AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051863


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051863.t1 MTR_4g126160 98.319 476 8 0 1 476 43 518 0.0 967
MS.gene051863.t1 MTR_2g039340 68.116 483 143 3 2 475 41 521 0.0 699
MS.gene051863.t1 MTR_4g126150 60.744 484 175 4 2 476 49 526 0.0 616
MS.gene051863.t1 MTR_2g039410 58.468 496 184 6 2 476 44 538 0.0 583
MS.gene051863.t1 MTR_3g112350 50.932 483 223 7 2 476 47 523 1.92e-168 485
MS.gene051863.t1 MTR_3g036100 47.216 485 232 8 2 476 71 541 1.08e-153 448
MS.gene051863.t1 MTR_4g044110 47.023 487 233 10 2 475 47 521 3.55e-150 439
MS.gene051863.t1 MTR_7g090920 45.474 475 237 7 12 475 73 536 1.04e-146 430
MS.gene051863.t1 MTR_1g015410 42.355 484 248 13 10 476 35 504 1.58e-122 367
MS.gene051863.t1 MTR_0005s0070 49.091 275 122 7 25 291 1 265 5.83e-79 247
MS.gene051863.t1 MTR_2g039360 43.678 87 48 1 391 476 77 163 7.39e-19 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051863.t1 AT5G56970 53.191 470 210 3 9 475 55 517 0.0 524
MS.gene051863.t1 AT4G29740 50.823 486 219 4 5 476 45 524 9.40e-179 511
MS.gene051863.t1 AT2G19500 49.687 479 224 4 2 475 35 501 1.28e-172 495
MS.gene051863.t1 AT1G75450 49.064 481 226 8 6 475 48 520 1.40e-163 473
MS.gene051863.t1 AT1G75450 48.861 483 227 9 6 476 44 518 1.20e-161 468
MS.gene051863.t1 AT3G63440 47.589 477 229 8 12 476 60 527 3.36e-151 441
MS.gene051863.t1 AT2G41510 46.331 477 228 9 13 475 77 539 1.58e-147 434
MS.gene051863.t1 AT2G41510 46.234 478 229 9 12 475 138 601 8.90e-147 434
MS.gene051863.t1 AT4G29740 52.564 390 166 3 5 381 45 428 2.83e-143 417
MS.gene051863.t1 AT5G56970 54.424 373 160 3 12 381 58 423 1.09e-141 413
MS.gene051863.t1 AT5G21482 44.124 485 240 12 11 476 49 521 2.99e-128 382
MS.gene051863.t1 AT2G41510 47.230 379 177 8 12 381 76 440 6.41e-114 343
MS.gene051863.t1 AT4G29740 52.769 307 126 3 5 298 45 345 3.19e-107 323

Find 106 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAACTGGGTTTGATAATT+TGG 0.172846 8.2:+6420488 MS.gene051863:CDS
ATTCTTCATGTGTTCTGTTT+AGG 0.174158 8.2:-6420587 None:intergenic
TCACTAGCCTCAACCGATTT+TGG 0.182190 8.2:+6414928 MS.gene051863:CDS
CCTCTTGCTGCTATAGTAAA+AGG 0.182887 8.2:-6415045 None:intergenic
AATAATGAGCTTAGAAATAA+TGG 0.225918 8.2:+6415135 MS.gene051863:CDS
CTTGGAGGTCTAGGCCAATT+TGG 0.234892 8.2:+6419179 MS.gene051863:CDS
ATGCGAGGTTGATCAATTTC+TGG 0.237168 8.2:-6419824 None:intergenic
TTCTTCATGTGTTCTGTTTA+GGG 0.237319 8.2:-6420586 None:intergenic
AAGGACTTACACCACTTTCT+TGG 0.249326 8.2:+6415241 MS.gene051863:CDS
TCAATGAGATTAAATGTTCT+TGG 0.259196 8.2:-6419718 None:intergenic
TGATGTAGATTATGCCATAT+TGG 0.273247 8.2:-6419862 None:intergenic
GAACATGTTACTTACCCTTT+TGG 0.283606 8.2:-6419240 None:intergenic
GGGCAAGGGCATTCAGTTAA+TGG 0.292683 8.2:+6415066 MS.gene051863:CDS
ACTTACTTTGTTCGGTTCAT+TGG 0.299489 8.2:-6420328 None:intergenic
TTGGAGGTCTAGGCCAATTT+GGG 0.311083 8.2:+6419180 MS.gene051863:CDS
CATGAATTGGATGTTGTTAC+TGG 0.312954 8.2:+6415357 MS.gene051863:CDS
AATTTCCAATGTTCATGAAT+TGG 0.316418 8.2:+6415344 MS.gene051863:CDS
CCCGGGTTATAATCCCAAAT+TGG 0.317668 8.2:-6419193 None:intergenic
TGGTTAGACCTATTTGTTCC+AGG 0.317776 8.2:+6420220 MS.gene051863:CDS
ACGTAGAAAATTTCTTCATT+AGG 0.319059 8.2:-6420450 None:intergenic
CACTAAGGGCACAAGGGCTT+TGG 0.322463 8.2:+6420182 MS.gene051863:CDS
GACTGATTATTTGTATTTAT+CGG 0.326686 8.2:+6415263 MS.gene051863:CDS
GATGTAGATTATGCCATATT+GGG 0.334379 8.2:-6419861 None:intergenic
ACTTCCTTGGTAACCCAATA+TGG 0.343635 8.2:+6419848 MS.gene051863:CDS
CTCTCTAATGCCGGTATTAG+TGG 0.344259 8.2:+6415297 MS.gene051863:CDS
AATGCACCTAATTATGTAGA+AGG 0.361571 8.2:+6419758 MS.gene051863:CDS
TACAGAATTGCAATATTTGT+TGG 0.363574 8.2:-6420530 None:intergenic
TCTCAAAAGTATTCCATTTG+AGG 0.386197 8.2:-6420626 None:intergenic
AGTGGACAAAGCTTCCGATT+TGG 0.397065 8.2:+6415315 MS.gene051863:CDS
GAAGAATGGGTGGAACAATA+TGG 0.397648 8.2:+6420603 MS.gene051863:CDS
CTTACTTTGTTCGGTTCATT+GGG 0.402378 8.2:-6420327 None:intergenic
CTCTCAAGATCATGTTGATC+AGG 0.409029 8.2:+6419913 MS.gene051863:CDS
GAACATTTAATCTCATTGAA+TGG 0.419334 8.2:+6419722 MS.gene051863:CDS
TATGCGGTTCTTGGAGGTCT+AGG 0.420552 8.2:+6419170 MS.gene051863:CDS
ACTAAGGGCACAAGGGCTTT+GGG 0.426367 8.2:+6420183 MS.gene051863:CDS
TTGCATGCAAGCCTTGAAAA+AGG 0.427576 8.2:+6415222 MS.gene051863:CDS
GTGAATTATGTGGCCAAAAT+CGG 0.429011 8.2:-6414941 None:intergenic
TCATGAACATTGGAAATTTG+AGG 0.429894 8.2:-6415339 None:intergenic
GGACAATCCATGACAAATGA+TGG 0.430303 8.2:+6415087 MS.gene051863:CDS
CTCTTGGACCTGCACCCAAA+AGG 0.431378 8.2:+6419225 MS.gene051863:CDS
GGGAATGGAATTGTTGTGTT+TGG 0.431696 8.2:+6415156 MS.gene051863:CDS
GATATATCATTAATAGAAGA+TGG 0.437761 8.2:-6414988 None:intergenic
GTCCAAGAGCTATTCTTGCC+CGG 0.443689 8.2:-6419211 None:intergenic
ACAAATATTGCAATTCTGTA+AGG 0.447727 8.2:+6420533 MS.gene051863:CDS
TTTGGGATATCCCACATCCT+TGG 0.453084 8.2:+6420200 MS.gene051863:CDS
TGGAAATTTGAGGACCAAAT+CGG 0.455857 8.2:-6415329 None:intergenic
AATTCAGACATTCTAGATCC+TGG 0.456400 8.2:-6420238 None:intergenic
TGGAACAATATGGCCTCAAA+TGG 0.459939 8.2:+6420613 MS.gene051863:CDS
ATCGGTTGAGGCTAGTGAAA+TGG 0.462882 8.2:-6414923 None:intergenic
GATTATTTGTATTTATCGGT+TGG 0.468139 8.2:+6415267 MS.gene051863:CDS
TAAACAGAACACATGAAGAA+TGG 0.476873 8.2:+6420589 MS.gene051863:CDS
CCAAATAAAATATTGTCACC+TGG 0.478461 8.2:+6420669 MS.gene051863:CDS
AGAAGTCGTTGTAAAGTAAA+CGG 0.480233 8.2:-6419679 None:intergenic
ATTTAATGAAGGTGTGTTCA+AGG 0.481817 8.2:+6420258 MS.gene051863:CDS
TTCTAGATCCTGGAACAAAT+AGG 0.484678 8.2:-6420228 None:intergenic
TTAATTTCTTGTAGGTAAAG+TGG 0.485135 8.2:+6419654 MS.gene051863:intron
ATAATGAGCTTAGAAATAAT+GGG 0.488294 8.2:+6415136 MS.gene051863:CDS
GGTAAATATGTAGATGTTGG+TGG 0.491300 8.2:+6415177 MS.gene051863:CDS
TCAACCTCGCATAACTTCCT+TGG 0.491369 8.2:+6419835 MS.gene051863:CDS
TCTTGGACCTGCACCCAAAA+GGG 0.495846 8.2:+6419226 MS.gene051863:CDS
GAGCTTAGAAATAATGGGAA+TGG 0.498772 8.2:+6415141 MS.gene051863:CDS
AAACAGAACACATGAAGAAT+GGG 0.503138 8.2:+6420590 MS.gene051863:CDS
AATAGGTCTAACCAAGGATG+TGG 0.503374 8.2:-6420211 None:intergenic
CTCTTGCTGCTATAGTAAAA+GGG 0.503657 8.2:-6415044 None:intergenic
TATTTGTATTTATCGGTTGG+TGG 0.507411 8.2:+6415270 MS.gene051863:CDS
ACCCGGGCAAGAATAGCTCT+TGG 0.507789 8.2:+6419209 MS.gene051863:CDS
AACATCCAATTCATGAACAT+TGG 0.509585 8.2:-6415349 None:intergenic
CACAATCCCATCATTTGTCA+TGG 0.510884 8.2:-6415094 None:intergenic
GCCAATTTGGGATTATAACC+CGG 0.514228 8.2:+6419192 MS.gene051863:CDS
ACTATAGCAGCAAGAGGGCA+AGG 0.517048 8.2:+6415051 MS.gene051863:CDS
TCCAAGAGCTATTCTTGCCC+GGG 0.517850 8.2:-6419210 None:intergenic
AACTGGGTTTGATAATTTGG+AGG 0.517975 8.2:+6420491 MS.gene051863:CDS
AAAATATTGTCACCTGGGCA+AGG 0.519413 8.2:+6420675 MS.gene051863:CDS
CCAATTTGGGATTATAACCC+GGG 0.522205 8.2:+6419193 MS.gene051863:CDS
TTTCATAGGGAAAGGAGACT+TGG 0.523319 8.2:+6419112 MS.gene051863:intron
GAAGCTTTGTCCACTAATAC+CGG 0.529885 8.2:-6415307 None:intergenic
AAATAATCAGTCCAAGAAAG+TGG 0.540656 8.2:-6415252 None:intergenic
CAAATAAAATATTGTCACCT+GGG 0.545989 8.2:+6420670 MS.gene051863:CDS
TTTGGTAAATATGTAGATGT+TGG 0.551302 8.2:+6415174 MS.gene051863:CDS
TCTTCATGTGTTCTGTTTAG+GGG 0.551746 8.2:-6420585 None:intergenic
GAGGCTAGTGAAATGGTCAC+GGG 0.552141 8.2:-6414916 None:intergenic
AGAATGTCTGAATTTAATGA+AGG 0.553370 8.2:+6420247 MS.gene051863:CDS
CTTAAACAAAACATTACAGC+AGG 0.556213 8.2:+6420289 MS.gene051863:CDS
TTTAATGAAGGTGTGTTCAA+GGG 0.557994 8.2:+6420259 MS.gene051863:CDS
GCTGCTATAGTAAAAGGGAT+AGG 0.561618 8.2:-6415039 None:intergenic
GACAATCCATGACAAATGAT+GGG 0.567061 8.2:+6415088 MS.gene051863:CDS
TAGTTGAAAATCCCTTGCCC+AGG 0.572154 8.2:-6420687 None:intergenic
AAATATTGTCACCTGGGCAA+GGG 0.572624 8.2:+6420676 MS.gene051863:CDS
GGTGGAACTCTCTCTAATGC+CGG 0.573154 8.2:+6415288 MS.gene051863:CDS
TGAGGCTAGTGAAATGGTCA+CGG 0.586140 8.2:-6414917 None:intergenic
TACTGATGAGCTAACACTAA+GGG 0.595369 8.2:+6420168 MS.gene051863:CDS
TTGCAATTCTGTAAGGATGT+CGG 0.599370 8.2:+6420540 MS.gene051863:CDS
CAGAACACATGAAGAATGGG+TGG 0.600011 8.2:+6420593 MS.gene051863:CDS
AAATATGTAGATGTTGGTGG+TGG 0.607390 8.2:+6415180 MS.gene051863:CDS
ATACTGATGAGCTAACACTA+AGG 0.611848 8.2:+6420167 MS.gene051863:CDS
GAGCTAACACTAAGGGCACA+AGG 0.614915 8.2:+6420175 MS.gene051863:CDS
CTATAGCAGCAAGAGGGCAA+GGG 0.617692 8.2:+6415052 MS.gene051863:CDS
CATGACAAATGATGGGATTG+TGG 0.622617 8.2:+6415095 MS.gene051863:CDS
TATGCCATATTGGGTTACCA+AGG 0.624328 8.2:-6419852 None:intergenic
AGCTAACACTAAGGGCACAA+GGG 0.649584 8.2:+6420176 MS.gene051863:CDS
ATAGGTCTAACCAAGGATGT+GGG 0.663453 8.2:-6420210 None:intergenic
TATGTGGCCAAAATCGGTTG+AGG 0.666331 8.2:-6414935 None:intergenic
GGAACAAATAGGTCTAACCA+AGG 0.693806 8.2:-6420217 None:intergenic
GTTACCAAGGAAGTTATGCG+AGG 0.707702 8.2:-6419839 None:intergenic
AGGCTAGTGAAATGGTCACG+GGG 0.748023 8.2:-6414915 None:intergenic
ATGTTGGTGGTGGACAACGT+TGG 0.759382 8.2:+6415190 MS.gene051863:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAAAAATATTTTTTT+TGG - chr8.2:6417210-6417229 None:intergenic 0.0%
!! AAAAAAAACTGTTTAATAAT+AGG + chr8.2:6415977-6415996 MS.gene051863:intron 10.0%
!! AAAGAATTTACAAAAATTTA+AGG - chr8.2:6419403-6419422 None:intergenic 10.0%
!! ACTAAAATAAACTTAAAAAT+AGG - chr8.2:6417145-6417164 None:intergenic 10.0%
!! ATATTGTATTAATATTATAC+GGG + chr8.2:6416110-6416129 MS.gene051863:intron 10.0%
!! CATATTATATATAAAGTTTA+TGG + chr8.2:6418501-6418520 MS.gene051863:intron 10.0%
!! CTAAAATAAACTTAAAAATA+GGG - chr8.2:6417144-6417163 None:intergenic 10.0%
!! GAAAAATTGATATATTTATA+GGG - chr8.2:6417053-6417072 None:intergenic 10.0%
!!! AAAACTATATATTTTTTTCT+GGG - chr8.2:6415949-6415968 None:intergenic 10.0%
!!! AATTATAAGATGATTTTTTT+TGG + chr8.2:6417763-6417782 MS.gene051863:intron 10.0%
!!! ATGAGTTTTTATATTTTTTA+TGG - chr8.2:6417263-6417282 None:intergenic 10.0%
!!! ATTATAAGATGATTTTTTTT+GGG + chr8.2:6417764-6417783 MS.gene051863:intron 10.0%
!!! TAAAACTATATATTTTTTTC+TGG - chr8.2:6415950-6415969 None:intergenic 10.0%
!!! TCTATTCTATTTTTTTTTTA+GGG + chr8.2:6416134-6416153 MS.gene051863:intron 10.0%
!!! TTCTATTCTATTTTTTTTTT+AGG + chr8.2:6416133-6416152 MS.gene051863:intron 10.0%
!!! TTGTAAATTCTTTTATTATA+GGG + chr8.2:6419410-6419429 MS.gene051863:intron 10.0%
!!! TTTGTAAATTCTTTTATTAT+AGG + chr8.2:6419409-6419428 MS.gene051863:intron 10.0%
!! AATATATTTACTTATTCGTA+TGG + chr8.2:6419270-6419289 MS.gene051863:intron 15.0%
!! ATATACAAATTAAAATGTGA+TGG + chr8.2:6416570-6416589 MS.gene051863:intron 15.0%
!! CGAAAAATTGATATATTTAT+AGG - chr8.2:6417054-6417073 None:intergenic 15.0%
!! GTCAATAAAAATTTATGTAT+GGG + chr8.2:6416838-6416857 MS.gene051863:intron 15.0%
!! TATACTTTGAATTAATTCAT+AGG + chr8.2:6420400-6420419 MS.gene051863:intron 15.0%
!! TCAATAAAAATTTATGTATG+GGG + chr8.2:6416839-6416858 MS.gene051863:intron 15.0%
!! TGTCAATAAAAATTTATGTA+TGG + chr8.2:6416837-6416856 MS.gene051863:intron 15.0%
!!! AAACTATATATTTTTTTCTG+GGG - chr8.2:6415948-6415967 None:intergenic 15.0%
!!! AAATTTTGTTCTTTTTCTTT+AGG - chr8.2:6417580-6417599 None:intergenic 15.0%
!!! ACTCAAAATATTTTATCTAA+TGG + chr8.2:6418361-6418380 MS.gene051863:intron 15.0%
!!! AGATAAATAAGTAAAGTTTT+TGG - chr8.2:6418535-6418554 None:intergenic 15.0%
!!! AGTAATTTAATTTAGGATAA+AGG - chr8.2:6419616-6419635 None:intergenic 15.0%
!!! CACTATATTTTATATGTTTT+TGG - chr8.2:6417505-6417524 None:intergenic 15.0%
!!! GGGATTAATAATTATATTTT+TGG + chr8.2:6416860-6416879 MS.gene051863:intron 15.0%
!!! GTAATTTAATTTAGGATAAA+GGG - chr8.2:6419615-6419634 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+AGG - chr8.2:6417113-6417132 None:intergenic 15.0%
!!! TTAATACAATATTTTTCTGT+TGG + chr8.2:6416019-6416038 MS.gene051863:intron 15.0%
!!! TTTGTTTTATATTTTTCCTT+TGG + chr8.2:6419088-6419107 MS.gene051863:intron 15.0%
!! AAAAAACCTTCTACATAATT+AGG - chr8.2:6419767-6419786 None:intergenic 20.0%
!! AAAACTGTTTAATAATAGGA+TGG + chr8.2:6415981-6416000 MS.gene051863:intron 20.0%
!! AAGAATTTATTTAGCTATCT+TGG + chr8.2:6416751-6416770 MS.gene051863:intron 20.0%
!! AATAATGAGCTTAGAAATAA+TGG + chr8.2:6415135-6415154 MS.gene051863:CDS 20.0%
!! ATAATGAGCTTAGAAATAAT+GGG + chr8.2:6415136-6415155 MS.gene051863:CDS 20.0%
!! CAAATGTAGAAATAATGTAT+TGG - chr8.2:6419553-6419572 None:intergenic 20.0%
!! CAATAAAAATTTATGTATGG+GGG + chr8.2:6416840-6416859 MS.gene051863:intron 20.0%
!! CATCAACATAGAAAATATAT+TGG - chr8.2:6418662-6418681 None:intergenic 20.0%
!! GACTGATTATTTGTATTTAT+CGG + chr8.2:6415263-6415282 MS.gene051863:CDS 20.0%
!! GATATATCATTAATAGAAGA+TGG - chr8.2:6414991-6415010 None:intergenic 20.0%
!! TACATATGAGTTTACTTTAA+AGG + chr8.2:6417383-6417402 MS.gene051863:intron 20.0%
!! TACTATAACAATTAACAACA+AGG + chr8.2:6416681-6416700 MS.gene051863:intron 20.0%
!! TCTTTATAAAACCAGTTATA+AGG + chr8.2:6416165-6416184 MS.gene051863:intron 20.0%
!! TTAATAATAGGATGGATAAA+TGG + chr8.2:6415989-6416008 MS.gene051863:intron 20.0%
!! TTCAATCCAACAAATTAAAA+TGG + chr8.2:6417991-6418010 MS.gene051863:intron 20.0%
!! TTGTTTGATTAATTTCTTGT+AGG + chr8.2:6419646-6419665 MS.gene051863:intron 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr8.2:6417117-6417136 MS.gene051863:intron 20.0%
!!! AACTATATATTTTTTTCTGG+GGG - chr8.2:6415947-6415966 None:intergenic 20.0%
!!! AGAACAAAATTTGTTCTTAA+AGG + chr8.2:6417588-6417607 MS.gene051863:intron 20.0%
!!! ATTTTATGTGTGAATATAAG+TGG + chr8.2:6416279-6416298 MS.gene051863:intron 20.0%
!!! CAAATCATTTTTTTACTTGT+GGG - chr8.2:6415714-6415733 None:intergenic 20.0%
!!! CAATACATTATTTCTACATT+TGG + chr8.2:6419551-6419570 MS.gene051863:intron 20.0%
!!! CAATATATTTTCTATGTTGA+TGG + chr8.2:6418660-6418679 MS.gene051863:intron 20.0%
!!! CTTTTTCGAATTTAAAAGTA+GGG - chr8.2:6420114-6420133 None:intergenic 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG + chr8.2:6417478-6417497 MS.gene051863:intron 20.0%
!!! GTTATTGATAATGATAGATT+AGG + chr8.2:6415449-6415468 MS.gene051863:intron 20.0%
!!! TATTTGCTAGTATTTTGTTA+TGG + chr8.2:6417842-6417861 MS.gene051863:intron 20.0%
!!! TCAAATCATTTTTTTACTTG+TGG - chr8.2:6415715-6415734 None:intergenic 20.0%
!!! TCTTTTTCGAATTTAAAAGT+AGG - chr8.2:6420115-6420134 None:intergenic 20.0%
!!! TTCTCTTATTTATCTTCTTT+TGG - chr8.2:6415844-6415863 None:intergenic 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG + chr8.2:6417026-6417045 MS.gene051863:intron 20.0%
!!! TTTTCAAAACTTACTTTGTT+CGG - chr8.2:6420339-6420358 None:intergenic 20.0%
! AAATATATGACTATGACGAA+TGG - chr8.2:6417008-6417027 None:intergenic 25.0%
! AAATTAAGCTCAAATGAACA+TGG - chr8.2:6418464-6418483 None:intergenic 25.0%
! AAGTTGAAGGAAAAATTTAG+AGG - chr8.2:6417085-6417104 None:intergenic 25.0%
! AATTGAATGCACAAAGTTTA+AGG - chr8.2:6419493-6419512 None:intergenic 25.0%
! AATTTCCAATGTTCATGAAT+TGG + chr8.2:6415344-6415363 MS.gene051863:CDS 25.0%
! ACAAATATTGCAATTCTGTA+AGG + chr8.2:6420533-6420552 MS.gene051863:CDS 25.0%
! ACAAGGAAAATAAGAGAAAT+TGG + chr8.2:6416698-6416717 MS.gene051863:intron 25.0%
! ACGTAGAAAATTTCTTCATT+AGG - chr8.2:6420453-6420472 None:intergenic 25.0%
! ACTTTGAATTAATTCATAGG+TGG + chr8.2:6420403-6420422 MS.gene051863:intron 25.0%
! AGAAAATATATTGGAAACTG+AGG - chr8.2:6418653-6418672 None:intergenic 25.0%
! AGAATGTCTGAATTTAATGA+AGG + chr8.2:6420247-6420266 MS.gene051863:CDS 25.0%
! AGCATATAATCAAAACCAAA+AGG - chr8.2:6417794-6417813 None:intergenic 25.0%
! AGCTCAAAACACATTTAAAA+AGG - chr8.2:6418409-6418428 None:intergenic 25.0%
! AGTTGAAGGAAAAATTTAGA+GGG - chr8.2:6417084-6417103 None:intergenic 25.0%
! ATCGAGATTCAAATATTTGT+TGG - chr8.2:6418036-6418055 None:intergenic 25.0%
! ATTGAATGCACAAAGTTTAA+GGG - chr8.2:6419492-6419511 None:intergenic 25.0%
! CAAACTAACATGTTTATCAT+TGG - chr8.2:6415553-6415572 None:intergenic 25.0%
! CAAATAAAATATTGTCACCT+GGG + chr8.2:6420670-6420689 MS.gene051863:CDS 25.0%
! CTTTGAATTAATTCATAGGT+GGG + chr8.2:6420404-6420423 MS.gene051863:intron 25.0%
! GAAAATATATTGGAAACTGA+GGG - chr8.2:6418652-6418671 None:intergenic 25.0%
! GAACATTTAATCTCATTGAA+TGG + chr8.2:6419722-6419741 MS.gene051863:CDS 25.0%
! GAGAATCTTAGATAAAAGTA+GGG - chr8.2:6418442-6418461 None:intergenic 25.0%
! GATTATTTGTATTTATCGGT+TGG + chr8.2:6415267-6415286 MS.gene051863:CDS 25.0%
! TAACATGTTTATCATTGGAT+TGG - chr8.2:6415548-6415567 None:intergenic 25.0%
! TACAGAATTGCAATATTTGT+TGG - chr8.2:6420533-6420552 None:intergenic 25.0%
! TATAAGTAAAGTAAAGAGTC+TGG - chr8.2:6417712-6417731 None:intergenic 25.0%
! TATACATTATATGGTGCAAT+TGG + chr8.2:6418717-6418736 MS.gene051863:intron 25.0%
! TCAATGAGATTAAATGTTCT+TGG - chr8.2:6419721-6419740 None:intergenic 25.0%
! TCTTGCTTATTTATCTTAAG+AGG + chr8.2:6418552-6418571 MS.gene051863:intron 25.0%
! TCTTTGTTCTAGTATGATAT+CGG - chr8.2:6418284-6418303 None:intergenic 25.0%
! TTAATTTCTTGTAGGTAAAG+TGG + chr8.2:6419654-6419673 MS.gene051863:intron 25.0%
! TTATAAGGACTAAAAGTTGA+AGG - chr8.2:6417098-6417117 None:intergenic 25.0%
! TTCGTGAAAATTTAGCAATT+AGG + chr8.2:6415647-6415666 MS.gene051863:intron 25.0%
! TTCTATAAGATTCTTAAGTC+CGG + chr8.2:6417662-6417681 MS.gene051863:intron 25.0%
! TTTGGTAAATATGTAGATGT+TGG + chr8.2:6415174-6415193 MS.gene051863:CDS 25.0%
!! AAATTTTCCATCTTCACTTT+TGG - chr8.2:6417414-6417433 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr8.2:6417446-6417465 MS.gene051863:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr8.2:6417447-6417466 MS.gene051863:intron 25.0%
!! ATAAACATGTTAGTTTGAGT+CGG + chr8.2:6415556-6415575 MS.gene051863:intron 25.0%
!! ATATGAGTTTACTTTAAAGG+AGG + chr8.2:6417386-6417405 MS.gene051863:intron 25.0%
!! CGTCATAGTCATATATTTTA+GGG + chr8.2:6417010-6417029 MS.gene051863:intron 25.0%
!! GAAATTGAAATTTTGCTTCA+GGG + chr8.2:6420076-6420095 MS.gene051863:CDS 25.0%
!! TATGAGTTTACTTTAAAGGA+GGG + chr8.2:6417387-6417406 MS.gene051863:intron 25.0%
!! TCGTCATAGTCATATATTTT+AGG + chr8.2:6417009-6417028 MS.gene051863:intron 25.0%
!! TGAAGATGGAAAATTTTTGA+AGG + chr8.2:6417418-6417437 MS.gene051863:intron 25.0%
!! TGATAATGATAGATTAGGTT+GGG + chr8.2:6415454-6415473 MS.gene051863:intron 25.0%
!! TTGATCAATTTCTGGAAAAA+AGG - chr8.2:6419819-6419838 None:intergenic 25.0%
!! TTTTATCCGTAATTTCCAAT+AGG + chr8.2:6416425-6416444 MS.gene051863:intron 25.0%
!!! AATTAAAATGTGATGGACAT+TGG + chr8.2:6416577-6416596 MS.gene051863:intron 25.0%
!!! ACAACAAAATACAGGTTTTT+TGG + chr8.2:6418864-6418883 MS.gene051863:intron 25.0%
!!! AGTCATATTTGTTGTTGTTA+AGG - chr8.2:6419026-6419045 None:intergenic 25.0%
!!! ATAAGATGATTTTTTTTGGG+TGG + chr8.2:6417767-6417786 MS.gene051863:intron 25.0%
!!! ATTTTGTTGTTTTGTCAGAA+AGG - chr8.2:6418854-6418873 None:intergenic 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG + chr8.2:6417477-6417496 MS.gene051863:intron 25.0%
!!! GAACTCAGAATTATTTTATG+CGG + chr8.2:6419154-6419173 MS.gene051863:CDS 25.0%
!!! GCTAGTATTTGTTTTTTGAA+GGG + chr8.2:6417816-6417835 MS.gene051863:intron 25.0%
!!! GTATTCATTGTTTTACAAGT+CGG - chr8.2:6416375-6416394 None:intergenic 25.0%
!!! GTTTTAGAAAATGGTAGAAA+GGG + chr8.2:6418232-6418251 MS.gene051863:intron 25.0%
!!! TATCGTTTTGTTTCTTGAAT+AGG + chr8.2:6420054-6420073 MS.gene051863:intron 25.0%
!!! TGCTAGTATTTGTTTTTTGA+AGG + chr8.2:6417815-6417834 MS.gene051863:intron 25.0%
!!! TGTTTTAGAAAATGGTAGAA+AGG + chr8.2:6418231-6418250 MS.gene051863:intron 25.0%
!!! TTGATAATGATAGATTAGGT+TGG + chr8.2:6415453-6415472 MS.gene051863:intron 25.0%
!!! TTGGTGCTAAAATACATATA+TGG + chr8.2:6418736-6418755 MS.gene051863:intron 25.0%
AAACAGAACACATGAAGAAT+GGG + chr8.2:6420590-6420609 MS.gene051863:CDS 30.0%
AAATAATCAGTCCAAGAAAG+TGG - chr8.2:6415255-6415274 None:intergenic 30.0%
AACATCCAATTCATGAACAT+TGG - chr8.2:6415352-6415371 None:intergenic 30.0%
AATGCACCTAATTATGTAGA+AGG + chr8.2:6419758-6419777 MS.gene051863:CDS 30.0%
ACCAGAGGAAAACAAAATAA+TGG + chr8.2:6417634-6417653 MS.gene051863:intron 30.0%
AGAAGTCGTTGTAAAGTAAA+CGG - chr8.2:6419682-6419701 None:intergenic 30.0%
ATATCTGCAAAATCTTGACT+AGG - chr8.2:6416554-6416573 None:intergenic 30.0%
ATGGTGCAAAAATTGCAAAA+GGG - chr8.2:6414972-6414991 None:intergenic 30.0%
ATTCTTAAGTCCGGAAAAAT+GGG + chr8.2:6417671-6417690 MS.gene051863:intron 30.0%
ATTCTTCATGTGTTCTGTTT+AGG - chr8.2:6420590-6420609 None:intergenic 30.0%
CCAAATAAAATATTGTCACC+TGG + chr8.2:6420669-6420688 MS.gene051863:CDS 30.0%
CTACAATAGGTGATGTATTT+AGG + chr8.2:6415427-6415446 MS.gene051863:intron 30.0%
CTGACAAAACAACAAAATAC+AGG + chr8.2:6418856-6418875 MS.gene051863:intron 30.0%
CTTAAACAAAACATTACAGC+AGG + chr8.2:6420289-6420308 MS.gene051863:CDS 30.0%
CTTGCGAACTAAATTTGATT+TGG - chr8.2:6416734-6416753 None:intergenic 30.0%
CTTTGATTAAATCGTTGACA+TGG - chr8.2:6417943-6417962 None:intergenic 30.0%
GATATTAGAGTCGATTAATC+TGG - chr8.2:6416313-6416332 None:intergenic 30.0%
GATGTAGATTATGCCATATT+GGG - chr8.2:6419864-6419883 None:intergenic 30.0%
GGAGAATCTTAGATAAAAGT+AGG - chr8.2:6418443-6418462 None:intergenic 30.0%
TAAACAGAACACATGAAGAA+TGG + chr8.2:6420589-6420608 MS.gene051863:CDS 30.0%
TATCTGCAAAATCTTGACTA+GGG - chr8.2:6416553-6416572 None:intergenic 30.0%
TATGTGTGAATATAAGTGGT+TGG + chr8.2:6416283-6416302 MS.gene051863:intron 30.0%
TCATGAACATTGGAAATTTG+AGG - chr8.2:6415342-6415361 None:intergenic 30.0%
TGAAAATAGCATGACTACTT+TGG - chr8.2:6419992-6420011 None:intergenic 30.0%
TGATGTAGATTATGCCATAT+TGG - chr8.2:6419865-6419884 None:intergenic 30.0%
TTCTTCATGTGTTCTGTTTA+GGG - chr8.2:6420589-6420608 None:intergenic 30.0%
TTTCTAAACTTGTGCCTTAA+GGG + chr8.2:6419574-6419593 MS.gene051863:intron 30.0%
TTTGAAGGACTAAAAGTTGA+AGG + chr8.2:6417433-6417452 MS.gene051863:intron 30.0%
! AATAGGTTGGACAATAATTG+GGG + chr8.2:6416442-6416461 MS.gene051863:intron 30.0%
! AGAGTTTTCGTCGTAATATT+TGG - chr8.2:6419897-6419916 None:intergenic 30.0%
! ATTTAATGAAGGTGTGTTCA+AGG + chr8.2:6420258-6420277 MS.gene051863:CDS 30.0%
! CAAAAATTGCAAAAGGGTTT+TGG - chr8.2:6414966-6414985 None:intergenic 30.0%
! CAATAGGTTGGACAATAATT+GGG + chr8.2:6416441-6416460 MS.gene051863:intron 30.0%
! CAATTTCTGGAAAAAAGGAT+AGG - chr8.2:6419814-6419833 None:intergenic 30.0%
! CCAGGTGACAATATTTTATT+TGG - chr8.2:6420672-6420691 None:intergenic 30.0%
! GGAAATTGAAATTTTGCTTC+AGG + chr8.2:6420075-6420094 MS.gene051863:intron 30.0%
! GGTTGACTTTCTAAAAAATC+TGG - chr8.2:6418592-6418611 None:intergenic 30.0%
! TATTTGTATTTATCGGTTGG+TGG + chr8.2:6415270-6415289 MS.gene051863:CDS 30.0%
! TGAAGAAATTTTCTACGTTG+TGG + chr8.2:6420455-6420474 MS.gene051863:CDS 30.0%
! TTTAATGAAGGTGTGTTCAA+GGG + chr8.2:6420259-6420278 MS.gene051863:CDS 30.0%
!! AACATGTTACTTACCCTTTT+GGG - chr8.2:6419242-6419261 None:intergenic 30.0%
!! ACTAGAACAAAGAGTACTAT+AGG + chr8.2:6418291-6418310 MS.gene051863:intron 30.0%
!! GAATTATTTTATGCGGTTCT+TGG + chr8.2:6419161-6419180 MS.gene051863:CDS 30.0%
!! GTGTTTTGAATTAATACCAG+AGG + chr8.2:6417619-6417638 MS.gene051863:intron 30.0%
!! TCTCAAAAGTATTCCATTTG+AGG - chr8.2:6420629-6420648 None:intergenic 30.0%
!!! ACAGTTTTTTTCGTAATGCA+TGG - chr8.2:6416046-6416065 None:intergenic 30.0%
!!! ACCATTATTTTGTTTTCCTC+TGG - chr8.2:6417638-6417657 None:intergenic 30.0%
!!! AGAGCAGTTGTTTTAGAAAA+TGG + chr8.2:6418223-6418242 MS.gene051863:intron 30.0%
!!! ATTTTTCCTTTGGCTTTCAT+AGG + chr8.2:6419098-6419117 MS.gene051863:intron 30.0%
!!! ATTTTTGGAGTTATCATGCT+AGG + chr8.2:6416875-6416894 MS.gene051863:intron 30.0%
!!! CTGCTGTAATGTTTTGTTTA+AGG - chr8.2:6420291-6420310 None:intergenic 30.0%
!!! GTCTAGCCATTTTAATTTGT+TGG - chr8.2:6418000-6418019 None:intergenic 30.0%
!!! TTTTTCCTTTGGCTTTCATA+GGG + chr8.2:6419099-6419118 MS.gene051863:intron 30.0%
AAAACAACTGCTCTCGTATT+AGG - chr8.2:6418217-6418236 None:intergenic 35.0%
AATTCAGACATTCTAGATCC+TGG - chr8.2:6420241-6420260 None:intergenic 35.0%
ACCTATTGTAGTAACTAGGA+GGG - chr8.2:6415418-6415437 None:intergenic 35.0%
ACTTACTTTGTTCGGTTCAT+TGG - chr8.2:6420331-6420350 None:intergenic 35.0%
ATACTGATGAGCTAACACTA+AGG + chr8.2:6420167-6420186 MS.gene051863:CDS 35.0%
ATCCGTAATTTCCAATAGGT+TGG + chr8.2:6416429-6416448 MS.gene051863:intron 35.0%
ATTTCTTAACATGTGCCCTA+AGG - chr8.2:6419452-6419471 None:intergenic 35.0%
CATCACCTATTGTAGTAACT+AGG - chr8.2:6415422-6415441 None:intergenic 35.0%
CATGAATTGGATGTTGTTAC+TGG + chr8.2:6415357-6415376 MS.gene051863:CDS 35.0%
CCAATTATTGTCCAACCTAT+TGG - chr8.2:6416443-6416462 None:intergenic 35.0%
CTATGTCAATTAGCTAGTTG+AGG + chr8.2:6416945-6416964 MS.gene051863:intron 35.0%
CTCTTGCTGCTATAGTAAAA+GGG - chr8.2:6415047-6415066 None:intergenic 35.0%
CTTACTTTGTTCGGTTCATT+GGG - chr8.2:6420330-6420349 None:intergenic 35.0%
GACAATCCATGACAAATGAT+GGG + chr8.2:6415088-6415107 MS.gene051863:CDS 35.0%
GACATAACTCACCTTATAAC+TGG - chr8.2:6416179-6416198 None:intergenic 35.0%
GATATGAACAAGTTAGACCT+TGG + chr8.2:6417554-6417573 MS.gene051863:intron 35.0%
GATGGTGCAAAAATTGCAAA+AGG - chr8.2:6414973-6414992 None:intergenic 35.0%
GATTCTTAAGTCCGGAAAAA+TGG + chr8.2:6417670-6417689 MS.gene051863:intron 35.0%
GGATATGAGCTCATATTCTT+TGG + chr8.2:6416463-6416482 MS.gene051863:intron 35.0%
GGGAGAAAAATTCGAATGTT+AGG - chr8.2:6415694-6415713 None:intergenic 35.0%
GGTAAATATGTAGATGTTGG+TGG + chr8.2:6415177-6415196 MS.gene051863:CDS 35.0%
GTCCAACCTATTGGAAATTA+CGG - chr8.2:6416434-6416453 None:intergenic 35.0%
GTGAATTATGTGGCCAAAAT+CGG - chr8.2:6414944-6414963 None:intergenic 35.0%
GTTTCTAAACTTGTGCCTTA+AGG + chr8.2:6419573-6419592 MS.gene051863:intron 35.0%
TACTGATGAGCTAACACTAA+GGG + chr8.2:6420168-6420187 MS.gene051863:CDS 35.0%
TATATTGGAAACTGAGGGAT+AGG - chr8.2:6418647-6418666 None:intergenic 35.0%
TCTTCATGTGTTCTGTTTAG+GGG - chr8.2:6420588-6420607 None:intergenic 35.0%
TGAGCTCATATTCTTTGGTA+AGG + chr8.2:6416468-6416487 MS.gene051863:intron 35.0%
TGGAAATTTGAGGACCAAAT+CGG - chr8.2:6415332-6415351 None:intergenic 35.0%
TTCTAGATCCTGGAACAAAT+AGG - chr8.2:6420231-6420250 None:intergenic 35.0%
TTCTTAAGTCCGGAAAAATG+GGG + chr8.2:6417672-6417691 MS.gene051863:intron 35.0%
TTGCAATTCTGTAAGGATGT+CGG + chr8.2:6420540-6420559 MS.gene051863:CDS 35.0%
TTGTTGGATTGAAAACGAGT+TGG - chr8.2:6417984-6418003 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG - chr8.2:6419451-6419470 None:intergenic 35.0%
! AAATATGTAGATGTTGGTGG+TGG + chr8.2:6415180-6415199 MS.gene051863:CDS 35.0%
! AACTGGGTTTGATAATTTGG+AGG + chr8.2:6420491-6420510 MS.gene051863:CDS 35.0%
! ATAGGTTGAATTAGTACGTG+TGG - chr8.2:6418629-6418648 None:intergenic 35.0%
! CCAATAGGTTGGACAATAAT+TGG + chr8.2:6416440-6416459 MS.gene051863:intron 35.0%
! CTTCATATGACGAGTCTTTT+TGG - chr8.2:6419966-6419985 None:intergenic 35.0%
! CTTTTACTATAGCAGCAAGA+GGG + chr8.2:6415046-6415065 MS.gene051863:CDS 35.0%
! GAGCTTAGAAATAATGGGAA+TGG + chr8.2:6415141-6415160 MS.gene051863:CDS 35.0%
! GATATACTTTTAGTGTCTCG+TGG + chr8.2:6418063-6418082 MS.gene051863:intron 35.0%
! TGCAACTGGGTTTGATAATT+TGG + chr8.2:6420488-6420507 MS.gene051863:CDS 35.0%
! TGTTCTTTTTCTTTAGGCCA+AGG - chr8.2:6417574-6417593 None:intergenic 35.0%
!! AAGGGTTTTGGTGAATTATG+TGG - chr8.2:6414954-6414973 None:intergenic 35.0%
!! GAACATGTTACTTACCCTTT+TGG - chr8.2:6419243-6419262 None:intergenic 35.0%
!! TTATTTTATGCGGTTCTTGG+AGG + chr8.2:6419164-6419183 MS.gene051863:CDS 35.0%
!!! TTTTTTTTGGGTGGACCTTT+TGG + chr8.2:6417776-6417795 MS.gene051863:intron 35.0%
AAAAAGGATAGGTCTAGTGG+TGG - chr8.2:6419803-6419822 None:intergenic 40.0%
AAAATATTGTCACCTGGGCA+AGG + chr8.2:6420675-6420694 MS.gene051863:CDS 40.0%
AAATATTGTCACCTGGGCAA+GGG + chr8.2:6420676-6420695 MS.gene051863:CDS 40.0%
AAGGACTTACACCACTTTCT+TGG + chr8.2:6415241-6415260 MS.gene051863:CDS 40.0%
AATAGGTCTAACCAAGGATG+TGG - chr8.2:6420214-6420233 None:intergenic 40.0%
AATGTTAACGTGTGCCCTTA+AGG - chr8.2:6419591-6419610 None:intergenic 40.0%
ATAGGTCTAACCAAGGATGT+GGG - chr8.2:6420213-6420232 None:intergenic 40.0%
ATGGACATTGGAGATTTCAC+TGG + chr8.2:6416589-6416608 MS.gene051863:intron 40.0%
CACAATCCCATCATTTGTCA+TGG - chr8.2:6415097-6415116 None:intergenic 40.0%
CACCTATTGTAGTAACTAGG+AGG - chr8.2:6415419-6415438 None:intergenic 40.0%
CCTCTTGCTGCTATAGTAAA+AGG - chr8.2:6415048-6415067 None:intergenic 40.0%
CGTGTGGCAATATACTTTGT+TGG - chr8.2:6418613-6418632 None:intergenic 40.0%
CTCTCAAGATCATGTTGATC+AGG + chr8.2:6419913-6419932 MS.gene051863:CDS 40.0%
GAAGAATGGGTGGAACAATA+TGG + chr8.2:6420603-6420622 MS.gene051863:CDS 40.0%
GAGGGACTAAAACGAAAAGT+TGG + chr8.2:6417465-6417484 MS.gene051863:intron 40.0%
GCTGCTATAGTAAAAGGGAT+AGG - chr8.2:6415042-6415061 None:intergenic 40.0%
GGAAAAAAGGATAGGTCTAG+TGG - chr8.2:6419806-6419825 None:intergenic 40.0%
GGAACAAATAGGTCTAACCA+AGG - chr8.2:6420220-6420239 None:intergenic 40.0%
GGACAATCCATGACAAATGA+TGG + chr8.2:6415087-6415106 MS.gene051863:CDS 40.0%
GGGAATGGAATTGTTGTGTT+TGG + chr8.2:6415156-6415175 MS.gene051863:CDS 40.0%
TACTACGTACGCTGAATATC+AGG - chr8.2:6416978-6416997 None:intergenic 40.0%
TATGCCATATTGGGTTACCA+AGG - chr8.2:6419855-6419874 None:intergenic 40.0%
TCCCTCCTAGTTACTACAAT+AGG + chr8.2:6415414-6415433 MS.gene051863:intron 40.0%
TGGAACAATATGGCCTCAAA+TGG + chr8.2:6420613-6420632 MS.gene051863:CDS 40.0%
TGGTTAGACCTATTTGTTCC+AGG + chr8.2:6420220-6420239 MS.gene051863:CDS 40.0%
TTGCATGCAAGCCTTGAAAA+AGG + chr8.2:6415222-6415241 MS.gene051863:CDS 40.0%
TTTCATAGGGAAAGGAGACT+TGG + chr8.2:6419112-6419131 MS.gene051863:intron 40.0%
! AACGACTTCTCTGCATTTTC+TGG + chr8.2:6419692-6419711 MS.gene051863:CDS 40.0%
! ACTTCCTTGGTAACCCAATA+TGG + chr8.2:6419848-6419867 MS.gene051863:CDS 40.0%
! AGTGTTAACTTGAGCCCTTA+GGG + chr8.2:6419434-6419453 MS.gene051863:intron 40.0%
! ATACTTTTAGTGTCTCGTGG+AGG + chr8.2:6418066-6418085 MS.gene051863:intron 40.0%
! ATGCGAGGTTGATCAATTTC+TGG - chr8.2:6419827-6419846 None:intergenic 40.0%
! CATGACAAATGATGGGATTG+TGG + chr8.2:6415095-6415114 MS.gene051863:CDS 40.0%
! CCTTTTACTATAGCAGCAAG+AGG + chr8.2:6415045-6415064 MS.gene051863:CDS 40.0%
! GAAGCTTTGTCCACTAATAC+CGG - chr8.2:6415310-6415329 None:intergenic 40.0%
! GTTGTTGTTAAGGCTCTTGT+AGG - chr8.2:6419016-6419035 None:intergenic 40.0%
! TAGTGTTAACTTGAGCCCTT+AGG + chr8.2:6419433-6419452 MS.gene051863:intron 40.0%
! TGAGACTCGTCACTTTATGT+AGG - chr8.2:6418183-6418202 None:intergenic 40.0%
! TGTTAGTTTGAGTCGGATCA+TGG + chr8.2:6415563-6415582 MS.gene051863:intron 40.0%
!! AACAAAGAGTACTATAGGCG+TGG + chr8.2:6418296-6418315 MS.gene051863:intron 40.0%
!! AGTCACATACCCCATTTTTC+CGG - chr8.2:6417684-6417703 None:intergenic 40.0%
!! GTGGTGTAAGTCCTTTTTCA+AGG - chr8.2:6415236-6415255 None:intergenic 40.0%
!!! TGGATTTTTTGCGTGCAACT+GGG + chr8.2:6420475-6420494 MS.gene051863:CDS 40.0%
ACTATAGGCGTGGAGATCTA+TGG + chr8.2:6418306-6418325 MS.gene051863:intron 45.0%
AGTGGACAAAGCTTCCGATT+TGG + chr8.2:6415315-6415334 MS.gene051863:CDS 45.0%
ATCGGTTGAGGCTAGTGAAA+TGG - chr8.2:6414926-6414945 None:intergenic 45.0%
CAGAACACATGAAGAATGGG+TGG + chr8.2:6420593-6420612 MS.gene051863:CDS 45.0%
CCTTTCCCTATGAAAGCCAA+AGG - chr8.2:6419107-6419126 None:intergenic 45.0%
CTCTCTAATGCCGGTATTAG+TGG + chr8.2:6415297-6415316 MS.gene051863:CDS 45.0%
GACATTGGAGATTTCACTGG+TGG + chr8.2:6416592-6416611 MS.gene051863:intron 45.0%
GTTACCAAGGAAGTTATGCG+AGG - chr8.2:6419842-6419861 None:intergenic 45.0%
TAGTTGAAAATCCCTTGCCC+AGG - chr8.2:6420690-6420709 None:intergenic 45.0%
TATGTGGCCAAAATCGGTTG+AGG - chr8.2:6414938-6414957 None:intergenic 45.0%
TCAACCTCGCATAACTTCCT+TGG + chr8.2:6419835-6419854 MS.gene051863:CDS 45.0%
TGAGGCTAGTGAAATGGTCA+CGG - chr8.2:6414920-6414939 None:intergenic 45.0%
! AGCTAACACTAAGGGCACAA+GGG + chr8.2:6420176-6420195 MS.gene051863:CDS 45.0%
! GGGCAAGGGATTTTCAACTA+AGG + chr8.2:6420690-6420709 MS.gene051863:CDS 45.0%
! TTTGGGATATCCCACATCCT+TGG + chr8.2:6420200-6420219 MS.gene051863:CDS 45.0%
!! CCTTTGGCTTTCATAGGGAA+AGG + chr8.2:6419104-6419123 MS.gene051863:intron 45.0%
!! TCACTAGCCTCAACCGATTT+TGG + chr8.2:6414928-6414947 MS.gene051863:CDS 45.0%
!! TTACTTACCCTTTTGGGTGC+AGG - chr8.2:6419236-6419255 None:intergenic 45.0%
!!! GTGGATTTTTTGCGTGCAAC+TGG + chr8.2:6420474-6420493 MS.gene051863:CDS 45.0%
!! AAAATAAAATATACATTATA+TGG + chr8.2:6418708-6418727 MS.gene051863:intron 5.0%
!! AATATTGTATTAATATTATA+CGG + chr8.2:6416109-6416128 MS.gene051863:intron 5.0%
!!! ATAATGTATATTTTATTTTT+AGG - chr8.2:6418707-6418726 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + chr8.2:6417301-6417320 MS.gene051863:intron 5.0%
!!! TAATGTATATTTTATTTTTA+GGG - chr8.2:6418706-6418725 None:intergenic 5.0%
!!! TGAAAATAAATTTTTTTTAA+AGG + chr8.2:6418914-6418933 MS.gene051863:intron 5.0%
!!! TTTAATAATATATACTTTTT+AGG - chr8.2:6415616-6415635 None:intergenic 5.0%
!!! TTTAATTAGTAATTTAATTT+AGG - chr8.2:6419623-6419642 None:intergenic 5.0%
ACTATAGCAGCAAGAGGGCA+AGG + chr8.2:6415051-6415070 MS.gene051863:CDS 50.0%
AGGCTAGTGAAATGGTCACG+GGG - chr8.2:6414918-6414937 None:intergenic 50.0%
CTATAGCAGCAAGAGGGCAA+GGG + chr8.2:6415052-6415071 MS.gene051863:CDS 50.0%
GAGGCTAGTGAAATGGTCAC+GGG - chr8.2:6414919-6414938 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+TGG + chr8.2:6417404-6417423 MS.gene051863:intron 50.0%
GGTGGAACTCTCTCTAATGC+CGG + chr8.2:6415288-6415307 MS.gene051863:CDS 50.0%
GTCCAAGAGCTATTCTTGCC+CGG - chr8.2:6419214-6419233 None:intergenic 50.0%
TATGCGGTTCTTGGAGGTCT+AGG + chr8.2:6419170-6419189 MS.gene051863:CDS 50.0%
TCCAAGAGCTATTCTTGCCC+GGG - chr8.2:6419213-6419232 None:intergenic 50.0%
TCTTGGACCTGCACCCAAAA+GGG + chr8.2:6419226-6419245 MS.gene051863:CDS 50.0%
! ACTAAGGGCACAAGGGCTTT+GGG + chr8.2:6420183-6420202 MS.gene051863:CDS 50.0%
! GAGCTAACACTAAGGGCACA+AGG + chr8.2:6420175-6420194 MS.gene051863:CDS 50.0%
!! ATGTTGGTGGTGGACAACGT+TGG + chr8.2:6415190-6415209 MS.gene051863:CDS 50.0%
!! GGGCAAGGGCATTCAGTTAA+TGG + chr8.2:6415066-6415085 MS.gene051863:CDS 50.0%
ACCCGGGCAAGAATAGCTCT+TGG + chr8.2:6419209-6419228 MS.gene051863:CDS 55.0%
CTCTTGGACCTGCACCCAAA+AGG + chr8.2:6419225-6419244 MS.gene051863:CDS 55.0%
! CACTAAGGGCACAAGGGCTT+TGG + chr8.2:6420182-6420201 MS.gene051863:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 6414901 6420710 6414901 ID=MS.gene051863
chr8.2 mRNA 6414901 6420710 6414901 ID=MS.gene051863.t1;Parent=MS.gene051863
chr8.2 exon 6414901 6415378 6414901 ID=MS.gene051863.t1.exon1;Parent=MS.gene051863.t1
chr8.2 CDS 6414901 6415378 6414901 ID=cds.MS.gene051863.t1;Parent=MS.gene051863.t1
chr8.2 exon 6419120 6419247 6419120 ID=MS.gene051863.t1.exon2;Parent=MS.gene051863.t1
chr8.2 CDS 6419120 6419247 6419120 ID=cds.MS.gene051863.t1;Parent=MS.gene051863.t1
chr8.2 exon 6419668 6419934 6419668 ID=MS.gene051863.t1.exon3;Parent=MS.gene051863.t1
chr8.2 CDS 6419668 6419934 6419668 ID=cds.MS.gene051863.t1;Parent=MS.gene051863.t1
chr8.2 exon 6420076 6420344 6420076 ID=MS.gene051863.t1.exon4;Parent=MS.gene051863.t1
chr8.2 CDS 6420076 6420344 6420076 ID=cds.MS.gene051863.t1;Parent=MS.gene051863.t1
chr8.2 exon 6420422 6420710 6420422 ID=MS.gene051863.t1.exon5;Parent=MS.gene051863.t1
chr8.2 CDS 6420422 6420710 6420422 ID=cds.MS.gene051863.t1;Parent=MS.gene051863.t1
Gene Sequence

>MS.gene051863

ATGCTTAGTCGTGACCCCGTGACCATTTCACTAGCCTCAACCGATTTTGGCCACATAATTCACCAAAACCCTTTTGCAATTTTTGCACCATCTTCTATTAATGATATATCAAAATTGATCAAATTCTCAAATTCACTTCCTATCCCTTTTACTATAGCAGCAAGAGGGCAAGGGCATTCAGTTAATGGACAATCCATGACAAATGATGGGATTGTGGTGAACATGACTGAATTGAATAATGAGCTTAGAAATAATGGGAATGGAATTGTTGTGTTTGGTAAATATGTAGATGTTGGTGGTGGACAACGTTGGATTGATGTGTTGCATGCAAGCCTTGAAAAAGGACTTACACCACTTTCTTGGACTGATTATTTGTATTTATCGGTTGGTGGAACTCTCTCTAATGCCGGTATTAGTGGACAAAGCTTCCGATTTGGTCCTCAAATTTCCAATGTTCATGAATTGGATGTTGTTACTGGTACGTATGAATCATTCTTTTCTTTGATAATTCTCTCCCTCCTAGTTACTACAATAGGTGATGTATTTAGGTTATTGATAATGATAGATTAGGTTGGGTGAGTTTTGACTAAACTCATTTTACAACTTAAACAAATTGTATTCAGTTTTTTTATGTCAAACACGAACCAATCCAATGATAAACATGTTAGTTTGAGTCGGATCATGGACTCATCTATCATTTTTTTTGAAAATTCCTAAAAAGTATATATTATTAAATGATATTCTATTTCGTGAAAATTTAGCAATTAGGCTTAACTCTAGAAATCAAAATCCTAACATTCGAATTTTTCTCCCACAAGTAAAAAAATGATTTGAATCTAACTAAAACACTTATAAATCAACACATAAAATTTATAATCTATATTAATTTTTGAAATAAAAAATCACATTTGAAATCAGAAATTAACTTGTTATACGCGAACCAAAAGAAGATAAATAAGAGAAAATTAATGTTGATTTTAAATATTATATATATATATATATATATATATATATATATATATATATATATATATACTTTTATTCCCCCAGAAAAAAATATATAGTTTTATTATTACAAAAAAAACTGTTTAATAATAGGATGGATAAATGGATCAATATTAATACAATATTTTTCTGTTGGTCCATGCATTACGAAAAAAACTGTTTAATAATTAGATCAAATGCATTAAACTAATTAAATGCTAAAAAATATTGTATTAATATTATACGGGTTCTATTCTATTTTTTTTTTAGGGTTAACTTATCTTTATAAAACCAGTTATAAGGTGAGTTATGTCATTCTTTTTAAACTCATTTCATATATTATAAAAGTCTTGAGTTTGCACATTTATATGTCTCGTCAAATCGTTACTACTCGATTTTATGTGTGAATATAAGTGGTTGGCAGACCAGATTAATCGACTCTAATATCATGTTATATTTTCATATTGAGTCAATTCAAACTTACAAGCCGACTTGTAAAACAATGAATACTATTCTTTATAAATTCATCTTAGATCTTATTTTTATCCGTAATTTCCAATAGGTTGGACAATAATTGGGGATATGAGCTCATATTCTTTGGTAAGGTCTTGAATTCAAGATTTTGCAGATATACAAAATCAAAATGTGATAGACATTATAGATTTCCCTAGTCAAGATTTTGCAGATATACAAATTAAAATGTGATGGACATTGGAGATTTCACTGGTGGTCAATATTTTCTCTTAAATATCTTGAGTATACATAATACATATAAACTCTAGAATATCTTGAGTAATACTATAACAATTAACAACAAGGAAAATAAGAGAAATTGGTTTTATTCAACCAAATCAAATTTAGTTCGCAAGAATTTATTTAGCTATCTTGGTATGTCGCATCATATCTTTATAGCAGATTTTAACTTGTCTCTATATGAAGTGAAAATTGACTATGTCAATAAAAATTTATGTATGGGGGATTAATAATTATATTTTTGGAGTTATCATGCTAGGTTCAAATTCTACATGTCTATTTTTAAGTATCAAAATAAATTGTCTAACTATGTCAATTAGCTAGTTGAGGTTTATCTCCTGATATTCAGCGTACGTAGTATCATCGTCCATTCGTCATAGTCATATATTTTAGGGTTAAATATGTTTTTGGTCCCTATAAATATATCAATTTTTCGTTTTAGTCCCTCTAAATTTTTCCTTCAACTTTTAGTCCTTATAAAATTTTCAATCACTACTTTTGGTCCCTATTTTTAAGTTTATTTTAGTATTTTTTTAATGAAATTGTGTAGAATAATGTAAAAATATTTTCCAAAAAAAATATTTTTTTTTAACAAAAACATATATTTAATATGAATTTTTAACCATAAAAAATATAAAAACTCATATTAAATTCATGTTTTGTTAAAAAATTCTAATTTTTTTTGGTAGAGATTGTTATAATATTATGAATTTTTCTGCAAAATTTTATTCAAAAATATGAATTCTACATATGAGTTTACTTTAAAGGAGGGACCAAAAGTGAAGATGGAAAATTTTTGAAGGACTAAAAGTTGAAGGAAAATTTTAGAGGGACTAAAACGAAAAGTTGGTATATTTATAGGGACCAAAAACATATAAAATATAGTGTACTATGATTTATTATAGAATAACAGATAGATATGAACAAGTTAGACCTTGGCCTAAAGAAAAAGAACAAAATTTGTTCTTAAAGGAGATTACTGTGTTTTGAATTAATACCAGAGGAAAACAAAATAATGGTTTTGTTCTATAAGATTCTTAAGTCCGGAAAAATGGGGTATGTGACTCGAATCCAGACTCTTTACTTTACTTATAGAACAAATGACTCTTTTTTTTTTTTTTTTATAATTATAAGATGATTTTTTTTGGGTGGACCTTTTGGTTTTGATTATATGCTTTGCTAGTATTTGTTTTTTGAAGGGATTTATTTGCTAGTATTTTGTTATGGATGACTAGAAAATGCAAAATTAAATAAAATAAGAATGTTAGTGTCACGTGACTTCATCATATATTTATGAAGATTCCATGTCAACGATTTAATCAAAGTAAGATATGCAACAGAAACCAACTCGTTTTCAATCCAACAAATTAAAATGGCTAGACTTTTGTTACATTGCCAACAAATATTTGAATCTCGATTGCGAAAGATATACTTTTAGTGTCTCGTGGAGGATTGTTATGTACACTATTTTTGTAACACTCTTTCTAACACTTACTCTTTTATTAGATGAAATCTATGTGAGTATCATACATTAAAATAGATCCTACATAAAGTGACGAGTCTCACATAGATTTCACCTAATACGAGAGCAGTTGTTTTAGAAAATGGTAGAAAGGGAGTGTTTCTAACATTTCGCTTAGTGTCCGATATCATACTAGAACAAAGAGTACTATAGGCGTGGAGATCTATGGAGAGACAAGATTGCAACATGAAAGAAATATTAACTCAAAATATTTTATCTAATGGTAAAAACTATTTTATTTAGTGTCCTTTTTAAATGTGTTTTGAGCTTTAAGATTCTCCCTACTTTTATCTAAGATTCTCCATGTTCATTTGAGCTTAATTTAATTGATATGAATATTGCATATTATATATAAAGTTTATGGTTCAAACTCCAAAAACTTTACTTATTTATCTTGCTTATTTATCTTAAGAGGAGCATTCTATTTGACCAGATTTTTTAGAAAGTCAACCAACAAAGTATATTGCCACACGTACTAATTCAACCTATCCCTCAGTTTCCAATATATTTTCTATGTTGATGGCGCAAAAAATTAGTTCAATTCCCTAAAAATAAAATATACATTATATGGTGCAATTGGTGCTAAAATACATATATGGTGCAATAATAAAATAATAAAAGTCATAGAGACTATTTGTCAAAAAAAAAAAAATCATAGAGACTAGTAGCTCTTCAAATTAACAATTAAATACCTTTCTGACAAAACAACAAAATACAGGTTTTTTGGAAATAAAAGTTTTTTTTTTTGACAAATTGAAAATAAATTTTTTTTAAAGGTGAAAATACAACATTTGTATGTATTTTTTAATATTAAATATAAGATTGTTTTTGACAATGTTTATTAGTAGTAACACCTACAAGAGCCTTAACAACAACAAATATGACTAATGAACTCAAATATCATCAAGAAAAACATGCTATTTACATTTTTGTTTTATATTTTTCCTTTGGCTTTCATAGGGAAAGGAGACTTGGTGACTTGTTCTACAGAGAAGAACTCAGAATTATTTTATGCGGTTCTTGGAGGTCTAGGCCAATTTGGGATTATAACCCGGGCAAGAATAGCTCTTGGACCTGCACCCAAAAGGGTAAGTAACATGTTCTCTAATTAATATATTTACTTATTCGTATGGTTTCTTGTTCGTATGTCACAATCATAATAATAGTTGTTTGCTATTTGCTATAATGCGTATTTGCAAGTCAAACTTAGAAAAATATGCATTAATCATGAATATATTATCCTTAAATTTTTGTAAATTCTTTTATTATAGGGTAGTGTTAACTTGAGCCCTTAGGGCACATGTTAAGAAATCTAAAAAAAGAAATATTCCCTTAAACTTTGTGCATTCAATTCATTAAAACATTAAAGATTAAATTTAATGCACGCATTCCAATACATTATTTCTACATTTGGTTTCTAAACTTGTGCCTTAAGGGCACACGTTAACATTTCCCTTTATCCTAAATTAAATTACTAATTAAACAATTGTTTGATTAATTTCTTGTAGGTAAAGTGGCTCCGTTTACTTTACAACGACTTCTCTGCATTTTCTGGAGACCAAGAACATTTAATCTCATTGAATGGAATAGATGAAACTAATGCACCTAATTATGTAGAAGGTTTTTTGCTTCTAAATCAGCCACCACTAGACCTATCCTTTTTTCCAGAAATTGATCAACCTCGCATAACTTCCTTGGTAACCCAATATGGCATAATCTACATCATTGAACTTGCCAAATATTACGACGAAAACTCTCAAGATCATGTTGATCAGGTAATTATTTTTTTAAGATTCTTGCATTCCAAAAAGACTCGTCATATGAAGAAACCAAAGTAGTCATGCTATTTTCATTTCTTCTTTGTTTGTATGATTAATTTATCTACTAACATAGATATCGTTTTGTTTCTTGAATAGGAAATTGAAATTTTGCTTCAGGGATTAAAGTTTGTCCCTACTTTTAAATTCGAAAAAGACGCGTCGTACGAAGAATTTCTAGATAGAGTTCATACTGATGAGCTAACACTAAGGGCACAAGGGCTTTGGGATATCCCACATCCTTGGTTAGACCTATTTGTTCCAGGATCTAGAATGTCTGAATTTAATGAAGGTGTGTTCAAGGGTATTATCCTTAAACAAAACATTACAGCAGGACTTGTAATAGTGTACCCAATGAACCGAACAAAGTAAGTTTTGAAAAATTATTTAATTAATTATAATGATGAAATTCACAAGCATATTTATACTTTGAATTAATTCATAGGTGGGATGATAAGATGTCAGCTGTTACACCTAATGAAGAAATTTTCTACGTTGTGGATTTTTTGCGTGCAACTGGGTTTGATAATTTGGAGGCATATCAGTCTCAAAACCAACAAATATTGCAATTCTGTAAGGATGTCGGTATCGAGATCAAACATTATCTTCCCCTAAACAGAACACATGAAGAATGGGTGGAACAATATGGCCTCAAATGGAATACTTTTGAGAAAAGAAAAAATCAATTTGATCCAAATAAAATATTGTCACCTGGGCAAGGGATTTTCAACTAA

Protein sequence

>MS.gene051863.t1

MLSRDPVTISLASTDFGHIIHQNPFAIFAPSSINDISKLIKFSNSLPIPFTIAARGQGHSVNGQSMTNDGIVVNMTELNNELRNNGNGIVVFGKYVDVGGGQRWIDVLHASLEKGLTPLSWTDYLYLSVGGTLSNAGISGQSFRFGPQISNVHELDVVTGKGDLVTCSTEKNSELFYAVLGGLGQFGIITRARIALGPAPKRVKWLRLLYNDFSAFSGDQEHLISLNGIDETNAPNYVEGFLLLNQPPLDLSFFPEIDQPRITSLVTQYGIIYIIELAKYYDENSQDHVDQEIEILLQGLKFVPTFKFEKDASYEEFLDRVHTDELTLRAQGLWDIPHPWLDLFVPGSRMSEFNEGVFKGIILKQNITAGLVIVYPMNRTKWDDKMSAVTPNEEIFYVVDFLRATGFDNLEAYQSQNQQILQFCKDVGIEIKHYLPLNRTHEEWVEQYGLKWNTFEKRKNQFDPNKILSPGQGIFN