Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38714.t1 | XP_003603039.1 | 99.4 | 637 | 4 | 0 | 1 | 637 | 1 | 637 | 0.00E+00 | 1204.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38714.t1 | P40781 | 70.0 | 494 | 137 | 5 | 149 | 635 | 4 | 493 | 2.9e-207 | 723.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38714.t1 | G7J6D3 | 99.4 | 637 | 4 | 0 | 1 | 637 | 1 | 637 | 0.0e+00 | 1204.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene38714 | 0.875546 | 2.83E-68 | -1.69E-46 |
| MS.gene04972 | MS.gene38714 | 0.822194 | 2.70E-53 | -1.69E-46 |
| MS.gene04985 | MS.gene38714 | 0.829305 | 5.54E-55 | -1.69E-46 |
| MS.gene049989 | MS.gene38714 | 0.837069 | 6.46E-57 | -1.69E-46 |
| MS.gene050071 | MS.gene38714 | 0.825419 | 4.74E-54 | -1.69E-46 |
| MS.gene050297 | MS.gene38714 | 0.898794 | 3.74E-77 | -1.69E-46 |
| MS.gene05124 | MS.gene38714 | 0.865723 | 4.80E-65 | -1.69E-46 |
| MS.gene051263 | MS.gene38714 | 0.833074 | 6.57E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene38714 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene051698 | MS.gene38714 | 0.837045 | 6.55E-57 | -1.69E-46 |
| MS.gene052143 | MS.gene38714 | 0.821919 | 3.12E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene38714 | 0.836314 | 1.01E-56 | -1.69E-46 |
| MS.gene053173 | MS.gene38714 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene053416 | MS.gene38714 | 0.844552 | 7.05E-59 | -1.69E-46 |
| MS.gene053417 | MS.gene38714 | 0.846318 | 2.34E-59 | -1.69E-46 |
| MS.gene054643 | MS.gene38714 | 0.986048 | 1.67E-165 | -1.69E-46 |
| MS.gene055957 | MS.gene38714 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene38714 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene057483 | MS.gene38714 | 0.818221 | 2.20E-52 | -1.69E-46 |
| MS.gene058818 | MS.gene38714 | 0.884871 | 1.32E-71 | -1.69E-46 |
| MS.gene058844 | MS.gene38714 | 0.885567 | 7.27E-72 | -1.69E-46 |
| MS.gene059300 | MS.gene38714 | 0.811557 | 6.60E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene38714 | 0.8471 | 1.43E-59 | -1.69E-46 |
| MS.gene061260 | MS.gene38714 | 0.823783 | 1.15E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38714.t1 | MTR_3g101680 | 99.215 | 637 | 5 | 0 | 1 | 637 | 1 | 637 | 0.0 | 1312 |
| MS.gene38714.t1 | MTR_4g086240 | 64.165 | 653 | 190 | 10 | 1 | 637 | 1 | 625 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38714.t1 | AT4G33400 | 69.040 | 604 | 168 | 7 | 40 | 637 | 55 | 645 | 0.0 | 857 |
| MS.gene38714.t1 | AT3G19240 | 64.489 | 597 | 192 | 7 | 49 | 637 | 63 | 647 | 0.0 | 787 |
Find 140 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAACAAGCTTAAAGTTTA+TGG | 0.161392 | 3.3:-84190781 | MS.gene38714:CDS |
| TTCTGTTGTTGTTGGTTCTT+TGG | 0.218070 | 3.3:-84190053 | MS.gene38714:CDS |
| AGTTTCTTGGTTGGTGAAAA+TGG | 0.226172 | 3.3:-84190571 | MS.gene38714:CDS |
| TTCTTGGATTGGATGATAAT+AGG | 0.234318 | 3.3:-84190228 | MS.gene38714:CDS |
| TGCTCTGGATAACAGTTTCT+TGG | 0.277028 | 3.3:-84190584 | MS.gene38714:CDS |
| CAGGCGAAAACCGCCTTTCC+TGG | 0.278921 | 3.3:-84189992 | MS.gene38714:CDS |
| CCTCTTGATTCGCATCTTGC+TGG | 0.308976 | 3.3:-84189788 | MS.gene38714:CDS |
| GGTTGGTGAAAATGGTATTC+AGG | 0.325664 | 3.3:-84190563 | MS.gene38714:CDS |
| CTGAATGAGCTAACTTTCAT+TGG | 0.327512 | 3.3:+84188293 | None:intergenic |
| TGATTGTTACCGCAGCCAAC+AGG | 0.342727 | 3.3:-84188438 | MS.gene38714:CDS |
| TTGAGCACCTTTACTATCAT+TGG | 0.356584 | 3.3:+84190273 | None:intergenic |
| GAAAATAAACTTCATTCAAC+AGG | 0.360836 | 3.3:-84190385 | MS.gene38714:CDS |
| GAGCTTGGCGCTTGGTGCTC+TGG | 0.367754 | 3.3:-84190599 | MS.gene38714:CDS |
| TTGGGCGATGAAATTCTTTA+CGG | 0.368085 | 3.3:-84190881 | MS.gene38714:CDS |
| TGGATGATAATAGGCTTTGT+AGG | 0.375035 | 3.3:-84190219 | MS.gene38714:CDS |
| GGTGATGGTTCTGTTGTTGT+TGG | 0.380337 | 3.3:-84190061 | MS.gene38714:CDS |
| TGATAGTAAAGGTGCTCAAT+TGG | 0.384390 | 3.3:-84190269 | MS.gene38714:CDS |
| GGATTTGAAGGAGGAATTTG+AGG | 0.388977 | 3.3:-84190644 | MS.gene38714:CDS |
| TGAGTACACCTGTGTTGAAT+TGG | 0.391184 | 3.3:-84190138 | MS.gene38714:CDS |
| AAGCTTAAGAGCTTTGAGTT+TGG | 0.397722 | 3.3:+84191206 | None:intergenic |
| AGATAAAGCTTAACGGCGTT+AGG | 0.399449 | 3.3:+84191159 | None:intergenic |
| TGGGAAAGTTCAGCGTGATA+TGG | 0.402288 | 3.3:-84188490 | MS.gene38714:CDS |
| GTTACATCCACATTAGTAAC+AGG | 0.405493 | 3.3:+84189959 | None:intergenic |
| ACTCGTTGTGTTGGTGGAAA+CGG | 0.405544 | 3.3:-84191063 | MS.gene38714:CDS |
| CACGCCAGTGAGAGCGAGTC+AGG | 0.407606 | 3.3:-84190665 | MS.gene38714:CDS |
| TTTCAGTGCTTTGCTACAAC+TGG | 0.410386 | 3.3:-84190082 | MS.gene38714:CDS |
| TGAATGAGCTAACTTTCATT+GGG | 0.415339 | 3.3:+84188294 | None:intergenic |
| AAAACCGCCTTTCCTGGACT+TGG | 0.418173 | 3.3:-84189986 | MS.gene38714:CDS |
| CAACACAGGTGTACTCATAT+TGG | 0.424208 | 3.3:+84190144 | None:intergenic |
| TGACCGTCATGGAATAGTTC+AGG | 0.425189 | 3.3:-84190185 | MS.gene38714:CDS |
| CACAGGGTCATCAGTTCTCT+AGG | 0.426612 | 3.3:-84190114 | MS.gene38714:CDS |
| CAACTGGGATTCATGGAAAA+GGG | 0.427004 | 3.3:-84190525 | MS.gene38714:CDS |
| GATGAAATTCTTTACGGAAC+AGG | 0.428437 | 3.3:-84190875 | MS.gene38714:CDS |
| TGATTCTCCTGAGGCTCCAT+TGG | 0.428766 | 3.3:-84188327 | MS.gene38714:CDS |
| GCAACTGGGATTCATGGAAA+AGG | 0.436550 | 3.3:-84190526 | MS.gene38714:CDS |
| GTTGTGACTGAATGGAGATT+TGG | 0.438659 | 3.3:-84190331 | MS.gene38714:CDS |
| GTTGTTGTTGGTTCTTTGGA+TGG | 0.439449 | 3.3:-84190049 | MS.gene38714:CDS |
| GGTGACAGAGAACGGGAAAC+AGG | 0.442816 | 3.3:-84188534 | MS.gene38714:CDS |
| GCTCATTCAGCATGTCCAAC+AGG | 0.443222 | 3.3:-84188280 | MS.gene38714:CDS |
| CTCACTGGCGTGGCCGAACC+AGG | 0.448366 | 3.3:+84190676 | None:intergenic |
| GTTCTTTGGATGGAAAGATT+CGG | 0.455797 | 3.3:-84190039 | MS.gene38714:CDS |
| CAAACTTGTCGTGCATAAAC+CGG | 0.459612 | 3.3:+84188357 | None:intergenic |
| GTCGTCAACGTCGAAGTTGG+TGG | 0.460565 | 3.3:-84190476 | MS.gene38714:CDS |
| TACCAGTCTCAATATCAAAC+TGG | 0.462015 | 3.3:+84190356 | None:intergenic |
| GGGAACCACGGATACCTACT+TGG | 0.466150 | 3.3:-84189915 | MS.gene38714:CDS |
| ACTGCTACAAGATAGTTCTC+AGG | 0.467624 | 3.3:-84188400 | MS.gene38714:CDS |
| CACCAGTTTGATATTGAGAC+TGG | 0.469746 | 3.3:-84190358 | MS.gene38714:CDS |
| CAAGCTTAAAGTTTATGGTA+AGG | 0.473983 | 3.3:-84190776 | MS.gene38714:CDS |
| GATAAAGCTTAACGGCGTTA+GGG | 0.483757 | 3.3:+84191160 | None:intergenic |
| TTTGATGGAAAGTGGATTGT+GGG | 0.483918 | 3.3:-84189935 | MS.gene38714:CDS |
| CTGGATAACAGTTTCTTGGT+TGG | 0.484278 | 3.3:-84190580 | MS.gene38714:CDS |
| ATCGACTCATCAGCAACTTC+CGG | 0.493994 | 3.3:+84190733 | None:intergenic |
| AGGTGCTCAATTGGATCCAT+CGG | 0.499935 | 3.3:-84190260 | MS.gene38714:CDS |
| GGGATTCAGAGCTTGGCGCT+TGG | 0.500399 | 3.3:-84190607 | MS.gene38714:CDS |
| GAAACAGGAGCGACATATAG+TGG | 0.501405 | 3.3:-84188519 | MS.gene38714:CDS |
| TTTGTTAAAACTCGTTGTGT+TGG | 0.501731 | 3.3:-84191072 | MS.gene38714:CDS |
| ACCTGTGTTGAATTGGGCAC+AGG | 0.504500 | 3.3:-84190131 | MS.gene38714:CDS |
| AACTTTCAACAGGTCAAAGA+TGG | 0.509696 | 3.3:-84188467 | MS.gene38714:CDS |
| TTCTATCAACTCTATGAGGC+AGG | 0.509976 | 3.3:-84190011 | MS.gene38714:CDS |
| TAACTCAGGTGACAGAGAAC+GGG | 0.510547 | 3.3:-84188541 | MS.gene38714:intron |
| CGTGATATGGAACTTTCAAC+AGG | 0.512894 | 3.3:-84188477 | MS.gene38714:CDS |
| AAATCCTGACTCGCTCTCAC+TGG | 0.513396 | 3.3:+84190661 | None:intergenic |
| GTTAAAACTCGTTGTGTTGG+TGG | 0.515711 | 3.3:-84191069 | MS.gene38714:CDS |
| CTTCTCAAAGAGTCCTGGTT+CGG | 0.515826 | 3.3:-84190689 | MS.gene38714:CDS |
| GATGTGAAGATAAAGCTTAA+CGG | 0.516648 | 3.3:+84191152 | None:intergenic |
| GCTATAACCAATGGAGCCTC+AGG | 0.517226 | 3.3:+84188320 | None:intergenic |
| AAATGGTGGGATTCAGAGCT+TGG | 0.518256 | 3.3:-84190614 | MS.gene38714:CDS |
| CTGGTAAGGTTGTGACTGAA+TGG | 0.518627 | 3.3:-84190339 | MS.gene38714:CDS |
| AGCAGCTCTTTAGACCCTGT+TGG | 0.519333 | 3.3:+84188423 | None:intergenic |
| GGGTTGAGCTTGAGCAACCT+TGG | 0.528839 | 3.3:+84189809 | None:intergenic |
| TCTTTAGACCCTGTTGGCTG+CGG | 0.528936 | 3.3:+84188429 | None:intergenic |
| GAGTACACCTGTGTTGAATT+GGG | 0.529176 | 3.3:-84190137 | MS.gene38714:CDS |
| GATATCACCAATGATAGTAA+AGG | 0.529897 | 3.3:-84190280 | MS.gene38714:CDS |
| GTAACAGGTGAACCAAGTCC+AGG | 0.531965 | 3.3:+84189974 | None:intergenic |
| CCCATCTTTATCGGTAAACA+CGG | 0.532444 | 3.3:+84189880 | None:intergenic |
| TGATAATAGGCTTTGTAGGT+GGG | 0.532793 | 3.3:-84190215 | MS.gene38714:CDS |
| TGCTTTGCTACAACTGGTGA+TGG | 0.537885 | 3.3:-84190076 | MS.gene38714:CDS |
| GTTTGATATTGAGACTGGTA+AGG | 0.537909 | 3.3:-84190353 | MS.gene38714:CDS |
| ATGATAATAGGCTTTGTAGG+TGG | 0.540329 | 3.3:-84190216 | MS.gene38714:CDS |
| GTGGCGCTCACAGCCGCGAC+GGG | 0.543026 | 3.3:-84191356 | MS.gene38714:CDS |
| TTCGTCGTCAACGTCGAAGT+TGG | 0.543148 | 3.3:-84190479 | MS.gene38714:CDS |
| GAGAGCGAGTCAGGATTTGA+AGG | 0.543944 | 3.3:-84190656 | MS.gene38714:CDS |
| CATAAACCGGCTTTCAACGA+TGG | 0.548519 | 3.3:+84188370 | None:intergenic |
| GGTGCTCAATTGGATCCATC+GGG | 0.552449 | 3.3:-84190259 | MS.gene38714:CDS |
| ATGACTCCATCGTTGAAAGC+CGG | 0.555694 | 3.3:-84188376 | MS.gene38714:CDS |
| TGCAGTCACTGATTCTCCTG+AGG | 0.556545 | 3.3:-84188336 | MS.gene38714:CDS |
| GAATTTGAGGAAGCTGCAAA+TGG | 0.557267 | 3.3:-84190631 | MS.gene38714:CDS |
| GATAGCTTCTCAAAGAGTCC+TGG | 0.557892 | 3.3:-84190694 | MS.gene38714:CDS |
| GGTGGCGCTCACAGCCGCGA+CGG | 0.558055 | 3.3:-84191357 | MS.gene38714:CDS |
| GTAACTCAGGTGACAGAGAA+CGG | 0.558922 | 3.3:-84188542 | MS.gene38714:intron |
| TGGGATATGCGTGACCGTCA+TGG | 0.562375 | 3.3:-84190196 | MS.gene38714:CDS |
| CCACACGACGCTGATCAGCT+AGG | 0.566231 | 3.3:+84190923 | None:intergenic |
| AAGCTTTATCTTCACATCGG+TGG | 0.566382 | 3.3:-84191147 | MS.gene38714:CDS |
| ACAGGGTCATCAGTTCTCTA+GGG | 0.567805 | 3.3:-84190113 | MS.gene38714:CDS |
| CCGTGTTTACCGATAAAGAT+GGG | 0.570042 | 3.3:-84189880 | MS.gene38714:CDS |
| TGGACTCATCAAAAGCATGC+TGG | 0.574141 | 3.3:+84190414 | None:intergenic |
| TTGAGGAAGCTGCAAATGGT+GGG | 0.574795 | 3.3:-84190627 | MS.gene38714:CDS |
| AAAATTAGGTCAAAAGTTGG+TGG | 0.576478 | 3.3:-84190964 | MS.gene38714:CDS |
| TGTATTCTATCAACTCTATG+AGG | 0.576757 | 3.3:-84190015 | MS.gene38714:CDS |
| TGGTGATGATGATGCTGATG+AGG | 0.577578 | 3.3:-84191013 | MS.gene38714:CDS |
| CACACGACGCTGATCAGCTA+GGG | 0.578249 | 3.3:+84190924 | None:intergenic |
| ATTGGGGTAGCTATAACCAA+TGG | 0.579247 | 3.3:+84188311 | None:intergenic |
| TTTGAGGAAGCTGCAAATGG+TGG | 0.581584 | 3.3:-84190628 | MS.gene38714:CDS |
| CACGAATTATCATCGCCTGT+TGG | 0.582299 | 3.3:+84188265 | None:intergenic |
| GAATGGAGATTTGGTAAGGA+TGG | 0.582473 | 3.3:-84190322 | MS.gene38714:CDS |
| CCTGTGTTGAATTGGGCACA+GGG | 0.583531 | 3.3:-84190130 | MS.gene38714:CDS |
| GACTGAATGGAGATTTGGTA+AGG | 0.586216 | 3.3:-84190326 | MS.gene38714:CDS |
| AGGTGAACCAAGTCCAGGAA+AGG | 0.590450 | 3.3:+84189979 | None:intergenic |
| GAAATAATATTGCTGCTCCA+AGG | 0.591970 | 3.3:-84189826 | MS.gene38714:CDS |
| TGGTTCACCTGTTACTAATG+TGG | 0.593720 | 3.3:-84189966 | MS.gene38714:CDS |
| CCAAGAAAAGTTGAACCCGA+TGG | 0.594621 | 3.3:+84190244 | None:intergenic |
| CTGCTACAAGATAGTTCTCA+GGG | 0.595736 | 3.3:-84188399 | MS.gene38714:CDS |
| AACTGGGATTCATGGAAAAG+GGG | 0.604100 | 3.3:-84190524 | MS.gene38714:CDS |
| GGTGATGATGATGCTGATGA+GGG | 0.605562 | 3.3:-84191012 | MS.gene38714:CDS |
| ACCGTGTTTACCGATAAAGA+TGG | 0.608326 | 3.3:-84189881 | MS.gene38714:CDS |
| GCGACATATAGTGGCTACTG+TGG | 0.614582 | 3.3:-84188510 | MS.gene38714:CDS |
| GATTGTTACCGCAGCCAACA+GGG | 0.615563 | 3.3:-84188437 | MS.gene38714:CDS |
| CTGACTCGCTCTCACTGGCG+TGG | 0.617306 | 3.3:+84190666 | None:intergenic |
| AACAACCAAGTAGGTATCCG+TGG | 0.621225 | 3.3:+84189910 | None:intergenic |
| GTTAAGCTTTATCTTCACAT+CGG | 0.621435 | 3.3:-84191150 | MS.gene38714:CDS |
| CCTAGCTGATCAGCGTCGTG+TGG | 0.621735 | 3.3:-84190923 | MS.gene38714:CDS |
| GACGAAGATGAAGAAGAAGA+TGG | 0.623172 | 3.3:-84191033 | MS.gene38714:CDS |
| TCAACTTCATCTACAGATGA+CGG | 0.624942 | 3.3:+84191231 | None:intergenic |
| CCAGCAAGATGCGAATCAAG+AGG | 0.625035 | 3.3:+84189788 | None:intergenic |
| CCCTGTGCCCAATTCAACAC+AGG | 0.635628 | 3.3:+84190130 | None:intergenic |
| CAGCAAGATGCGAATCAAGA+GGG | 0.636555 | 3.3:+84189789 | None:intergenic |
| GGTACAGATAACAACCAAGT+AGG | 0.636628 | 3.3:+84189901 | None:intergenic |
| AACTTTCGAGTAACCCGTCG+CGG | 0.640215 | 3.3:+84191343 | None:intergenic |
| CGACATATAGTGGCTACTGT+GGG | 0.641076 | 3.3:-84188509 | MS.gene38714:CDS |
| AGCGAGTCAGGATTTGAAGG+AGG | 0.643541 | 3.3:-84190653 | MS.gene38714:CDS |
| TGAACCAAGTCCAGGAAAGG+CGG | 0.656718 | 3.3:+84189982 | None:intergenic |
| AAAGTGGATTGTGGGAACCA+CGG | 0.666086 | 3.3:-84189927 | MS.gene38714:CDS |
| AACTACGAAGATGCAAACGA+AGG | 0.673113 | 3.3:-84191282 | MS.gene38714:CDS |
| AAAATAAACTTCATTCAACA+GGG | 0.674447 | 3.3:-84190384 | MS.gene38714:CDS |
| AGTTGCTGATGAGTCGATGT+GGG | 0.683396 | 3.3:-84190728 | MS.gene38714:CDS |
| GATCCTGAACTATTCCATGA+CGG | 0.683919 | 3.3:+84190182 | None:intergenic |
| GAATGAGCTAACTTTCATTG+GGG | 0.698456 | 3.3:+84188295 | None:intergenic |
| AAGTTGCTGATGAGTCGATG+TGG | 0.703498 | 3.3:-84190729 | MS.gene38714:CDS |
| CAGGGTCATCAGTTCTCTAG+GGG | 0.709385 | 3.3:-84190112 | MS.gene38714:CDS |
| AGGGTCATCAGTTCTCTAGG+GGG | 0.723930 | 3.3:-84190111 | MS.gene38714:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGAGGTAAAATTATT+AGG | + | chr3.3:84190313-84190332 | None:intergenic | 15.0% |
| !!! | ACATTTACTATTGATAATAT+TGG | - | chr3.3:84190236-84190255 | MS.gene38714:CDS | 15.0% |
| !!! | CATTTACTATTGATAATATT+GGG | - | chr3.3:84190237-84190256 | MS.gene38714:CDS | 15.0% |
| !!! | TTATAATGAATTTAACTTCT+TGG | - | chr3.3:84191070-84191089 | MS.gene38714:CDS | 15.0% |
| !! | AAAATAAACTTCATTCAACA+GGG | - | chr3.3:84189250-84189269 | MS.gene38714:intron | 20.0% |
| !! | AAATTATTAGGTGAAAACAT+AGG | + | chr3.3:84190301-84190320 | None:intergenic | 20.0% |
| !! | AAGATACTTTCTTTAGATAA+TGG | + | chr3.3:84190038-84190057 | None:intergenic | 20.0% |
| !! | AGATACTTTCTTTAGATAAT+GGG | + | chr3.3:84190037-84190056 | None:intergenic | 20.0% |
| !!! | AAAACAGAGATTTTATAGTT+TGG | - | chr3.3:84190938-84190957 | MS.gene38714:CDS | 20.0% |
| !!! | TGAAAATTGGTTCAAAAATT+AGG | - | chr3.3:84188656-84188675 | MS.gene38714:intron | 20.0% |
| !!! | TTTGAAATTATGTTCTGTAT+TGG | - | chr3.3:84190428-84190447 | MS.gene38714:CDS | 20.0% |
| ! | AAAGATGGGAAAACTAAAAA+TGG | - | chr3.3:84189768-84189787 | MS.gene38714:CDS | 25.0% |
| ! | AATACAGTTTAGTCATCTTA+AGG | - | chr3.3:84190714-84190733 | MS.gene38714:CDS | 25.0% |
| ! | CTATAAAACCGATAAGATTA+CGG | + | chr3.3:84190894-84190913 | None:intergenic | 25.0% |
| ! | GAAAATAAACTTCATTCAAC+AGG | - | chr3.3:84189249-84189268 | MS.gene38714:intron | 25.0% |
| ! | GTCTTGTAAATTAAGAATGA+TGG | - | chr3.3:84189953-84189972 | MS.gene38714:CDS | 25.0% |
| ! | TCAAAAATTAGGTCAAAAGT+TGG | - | chr3.3:84188667-84188686 | MS.gene38714:intron | 25.0% |
| !! | AGATGACTAAACTGTATTTT+AGG | + | chr3.3:84190712-84190731 | None:intergenic | 25.0% |
| !! | ATTTTCTTCGTATTCTTCAT+CGG | + | chr3.3:84188317-84188336 | None:intergenic | 25.0% |
| !! | CTATTGACATCTTATTTGAA+TGG | - | chr3.3:84190772-84190791 | MS.gene38714:CDS | 25.0% |
| !! | TAATTTCATTTTGCGAATTG+AGG | - | chr3.3:84190356-84190375 | MS.gene38714:CDS | 25.0% |
| !! | TTTATGGTAAGGATTTTCTT+GGG | - | chr3.3:84188869-84188888 | MS.gene38714:intron | 25.0% |
| !!! | AAAACTAAAAATGGTTTTGC+TGG | - | chr3.3:84189777-84189796 | MS.gene38714:CDS | 25.0% |
| !!! | AACTGTATTTTAGGAAAAGA+AGG | + | chr3.3:84190703-84190722 | None:intergenic | 25.0% |
| !!! | ACTGTATTTTAGGAAAAGAA+GGG | + | chr3.3:84190702-84190721 | None:intergenic | 25.0% |
| !!! | TAATCTTATCGGTTTTATAG+TGG | - | chr3.3:84190894-84190913 | MS.gene38714:CDS | 25.0% |
| !!! | TTTAGTTTTCCCATCTTTAT+CGG | + | chr3.3:84189766-84189785 | None:intergenic | 25.0% |
| AAAATTAGGTCAAAAGTTGG+TGG | - | chr3.3:84188670-84188689 | MS.gene38714:intron | 30.0% | |
| AAGAAAAACAAAAGAGAAGC+AGG | + | chr3.3:84190583-84190602 | None:intergenic | 30.0% | |
| AAGAACAATACAGCAAGTTA+TGG | + | chr3.3:84190337-84190356 | None:intergenic | 30.0% | |
| AGCAAGTTATGGAAAATAAG+AGG | + | chr3.3:84190326-84190345 | None:intergenic | 30.0% | |
| ATAATGCAATGCTATTGATG+TGG | + | chr3.3:84190210-84190229 | None:intergenic | 30.0% | |
| CAAGCTTAAAGTTTATGGTA+AGG | - | chr3.3:84188858-84188877 | MS.gene38714:intron | 30.0% | |
| CTTAATTTACAAGACAACAG+TGG | + | chr3.3:84189948-84189967 | None:intergenic | 30.0% | |
| GAGAACAAGCTTAAAGTTTA+TGG | - | chr3.3:84188853-84188872 | MS.gene38714:intron | 30.0% | |
| GATATCACCAATGATAGTAA+AGG | - | chr3.3:84189354-84189373 | MS.gene38714:intron | 30.0% | |
| GATGTGAAGATAAAGCTTAA+CGG | + | chr3.3:84188485-84188504 | None:intergenic | 30.0% | |
| TAGTGAGTGAAGAAATTGAT+GGG | + | chr3.3:84190556-84190575 | None:intergenic | 30.0% | |
| TCAATGCATGATAGCATATT+TGG | + | chr3.3:84190403-84190422 | None:intergenic | 30.0% | |
| TGAATGAGCTAACTTTCATT+GGG | + | chr3.3:84191343-84191362 | None:intergenic | 30.0% | |
| TGTATTCTATCAACTCTATG+AGG | - | chr3.3:84189619-84189638 | MS.gene38714:intron | 30.0% | |
| TTAGTGAGTGAAGAAATTGA+TGG | + | chr3.3:84190557-84190576 | None:intergenic | 30.0% | |
| TTTGTTAAAACTCGTTGTGT+TGG | - | chr3.3:84188562-84188581 | MS.gene38714:intron | 30.0% | |
| ! | AATGTGGATGTAACTTTTGA+TGG | - | chr3.3:84189684-84189703 | MS.gene38714:intron | 30.0% |
| ! | ATGTAACTTTTGATGGAAAG+TGG | - | chr3.3:84189691-84189710 | MS.gene38714:intron | 30.0% |
| ! | ATTTAACTTCTTGGTAACTC+AGG | - | chr3.3:84191079-84191098 | MS.gene38714:CDS | 30.0% |
| ! | GTTAAGCTTTATCTTCACAT+CGG | - | chr3.3:84188484-84188503 | MS.gene38714:CDS | 30.0% |
| ! | GTTTATGGTAAGGATTTTCT+TGG | - | chr3.3:84188868-84188887 | MS.gene38714:intron | 30.0% |
| ! | TATGCTGTAACATGTGTTTT+CGG | - | chr3.3:84190057-84190076 | MS.gene38714:CDS | 30.0% |
| ! | TTCTTGGATTGGATGATAAT+AGG | - | chr3.3:84189406-84189425 | MS.gene38714:intron | 30.0% |
| ! | TTGTGAAGAATTTTGCAACT+GGG | - | chr3.3:84189094-84189113 | MS.gene38714:intron | 30.0% |
| !! | CTGTATTTTAGGAAAAGAAG+GGG | + | chr3.3:84190701-84190720 | None:intergenic | 30.0% |
| !! | TGAAGTTTATTTTCACCCAA+TGG | + | chr3.3:84189243-84189262 | None:intergenic | 30.0% |
| !! | TGTATTTTAGGAAAAGAAGG+GGG | + | chr3.3:84190700-84190719 | None:intergenic | 30.0% |
| !!! | GGTTTTTGGGTTTTGAAAAT+TGG | - | chr3.3:84188643-84188662 | MS.gene38714:intron | 30.0% |
| AAACCGATAAGATTACGGAT+TGG | + | chr3.3:84190889-84190908 | None:intergenic | 35.0% | |
| AACAGACACAATCAAATTGC+AGG | + | chr3.3:84190983-84191002 | None:intergenic | 35.0% | |
| AACTTTCAACAGGTCAAAGA+TGG | - | chr3.3:84191167-84191186 | MS.gene38714:CDS | 35.0% | |
| AGTCCAATCCGTAATCTTAT+CGG | - | chr3.3:84190883-84190902 | MS.gene38714:CDS | 35.0% | |
| AGTGAGTGAAGAAATTGATG+GGG | + | chr3.3:84190555-84190574 | None:intergenic | 35.0% | |
| ATAGAAATATCCCAGAGTCT+TGG | - | chr3.3:84190515-84190534 | MS.gene38714:CDS | 35.0% | |
| CAATGCATGTGTTAGGTTTA+GGG | + | chr3.3:84190744-84190763 | None:intergenic | 35.0% | |
| CTGAATGAGCTAACTTTCAT+TGG | + | chr3.3:84191344-84191363 | None:intergenic | 35.0% | |
| GAAAGTTCAATGCATGTGTT+AGG | + | chr3.3:84190751-84190770 | None:intergenic | 35.0% | |
| GAAATAATATTGCTGCTCCA+AGG | - | chr3.3:84189808-84189827 | MS.gene38714:CDS | 35.0% | |
| GAATGAGCTAACTTTCATTG+GGG | + | chr3.3:84191342-84191361 | None:intergenic | 35.0% | |
| GATGAAATTCTTTACGGAAC+AGG | - | chr3.3:84188759-84188778 | MS.gene38714:intron | 35.0% | |
| GGTGTAAAATAAGGTTGGAA+GGG | + | chr3.3:84190663-84190682 | None:intergenic | 35.0% | |
| GTTACATCCACATTAGTAAC+AGG | + | chr3.3:84189678-84189697 | None:intergenic | 35.0% | |
| GTTCTTTGGATGGAAAGATT+CGG | - | chr3.3:84189595-84189614 | MS.gene38714:intron | 35.0% | |
| GTTTGATATTGAGACTGGTA+AGG | - | chr3.3:84189281-84189300 | MS.gene38714:intron | 35.0% | |
| TACCAGTCTCAATATCAAAC+TGG | + | chr3.3:84189281-84189300 | None:intergenic | 35.0% | |
| TCAACTTCATCTACAGATGA+CGG | + | chr3.3:84188406-84188425 | None:intergenic | 35.0% | |
| TCAATGCATGTGTTAGGTTT+AGG | + | chr3.3:84190745-84190764 | None:intergenic | 35.0% | |
| TGATAGCATATTTGGCTAAC+AGG | + | chr3.3:84190395-84190414 | None:intergenic | 35.0% | |
| TTGAGCACCTTTACTATCAT+TGG | + | chr3.3:84189364-84189383 | None:intergenic | 35.0% | |
| TTGCATCTTCTGTATTCTTG+TGG | - | chr3.3:84191038-84191057 | MS.gene38714:CDS | 35.0% | |
| TTGGGCGATGAAATTCTTTA+CGG | - | chr3.3:84188753-84188772 | MS.gene38714:intron | 35.0% | |
| ! | AAAGGGGCTTTTGTTAACTT+TGG | - | chr3.3:84189126-84189145 | MS.gene38714:intron | 35.0% |
| ! | AAATTACCCATTTTGCGTTG+GGG | + | chr3.3:84188519-84188538 | None:intergenic | 35.0% |
| ! | AATTTTGCAACTGGGATTCA+TGG | - | chr3.3:84189102-84189121 | MS.gene38714:intron | 35.0% |
| ! | AGAAATTACCCATTTTGCGT+TGG | + | chr3.3:84188521-84188540 | None:intergenic | 35.0% |
| ! | ATGATAATAGGCTTTGTAGG+TGG | - | chr3.3:84189418-84189437 | MS.gene38714:intron | 35.0% |
| ! | ATGCTGTAACATGTGTTTTC+GGG | - | chr3.3:84190058-84190077 | MS.gene38714:CDS | 35.0% |
| ! | ATGCTTTTGATGAGTCCATT+GGG | - | chr3.3:84189225-84189244 | MS.gene38714:intron | 35.0% |
| ! | GAAATTACCCATTTTGCGTT+GGG | + | chr3.3:84188520-84188539 | None:intergenic | 35.0% |
| ! | GTTGTGAAGAATTTTGCAAC+TGG | - | chr3.3:84189093-84189112 | MS.gene38714:intron | 35.0% |
| ! | TAGAGTAGGGGTGTAAAATA+AGG | + | chr3.3:84190672-84190691 | None:intergenic | 35.0% |
| ! | TGATAATAGGCTTTGTAGGT+GGG | - | chr3.3:84189419-84189438 | MS.gene38714:intron | 35.0% |
| ! | TGGATGATAATAGGCTTTGT+AGG | - | chr3.3:84189415-84189434 | MS.gene38714:intron | 35.0% |
| !! | AAATGGTTTTGCTGGTAGAA+TGG | - | chr3.3:84189785-84189804 | MS.gene38714:CDS | 35.0% |
| !! | AACACATTTTTCAGCAGATG+TGG | + | chr3.3:84191012-84191031 | None:intergenic | 35.0% |
| !! | AAGCTTAAGAGCTTTGAGTT+TGG | + | chr3.3:84188431-84188450 | None:intergenic | 35.0% |
| !! | AATGGTTTTGCTGGTAGAAT+GGG | - | chr3.3:84189786-84189805 | MS.gene38714:CDS | 35.0% |
| !! | AGTTTCTTGGTTGGTGAAAA+TGG | - | chr3.3:84189063-84189082 | MS.gene38714:intron | 35.0% |
| !! | GTACTTTTGAGAATACGCAT+GGG | - | chr3.3:84188815-84188834 | MS.gene38714:intron | 35.0% |
| !! | TCTTGTATCGATTCAGTAGA+TGG | - | chr3.3:84190268-84190287 | MS.gene38714:CDS | 35.0% |
| !! | TGATAGTAAAGGTGCTCAAT+TGG | - | chr3.3:84189365-84189384 | MS.gene38714:intron | 35.0% |
| !! | TGTACTTTTGAGAATACGCA+TGG | - | chr3.3:84188814-84188833 | MS.gene38714:intron | 35.0% |
| !! | TTCTGTTGTTGTTGGTTCTT+TGG | - | chr3.3:84189581-84189600 | MS.gene38714:intron | 35.0% |
| !! | TTTGATGGAAAGTGGATTGT+GGG | - | chr3.3:84189699-84189718 | MS.gene38714:intron | 35.0% |
| !!! | ATTTTATCGCGAAAGGTGTT+TGG | - | chr3.3:84188734-84188753 | MS.gene38714:intron | 35.0% |
| !!! | TTCATGAGAAGCGTTTTCTT+AGG | + | chr3.3:84189192-84189211 | None:intergenic | 35.0% |
| !!! | TTTTATCGCGAAAGGTGTTT+GGG | - | chr3.3:84188735-84188754 | MS.gene38714:intron | 35.0% |
| !!! | TTTTGATGGAAAGTGGATTG+TGG | - | chr3.3:84189698-84189717 | MS.gene38714:intron | 35.0% |
| AACTACGAAGATGCAAACGA+AGG | - | chr3.3:84188352-84188371 | MS.gene38714:CDS | 40.0% | |
| AACTGGGATTCATGGAAAAG+GGG | - | chr3.3:84189110-84189129 | MS.gene38714:intron | 40.0% | |
| AATAGTAGAAGCTGTCTGCT+TGG | - | chr3.3:84190475-84190494 | MS.gene38714:CDS | 40.0% | |
| ACCGTGTTTACCGATAAAGA+TGG | - | chr3.3:84189753-84189772 | MS.gene38714:CDS | 40.0% | |
| ACTGCTACAAGATAGTTCTC+AGG | - | chr3.3:84191234-84191253 | MS.gene38714:CDS | 40.0% | |
| AGATAAAGCTTAACGGCGTT+AGG | + | chr3.3:84188478-84188497 | None:intergenic | 40.0% | |
| ATTGGGGTAGCTATAACCAA+TGG | + | chr3.3:84191326-84191345 | None:intergenic | 40.0% | |
| CAAACTTGTCGTGCATAAAC+CGG | + | chr3.3:84191280-84191299 | None:intergenic | 40.0% | |
| CAACACAGGTGTACTCATAT+TGG | + | chr3.3:84189493-84189512 | None:intergenic | 40.0% | |
| CAACTGGGATTCATGGAAAA+GGG | - | chr3.3:84189109-84189128 | MS.gene38714:intron | 40.0% | |
| CACCAGTTTGATATTGAGAC+TGG | - | chr3.3:84189276-84189295 | MS.gene38714:intron | 40.0% | |
| CCCATCTTTATCGGTAAACA+CGG | + | chr3.3:84189757-84189776 | None:intergenic | 40.0% | |
| CCGTGTTTACCGATAAAGAT+GGG | - | chr3.3:84189754-84189773 | MS.gene38714:CDS | 40.0% | |
| CGTGATATGGAACTTTCAAC+AGG | - | chr3.3:84191157-84191176 | MS.gene38714:CDS | 40.0% | |
| CTGCTACAAGATAGTTCTCA+GGG | - | chr3.3:84191235-84191254 | MS.gene38714:CDS | 40.0% | |
| CTGGATAACAGTTTCTTGGT+TGG | - | chr3.3:84189054-84189073 | MS.gene38714:intron | 40.0% | |
| GAATTTGAGGAAGCTGCAAA+TGG | - | chr3.3:84189003-84189022 | MS.gene38714:intron | 40.0% | |
| GACGAAGATGAAGAAGAAGA+TGG | - | chr3.3:84188601-84188620 | MS.gene38714:intron | 40.0% | |
| GAGTACACCTGTGTTGAATT+GGG | - | chr3.3:84189497-84189516 | MS.gene38714:intron | 40.0% | |
| GATAAAGCTTAACGGCGTTA+GGG | + | chr3.3:84188477-84188496 | None:intergenic | 40.0% | |
| GATCCTGAACTATTCCATGA+CGG | + | chr3.3:84189455-84189474 | None:intergenic | 40.0% | |
| GGATTTGAAGGAGGAATTTG+AGG | - | chr3.3:84188990-84189009 | MS.gene38714:intron | 40.0% | |
| GGGTGTAAAATAAGGTTGGA+AGG | + | chr3.3:84190664-84190683 | None:intergenic | 40.0% | |
| GGTACAGATAACAACCAAGT+AGG | + | chr3.3:84189736-84189755 | None:intergenic | 40.0% | |
| GTGAGTGAAGAAATTGATGG+GGG | + | chr3.3:84190554-84190573 | None:intergenic | 40.0% | |
| GTTAAAACTCGTTGTGTTGG+TGG | - | chr3.3:84188565-84188584 | MS.gene38714:intron | 40.0% | |
| GTTGTGACTGAATGGAGATT+TGG | - | chr3.3:84189303-84189322 | MS.gene38714:intron | 40.0% | |
| TAATTCCCCCAACGCAAAAT+GGG | - | chr3.3:84188510-84188529 | MS.gene38714:CDS | 40.0% | |
| TGAGTACACCTGTGTTGAAT+TGG | - | chr3.3:84189496-84189515 | MS.gene38714:intron | 40.0% | |
| TGGTTCACCTGTTACTAATG+TGG | - | chr3.3:84189668-84189687 | MS.gene38714:intron | 40.0% | |
| TTCTATCAACTCTATGAGGC+AGG | - | chr3.3:84189623-84189642 | MS.gene38714:intron | 40.0% | |
| TTTCAGTGCTTTGCTACAAC+TGG | - | chr3.3:84189552-84189571 | MS.gene38714:intron | 40.0% | |
| ! | AAGCTTTATCTTCACATCGG+TGG | - | chr3.3:84188487-84188506 | MS.gene38714:CDS | 40.0% |
| ! | AATTACCCATTTTGCGTTGG+GGG | + | chr3.3:84188518-84188537 | None:intergenic | 40.0% |
| ! | ATGATGCTGATGAGGGTTTT+TGG | - | chr3.3:84188629-84188648 | MS.gene38714:intron | 40.0% |
| ! | ATGGTAAGGATTTTCTTGGG+TGG | - | chr3.3:84188872-84188891 | MS.gene38714:intron | 40.0% |
| ! | CATGCTTTTGATGAGTCCAT+TGG | - | chr3.3:84189224-84189243 | MS.gene38714:intron | 40.0% |
| ! | CCAAAAAGCTCAGTTTTCGT+GGG | - | chr3.3:84189884-84189903 | MS.gene38714:CDS | 40.0% |
| ! | GAATGGAGATTTGGTAAGGA+TGG | - | chr3.3:84189312-84189331 | MS.gene38714:intron | 40.0% |
| ! | GACTGAATGGAGATTTGGTA+AGG | - | chr3.3:84189308-84189327 | MS.gene38714:intron | 40.0% |
| ! | GCTTTTGTTAACTTTGGTGG+TGG | - | chr3.3:84189132-84189151 | MS.gene38714:intron | 40.0% |
| ! | GGGTTCAACTTTTCTTGGAT+TGG | - | chr3.3:84189395-84189414 | MS.gene38714:intron | 40.0% |
| ! | GTAGGGGTGTAAAATAAGGT+TGG | + | chr3.3:84190668-84190687 | None:intergenic | 40.0% |
| ! | TCCAAAAAGCTCAGTTTTCG+TGG | - | chr3.3:84189883-84189902 | MS.gene38714:CDS | 40.0% |
| ! | TGATGCTGATGAGGGTTTTT+GGG | - | chr3.3:84188630-84188649 | MS.gene38714:intron | 40.0% |
| ! | TGCTCTGGATAACAGTTTCT+TGG | - | chr3.3:84189050-84189069 | MS.gene38714:intron | 40.0% |
| ! | TGGTAAGGATTTTCTTGGGT+GGG | - | chr3.3:84188873-84188892 | MS.gene38714:intron | 40.0% |
| !! | ACGGATTGGACTCTTAGTAA+GGG | + | chr3.3:84190875-84190894 | None:intergenic | 40.0% |
| !! | GGTTGGTGAAAATGGTATTC+AGG | - | chr3.3:84189071-84189090 | MS.gene38714:intron | 40.0% |
| !! | GTTGTTGTTGGTTCTTTGGA+TGG | - | chr3.3:84189585-84189604 | MS.gene38714:intron | 40.0% |
| !! | TACGGATTGGACTCTTAGTA+AGG | + | chr3.3:84190876-84190895 | None:intergenic | 40.0% |
| AACAACCAAGTAGGTATCCG+TGG | + | chr3.3:84189727-84189746 | None:intergenic | 45.0% | |
| AAGTTGCTGATGAGTCGATG+TGG | - | chr3.3:84188905-84188924 | MS.gene38714:intron | 45.0% | |
| AATATCCCAGAGTCTTGGAG+AGG | - | chr3.3:84190520-84190539 | MS.gene38714:CDS | 45.0% | |
| ACAGCCTAAAGGTGGTAGAA+AGG | + | chr3.3:84190628-84190647 | None:intergenic | 45.0% | |
| ACAGGGTCATCAGTTCTCTA+GGG | - | chr3.3:84189521-84189540 | MS.gene38714:intron | 45.0% | |
| AGCCTAAAGGTGGTAGAAAG+GGG | + | chr3.3:84190626-84190645 | None:intergenic | 45.0% | |
| AGGTGCTCAATTGGATCCAT+CGG | - | chr3.3:84189374-84189393 | MS.gene38714:intron | 45.0% | |
| AGTTGCTGATGAGTCGATGT+GGG | - | chr3.3:84188906-84188925 | MS.gene38714:intron | 45.0% | |
| ATGACTCCATCGTTGAAAGC+CGG | - | chr3.3:84191258-84191277 | MS.gene38714:CDS | 45.0% | |
| CAGCAAGATGCGAATCAAGA+GGG | + | chr3.3:84189848-84189867 | None:intergenic | 45.0% | |
| CAGCCTAAAGGTGGTAGAAA+GGG | + | chr3.3:84190627-84190646 | None:intergenic | 45.0% | |
| CCAAGAAAAGTTGAACCCGA+TGG | + | chr3.3:84189393-84189412 | None:intergenic | 45.0% | |
| CGACATATAGTGGCTACTGT+GGG | - | chr3.3:84191125-84191144 | MS.gene38714:CDS | 45.0% | |
| CTGGTAAGGTTGTGACTGAA+TGG | - | chr3.3:84189295-84189314 | MS.gene38714:intron | 45.0% | |
| CTTCTCAAAGAGTCCTGGTT+CGG | - | chr3.3:84188945-84188964 | MS.gene38714:intron | 45.0% | |
| GAAACAGGAGCGACATATAG+TGG | - | chr3.3:84191115-84191134 | MS.gene38714:CDS | 45.0% | |
| GACTTCGAGTAACAGCCTAA+AGG | + | chr3.3:84190639-84190658 | None:intergenic | 45.0% | |
| GATAGCTTCTCAAAGAGTCC+TGG | - | chr3.3:84188940-84188959 | MS.gene38714:intron | 45.0% | |
| GCAACTGGGATTCATGGAAA+AGG | - | chr3.3:84189108-84189127 | MS.gene38714:intron | 45.0% | |
| GTAACTCAGGTGACAGAGAA+CGG | - | chr3.3:84191092-84191111 | MS.gene38714:CDS | 45.0% | |
| GTAATTCCCCCAACGCAAAA+TGG | - | chr3.3:84188509-84188528 | MS.gene38714:CDS | 45.0% | |
| TAACTCAGGTGACAGAGAAC+GGG | - | chr3.3:84191093-84191112 | MS.gene38714:CDS | 45.0% | |
| TGACCGTCATGGAATAGTTC+AGG | - | chr3.3:84189449-84189468 | MS.gene38714:intron | 45.0% | |
| TGCTTTGCTACAACTGGTGA+TGG | - | chr3.3:84189558-84189577 | MS.gene38714:intron | 45.0% | |
| TGGGAAAGTTCAGCGTGATA+TGG | - | chr3.3:84191144-84191163 | MS.gene38714:CDS | 45.0% | |
| TGTCTGCTTGGCAACAGAAT+AGG | - | chr3.3:84190487-84190506 | MS.gene38714:CDS | 45.0% | |
| TTCGAGTAACAGCCTAAAGG+TGG | + | chr3.3:84190636-84190655 | None:intergenic | 45.0% | |
| TTGAGGAAGCTGCAAATGGT+GGG | - | chr3.3:84189007-84189026 | MS.gene38714:intron | 45.0% | |
| TTTGAGGAAGCTGCAAATGG+TGG | - | chr3.3:84189006-84189025 | MS.gene38714:intron | 45.0% | |
| ! | AAATGGTGGGATTCAGAGCT+TGG | - | chr3.3:84189020-84189039 | MS.gene38714:intron | 45.0% |
| ! | ACTCGTTGTGTTGGTGGAAA+CGG | - | chr3.3:84188571-84188590 | MS.gene38714:intron | 45.0% |
| ! | ATCGACTCATCAGCAACTTC+CGG | + | chr3.3:84188904-84188923 | None:intergenic | 45.0% |
| ! | CATAAACCGGCTTTCAACGA+TGG | + | chr3.3:84191267-84191286 | None:intergenic | 45.0% |
| ! | CCATCGGGTTCAACTTTTCT+TGG | - | chr3.3:84189390-84189409 | MS.gene38714:intron | 45.0% |
| ! | CCCACGAAAACTGAGCTTTT+TGG | + | chr3.3:84189887-84189906 | None:intergenic | 45.0% |
| ! | CGTGTGGATTTTATCGCGAA+AGG | - | chr3.3:84188727-84188746 | MS.gene38714:intron | 45.0% |
| ! | GGGGCTTTTGTTAACTTTGG+TGG | - | chr3.3:84189129-84189148 | MS.gene38714:intron | 45.0% |
| ! | GGTGATGATGATGCTGATGA+GGG | - | chr3.3:84188622-84188641 | MS.gene38714:intron | 45.0% |
| ! | GGTGATGGTTCTGTTGTTGT+TGG | - | chr3.3:84189573-84189592 | MS.gene38714:intron | 45.0% |
| ! | TGGACTCATCAAAAGCATGC+TGG | + | chr3.3:84189223-84189242 | None:intergenic | 45.0% |
| ! | TGGTGATGATGATGCTGATG+AGG | - | chr3.3:84188621-84188640 | MS.gene38714:intron | 45.0% |
| !! | AAAGTGGATTGTGGGAACCA+CGG | - | chr3.3:84189707-84189726 | MS.gene38714:intron | 45.0% |
| AAAACCGCCTTTCCTGGACT+TGG | - | chr3.3:84189648-84189667 | MS.gene38714:intron | 50.0% | |
| ACCCCCTTTCTACCACCTTT+AGG | - | chr3.3:84190621-84190640 | MS.gene38714:CDS | 50.0% | |
| ACCTGTGTTGAATTGGGCAC+AGG | - | chr3.3:84189503-84189522 | MS.gene38714:intron | 50.0% | |
| AGCAGCTCTTTAGACCCTGT+TGG | + | chr3.3:84191214-84191233 | None:intergenic | 50.0% | |
| AGCGAGTCAGGATTTGAAGG+AGG | - | chr3.3:84188981-84189000 | MS.gene38714:intron | 50.0% | |
| AGGGTCATCAGTTCTCTAGG+GGG | - | chr3.3:84189523-84189542 | MS.gene38714:intron | 50.0% | |
| AGGTGAACCAAGTCCAGGAA+AGG | + | chr3.3:84189658-84189677 | None:intergenic | 50.0% | |
| CACAGGGTCATCAGTTCTCT+AGG | - | chr3.3:84189520-84189539 | MS.gene38714:intron | 50.0% | |
| CAGGGTCATCAGTTCTCTAG+GGG | - | chr3.3:84189522-84189541 | MS.gene38714:intron | 50.0% | |
| CCAGCAAGATGCGAATCAAG+AGG | + | chr3.3:84189849-84189868 | None:intergenic | 50.0% | |
| CCTGTGTTGAATTGGGCACA+GGG | - | chr3.3:84189504-84189523 | MS.gene38714:intron | 50.0% | |
| GAGAGCGAGTCAGGATTTGA+AGG | - | chr3.3:84188978-84188997 | MS.gene38714:intron | 50.0% | |
| GATTGTTACCGCAGCCAACA+GGG | - | chr3.3:84191197-84191216 | MS.gene38714:CDS | 50.0% | |
| GCCTAAAGGTGGTAGAAAGG+GGG | + | chr3.3:84190625-84190644 | None:intergenic | 50.0% | |
| GCGACATATAGTGGCTACTG+TGG | - | chr3.3:84191124-84191143 | MS.gene38714:CDS | 50.0% | |
| GCTATAACCAATGGAGCCTC+AGG | + | chr3.3:84191317-84191336 | None:intergenic | 50.0% | |
| GCTCATTCAGCATGTCCAAC+AGG | - | chr3.3:84191354-84191373 | MS.gene38714:CDS | 50.0% | |
| GGTGCTCAATTGGATCCATC+GGG | - | chr3.3:84189375-84189394 | MS.gene38714:intron | 50.0% | |
| GTAACAGGTGAACCAAGTCC+AGG | + | chr3.3:84189663-84189682 | None:intergenic | 50.0% | |
| TGAACCAAGTCCAGGAAAGG+CGG | + | chr3.3:84189655-84189674 | None:intergenic | 50.0% | |
| TGATTCTCCTGAGGCTCCAT+TGG | - | chr3.3:84191307-84191326 | MS.gene38714:CDS | 50.0% | |
| TGATTGTTACCGCAGCCAAC+AGG | - | chr3.3:84191196-84191215 | MS.gene38714:CDS | 50.0% | |
| TTCGTCGTCAACGTCGAAGT+TGG | - | chr3.3:84189155-84189174 | MS.gene38714:intron | 50.0% | |
| ! | AAATCCTGACTCGCTCTCAC+TGG | + | chr3.3:84188976-84188995 | None:intergenic | 50.0% |
| ! | AACTTTCGAGTAACCCGTCG+CGG | + | chr3.3:84188294-84188313 | None:intergenic | 50.0% |
| ! | AAGGGGGTGTAGTAGAGTAG+GGG | + | chr3.3:84190684-84190703 | None:intergenic | 50.0% |
| ! | AGAAGGGGGTGTAGTAGAGT+AGG | + | chr3.3:84190686-84190705 | None:intergenic | 50.0% |
| ! | CCTCTTGATTCGCATCTTGC+TGG | - | chr3.3:84189846-84189865 | MS.gene38714:CDS | 50.0% |
| ! | GAAGGGGGTGTAGTAGAGTA+GGG | + | chr3.3:84190685-84190704 | None:intergenic | 50.0% |
| ! | TCTTTAGACCCTGTTGGCTG+CGG | + | chr3.3:84191208-84191227 | None:intergenic | 50.0% |
| ! | TTTTCTTGGGTGGGCGAAAC+CGG | - | chr3.3:84188882-84188901 | MS.gene38714:intron | 50.0% |
| !! | AAAGGGGGTGTTGGAAGCAA+GGG | + | chr3.3:84190610-84190629 | None:intergenic | 50.0% |
| !! | TGCAGTCACTGATTCTCCTG+AGG | - | chr3.3:84191298-84191317 | MS.gene38714:CDS | 50.0% |
| CACACGACGCTGATCAGCTA+GGG | + | chr3.3:84188713-84188732 | None:intergenic | 55.0% | |
| CCATGCCTCTCCAAGACTCT+GGG | + | chr3.3:84190528-84190547 | None:intergenic | 55.0% | |
| CCCTGTGCCCAATTCAACAC+AGG | + | chr3.3:84189507-84189526 | None:intergenic | 55.0% | |
| GGGAACCACGGATACCTACT+TGG | - | chr3.3:84189719-84189738 | MS.gene38714:intron | 55.0% | |
| GGGTTGAGCTTGAGCAACCT+TGG | + | chr3.3:84189828-84189847 | None:intergenic | 55.0% | |
| GGTGACAGAGAACGGGAAAC+AGG | - | chr3.3:84191100-84191119 | MS.gene38714:CDS | 55.0% | |
| GTCGTCAACGTCGAAGTTGG+TGG | - | chr3.3:84189158-84189177 | MS.gene38714:intron | 55.0% | |
| TCCATGCCTCTCCAAGACTC+TGG | + | chr3.3:84190529-84190548 | None:intergenic | 55.0% | |
| TGGGATATGCGTGACCGTCA+TGG | - | chr3.3:84189438-84189457 | MS.gene38714:intron | 55.0% | |
| ! | AGGTGGTAGAAAGGGGGTGT+TGG | + | chr3.3:84190619-84190638 | None:intergenic | 55.0% |
| !! | GAAAGGGGGTGTTGGAAGCA+AGG | + | chr3.3:84190611-84190630 | None:intergenic | 55.0% |
| CAGGCGAAAACCGCCTTTCC+TGG | - | chr3.3:84189642-84189661 | MS.gene38714:intron | 60.0% | |
| CCACACGACGCTGATCAGCT+AGG | + | chr3.3:84188714-84188733 | None:intergenic | 60.0% | |
| CCCAGAGTCTTGGAGAGGCA+TGG | - | chr3.3:84190525-84190544 | MS.gene38714:CDS | 60.0% | |
| CCTAGCTGATCAGCGTCGTG+TGG | - | chr3.3:84188711-84188730 | MS.gene38714:intron | 60.0% | |
| GGGATTCAGAGCTTGGCGCT+TGG | - | chr3.3:84189027-84189046 | MS.gene38714:intron | 60.0% | |
| !! | GGGGTGTTGGAAGCAAGGGA+AGG | + | chr3.3:84190606-84190625 | None:intergenic | 60.0% |
| CACGCCAGTGAGAGCGAGTC+AGG | - | chr3.3:84188969-84188988 | MS.gene38714:intron | 65.0% | |
| ! | CTGACTCGCTCTCACTGGCG+TGG | + | chr3.3:84188971-84188990 | None:intergenic | 65.0% |
| !! | GAGCTTGGCGCTTGGTGCTC+TGG | - | chr3.3:84189035-84189054 | MS.gene38714:intron | 65.0% |
| CTCACTGGCGTGGCCGAACC+AGG | + | chr3.3:84188961-84188980 | None:intergenic | 70.0% | |
| GGTGGCGCTCACAGCCGCGA+CGG | - | chr3.3:84188277-84188296 | MS.gene38714:CDS | 75.0% | |
| GTGGCGCTCACAGCCGCGAC+GGG | - | chr3.3:84188278-84188297 | MS.gene38714:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84188274 | 84191382 | 84188274 | ID=MS.gene38714 |
| chr3.3 | mRNA | 84188274 | 84191382 | 84188274 | ID=MS.gene38714.t1;Parent=MS.gene38714 |
| chr3.3 | exon | 84189751 | 84191382 | 84189751 | ID=MS.gene38714.t1.exon1;Parent=MS.gene38714.t1 |
| chr3.3 | CDS | 84189751 | 84191382 | 84189751 | ID=cds.MS.gene38714.t1;Parent=MS.gene38714.t1 |
| chr3.3 | exon | 84188274 | 84188555 | 84188274 | ID=MS.gene38714.t1.exon2;Parent=MS.gene38714.t1 |
| chr3.3 | CDS | 84188274 | 84188555 | 84188274 | ID=cds.MS.gene38714.t1;Parent=MS.gene38714.t1 |
| Gene Sequence |
| Protein sequence |
