.t1 MTR_3g084530 25.656 343 202 13 10 331 6 316 5.23e-15 77.0
MS.gene37842.t1 MTR_7g470610 28.205 195 117 3 139 331 5 178 1.05e-14 74.7
MS.gene37842.t1 MTR_7g070583 28.205 195 117 3 139 331 5 178 1.05e-14 74.7
MS.gene37842.t1 MTR_5g031840 26.404 356 190 15 9 332 4 319 1.30e-14 75.9
MS.gene37842.t1 MTR_8g083290 26.901 342 201 17 9 331 2 313 1.32e-14 75.9
MS.gene37842.t1 MTR_1g107350 23.795 332 233 8 5 333 3 317 1.62e-14 75.5
MS.gene37842.t1 MTR_5g058320 24.355 349 218 15 1 332 1 320 1.71e-14 75.5
MS.gene37842.t1 MTR_5g072860 24.036 337 208 11 10 331 18 321 1.83e-14 75.1
MS.gene37842.t1 MTR_8g465670 25.882 340 202 13 6 333 3 304 1.89e-14 75.1
MS.gene37842.t1 MTR_1g019510 26.331 338 203 12 6 333 2 303 2.48e-14 74.7
MS.gene37842.t1 MTR_2g008226 25.434 346 219 14 1 331 1 322 3.59e-14 74.3
MS.gene37842.t1 MTR_8g009073 26.496 351 188 15 6 333 2 305 3.63e-14 74.3
MS.gene37842.t1 MTR_1g090270 24.776 335 201 11 10 333 15 309 4.50e-14 73.9
MS.gene37842.t1 MTR_7g046490 26.957 345 195 14 6 335 2 304 4.60e-14 73.9
MS.gene37842.t1 MTR_1g032490 24.198 343 226 11 1 333 1 319 5.33e-14 73.9
MS.gene37842.t1 MTR_5g090580 23.009 339 218 10 7 333 2 309 6.05e-14 73.6
MS.gene37842.t1 MTR_8g009067 25.882 340 204 10 6 333 2 305 6.90e-14 73.6
MS.gene37842.t1 MTR_8g009063 25.948 343 204 13 2 331 5 310 7.24e-14 73.6
MS.gene37842.t1 MTR_0184s0040 25.806 372 228 13 7 367 18 352 7.85e-14 73.6
MS.gene37842.t1 MTR_0078s0190 25.806 372 228 13 7 367 18 352 7.85e-14 73.6
MS.gene37842.t1 MTR_8g027870 25.075 335 207 12 6 333 14 311 1.15e-13 72.8
MS.gene37842.t1 MTR_8g088560 25.356 351 235 9 1 348 1 327 1.28e-13 72.8
MS.gene37842.t1 MTR_6g013435 24.521 261 145 8 184 406 61 307 1.34e-13 71.6
MS.gene37842.t1 MTR_4g123553 24.269 342 213 13 2 331 6 313 1.40e-13 72.4
MS.gene37842.t1 MTR_8g006730 24.561 342 218 11 7 340 3 312 1.59e-13 72.4
MS.gene37842.t1 MTR_7g013240 25.982 331 200 14 9 332 5 297 1.87e-13 72.0
MS.gene37842.t1 MTR_5g019580 27.507 349 192 14 7 333 4 313 2.16e-13 72.0
MS.gene37842.t1 MTR_5g090670 23.404 329 231 8 7 333 2 311 2.55e-13 71.6
MS.gene37842.t1 MTR_8g008970 26.023 342 201 10 6 333 2 305 3.58e-13 71.6
MS.gene37842.t1 MTR_6g033660 25.672 335 206 10 11 331 5 310 3.94e-13 71.2
MS.gene37842.t1 MTR_8g006270 25.215 349 192 13 6 333 2 302 4.41e-13 70.9
MS.gene37842.t1 MTR_8g006220 24.058 345 202 11 6 333 2 303 5.07e-13 70.9
MS.gene37842.t1 MTR_0078s0010 24.776 335 213 9 7 333 3 306 5.57e-13 70.9
MS.gene37842.t1 MTR_1g107315 24.781 343 216 12 5 333 3 317 6.86e-13 70.5
MS.gene37842.t1 MTR_6g036650 22.985 335 224 10 6 331 14 323 1.40e-12 69.3
MS.gene37842.t1 MTR_0078s0060 24.699 332 210 10 10 333 6 305 1.61e-12 69.3
MS.gene37842.t1 MTR_5g019580 25.298 336 188 12 7 333 56 337 1.83e-12 69.3
MS.gene37842.t1 MTR_8g027885 24.629 337 206 13 6 333 14 311 1.91e-12 68.9
MS.gene37842.t1 MTR_2g046750 26.444 329 206 15 12 333 9 308 2.24e-12 68.9
MS.gene37842.t1 MTR_7g013260 23.030 330 212 12 9 332 5 298 5.85e-12 67.4
MS.gene37842.t1 MTR_3g069690 23.460 341 213 12 1 332 1 302 6.01e-12 67.4
MS.gene37842.t1 MTR_4g079270 24.242 363 228 11 10 366 8 329 7.68e-12 67.0
MS.gene37842.t1 MTR_5g090660 23.894 339 213 14 7 333 2 307 9.89e-12 67.0
MS.gene37842.t1 MTR_8g009067 36.364 110 58 2 226 333 88 187 1.54e-11 65.9
MS.gene37842.t1 MTR_4g117970 27.313 227 132 9 85 299 48 253 1.60e-11 65.9
MS.gene37842.t1 MTR_2g098425 33.824 136 73 5 12 138 14 141 1.89e-11 63.5
MS.gene37842.t1 MTR_3g084520 24.128 344 206 10 10 331 6 316 2.12e-11 65.9
MS.gene37842.t1 MTR_4g128720 23.964 338 208 11 7 331 12 313 3.40e-11 65.1
MS.gene37842.t1 MTR_5g016480 25.826 333 201 17 18 332 16 320 3.93e-11 65.1
MS.gene37842.t1 MTR_0536s0030 25.500 200 122 6 41 239 9 182 5.95e-11 63.9
MS.gene37842.t1 MTR_8g009073 33.083 133 77 4 203 333 54 176 7.64e-11 63.5
MS.gene37842.t1 MTR_6g014190 28.169 142 97 3 193 332 4 142 9.00e-11 62.8
MS.gene37842.t1 MTR_5g070040 23.837 344 212 15 6 333 7 316 9.48e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37842.t1 AT5G12890 39.481 347 187 4 1 341 1 330 1.36e-81 259
MS.gene37842.t1 AT2G36780 32.822 326 201 7 10 331 14 325 3.90e-47 168
MS.gene37842.t1 AT2G36750 34.337 332 187 9 10 331 10 320 7.35e-46 165
MS.gene37842.t1 AT2G36770 31.595 326 205 7 10 331 14 325 2.12e-45 164
MS.gene37842.t1 AT2G36800 33.333 351 209 10 1 344 2 334 3.11e-45 163
MS.gene37842.t1 AT4G34135 30.172 348 219 7 2 340 3 335 4.21e-41 149
MS.gene37842.t1 AT2G36760 31.003 329 203 10 10 331 14 325 3.20e-39 147
MS.gene37842.t1 AT4G34135 30.383 339 212 7 2 331 3 326 3.82e-39 146
MS.gene37842.t1 AT2G15480 30.882 340 211 8 1 331 1 325 5.21e-39 146
MS.gene37842.t1 AT2G15480 30.882 340 211 8 1 331 1 325 6.83e-39 146
MS.gene37842.t1 AT1G73880 30.539 334 198 13 8 333 12 319 2.95e-38 144
MS.gene37842.t1 AT2G15490 30.606 330 205 8 10 330 7 321 3.22e-38 144
MS.gene37842.t1 AT2G15490 30.606 330 205 8 10 330 7 321 3.76e-38 144
MS.gene37842.t1 AT2G36790 32.551 341 205 9 10 344 13 334 4.04e-38 144
MS.gene37842.t1 AT4G34131 30.058 346 218 7 1 337 1 331 7.37e-37 140
MS.gene37842.t1 AT3G53160 30.581 327 207 10 10 331 8 319 1.85e-36 139
MS.gene37842.t1 AT3G53150 29.003 331 215 9 7 331 19 335 5.29e-36 138
MS.gene37842.t1 AT4G34138 28.863 343 197 11 8 330 9 324 1.98e-32 128
MS.gene37842.t1 AT2G16890 28.916 332 203 8 10 331 9 317 1.32e-30 122
MS.gene37842.t1 AT1G10400 26.946 334 215 7 7 331 4 317 1.54e-30 122
MS.gene37842.t1 AT2G16890 28.916 332 203 8 10 331 9 317 1.64e-30 122
MS.gene37842.t1 AT1G22380 26.923 364 223 14 6 350 9 348 2.46e-28 116
MS.gene37842.t1 AT2G16890 28.395 324 199 8 10 323 9 309 4.82e-28 112
MS.gene37842.t1 AT2G16890 28.395 324 199 8 10 323 9 309 4.82e-28 112
MS.gene37842.t1 AT1G22370 26.844 339 223 10 4 332 7 330 1.85e-27 114
MS.gene37842.t1 AT1G22360 26.857 350 220 12 1 332 1 332 4.20e-27 113
MS.gene37842.t1 AT1G22360 26.857 350 220 12 1 332 1 332 5.90e-27 112
MS.gene37842.t1 AT1G22400 26.513 347 214 11 7 332 10 336 3.22e-26 110
MS.gene37842.t1 AT5G14860 26.176 340 210 9 10 331 8 324 6.43e-26 109
MS.gene37842.t1 AT5G03490 27.761 335 216 8 7 337 16 328 1.70e-25 108
MS.gene37842.t1 AT1G22340 26.225 347 214 10 7 332 10 335 4.59e-25 107
MS.gene37842.t1 AT1G51210 27.246 334 212 11 8 337 18 324 1.34e-24 105
MS.gene37842.t1 AT2G36970 27.147 361 196 12 1 332 1 323 1.53e-24 105
MS.gene37842.t1 AT5G65550 30.117 342 195 15 5 331 2 314 4.06e-24 104
MS.gene37842.t1 AT5G49690 27.778 342 205 14 1 331 1 311 1.94e-22 99.4
MS.gene37842.t1 AT1G05680 25.000 332 209 12 10 331 6 307 2.19e-20 93.2
MS.gene37842.t1 AT1G06000 28.698 338 174 15 1 331 1 278 3.58e-20 92.4
MS.gene37842.t1 AT3G46680 26.243 362 222 14 3 357 2 325 6.08e-20 91.7
MS.gene37842.t1 AT1G05675 24.465 327 217 10 10 331 6 307 1.46e-19 90.9
MS.gene37842.t1 AT2G15490 30.570 193 116 6 10 193 7 190 1.70e-19 88.2
MS.gene37842.t1 AT3G46690 25.474 369 219 13 1 357 1 325 7.01e-19 88.6
MS.gene37842.t1 AT2G28080 24.625 333 207 12 15 332 23 326 1.48e-18 87.8
MS.gene37842.t1 AT3G46670 25.641 351 187 12 6 332 2 302 4.97e-18 86.3
MS.gene37842.t1 AT5G66690 25.779 353 204 15 8 345 5 314 1.42e-17 84.7
MS.gene37842.t1 AT1G78270 24.047 341 232 10 4 331 7 333 2.06e-17 84.3
MS.gene37842.t1 AT2G31750 26.844 339 208 15 1 331 1 307 2.69e-17 84.0
MS.gene37842.t1 AT2G31750 26.844 339 208 15 1 331 1 307 5.28e-17 83.2
MS.gene37842.t1 AT3G46700 26.374 364 214 16 1 356 1 318 9.96e-17 82.0
MS.gene37842.t1 AT5G59580 24.779 339 197 11 8 332 7 301 4.54e-16 80.1
MS.gene37842.t1 AT1G01390 26.549 339 197 12 9 333 7 307 4.61e-16 80.1
MS.gene37842.t1 AT1G01390 26.549 339 197 12 9 333 24 324 4.66e-16 80.5
MS.gene37842.t1 AT2G43820 24.850 334 204 14 7 331 4 299 6.05e-16 79.7
MS.gene37842.t1 AT1G05530 25.915 328 205 14 8 330 3 297 6.18e-16 79.7
MS.gene37842.t1 AT5G26310 25.882 340 196 13 8 333 5 302 6.59e-16 79.7
MS.gene37842.t1 AT5G38040 24.096 332 190 11 18 332 18 304 8.01e-16 79.3
MS.gene37842.t1 AT4G01070 25.876 371 187 14 7 342 5 322 2.03e-15 77.4
MS.gene37842.t1 AT3G55700 24.398 332 213 7 7 332 5 304 2.26e-15 78.2
MS.gene37842.t1 AT3G50740 26.286 350 187 15 8 333 5 307 2.44e-15 78.2
MS.gene37842.t1 AT4G01070 25.876 371 187 14 7 342 5 322 2.69e-15 77.8
MS.gene37842.t1 AT3G46660 25.141 354 187 13 6 332 7 309 3.43e-15 77.4
MS.gene37842.t1 AT3G46650 23.967 363 212 11 1 356 1 306 3.90e-15 77.4
MS.gene37842.t1 AT3G11340 26.031 388 204 18 3 370 2 326 4.27e-15 77.0
MS.gene37842.t1 AT3G46720 25.074 339 209 13 1 332 1 301 5.70e-15 76.6
MS.gene37842.t1 AT1G01420 24.854 342 203 12 9 335 7 309 8.73e-15 76.3
MS.gene37842.t1 AT1G01420 24.854 342 203 12 9 335 10 312 9.71e-15 76.3
MS.gene37842.t1 AT5G38010 24.719 356 196 12 1 332 1 308 1.29e-14 75.9
MS.gene37842.t1 AT5G05880 26.269 335 193 15 10 331 8 301 1.39e-14 75.5
MS.gene37842.t1 AT5G05860 24.595 370 220 14 10 363 9 335 1.45e-14 75.5
MS.gene37842.t1 AT2G30150 23.653 334 204 9 10 331 13 307 1.60e-14 75.5
MS.gene37842.t1 AT5G59590 24.207 347 204 13 1 332 1 303 1.88e-14 75.1
MS.gene37842.t1 AT1G05560 24.478 335 213 12 2 330 44 344 3.69e-14 74.7
MS.gene37842.t1 AT2G23260 24.928 349 203 15 1 332 1 307 4.24e-14 74.3
MS.gene37842.t1 AT1G05560 24.308 325 209 11 9 330 4 294 5.66e-14 73.9
MS.gene37842.t1 AT5G05900 24.706 340 198 13 10 331 8 307 9.98e-14 73.2
MS.gene37842.t1 AT5G54010 26.946 334 199 15 8 335 4 298 1.02e-13 72.8
MS.gene37842.t1 AT5G05890 24.339 378 218 12 10 370 8 334 1.53e-13 72.4
MS.gene37842.t1 AT2G43840 23.392 342 197 11 8 331 5 299 3.35e-13 71.2
MS.gene37842.t1 AT2G29730 24.556 338 215 12 7 331 2 312 3.42e-13 71.2
MS.gene37842.t1 AT2G43840 23.392 342 197 11 8 331 5 299 3.60e-13 71.2
MS.gene37842.t1 AT2G30150 23.404 329 201 9 15 331 2 291 9.43e-13 70.1
MS.gene37842.t1 AT4G36770 22.222 351 204 12 11 340 7 309 7.21e-12 67.4
MS.gene37842.t1 AT1G22370 27.632 152 104 3 183 332 13 160 1.74e-11 65.1
MS.gene37842.t1 AT1G07250 24.148 352 205 18 7 331 3 319 2.71e-11 65.5
MS.gene37842.t1 AT3G16520 32.432 111 65 2 224 333 208 309 5.93e-11 64.3
MS.gene37842.t1 AT2G18560 35.484 124 58 4 218 333 107 216 6.12e-11 63.9
MS.gene37842.t1 AT3G16520 32.432 111 65 2 224 333 208 309 6.44e-11 64.3
MS.gene37842.t1 AT3G16520 32.432 111 65 2 224 333 208 309 6.84e-11 64.3
MS.gene37842.t1 AT2G29710 24.779 339 212 14 7 331 2 311 9.11e-11 63.9

Find 81 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTCCTGTTTGGTGTAT+TGG 0.188665 5.3:+70405252 MS.gene37842:CDS
CTTTGGCTTATATATCTATT+TGG 0.189676 5.3:+70404909 MS.gene37842:CDS
TCTACCATCAACTACATTAA+AGG 0.192954 5.3:+70405281 MS.gene37842:CDS
AAACAGATTCTGATGAGTTT+TGG 0.215909 5.3:+70404951 MS.gene37842:CDS
TTCACTACTTGTGGTGCTTA+TGG 0.229278 5.3:+70404884 MS.gene37842:CDS
TGTTGGAAATTGCAGATTTA+AGG 0.236311 5.3:-70404580 None:intergenic
TTGAGGAGATTGAGACTTTA+GGG 0.249682 5.3:+70405205 MS.gene37842:CDS
TGAACCTTATATTTGCAAAA+TGG 0.269186 5.3:-70405982 None:intergenic
CCTTTCAATCATAGCCAATA+TGG 0.288520 5.3:+70404650 MS.gene37842:CDS
TCTGTTCTTTACATTTCTTT+TGG 0.294107 5.3:+70405390 MS.gene37842:CDS
ACATCTGATATAATACAAAT+TGG 0.302473 5.3:-70404806 None:intergenic
GTTGAGGAGATTGAGACTTT+AGG 0.314171 5.3:+70405204 MS.gene37842:CDS
TTCTCTGTGTTCTCTATGTT+TGG 0.322059 5.3:-70404680 None:intergenic
GAACCCTTTAATGTAGTTGA+TGG 0.356287 5.3:-70405285 None:intergenic
CTACCATCAACTACATTAAA+GGG 0.356356 5.3:+70405282 MS.gene37842:CDS
ACTATCTTCAACTTCCTGTT+TGG 0.396628 5.3:+70405244 MS.gene37842:CDS
ACCAATGTTGCAAAGAGTTT+AGG 0.398649 5.3:+70404845 MS.gene37842:CDS
TGTTTGGTGGTAAACCATAT+TGG 0.402848 5.3:-70404664 None:intergenic
GATTGAGATATCATTGTTAG+AGG 0.404936 5.3:-70404612 None:intergenic
CATAGTGATGACACCATTCA+TGG 0.404967 5.3:+70404454 MS.gene37842:CDS
TGTGGAAAGTGTGATTTCTA+AGG 0.411976 5.3:+70405797 MS.gene37842:CDS
AATAGAGAAAGGTGAAGAAA+AGG 0.413934 5.3:+70405923 MS.gene37842:CDS
TTTAAGGTGTTGAATGTTGA+GGG 0.423162 5.3:-70404564 None:intergenic
TGGGTTATTAGGCCACCTTT+TGG 0.429078 5.3:+70405489 MS.gene37842:CDS
AGGAAAGGGAAAAGAGATGA+AGG 0.466069 5.3:+70405860 MS.gene37842:CDS
GCATTCTTTAAGTGCTATGC+CGG 0.468010 5.3:-70405337 None:intergenic
AAGAGCTAAGAGGAGTTTCA+AGG 0.471920 5.3:-70404748 None:intergenic
ATCAAAGATCACACAACAAG+AGG 0.472717 5.3:+70404775 MS.gene37842:CDS
AATAAGTGCTTCACAAATGA+TGG 0.472776 5.3:+70405425 MS.gene37842:CDS
TTCCTTGCTAAGGCTAGGAA+TGG 0.473036 5.3:-70404494 None:intergenic
TTGTGGTGCTTATGGAACTT+TGG 0.474827 5.3:+70404892 MS.gene37842:CDS
TCTGTGTTCTCTATGTTTGG+TGG 0.481332 5.3:-70404677 None:intergenic
GAAGGTCATAGAAATAGTTA+TGG 0.494649 5.3:+70405830 MS.gene37842:CDS
AGAGGACCAATACACCAAAC+AGG 0.496365 5.3:-70405258 None:intergenic
ATAGAGAAAGGTGAAGAAAA+GGG 0.497514 5.3:+70405924 MS.gene37842:CDS
TATCGTGCCGGAAAAGAATC+CGG 0.505155 5.3:+70405318 MS.gene37842:CDS
TTTCTATGAAATCTGATGGA+TGG 0.506070 5.3:+70405169 MS.gene37842:CDS
GCACTTTCTATGAAATCTGA+TGG 0.507859 5.3:+70405165 MS.gene37842:CDS
GCCTAAACTCTTTGCAACAT+TGG 0.509297 5.3:-70404846 None:intergenic
CAAATGATGGCATTGGCTGA+AGG 0.509427 5.3:+70405438 MS.gene37842:CDS
TTTGATATTAAAGAGCTAAG+AGG 0.511656 5.3:-70404758 None:intergenic
CCATATTGGCTATGATTGAA+AGG 0.514637 5.3:-70404650 None:intergenic
TTGAATGTTGAGGGGAGTGG+TGG 0.516196 5.3:-70404555 None:intergenic
TTGCAAAGAGTTTAGGCACT+AGG 0.517139 5.3:+70404852 MS.gene37842:CDS
GATGGCATTGGCTGAAGGGT+TGG 0.527119 5.3:+70405443 MS.gene37842:CDS
GTGTTGAATGTTGAGGGGAG+TGG 0.528271 5.3:-70404558 None:intergenic
GCATTAATGTCAAAACCAAA+AGG 0.529138 5.3:-70405504 None:intergenic
AGTTATGGATCAAGAAGGAA+AGG 0.531800 5.3:+70405845 MS.gene37842:CDS
CAGCTGATGGAACTGATAGT+TGG 0.533405 5.3:+70405118 MS.gene37842:CDS
AGAGAGGCAACAATAGAGAA+AGG 0.537343 5.3:+70405912 MS.gene37842:CDS
TTCTAAGGAAGATGTGAAGA+AGG 0.540427 5.3:+70405812 MS.gene37842:CDS
GGGCTCTTCATTGAGAGCAA+TGG 0.546445 5.3:+70405944 MS.gene37842:CDS
GTTAGAGGAAGAAAATGTGT+TGG 0.552708 5.3:-70404597 None:intergenic
ATTTAAGGTGTTGAATGTTG+AGG 0.556478 5.3:-70404565 None:intergenic
TTCCATTCCTAGCCTTAGCA+AGG 0.563221 5.3:+70404492 MS.gene37842:CDS
AATGTAGTTGATGGTAGAAG+AGG 0.565238 5.3:-70405276 None:intergenic
ATAGAAAGTGCTATCTGTGG+AGG 0.568920 5.3:-70405153 None:intergenic
AATATATCATTCACTACTTG+TGG 0.569451 5.3:+70404875 MS.gene37842:CDS
TCTGATATAATACAAATTGG+AGG 0.576021 5.3:-70404803 None:intergenic
CATAGCACTTAAAGAATGCA+TGG 0.580454 5.3:+70405341 MS.gene37842:CDS
AAATATCTAAGAGCAGCTGA+TGG 0.581110 5.3:+70405105 MS.gene37842:CDS
GAAATAGTTATGGATCAAGA+AGG 0.581158 5.3:+70405840 MS.gene37842:CDS
AAATGATGGCATTGGCTGAA+GGG 0.582808 5.3:+70405439 MS.gene37842:CDS
TTAAGGTGTTGAATGTTGAG+GGG 0.591201 5.3:-70404563 None:intergenic
TGCTTCACAAATGATGGCAT+TGG 0.592228 5.3:+70405431 MS.gene37842:CDS
AGATGACCATGTGCCATGAA+TGG 0.594468 5.3:-70404467 None:intergenic
GTTATGGATCAAGAAGGAAA+GGG 0.601148 5.3:+70405846 MS.gene37842:CDS
TCGAATTCAAAGTATCGTGC+CGG 0.602751 5.3:+70405306 MS.gene37842:CDS
AGTTTGATTATATCAGCTAG+AGG 0.618867 5.3:-70404707 None:intergenic
TCAAAGATCACACAACAAGA+GGG 0.619274 5.3:+70404776 MS.gene37842:CDS
ATTTATGCATCTGAGAGATG+TGG 0.619288 5.3:-70405086 None:intergenic
ATGGATTTGCAACACTGTTG+AGG 0.621241 5.3:+70405188 MS.gene37842:CDS
TAGAAAGTGCTATCTGTGGA+GGG 0.628315 5.3:-70405152 None:intergenic
TTCATAGAAAGTGCTATCTG+TGG 0.629318 5.3:-70405156 None:intergenic
CACTTAAAGAATGCATGGAG+TGG 0.630798 5.3:+70405346 MS.gene37842:CDS
GATTGAAAGGTAATTCAGCA+AGG 0.631413 5.3:-70404637 None:intergenic
ATGACACCATTCATGGCACA+TGG 0.659660 5.3:+70404461 MS.gene37842:CDS
TTAATGTCAAAACCAAAAGG+TGG 0.668183 5.3:-70405501 None:intergenic
AATGGTGTCATCACTATGTG+TGG 0.687624 5.3:-70404449 None:intergenic
GATTGCAGTACACATGAGAG+AGG 0.690334 5.3:+70405896 MS.gene37842:CDS
TGTGGAATTGACAAGAACTG+TGG 0.715420 5.3:+70405779 MS.gene37842:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTTTATATATGATACTA+GGG + chr5.3:70405043-70405062 MS.gene37842:intron 15.0%
!! ACATCTGATATAATACAAAT+TGG - chr5.3:70404809-70404828 None:intergenic 20.0%
!! CTAACTTTATATATGATACT+AGG + chr5.3:70405042-70405061 MS.gene37842:intron 20.0%
!!! AGTTAGTTAGATTTTTCTTT+TGG - chr5.3:70405028-70405047 None:intergenic 20.0%
!!! ATTATATCAGATGTTTTTCT+TGG + chr5.3:70404815-70404834 MS.gene37842:CDS 20.0%
! AATATATCATTCACTACTTG+TGG + chr5.3:70404875-70404894 MS.gene37842:CDS 25.0%
! AGAATAAAGCATAGTAAAAG+GGG + chr5.3:70405567-70405586 MS.gene37842:intron 25.0%
! AGAGAATAAAGCATAGTAAA+AGG + chr5.3:70405565-70405584 MS.gene37842:intron 25.0%
! GAGAATAAAGCATAGTAAAA+GGG + chr5.3:70405566-70405585 MS.gene37842:intron 25.0%
! TCTGATATAATACAAATTGG+AGG - chr5.3:70404806-70404825 None:intergenic 25.0%
! TTTGATATTAAAGAGCTAAG+AGG - chr5.3:70404761-70404780 None:intergenic 25.0%
!! AAAGTGAGAAACTTTTCATT+TGG + chr5.3:70405469-70405488 MS.gene37842:CDS 25.0%
!! AAGTGAGAAACTTTTCATTT+GGG + chr5.3:70405470-70405489 MS.gene37842:CDS 25.0%
!! CTTTGGCTTATATATCTATT+TGG + chr5.3:70404909-70404928 MS.gene37842:CDS 25.0%
!! TCTGTTCTTTACATTTCTTT+TGG + chr5.3:70405390-70405409 MS.gene37842:CDS 25.0%
!!! AACTTTTCATTTGGGTTATT+AGG + chr5.3:70405478-70405497 MS.gene37842:CDS 25.0%
AATAAGTGCTTCACAAATGA+TGG + chr5.3:70405425-70405444 MS.gene37842:CDS 30.0%
AATAGAGAAAGGTGAAGAAA+AGG + chr5.3:70405923-70405942 MS.gene37842:CDS 30.0%
AGTTTGATTATATCAGCTAG+AGG - chr5.3:70404710-70404729 None:intergenic 30.0%
ATAGAGAAAGGTGAAGAAAA+GGG + chr5.3:70405924-70405943 MS.gene37842:CDS 30.0%
CTACCATCAACTACATTAAA+GGG + chr5.3:70405282-70405301 MS.gene37842:CDS 30.0%
GAAATAGTTATGGATCAAGA+AGG + chr5.3:70405840-70405859 MS.gene37842:CDS 30.0%
GAAGGTCATAGAAATAGTTA+TGG + chr5.3:70405830-70405849 MS.gene37842:CDS 30.0%
GATTGAGATATCATTGTTAG+AGG - chr5.3:70404615-70404634 None:intergenic 30.0%
GCATTAATGTCAAAACCAAA+AGG - chr5.3:70405507-70405526 None:intergenic 30.0%
TCTACCATCAACTACATTAA+AGG + chr5.3:70405281-70405300 MS.gene37842:CDS 30.0%
TGTTGGAAATTGCAGATTTA+AGG - chr5.3:70404583-70404602 None:intergenic 30.0%
TTAATGTCAAAACCAAAAGG+TGG - chr5.3:70405504-70405523 None:intergenic 30.0%
TTTCTATGAAATCTGATGGA+TGG + chr5.3:70405169-70405188 MS.gene37842:CDS 30.0%
! AAACAGATTCTGATGAGTTT+TGG + chr5.3:70404951-70404970 MS.gene37842:CDS 30.0%
! AACAGATTCTGATGAGTTTT+GGG + chr5.3:70404952-70404971 MS.gene37842:CDS 30.0%
! ATCAGATGTTTTTCTTGGTT+GGG + chr5.3:70404820-70404839 MS.gene37842:CDS 30.0%
! TATCAGATGTTTTTCTTGGT+TGG + chr5.3:70404819-70404838 MS.gene37842:CDS 30.0%
! TTCTTGAATTTTCCTTGCTA+AGG - chr5.3:70404507-70404526 None:intergenic 30.0%
!! ATTTAAGGTGTTGAATGTTG+AGG - chr5.3:70404568-70404587 None:intergenic 30.0%
!! TTTAAGGTGTTGAATGTTGA+GGG - chr5.3:70404567-70404586 None:intergenic 30.0%
!!! TGAGATATTTTAGTAGTACC+TGG - chr5.3:70404980-70404999 None:intergenic 30.0%
AAATATCTAAGAGCAGCTGA+TGG + chr5.3:70405105-70405124 MS.gene37842:CDS 35.0%
ACCAATGTTGCAAAGAGTTT+AGG + chr5.3:70404845-70404864 MS.gene37842:CDS 35.0%
ACTATCTTCAACTTCCTGTT+TGG + chr5.3:70405244-70405263 MS.gene37842:CDS 35.0%
AGCATACAATGCAAAGATGT+TGG + chr5.3:70405737-70405756 MS.gene37842:intron 35.0%
AGTTATGGATCAAGAAGGAA+AGG + chr5.3:70405845-70405864 MS.gene37842:CDS 35.0%
ATACAATGCAAAGATGTTGG+TGG + chr5.3:70405740-70405759 MS.gene37842:intron 35.0%
ATCAAAGATCACACAACAAG+AGG + chr5.3:70404775-70404794 MS.gene37842:CDS 35.0%
ATTCTGTCACACAAATCAAC+AGG + chr5.3:70405624-70405643 MS.gene37842:intron 35.0%
ATTTATGCATCTGAGAGATG+TGG - chr5.3:70405089-70405108 None:intergenic 35.0%
CATAGCACTTAAAGAATGCA+TGG + chr5.3:70405341-70405360 MS.gene37842:CDS 35.0%
CCTTTCAATCATAGCCAATA+TGG + chr5.3:70404650-70404669 MS.gene37842:CDS 35.0%
GAACCCTTTAATGTAGTTGA+TGG - chr5.3:70405288-70405307 None:intergenic 35.0%
GAGCATTTCTAAGTCATTGT+GGG + chr5.3:70405646-70405665 MS.gene37842:intron 35.0%
GATTGAAAGGTAATTCAGCA+AGG - chr5.3:70404640-70404659 None:intergenic 35.0%
GCACTTTCTATGAAATCTGA+TGG + chr5.3:70405165-70405184 MS.gene37842:CDS 35.0%
GTTAGAGGAAGAAAATGTGT+TGG - chr5.3:70404600-70404619 None:intergenic 35.0%
GTTATGGATCAAGAAGGAAA+GGG + chr5.3:70405846-70405865 MS.gene37842:CDS 35.0%
TCAAAGATCACACAACAAGA+GGG + chr5.3:70404776-70404795 MS.gene37842:CDS 35.0%
TTCTCTGTGTTCTCTATGTT+TGG - chr5.3:70404683-70404702 None:intergenic 35.0%
TTGAGGAGATTGAGACTTTA+GGG + chr5.3:70405205-70405224 MS.gene37842:CDS 35.0%
! AAAGATGTTGGTGGAAGAAA+TGG + chr5.3:70405749-70405768 MS.gene37842:intron 35.0%
! AAGATGTTGGTGGAAGAAAT+GGG + chr5.3:70405750-70405769 MS.gene37842:intron 35.0%
! CCATATTGGCTATGATTGAA+AGG - chr5.3:70404653-70404672 None:intergenic 35.0%
! TGTGGAAAGTGTGATTTCTA+AGG + chr5.3:70405797-70405816 MS.gene37842:CDS 35.0%
! TGTTTGGTGGTAAACCATAT+TGG - chr5.3:70404667-70404686 None:intergenic 35.0%
! TTCTAAGGAAGATGTGAAGA+AGG + chr5.3:70405812-70405831 MS.gene37842:CDS 35.0%
!! AATGTAGTTGATGGTAGAAG+AGG - chr5.3:70405279-70405298 None:intergenic 35.0%
!! ATGTGGAATCTGTAGTTTTG+AGG - chr5.3:70405072-70405091 None:intergenic 35.0%
!! TCAGAATCTGTTTTTCGATG+AGG - chr5.3:70404944-70404963 None:intergenic 35.0%
!! TTAAGGTGTTGAATGTTGAG+GGG - chr5.3:70404566-70404585 None:intergenic 35.0%
!! TTCATAGAAAGTGCTATCTG+TGG - chr5.3:70405159-70405178 None:intergenic 35.0%
!!! TGTGGAATCTGTAGTTTTGA+GGG - chr5.3:70405071-70405090 None:intergenic 35.0%
AAGAGCTAAGAGGAGTTTCA+AGG - chr5.3:70404751-70404770 None:intergenic 40.0%
AGAGAGGCAACAATAGAGAA+AGG + chr5.3:70405912-70405931 MS.gene37842:CDS 40.0%
AGGAAAGGGAAAAGAGATGA+AGG + chr5.3:70405860-70405879 MS.gene37842:CDS 40.0%
ATGCAGAGTTCAAAGCAGAA+TGG + chr5.3:70405523-70405542 MS.gene37842:intron 40.0%
ATGGATTTGCAACACTGTTG+AGG + chr5.3:70405188-70405207 MS.gene37842:CDS 40.0%
ATTCTCTCTTCAAATCCCTC+TGG - chr5.3:70405552-70405571 None:intergenic 40.0%
CACTTAAAGAATGCATGGAG+TGG + chr5.3:70405346-70405365 MS.gene37842:CDS 40.0%
CATAGTGATGACACCATTCA+TGG + chr5.3:70404454-70404473 MS.gene37842:CDS 40.0%
CATTTCTAAGTCATTGTGGG+TGG + chr5.3:70405649-70405668 MS.gene37842:intron 40.0%
GCATAGTAAAAGGGGTTTGT+TGG + chr5.3:70405575-70405594 MS.gene37842:intron 40.0%
GCATTCTTTAAGTGCTATGC+CGG - chr5.3:70405340-70405359 None:intergenic 40.0%
GCCTAAACTCTTTGCAACAT+TGG - chr5.3:70404849-70404868 None:intergenic 40.0%
GTTGAGGAGATTGAGACTTT+AGG + chr5.3:70405204-70405223 MS.gene37842:CDS 40.0%
TCTGTGTTCTCTATGTTTGG+TGG - chr5.3:70404680-70404699 None:intergenic 40.0%
TGCTTCACAAATGATGGCAT+TGG + chr5.3:70405431-70405450 MS.gene37842:CDS 40.0%
TGTGACAGAATCTCTAACTG+AGG - chr5.3:70405615-70405634 None:intergenic 40.0%
TGTGGAATTGACAAGAACTG+TGG + chr5.3:70405779-70405798 MS.gene37842:intron 40.0%
TTCACTACTTGTGGTGCTTA+TGG + chr5.3:70404884-70404903 MS.gene37842:CDS 40.0%
TTGCAAAGAGTTTAGGCACT+AGG + chr5.3:70404852-70404871 MS.gene37842:CDS 40.0%
TTGTGGTGCTTATGGAACTT+TGG + chr5.3:70404892-70404911 MS.gene37842:CDS 40.0%
! AGATGTTGGTGGAAGAAATG+GGG + chr5.3:70405751-70405770 MS.gene37842:intron 40.0%
! GAATTTTCCTTGCTAAGGCT+AGG - chr5.3:70404502-70404521 None:intergenic 40.0%
! GGAGCATTTCTAAGTCATTG+TGG + chr5.3:70405645-70405664 MS.gene37842:intron 40.0%
! GGTGGCTATTGTGATTTTGA+AGG - chr5.3:70404540-70404559 None:intergenic 40.0%
! TTGTGGGTGGAATTCTGTTT+TGG + chr5.3:70405662-70405681 MS.gene37842:intron 40.0%
!! AAATGATGGCATTGGCTGAA+GGG + chr5.3:70405439-70405458 MS.gene37842:CDS 40.0%
!! AATGGTGTCATCACTATGTG+TGG - chr5.3:70404452-70404471 None:intergenic 40.0%
!! ATAGAAAGTGCTATCTGTGG+AGG - chr5.3:70405156-70405175 None:intergenic 40.0%
!! CAACTTCCTGTTTGGTGTAT+TGG + chr5.3:70405252-70405271 MS.gene37842:CDS 40.0%
!! GGGTTTGTTGGTGCATAAAT+GGG + chr5.3:70405587-70405606 MS.gene37842:intron 40.0%
!! GGTTTGTTGGTGCATAAATG+GGG + chr5.3:70405588-70405607 MS.gene37842:intron 40.0%
!! TAGAAAGTGCTATCTGTGGA+GGG - chr5.3:70405155-70405174 None:intergenic 40.0%
!! TCGAATTCAAAGTATCGTGC+CGG + chr5.3:70405306-70405325 MS.gene37842:CDS 40.0%
!! TTTTGGAGAGTCTTAGCCAA+GGG + chr5.3:70405679-70405698 MS.gene37842:intron 40.0%
AAAGCAGAATGGTTGCCAGA+GGG + chr5.3:70405534-70405553 MS.gene37842:intron 45.0%
AACCAATAATTGGCACCCCT+TGG - chr5.3:70405698-70405717 None:intergenic 45.0%
AGAGGACCAATACACCAAAC+AGG - chr5.3:70405261-70405280 None:intergenic 45.0%
AGATGACCATGTGCCATGAA+TGG - chr5.3:70404470-70404489 None:intergenic 45.0%
ATGACACCATTCATGGCACA+TGG + chr5.3:70404461-70404480 MS.gene37842:CDS 45.0%
CAGCTGATGGAACTGATAGT+TGG + chr5.3:70405118-70405137 MS.gene37842:CDS 45.0%
GATTGCAGTACACATGAGAG+AGG + chr5.3:70405896-70405915 MS.gene37842:CDS 45.0%
GCAAGTGGCCAACCAATAAT+TGG - chr5.3:70405708-70405727 None:intergenic 45.0%
TATCGTGCCGGAAAAGAATC+CGG + chr5.3:70405318-70405337 MS.gene37842:CDS 45.0%
TTCCTTGCTAAGGCTAGGAA+TGG - chr5.3:70404497-70404516 None:intergenic 45.0%
TTTGGAGAGTCTTAGCCAAG+GGG + chr5.3:70405680-70405699 MS.gene37842:intron 45.0%
! GATGTTGGTGGAAGAAATGG+GGG + chr5.3:70405752-70405771 MS.gene37842:intron 45.0%
! TGCTATGCCGGATTCTTTTC+CGG - chr5.3:70405328-70405347 None:intergenic 45.0%
! TGGGTTATTAGGCCACCTTT+TGG + chr5.3:70405489-70405508 MS.gene37842:CDS 45.0%
!! AAGGGGTGCCAATTATTGGT+TGG + chr5.3:70405697-70405716 MS.gene37842:intron 45.0%
!! CAAATGATGGCATTGGCTGA+AGG + chr5.3:70405438-70405457 MS.gene37842:CDS 45.0%
!! GGGGTTTGTTGGTGCATAAA+TGG + chr5.3:70405586-70405605 MS.gene37842:intron 45.0%
!! TTCCATTCCTAGCCTTAGCA+AGG + chr5.3:70404492-70404511 MS.gene37842:CDS 45.0%
!!! GTTTTGGAGAGTCTTAGCCA+AGG + chr5.3:70405678-70405697 MS.gene37842:intron 45.0%
!!! TCTGATGAGTTTTGGGTTCC+AGG + chr5.3:70404959-70404978 MS.gene37842:CDS 45.0%
CAAAGCAGAATGGTTGCCAG+AGG + chr5.3:70405533-70405552 MS.gene37842:intron 50.0%
GGGCTCTTCATTGAGAGCAA+TGG + chr5.3:70405944-70405963 MS.gene37842:CDS 50.0%
GTGTTGAATGTTGAGGGGAG+TGG - chr5.3:70404561-70404580 None:intergenic 50.0%
TATGCTTGCTCTGCTGCAAG+TGG - chr5.3:70405723-70405742 None:intergenic 50.0%
TTGAATGTTGAGGGGAGTGG+TGG - chr5.3:70404558-70404577 None:intergenic 50.0%
!! AGCCAAGGGGTGCCAATTAT+TGG + chr5.3:70405693-70405712 MS.gene37842:intron 50.0%
GGAAGAAATGGGGGTGAGTG+TGG + chr5.3:70405761-70405780 MS.gene37842:intron 55.0%
!! GATGGCATTGGCTGAAGGGT+TGG + chr5.3:70405443-70405462 MS.gene37842:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 70404425 70405998 70404425 ID=MS.gene37842
chr5.3 mRNA 70404425 70405998 70404425 ID=MS.gene37842.t1;Parent=MS.gene37842
chr5.3 exon 70404425 70404980 70404425 ID=MS.gene37842.t1.exon1;Parent=MS.gene37842.t1
chr5.3 CDS 70404425 70404980 70404425 ID=cds.MS.gene37842.t1;Parent=MS.gene37842.t1
chr5.3 exon 70405064 70405529 70405064 ID=MS.gene37842.t1.exon2;Parent=MS.gene37842.t1
chr5.3 CDS 70405064 70405529 70405064 ID=cds.MS.gene37842.t1;Parent=MS.gene37842.t1
chr5.3 exon 70405794 70405998 70405794 ID=MS.gene37842.t1.exon3;Parent=MS.gene37842.t1
chr5.3 CDS 70405794 70405998 70405794 ID=cds.MS.gene37842.t1;Parent=MS.gene37842.t1
Gene Sequence

>MS.gene37842

ATGTCAGAAACTGCAGAGAAGAAACCACACATAGTGATGACACCATTCATGGCACATGGTCATCTCATTCCATTCCTAGCCTTAGCAAGGAAAATTCAAGAAACAACTACTACCTTCAAAATCACAATAGCCACCACTCCCCTCAACATTCAACACCTTAAATCTGCAATTTCCAACACATTTTCTTCCTCTAACAATGATATCTCAATCAACCTTGCTGAATTACCTTTCAATCATAGCCAATATGGTTTACCACCAAACATAGAGAACACAGAGAAGCTTCCTCTAGCTGATATAATCAAACTCTTTCAAGCATCAACTAGCCTTGAAACTCCTCTTAGCTCTTTAATATCAAAGATCACACAACAAGAGGGTCAACCTCCAATTTGTATTATATCAGATGTTTTTCTTGGTTGGGTTACCAATGTTGCAAAGAGTTTAGGCACTAGGAATATATCATTCACTACTTGTGGTGCTTATGGAACTTTGGCTTATATATCTATTTGGACTAATCTACCTCATCGAAAAACAGATTCTGATGAGTTTTGGGTTCCAGGTACTACTAAAATATCTCATTTATTTATAATTTTTTTTTGTTCACCAAAAGAAAAATCTAACTAACTTTATATATGATACTAGGGTTCCCTCAAAACTACAGATTCCACATCTCTCAGATGCATAAATATCTAAGAGCAGCTGATGGAACTGATAGTTGGTCAAAATTCTTCCCTCCACAGATAGCACTTTCTATGAAATCTGATGGATGGATTTGCAACACTGTTGAGGAGATTGAGACTTTAGGGCTGCAACTATTGAAGAACTATCTTCAACTTCCTGTTTGGTGTATTGGTCCTCTTCTACCATCAACTACATTAAAGGGTTCGAATTCAAAGTATCGTGCCGGAAAAGAATCCGGCATAGCACTTAAAGAATGCATGGAGTGGCTTGATTTAAAAGATGAGAAATCTGTTCTTTACATTTCTTTTGGATCACAGAACACAATAAGTGCTTCACAAATGATGGCATTGGCTGAAGGGTTGGAAGAAAGTGAGAAACTTTTCATTTGGGTTATTAGGCCACCTTTTGGTTTTGACATTAATGCAGAGTTCAAAGCAGAATGGTTGCCAGAGGGATTTGAAGAGAGAATAAAGCATAGTAAAAGGGGTTTGTTGGTGCATAAATGGGGACCTCAGTTAGAGATTCTGTCACACAAATCAACAGGAGCATTTCTAAGTCATTGTGGGTGGAATTCTGTTTTGGAGAGTCTTAGCCAAGGGGTGCCAATTATTGGTTGGCCACTTGCAGCAGAGCAAGCATACAATGCAAAGATGTTGGTGGAAGAAATGGGGGTGAGTGTGGAATTGACAAGAACTGTGGAAAGTGTGATTTCTAAGGAAGATGTGAAGAAGGTCATAGAAATAGTTATGGATCAAGAAGGAAAGGGAAAAGAGATGAAGGAGAAAGCAAATGAGATTGCAGTACACATGAGAGAGGCAACAATAGAGAAAGGTGAAGAAAAGGGCTCTTCATTGAGAGCAATGGATGATTTTGTCAGAACCATTTTGCAAATATAA
Protein sequence

>MS.gene37842.t1

MSETAEKKPHIVMTPFMAHGHLIPFLALARKIQETTTTFKITIATTPLNIQHLKSAISNTFSSSNNDISINLAELPFNHSQYGLPPNIENTEKLPLADIIKLFQASTSLETPLSSLISKITQQEGQPPICIISDVFLGWVTNVAKSLGTRNISFTTCGAYGTLAYISIWTNLPHRKTDSDEFWVPGFPQNYRFHISQMHKYLRAADGTDSWSKFFPPQIALSMKSDGWICNTVEEIETLGLQLLKNYLQLPVWCIGPLLPSTTLKGSNSKYRAGKESGIALKECMEWLDLKDEKSVLYISFGSQNTISASQMMALAEGLEESEKLFIWVIRPPFGFDINAETVESVISKEDVKKVIEIVMDQEGKGKEMKEKANEIAVHMREATIEKGEEKGSSLRAMDDFVRTILQI