AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39712


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39712.t1 MTR_8g008500 93.023 258 18 0 1 258 1 258 1.34e-177 499
MS.gene39712.t1 MTR_8g008500 65.680 169 55 2 309 474 21 189 2.31e-71 228
MS.gene39712.t1 MTR_8g008505 83.012 259 39 3 1 258 1 255 8.43e-155 441
MS.gene39712.t1 MTR_8g008505 68.125 160 50 1 315 474 28 186 8.82e-73 232
MS.gene39712.t1 MTR_8g008660 77.132 258 53 2 1 258 1 252 2.10e-141 407
MS.gene39712.t1 MTR_8g008660 65.060 166 55 1 309 474 21 183 1.45e-69 223
MS.gene39712.t1 MTR_3g464040 70.189 265 66 4 12 276 4 255 2.00e-126 369
MS.gene39712.t1 MTR_3g464040 66.875 160 50 1 315 474 19 175 3.12e-69 222
MS.gene39712.t1 MTR_8g007675 95.679 162 7 0 313 474 30 191 1.57e-109 326
MS.gene39712.t1 MTR_8g007675 66.522 230 74 2 27 256 32 258 9.39e-108 322
MS.gene39712.t1 MTR_8g007670 55.128 234 101 3 26 258 6 236 8.59e-86 265
MS.gene39712.t1 MTR_8g007670 59.036 166 68 0 309 474 1 166 1.66e-67 217
MS.gene39712.t1 MTR_5g018320 54.310 232 102 3 23 253 1 229 2.80e-81 253
MS.gene39712.t1 MTR_5g018320 56.098 164 71 1 312 474 2 165 1.32e-62 204
MS.gene39712.t1 MTR_5g018300 53.275 229 103 3 26 253 7 232 1.99e-79 248
MS.gene39712.t1 MTR_5g018300 57.143 161 68 1 315 474 8 168 2.15e-60 199
MS.gene39712.t1 MTR_5g018280 52.155 232 100 5 26 253 7 231 4.41e-75 237
MS.gene39712.t1 MTR_5g018280 52.795 161 74 2 315 474 8 167 2.14e-49 170
MS.gene39712.t1 MTR_8g007670 47.863 234 74 3 26 258 6 192 5.68e-69 219
MS.gene39712.t1 MTR_8g007670 62.595 131 49 0 309 439 1 131 1.56e-53 179
MS.gene39712.t1 MTR_8g079120 40.175 229 128 5 26 253 10 230 1.13e-49 171
MS.gene39712.t1 MTR_8g079120 44.118 170 89 3 307 474 3 168 2.52e-42 151
MS.gene39712.t1 MTR_5g018365 40.708 226 125 5 26 250 11 228 2.20e-48 167
MS.gene39712.t1 MTR_5g018365 43.931 173 90 4 312 481 9 177 9.16e-41 147
MS.gene39712.t1 MTR_5g018350 39.286 224 129 4 27 250 7 223 4.67e-45 158
MS.gene39712.t1 MTR_5g018350 44.706 170 87 5 315 482 7 171 6.05e-38 139
MS.gene39712.t1 MTR_8g079120 44.444 171 89 3 307 475 45 211 1.85e-43 153
MS.gene39712.t1 MTR_8g079120 42.515 167 91 3 26 192 52 213 2.11e-37 137
MS.gene39712.t1 MTR_5g068100 38.053 226 134 3 26 251 29 248 2.02e-42 152
MS.gene39712.t1 MTR_5g068100 38.509 161 98 1 315 474 30 190 7.17e-32 124
MS.gene39712.t1 MTR_3g093730 37.179 234 135 4 21 251 30 254 1.39e-39 145
MS.gene39712.t1 MTR_3g093730 34.872 195 126 1 281 474 2 196 6.27e-34 129
MS.gene39712.t1 MTR_7g015220 36.000 225 138 3 27 251 124 342 2.18e-36 138
MS.gene39712.t1 MTR_7g015220 39.394 165 97 2 312 474 121 284 1.34e-32 128
MS.gene39712.t1 MTR_3g005410 30.342 234 156 3 19 251 86 313 1.25e-32 127
MS.gene39712.t1 MTR_3g005410 33.526 173 113 1 312 482 91 263 1.64e-27 113
MS.gene39712.t1 MTR_3g093730 34.591 159 104 0 281 439 2 160 8.83e-29 114
MS.gene39712.t1 MTR_3g093730 32.353 238 96 6 21 251 30 209 3.02e-27 110
MS.gene39712.t1 MTR_5g008130 73.913 46 12 0 206 251 2 47 5.74e-18 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39712.t1 AT3G50440 41.150 226 130 2 28 253 22 244 3.79e-55 186
MS.gene39712.t1 AT3G50440 48.235 170 83 2 316 480 22 191 7.89e-47 164
MS.gene39712.t1 AT2G23600 43.556 225 116 4 26 246 8 225 4.81e-52 177
MS.gene39712.t1 AT2G23600 44.172 163 87 3 315 474 9 170 9.12e-39 142
MS.gene39712.t1 AT2G23600 43.556 225 116 4 26 246 23 240 4.90e-52 177
MS.gene39712.t1 AT2G23600 44.172 163 87 3 315 474 24 185 1.08e-38 142
MS.gene39712.t1 AT2G23610 41.150 226 130 2 26 251 8 230 6.83e-51 174
MS.gene39712.t1 AT2G23610 46.914 162 80 4 315 472 9 168 1.35e-41 149
MS.gene39712.t1 AT2G23620 40.726 248 127 5 26 262 8 246 2.17e-50 172
MS.gene39712.t1 AT2G23620 43.976 166 89 3 312 474 6 170 1.30e-39 144
MS.gene39712.t1 AT2G23590 40.239 251 138 6 1 251 1 239 9.43e-49 169
MS.gene39712.t1 AT2G23590 38.172 186 101 5 299 481 13 187 1.92e-34 130
MS.gene39712.t1 AT2G23580 39.689 257 138 10 24 272 5 252 7.43e-48 166
MS.gene39712.t1 AT2G23580 42.353 170 94 3 316 481 9 178 1.98e-36 135
MS.gene39712.t1 AT1G33990 34.348 230 138 4 26 251 96 316 3.88e-41 150
MS.gene39712.t1 AT1G33990 35.979 189 115 4 296 482 82 266 1.29e-29 119
MS.gene39712.t1 AT4G16690 35.600 250 135 8 27 263 12 248 1.06e-40 147
MS.gene39712.t1 AT4G16690 39.157 166 87 2 315 474 12 169 9.40e-32 123
MS.gene39712.t1 AT3G10870 36.444 225 141 2 27 251 20 242 1.80e-40 147
MS.gene39712.t1 AT3G10870 37.888 161 99 1 315 474 20 180 3.17e-33 127
MS.gene39712.t1 AT4G37150 37.946 224 135 3 26 249 2 221 2.55e-40 145
MS.gene39712.t1 AT4G37150 38.889 162 96 2 315 474 3 163 9.25e-34 128
MS.gene39712.t1 AT2G23600 44.512 164 87 3 315 475 24 186 2.84e-40 143
MS.gene39712.t1 AT2G23600 45.238 168 83 3 26 189 23 185 4.09e-40 143
MS.gene39712.t1 AT2G23550 36.992 246 140 8 24 264 12 247 9.70e-40 145
MS.gene39712.t1 AT2G23550 44.099 161 85 3 316 472 16 175 2.37e-36 135
MS.gene39712.t1 AT2G23550 36.992 246 140 8 24 264 5 240 1.04e-39 144
MS.gene39712.t1 AT2G23550 44.099 161 85 3 316 472 9 168 2.23e-36 135
MS.gene39712.t1 AT1G26360 37.391 230 138 3 22 251 184 407 1.27e-39 149
MS.gene39712.t1 AT1G26360 43.151 146 82 1 311 455 185 330 5.02e-32 127
MS.gene39712.t1 AT2G23560 37.946 224 132 5 24 246 5 222 1.47e-38 141
MS.gene39712.t1 AT2G23560 42.857 161 86 3 315 472 8 165 5.00e-38 140
MS.gene39712.t1 AT5G58310 34.545 220 136 3 27 242 5 220 1.85e-38 141
MS.gene39712.t1 AT5G58310 39.766 171 96 2 315 479 5 174 1.61e-35 133
MS.gene39712.t1 AT2G23550 43.902 164 87 3 316 475 16 178 8.03e-38 137
MS.gene39712.t1 AT2G23550 41.667 168 90 5 24 187 12 175 1.46e-29 115
MS.gene39712.t1 AT4G09900 32.068 237 148 4 19 251 90 317 8.39e-38 142
MS.gene39712.t1 AT4G09900 34.320 169 109 2 316 482 99 267 4.04e-29 117
MS.gene39712.t1 AT1G69240 34.199 231 146 3 22 251 182 407 1.19e-37 143
MS.gene39712.t1 AT1G69240 39.456 147 87 1 311 455 183 329 3.13e-30 122
MS.gene39712.t1 AT5G10300 36.652 221 135 4 27 247 6 221 2.51e-37 138
MS.gene39712.t1 AT5G10300 40.000 165 99 0 310 474 1 165 6.19e-36 134
MS.gene39712.t1 AT5G10300 40.361 166 99 0 310 475 1 166 4.72e-37 135
MS.gene39712.t1 AT5G10300 40.606 165 95 3 27 191 6 167 3.12e-30 117
MS.gene39712.t1 AT2G23580 41.420 169 96 2 315 480 8 176 6.48e-37 135
MS.gene39712.t1 AT2G23580 45.509 167 85 6 24 187 5 168 3.95e-35 130
MS.gene39712.t1 AT3G29770 38.326 227 130 4 27 251 138 356 2.71e-36 138
MS.gene39712.t1 AT3G29770 41.463 164 95 1 312 474 135 298 1.50e-32 128
MS.gene39712.t1 AT2G23610 34.956 226 99 3 26 251 8 185 2.79e-35 131
MS.gene39712.t1 AT2G23610 55.882 102 44 1 315 415 9 110 3.28e-34 128
MS.gene39712.t1 AT4G37140 50.485 103 51 0 315 417 3 105 1.84e-33 123
MS.gene39712.t1 AT4G37140 50.476 105 51 1 26 130 2 105 1.25e-31 118
MS.gene39712.t1 AT4G37140 48.889 90 46 0 315 404 3 92 5.68e-29 110
MS.gene39712.t1 AT4G37140 48.913 92 46 1 26 117 2 92 1.99e-27 105
MS.gene39712.t1 AT2G23550 32.653 245 123 7 24 264 5 211 9.83e-29 114
MS.gene39712.t1 AT2G23550 36.875 160 69 3 316 472 9 139 1.51e-23 99.4
MS.gene39712.t1 AT3G29770 50.000 76 38 0 312 387 135 210 1.91e-18 85.9
MS.gene39712.t1 AT3G29770 50.000 74 36 1 27 100 138 210 6.09e-17 81.6
MS.gene39712.t1 AT2G23570 31.126 151 101 2 105 255 2 149 2.32e-12 65.9

Find 100 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACCATTGATGTCATTTA+TGG 0.077530 8.1:+85971166 MS.gene39712:CDS
TGAACCTTTGATATCATTTA+TGG 0.078023 8.1:+85967108 MS.gene39712:CDS
CCTCCAACTGGCTTGTTATT+TGG 0.141072 8.1:+85967815 MS.gene39712:CDS
ATCTTGGATGCCATGAATTT+TGG 0.212352 8.1:-85972313 None:intergenic
TAGAAGGATTAGTTCTTTAA+TGG 0.232720 8.1:+85972231 MS.gene39712:CDS
TAGACTCAATATTTGAATAT+TGG 0.243547 8.1:+85969516 MS.gene39712:intron
ATTCTTGTGGGTCATAGTTT+TGG 0.257233 8.1:+85967157 MS.gene39712:CDS
TTAGAGAGGATCTGCAATTA+TGG 0.262915 8.1:+85968529 MS.gene39712:CDS
ACAAGAATTAACTTCTCATT+TGG 0.313936 8.1:-85971200 None:intergenic
CAGATTGGATGCCAAGAGTT+TGG 0.316731 8.1:-85967840 None:intergenic
ATCACTTTCACCTCATCATA+TGG 0.319123 8.1:-85968570 None:intergenic
TGAATCTCTTGTACTTGTAT+TGG 0.323609 8.1:-85971125 None:intergenic
TTGGAAATAATGAAGACTTT+TGG 0.329148 8.1:-85968492 None:intergenic
TGTTCAGAGAAATCTTAATT+AGG 0.331383 8.1:+85969574 MS.gene39712:CDS
ACAATTGAATTGGCTGGTTC+AGG 0.332244 8.1:+85971095 MS.gene39712:CDS
TATTATCAAAATGTTTAAAC+GGG 0.343877 8.1:+85966856 None:intergenic
TACACCTCTGACTCAGGATC+TGG 0.350436 8.1:-85969677 None:intergenic
TAATGTTACAACAATTGAAT+TGG 0.361515 8.1:+85971085 MS.gene39712:CDS
AATGAGAAGTTAATTCTTGT+TGG 0.365344 8.1:+85971203 MS.gene39712:CDS
CAAACCTGCAACTGCTAGAT+TGG 0.368595 8.1:+85972285 MS.gene39712:CDS
ATATTATCAAAATGTTTAAA+CGG 0.371932 8.1:+85966855 None:intergenic
TCTAATGAAAATGTCTCCTT+TGG 0.376102 8.1:-85968511 None:intergenic
CTAGCAGTTGCAGGTTTGTT+GGG 0.377021 8.1:-85972280 None:intergenic
AAGCCAGTTGGAGGACTGTT+TGG 0.386544 8.1:-85967806 None:intergenic
TACCCTTCCATTCCTCTGCT+TGG 0.389684 8.1:-85968469 None:intergenic
CCATCTTGTAGCAAGCTAGA+AGG 0.392296 8.1:+85972215 MS.gene39712:intron
AAACACTTTGTGCTTGTTCA+TGG 0.394728 8.1:+85966941 MS.gene39712:CDS
TCTAGCAGTTGCAGGTTTGT+TGG 0.395041 8.1:-85972281 None:intergenic
TGGTGCATGGTGTTGGTATA+AGG 0.400591 8.1:+85971034 MS.gene39712:CDS
ATTACCTCTTGAAGAACAAC+AGG 0.404228 8.1:-85971335 None:intergenic
GTGCATGAGTCGACGTCAAT+TGG 0.405402 8.1:+85969617 MS.gene39712:CDS
ATTCTTGTTGGTCATAGTCT+TGG 0.409610 8.1:+85971215 MS.gene39712:CDS
TGAATCTCTTGAACCTGTAT+TGG 0.414588 8.1:-85967064 None:intergenic
CCAACCAATCTAGCAGTTGC+AGG 0.423936 8.1:-85972289 None:intergenic
TTTGTGCTTGTTCATGGAGC+TGG 0.431944 8.1:+85966947 MS.gene39712:CDS
ATTGGTTGGACCAAAATTCA+TGG 0.434970 8.1:+85972303 MS.gene39712:CDS
CTTGTTGGTCATAGTCTTGG+TGG 0.441219 8.1:+85971218 MS.gene39712:CDS
GTTACAACAATTGAATTGGC+TGG 0.460288 8.1:+85971089 MS.gene39712:CDS
AGGCGATAATTGATACAGAT+TGG 0.460726 8.1:-85967855 None:intergenic
TTCTCTTCCTCCAAAGGAAA+AGG 0.464266 8.1:+85967132 MS.gene39712:CDS
AGAATTAACTTCTCATTTGG+AGG 0.467244 8.1:-85971197 None:intergenic
CATGCGCAGGATTTGACACT+TGG 0.467706 8.1:+85968378 MS.gene39712:intron
GTTATTTGGATCCAAACTCT+TGG 0.471433 8.1:+85967829 MS.gene39712:CDS
GAAGTAAACTTGTAAAATTG+AGG 0.474859 8.1:-85967267 None:intergenic
CCTGCAACTGCTAGATTGGT+TGG 0.480634 8.1:+85972289 MS.gene39712:CDS
TTGTTGGTCATAGTCTTGGT+GGG 0.483396 8.1:+85971219 MS.gene39712:CDS
GGACCAAACAGTCCTCCAAC+TGG 0.486769 8.1:+85967803 MS.gene39712:CDS
TTGTGGTATCAGTCCAATAC+AGG 0.487062 8.1:+85967051 MS.gene39712:CDS
GACTCATGCACTTTGCAAGT+TGG 0.488800 8.1:-85969605 None:intergenic
GATACCCTTATCTGTTGCTA+TGG 0.489986 8.1:+85967183 MS.gene39712:CDS
AAGGAAAAGGTGATTCTTGT+GGG 0.492621 8.1:+85967145 MS.gene39712:CDS
CTCTGAACATACAAAGATTG+TGG 0.498927 8.1:-85969560 None:intergenic
ATGGAGCTGGCCATGGTGCA+TGG 0.509766 8.1:+85966960 MS.gene39712:CDS
TTATGGATAATTGAGAGAAC+TGG 0.510143 8.1:+85968546 MS.gene39712:CDS
GCAACTATGCTTAAATCAGC+TGG 0.513884 8.1:+85971059 MS.gene39712:CDS
GGTGTCTACATCTGTTGCTA+TGG 0.514872 8.1:+85971241 MS.gene39712:CDS
GCAACTATGCTTAAATCAGC+TGG 0.517535 8.1:+85966998 MS.gene39712:CDS
TATGGATTCTCTTCCTCCAA+AGG 0.520175 8.1:+85967126 MS.gene39712:CDS
AAAGTTGTTGCTAACTGTAG+TGG 0.521382 8.1:+85969648 MS.gene39712:CDS
TAATGTTACAACTATTGACT+TGG 0.521866 8.1:+85967024 MS.gene39712:CDS
AAAGTCTTCATTATTTCCAA+AGG 0.521901 8.1:+85968495 MS.gene39712:CDS
AGAGTTACCAAGCAGAGGAA+TGG 0.523198 8.1:+85968462 MS.gene39712:CDS
CCAAATAACAAGCCAGTTGG+AGG 0.528964 8.1:-85967815 None:intergenic
CTGGCCATGGTGCATGGTGT+TGG 0.530072 8.1:+85966966 MS.gene39712:CDS
TGGTGATAATTGATACATCT+TGG 0.534510 8.1:-85972329 None:intergenic
TCGTCATTAAAGATAGGATG+TGG 0.534576 8.1:-85968417 None:intergenic
CTTGTTCATGGAGCTGGCCA+TGG 0.536035 8.1:+85966953 MS.gene39712:CDS
AAAGGAAAAGGTGATTCTTG+TGG 0.537925 8.1:+85967144 MS.gene39712:CDS
TTACCAAGCAGAGGAATGGA+AGG 0.538666 8.1:+85968466 MS.gene39712:CDS
ACACCTCTGACTCAGGATCT+GGG 0.542097 8.1:-85969676 None:intergenic
CTGATTCATGGTGGAAGCCA+TGG 0.542667 8.1:+85971014 MS.gene39712:CDS
ATACCCTGTTGTTCTTCAAG+AGG 0.545354 8.1:+85971331 MS.gene39712:CDS
GTATCAATTATCGCCTAATG+AGG 0.552044 8.1:+85967862 MS.gene39712:CDS
CCACAGTTAGTCTTCTCTGA+TGG 0.553719 8.1:+85967782 MS.gene39712:CDS
GATTCCATAAATGACATCAA+TGG 0.557899 8.1:-85971170 None:intergenic
GAAGCCATGGTGCATGGTGT+TGG 0.558171 8.1:+85971027 MS.gene39712:CDS
GATCCAAATAACAAGCCAGT+TGG 0.568650 8.1:-85967818 None:intergenic
TTTGACACTTGGATCGTCGT+TGG 0.570218 8.1:+85968389 MS.gene39712:CDS
ACTATTGACTTGGCTGCTTG+TGG 0.574234 8.1:+85967034 MS.gene39712:CDS
AACATATACTCCACCTCAGA+TGG 0.576227 8.1:-85972349 None:intergenic
TGTTGGTCATAGTCTTGGTG+GGG 0.581014 8.1:+85971220 MS.gene39712:CDS
GAAGAACAACAGGGTATGAG+AGG 0.589704 8.1:-85971325 None:intergenic
AAACAAGAGTTACCAAGCAG+AGG 0.595363 8.1:+85968457 MS.gene39712:CDS
TCAATTATCACCATCTGAGG+TGG 0.598444 8.1:+85972339 MS.gene39712:CDS
GAATCCATAAATGATATCAA+AGG 0.609540 8.1:-85967112 None:intergenic
TATCCCAGATCCTGAGTCAG+AGG 0.627043 8.1:+85969673 MS.gene39712:CDS
CTGTGGTGGATCTTGTTGAG+TGG 0.634018 8.1:-85967765 None:intergenic
AATATTGGATGTACAGAACG+TGG 0.634272 8.1:+85969531 MS.gene39712:CDS
GGTGGAGTATATGTTAATGT+TGG 0.636064 8.1:+85972357 MS.gene39712:CDS
ATGGTGGAAGCCATGGTGCA+TGG 0.643508 8.1:+85971021 MS.gene39712:CDS
TCAGAGAAGACTAACTGTGG+TGG 0.643713 8.1:-85967779 None:intergenic
TATACCAACACCATGCACCA+TGG 0.666354 8.1:-85966970 None:intergenic
TATACCAACACCATGCACCA+TGG 0.667607 8.1:-85971031 None:intergenic
GTATCAATTATCACCATCTG+AGG 0.675132 8.1:+85972336 MS.gene39712:CDS
CCATCAGAGAAGACTAACTG+TGG 0.690147 8.1:-85967782 None:intergenic
TACCAAGCAGAGGAATGGAA+GGG 0.694878 8.1:+85968467 MS.gene39712:CDS
ATTATCAAAATGTTTAAACG+GGG 0.703596 8.1:+85966857 None:intergenic
AGTCGACGTCAATTGGACAA+CGG 0.753669 8.1:+85969624 MS.gene39712:CDS
GAGAACTGGTCCATATGATG+AGG 0.761857 8.1:+85968560 MS.gene39712:CDS
TTACCTCTTGAAGAACAACA+GGG 0.771294 8.1:-85971334 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAATAATAATATATA+AGG + chr8.1:85971747-85971766 MS.gene39712:intron 0.0%
!! TATTTATATTAATAAAAATT+AGG + chr8.1:85967355-85967374 MS.gene39712:intron 0.0%
!!! AAAATTTAAAATTAAAATAA+TGG - chr8.1:85970588-85970607 None:intergenic 0.0%
!!! ATATATAATTTTATTAATTT+GGG - chr8.1:85970689-85970708 None:intergenic 0.0%
!!! TATATATAATTTTATTAATT+TGG - chr8.1:85970690-85970709 None:intergenic 0.0%
!! AATAACTTCATTAAAAAAAT+AGG + chr8.1:85969704-85969723 MS.gene39712:intron 10.0%
!! AATATAAATATATATAACCA+TGG - chr8.1:85967345-85967364 None:intergenic 10.0%
!! CATATATGATATAATATATA+AGG + chr8.1:85971991-85972010 MS.gene39712:intron 10.0%
!! CATTCAAAATTAAAATTATT+AGG + chr8.1:85967518-85967537 MS.gene39712:intron 10.0%
!! CTTATATATTATATCATATA+TGG - chr8.1:85971993-85972012 None:intergenic 10.0%
!!! ATACAAAAAAAATCTAATTT+TGG - chr8.1:85970344-85970363 None:intergenic 10.0%
!!! ATTTTAATAAAAACTATTGA+AGG + chr8.1:85968819-85968838 MS.gene39712:intron 10.0%
!!! TATGAATAATTTAATTTTGT+GGG - chr8.1:85971401-85971420 None:intergenic 10.0%
!!! TGTTATTTTTAATTTAATTG+AGG - chr8.1:85971447-85971466 None:intergenic 10.0%
!!! TTATGAATAATTTAATTTTG+TGG - chr8.1:85971402-85971421 None:intergenic 10.0%
!!! TTTTAATAAAAACTATTGAA+GGG + chr8.1:85968820-85968839 MS.gene39712:intron 10.0%
!! AAAAGTAAAAATATTGAGAA+TGG - chr8.1:85972108-85972127 None:intergenic 15.0%
!! AAAATAGGATATTTATCATT+AGG + chr8.1:85969719-85969738 MS.gene39712:intron 15.0%
!! AAAGTAAAAATATTGAGAAT+GGG - chr8.1:85972107-85972126 None:intergenic 15.0%
!! AAATTATCCTTCATTAAATA+TGG + chr8.1:85969896-85969915 MS.gene39712:intron 15.0%
!! AAATTTATAAGATGATGAAA+AGG + chr8.1:85970916-85970935 MS.gene39712:intron 15.0%
!! AATAGAAATAAATGTCTTAA+AGG - chr8.1:85970417-85970436 None:intergenic 15.0%
!! AATTTATAAGATGATGAAAA+GGG + chr8.1:85970917-85970936 MS.gene39712:intron 15.0%
!! CAAACTAATAATAAACATTA+AGG - chr8.1:85968717-85968736 None:intergenic 15.0%
!! GAATGTTAATTTCTAATAAA+AGG - chr8.1:85967503-85967522 None:intergenic 15.0%
!! TAATATAATATGGTATGTTA+AGG - chr8.1:85968309-85968328 None:intergenic 15.0%
!! TACATATATATTACTTTGTT+GGG + chr8.1:85971498-85971517 MS.gene39712:intron 15.0%
!! TATAAGATCTCTATTATATT+CGG - chr8.1:85969824-85969843 None:intergenic 15.0%
!! TTAAAAATAAATGGAGAATA+TGG + chr8.1:85968764-85968783 MS.gene39712:intron 15.0%
!! TTAAACTTCAAATTATTAGA+AGG + chr8.1:85968214-85968233 MS.gene39712:intron 15.0%
!!! AAAATCCATTAAAGTATTTT+AGG - chr8.1:85967636-85967655 None:intergenic 15.0%
!!! AACATATTTAATCCTTTTTT+AGG + chr8.1:85971649-85971668 MS.gene39712:intron 15.0%
!!! AACTCTTTATTTTTTTTTTG+TGG - chr8.1:85971920-85971939 None:intergenic 15.0%
!!! AATATTAGATATGCTTTTAT+TGG + chr8.1:85968667-85968686 MS.gene39712:intron 15.0%
!!! AATTATTTTAACAAAAGTCA+AGG - chr8.1:85968091-85968110 None:intergenic 15.0%
!!! ACTCTTTATTTTTTTTTTTG+TGG - chr8.1:85972049-85972068 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTTTGTGG+TGG - chr8.1:85971802-85971821 None:intergenic 15.0%
!!! CTATTAATCATTCATTTTTT+AGG - chr8.1:85970771-85970790 None:intergenic 15.0%
!!! TAAATATAGTTTATCGTTTT+GGG + chr8.1:85971522-85971541 MS.gene39712:intron 15.0%
!!! TAGACTTTTTTTTTTTTTGA+GGG + chr8.1:85968159-85968178 MS.gene39712:intron 15.0%
!!! TATATACCTTTTGAATTTTA+TGG + chr8.1:85971552-85971571 MS.gene39712:intron 15.0%
!!! TATTTTTTTTTTTTTTGTGG+TGG - chr8.1:85971860-85971879 None:intergenic 15.0%
!!! TCTCAATATTTTTACTTTTT+AGG + chr8.1:85972109-85972128 MS.gene39712:intron 15.0%
!!! TTAAATATAGTTTATCGTTT+TGG + chr8.1:85971521-85971540 MS.gene39712:intron 15.0%
!!! TTAATCAAAGTTTAAAATTG+TGG - chr8.1:85971943-85971962 None:intergenic 15.0%
!!! TTAGACTTTTTTTTTTTTTG+AGG + chr8.1:85968158-85968177 MS.gene39712:intron 15.0%
!!! TTTATTCTTTCATTTTTCAT+TGG + chr8.1:85966908-85966927 MS.gene39712:CDS 15.0%
!!! TTTGTTAAAATAATTTGTCT+AGG + chr8.1:85968096-85968115 MS.gene39712:intron 15.0%
!! AAACATCATTAATGATTCAT+TGG + chr8.1:85970021-85970040 MS.gene39712:intron 20.0%
!! AGTTAATGAAGATGTTAAAA+AGG - chr8.1:85967553-85967572 None:intergenic 20.0%
!! ATCAATTTACAGAGAAAATA+TGG - chr8.1:85970717-85970736 None:intergenic 20.0%
!! ATTATTGATAGAAATGAGTT+AGG + chr8.1:85970178-85970197 MS.gene39712:intron 20.0%
!! CAATTAGTTATACAAATGTT+AGG - chr8.1:85969306-85969325 None:intergenic 20.0%
!! CTACATATATATTACTTTGT+TGG + chr8.1:85971497-85971516 MS.gene39712:intron 20.0%
!! CTATGAAAATAAATTCTTCT+TGG - chr8.1:85970802-85970821 None:intergenic 20.0%
!! CTTAAAACGACTTATAATTT+AGG + chr8.1:85970081-85970100 MS.gene39712:intron 20.0%
!! GAAAACCTAAAATACTTTAA+TGG + chr8.1:85967628-85967647 MS.gene39712:intron 20.0%
!! TAATGTTACAACAATTGAAT+TGG + chr8.1:85971085-85971104 MS.gene39712:CDS 20.0%
!! TAGACTCAATATTTGAATAT+TGG + chr8.1:85969516-85969535 MS.gene39712:intron 20.0%
!! TAGGAATCAATAAATAAAAG+TGG - chr8.1:85969287-85969306 None:intergenic 20.0%
!! TCCATAAAAAAGAATAAACT+CGG + chr8.1:85967594-85967613 MS.gene39712:intron 20.0%
!! TCTTGATTGAAAATTTGAAA+AGG + chr8.1:85967898-85967917 MS.gene39712:intron 20.0%
!! TTATAAACAACTCCTAAAAA+AGG - chr8.1:85971664-85971683 None:intergenic 20.0%
!!! AATGGATTAAATTTTTGAGT+TGG - chr8.1:85969197-85969216 None:intergenic 20.0%
!!! ATATGCTTTTATTGGTTTTT+TGG + chr8.1:85968675-85968694 MS.gene39712:intron 20.0%
!!! CAAATAAGTGTATAGATTTT+TGG - chr8.1:85968267-85968286 None:intergenic 20.0%
!!! CATGAAATTCTTTTACATAA+TGG - chr8.1:85969215-85969234 None:intergenic 20.0%
!!! CCAATGACATATTTTAAAAA+TGG + chr8.1:85971579-85971598 MS.gene39712:intron 20.0%
!!! CCATTTTTAAAATATGTCAT+TGG - chr8.1:85971582-85971601 None:intergenic 20.0%
!!! CTGAGTTTTAATTTTAATTG+TGG + chr8.1:85967669-85967688 MS.gene39712:intron 20.0%
!!! CTTTATTTTTTTTTTTGTGG+TGG - chr8.1:85972046-85972065 None:intergenic 20.0%
!!! GAATTTTAAAAATTGAGTGA+GGG + chr8.1:85971621-85971640 MS.gene39712:intron 20.0%
!!! TCTTTATTTTTTTTTTGTGG+TGG - chr8.1:85971917-85971936 None:intergenic 20.0%
!!! TGAATTTTAAAAATTGAGTG+AGG + chr8.1:85971620-85971639 MS.gene39712:intron 20.0%
! AAAAAAAAATATAAGGTCCG+AGG + chr8.1:85971812-85971831 MS.gene39712:intron 25.0%
! AAACGACTTATAATTTAGGA+CGG + chr8.1:85970085-85970104 MS.gene39712:intron 25.0%
! AAAGTCTTCATTATTTCCAA+AGG + chr8.1:85968495-85968514 MS.gene39712:CDS 25.0%
! AACTTTGATTAAAGACAAAG+AGG + chr8.1:85971966-85971985 MS.gene39712:intron 25.0%
! AATGAGAAGTTAATTCTTGT+TGG + chr8.1:85971203-85971222 MS.gene39712:CDS 25.0%
! AATGATCATTCGGAAAAAAA+AGG - chr8.1:85969262-85969281 None:intergenic 25.0%
! ACAAGAATTAACTTCTCATT+TGG - chr8.1:85971203-85971222 None:intergenic 25.0%
! ATAATAATATATAAGGTCCG+AGG + chr8.1:85971754-85971773 MS.gene39712:intron 25.0%
! ATAGACAAAGGAAAAAGAAT+TGG + chr8.1:85969780-85969799 MS.gene39712:intron 25.0%
! CCTTCATTAAATATGGTATA+GGG + chr8.1:85969903-85969922 MS.gene39712:intron 25.0%
! CTTCATGTGCATATATATAA+AGG + chr8.1:85970825-85970844 MS.gene39712:intron 25.0%
! CTTTATATATATGCACATGA+AGG - chr8.1:85970827-85970846 None:intergenic 25.0%
! GAAGTAAACTTGTAAAATTG+AGG - chr8.1:85967270-85967289 None:intergenic 25.0%
! GAATCCATAAATGATATCAA+AGG - chr8.1:85967115-85967134 None:intergenic 25.0%
! GATTCATTGGCATTATAAAA+CGG + chr8.1:85970034-85970053 MS.gene39712:intron 25.0%
! GCACTATTAACACAAATTAT+AGG - chr8.1:85970984-85971003 None:intergenic 25.0%
! GTAAATAGTATTAGTAACCA+TGG + chr8.1:85967325-85967344 MS.gene39712:intron 25.0%
! TAGACAAAGGAAAAAGAATT+GGG + chr8.1:85969781-85969800 MS.gene39712:intron 25.0%
! TATCTTTAATGACGAAAAAC+TGG + chr8.1:85968425-85968444 MS.gene39712:CDS 25.0%
! TCCTTCATTAAATATGGTAT+AGG + chr8.1:85969902-85969921 MS.gene39712:intron 25.0%
! TGAACCTTTGATATCATTTA+TGG + chr8.1:85967108-85967127 MS.gene39712:CDS 25.0%
! TGTTCAGAGAAATCTTAATT+AGG + chr8.1:85969574-85969593 MS.gene39712:CDS 25.0%
! TTATTGAGCTGATATGATTT+AGG + chr8.1:85968878-85968897 MS.gene39712:intron 25.0%
!! AGTTTTTCGTCATTAAAGAT+AGG - chr8.1:85968426-85968445 None:intergenic 25.0%
!! GGTTGATTCAATAAATCTAA+AGG - chr8.1:85968070-85968089 None:intergenic 25.0%
!! TAATGTTACAACTATTGACT+TGG + chr8.1:85967024-85967043 MS.gene39712:CDS 25.0%
!! TTGGAAATAATGAAGACTTT+TGG - chr8.1:85968495-85968514 None:intergenic 25.0%
!! TTTTACAAGTTTACTTCAAG+AGG + chr8.1:85967273-85967292 MS.gene39712:CDS 25.0%
!!! AGTATTTTAGGTTTTCTTCA+TGG - chr8.1:85967624-85967643 None:intergenic 25.0%
!!! CATTTTTCATTGGTGTTAAT+GGG + chr8.1:85966918-85966937 MS.gene39712:CDS 25.0%
!!! GCAATTTTTTTTACCTCATT+AGG - chr8.1:85967878-85967897 None:intergenic 25.0%
!!! GTATAGGGAAGTTTTTTTTA+GGG + chr8.1:85969918-85969937 MS.gene39712:intron 25.0%
!!! GTATTTTAGGTTTTCTTCAT+GGG - chr8.1:85967623-85967642 None:intergenic 25.0%
!!! TAGAAGGATTAGTTCTTTAA+TGG + chr8.1:85972231-85972250 MS.gene39712:CDS 25.0%
!!! TCATTTTTCATTGGTGTTAA+TGG + chr8.1:85966917-85966936 MS.gene39712:CDS 25.0%
!!! TCCGAGTTTATTCTTTTTTA+TGG - chr8.1:85967598-85967617 None:intergenic 25.0%
!!! TTTTTTAGGGATATGGTATA+GGG + chr8.1:85969931-85969950 MS.gene39712:intron 25.0%
!!! TTTTTTTAGGGATATGGTAT+AGG + chr8.1:85969930-85969949 MS.gene39712:intron 25.0%
AAAAGTGGTCAATGATCATT+CGG - chr8.1:85969272-85969291 None:intergenic 30.0%
ACATTGAAGCCAATTATTGA+TGG + chr8.1:85968352-85968371 MS.gene39712:intron 30.0%
AGAATTAACTTCTCATTTGG+AGG - chr8.1:85971200-85971219 None:intergenic 30.0%
AGTTATCTATGCAAACTGTT+AGG - chr8.1:85969135-85969154 None:intergenic 30.0%
ATGGTATGTTAAGGTAACTT+AGG - chr8.1:85968300-85968319 None:intergenic 30.0%
CCCTATACCATATTTAATGA+AGG - chr8.1:85969906-85969925 None:intergenic 30.0%
GATATAATATATAAGGTCCG+AGG + chr8.1:85971998-85972017 MS.gene39712:intron 30.0%
GATTCCATAAATGACATCAA+TGG - chr8.1:85971173-85971192 None:intergenic 30.0%
GGTAGTCCATAAAATTCAAA+AGG - chr8.1:85971561-85971580 None:intergenic 30.0%
TAATCTTCTCTGATTCTATG+AGG - chr8.1:85967741-85967760 None:intergenic 30.0%
TATATATAAAGGATCCATCG+CGG + chr8.1:85970836-85970855 MS.gene39712:intron 30.0%
TCTAATGAAAATGTCTCCTT+TGG - chr8.1:85968514-85968533 None:intergenic 30.0%
TGAATCTCTTGTACTTGTAT+TGG - chr8.1:85971128-85971147 None:intergenic 30.0%
TGAGAATGATGTGTGTTATA+TGG - chr8.1:85970550-85970569 None:intergenic 30.0%
TGGTATGTTAAGGTAACTTA+GGG - chr8.1:85968299-85968318 None:intergenic 30.0%
TGGTGATAATTGATACATCT+TGG - chr8.1:85972332-85972351 None:intergenic 30.0%
TTATGGATAATTGAGAGAAC+TGG + chr8.1:85968546-85968565 MS.gene39712:CDS 30.0%
TTCCTTAACTTATGCTCTAA+AGG - chr8.1:85970320-85970339 None:intergenic 30.0%
! ACAGAGTTTTTCTTCTTTGA+TGG + chr8.1:85972256-85972275 MS.gene39712:CDS 30.0%
! ACTGCAAGAGAAATTTTCTT+AGG - chr8.1:85967217-85967236 None:intergenic 30.0%
! AGTGATGAGCATATTTTGTT+TGG - chr8.1:85968938-85968957 None:intergenic 30.0%
! CTGCAAGAGAAATTTTCTTA+GGG - chr8.1:85967216-85967235 None:intergenic 30.0%
! TGAACCATTGATGTCATTTA+TGG + chr8.1:85971166-85971185 MS.gene39712:CDS 30.0%
! TGTCTATTGAGTCTATGTTT+TGG + chr8.1:85969018-85969037 MS.gene39712:intron 30.0%
! TTTTCCATAGCAACAGATAA+GGG - chr8.1:85967190-85967209 None:intergenic 30.0%
!!! GGAAGTTTTTTTTAGGGATA+TGG + chr8.1:85969924-85969943 MS.gene39712:intron 30.0%
!!! GGTATAGGGAAGTTTTTTTT+AGG + chr8.1:85969917-85969936 MS.gene39712:intron 30.0%
AAACACTTTGTGCTTGTTCA+TGG + chr8.1:85966941-85966960 MS.gene39712:CDS 35.0%
AAAGGAAAAGGTGATTCTTG+TGG + chr8.1:85967144-85967163 MS.gene39712:CDS 35.0%
AAAGTTGTTGCTAACTGTAG+TGG + chr8.1:85969648-85969667 MS.gene39712:CDS 35.0%
AAGGAAAAGGTGATTCTTGT+GGG + chr8.1:85967145-85967164 MS.gene39712:CDS 35.0%
AATATTGGATGTACAGAACG+TGG + chr8.1:85969531-85969550 MS.gene39712:CDS 35.0%
AGGCGATAATTGATACAGAT+TGG - chr8.1:85967858-85967877 None:intergenic 35.0%
ATCACTTTCACCTCATCATA+TGG - chr8.1:85968573-85968592 None:intergenic 35.0%
ATCTATGCAAACTGTTAGGT+TGG - chr8.1:85969131-85969150 None:intergenic 35.0%
ATTACCTCTTGAAGAACAAC+AGG - chr8.1:85971338-85971357 None:intergenic 35.0%
ATTCTTGTTGGTCATAGTCT+TGG + chr8.1:85971215-85971234 MS.gene39712:CDS 35.0%
ATTGGTTGGACCAAAATTCA+TGG + chr8.1:85972303-85972322 MS.gene39712:CDS 35.0%
CGCATGTTACCATCAATAAT+TGG - chr8.1:85968364-85968383 None:intergenic 35.0%
CTCTGAACATACAAAGATTG+TGG - chr8.1:85969563-85969582 None:intergenic 35.0%
GATAAAGGATTCAGATCACA+TGG + chr8.1:85968590-85968609 MS.gene39712:intron 35.0%
GGTGGAGTATATGTTAATGT+TGG + chr8.1:85972357-85972376 MS.gene39712:CDS 35.0%
GTATCAATTATCACCATCTG+AGG + chr8.1:85972336-85972355 MS.gene39712:CDS 35.0%
GTATCAATTATCGCCTAATG+AGG + chr8.1:85967862-85967881 MS.gene39712:CDS 35.0%
GTTACAACAATTGAATTGGC+TGG + chr8.1:85971089-85971108 MS.gene39712:CDS 35.0%
GTTATTTGGATCCAAACTCT+TGG + chr8.1:85967829-85967848 MS.gene39712:CDS 35.0%
TAGAGATCGTTGCTATAACT+AGG - chr8.1:85969761-85969780 None:intergenic 35.0%
TATTCTTATTAGAACCGCGA+TGG - chr8.1:85970853-85970872 None:intergenic 35.0%
TCGTCATTAAAGATAGGATG+TGG - chr8.1:85968420-85968439 None:intergenic 35.0%
TCTCAAACGAAGATGATTCT+AGG + chr8.1:85970244-85970263 MS.gene39712:intron 35.0%
TGAATCTCTTGAACCTGTAT+TGG - chr8.1:85967067-85967086 None:intergenic 35.0%
TGATGAGGTGAAAGTGATAA+AGG + chr8.1:85968575-85968594 MS.gene39712:intron 35.0%
TTACCTCTTGAAGAACAACA+GGG - chr8.1:85971337-85971356 None:intergenic 35.0%
TTAGAGAGGATCTGCAATTA+TGG + chr8.1:85968529-85968548 MS.gene39712:CDS 35.0%
TTATATGGAGCTCTCAAAAG+TGG - chr8.1:85970535-85970554 None:intergenic 35.0%
! ACAAGAATCACCTTTTCCTT+TGG - chr8.1:85967145-85967164 None:intergenic 35.0%
! AGGAGACATTTTCATTAGAG+AGG + chr8.1:85968515-85968534 MS.gene39712:CDS 35.0%
! ATCTTGGATGCCATGAATTT+TGG - chr8.1:85972316-85972335 None:intergenic 35.0%
! ATTCTTGTGGGTCATAGTTT+TGG + chr8.1:85967157-85967176 MS.gene39712:CDS 35.0%
! CTTTTCCATAGCAACAGATA+AGG - chr8.1:85967191-85967210 None:intergenic 35.0%
! GACTTATAATTTAGGACGGA+TGG + chr8.1:85970089-85970108 MS.gene39712:intron 35.0%
!! AGTTTACTTCAAGAGGTACT+TGG + chr8.1:85967280-85967299 MS.gene39712:intron 35.0%
!! GTCCTTTAGAGCATAAGTTA+AGG + chr8.1:85970315-85970334 MS.gene39712:intron 35.0%
!!! AATTTTGTGCTGATTCATGG+TGG + chr8.1:85971005-85971024 MS.gene39712:CDS 35.0%
!!! ACTGCAACTGAGATTTTTTG+TGG - chr8.1:85971275-85971294 None:intergenic 35.0%
!!! AGAGGTGAGTTTTTTAGGTT+TGG - chr8.1:85968625-85968644 None:intergenic 35.0%
!!! ATGTGAGAGGTGAGTTTTTT+AGG - chr8.1:85968630-85968649 None:intergenic 35.0%
!!! GCAAATTTTGTGCTGATTCA+TGG + chr8.1:85971002-85971021 MS.gene39712:CDS 35.0%
!!! TCTTTCTTTTGAGATTCGAG+TGG + chr8.1:85969461-85969480 MS.gene39712:intron 35.0%
!!! TTTTTTTACACCTCTGACTC+AGG - chr8.1:85969686-85969705 None:intergenic 35.0%
!!! TTTTTTTTTGTGGTGGCTTG+TGG - chr8.1:85971795-85971814 None:intergenic 35.0%
AAACAAGAGTTACCAAGCAG+AGG + chr8.1:85968457-85968476 MS.gene39712:CDS 40.0%
AACATATACTCCACCTCAGA+TGG - chr8.1:85972352-85972371 None:intergenic 40.0%
AAGTCAAATGCTAACATGCG+TGG - chr8.1:85970460-85970479 None:intergenic 40.0%
AGTCAAATGCTAACATGCGT+GGG - chr8.1:85970459-85970478 None:intergenic 40.0%
ATACCCTGTTGTTCTTCAAG+AGG + chr8.1:85971331-85971350 MS.gene39712:CDS 40.0%
GATACCCTTATCTGTTGCTA+TGG + chr8.1:85967183-85967202 MS.gene39712:CDS 40.0%
GATCCAAATAACAAGCCAGT+TGG - chr8.1:85967821-85967840 None:intergenic 40.0%
GCAACGATCTCTATAGACAA+AGG + chr8.1:85969768-85969787 MS.gene39712:intron 40.0%
GCAACTATGCTTAAATCAGC+TGG + chr8.1:85966998-85967017 MS.gene39712:CDS 40.0%
TATGGATTCTCTTCCTCCAA+AGG + chr8.1:85967126-85967145 MS.gene39712:CDS 40.0%
TCAATTATCACCATCTGAGG+TGG + chr8.1:85972339-85972358 MS.gene39712:CDS 40.0%
TTCTCTTCCTCCAAAGGAAA+AGG + chr8.1:85967132-85967151 MS.gene39712:CDS 40.0%
TTGTGGTATCAGTCCAATAC+AGG + chr8.1:85967051-85967070 MS.gene39712:CDS 40.0%
! ACAATTGAATTGGCTGGTTC+AGG + chr8.1:85971095-85971114 MS.gene39712:CDS 40.0%
! AGAATCACCTTTTCCTTTGG+AGG - chr8.1:85967142-85967161 None:intergenic 40.0%
! TTATTGATGGTAACATGCGC+AGG + chr8.1:85968365-85968384 MS.gene39712:intron 40.0%
! TTGTTGGTCATAGTCTTGGT+GGG + chr8.1:85971219-85971238 MS.gene39712:CDS 40.0%
!! AGCAGTCTTTAGAATGTGAG+AGG - chr8.1:85968643-85968662 None:intergenic 40.0%
!!! TTGTGGGTCATAGTTTTGGA+GGG + chr8.1:85967161-85967180 MS.gene39712:CDS 40.0%
AGAGTTACCAAGCAGAGGAA+TGG + chr8.1:85968462-85968481 MS.gene39712:CDS 45.0%
AGTCGACGTCAATTGGACAA+CGG + chr8.1:85969624-85969643 MS.gene39712:CDS 45.0%
CAAACCTGCAACTGCTAGAT+TGG + chr8.1:85972285-85972304 MS.gene39712:CDS 45.0%
CAGATTGGATGCCAAGAGTT+TGG - chr8.1:85967843-85967862 None:intergenic 45.0%
CCAAATAACAAGCCAGTTGG+AGG - chr8.1:85967818-85967837 None:intergenic 45.0%
CCATCAGAGAAGACTAACTG+TGG - chr8.1:85967785-85967804 None:intergenic 45.0%
CCATCTTGTAGCAAGCTAGA+AGG + chr8.1:85972215-85972234 MS.gene39712:intron 45.0%
GAAGAACAACAGGGTATGAG+AGG - chr8.1:85971328-85971347 None:intergenic 45.0%
GACTCATGCACTTTGCAAGT+TGG - chr8.1:85969608-85969627 None:intergenic 45.0%
GAGAACTGGTCCATATGATG+AGG + chr8.1:85968560-85968579 MS.gene39712:CDS 45.0%
GGTGTCTACATCTGTTGCTA+TGG + chr8.1:85971241-85971260 MS.gene39712:CDS 45.0%
TACCAAGCAGAGGAATGGAA+GGG + chr8.1:85968467-85968486 MS.gene39712:CDS 45.0%
TATACCAACACCATGCACCA+TGG - chr8.1:85966973-85966992 None:intergenic 45.0%
TCAGAGAAGACTAACTGTGG+TGG - chr8.1:85967782-85967801 None:intergenic 45.0%
TCTAGCAGTTGCAGGTTTGT+TGG - chr8.1:85972284-85972303 None:intergenic 45.0%
TTACCAAGCAGAGGAATGGA+AGG + chr8.1:85968466-85968485 MS.gene39712:CDS 45.0%
TTTGACACTTGGATCGTCGT+TGG + chr8.1:85968389-85968408 MS.gene39712:CDS 45.0%
TTTGTGCTTGTTCATGGAGC+TGG + chr8.1:85966947-85966966 MS.gene39712:CDS 45.0%
! CTAGCAGTTGCAGGTTTGTT+GGG - chr8.1:85972283-85972302 None:intergenic 45.0%
! CTTGTTGGTCATAGTCTTGG+TGG + chr8.1:85971218-85971237 MS.gene39712:CDS 45.0%
! TGTTGGTCATAGTCTTGGTG+GGG + chr8.1:85971220-85971239 MS.gene39712:CDS 45.0%
!! ACTATTGACTTGGCTGCTTG+TGG + chr8.1:85967034-85967053 MS.gene39712:CDS 45.0%
!! CCACAGTTAGTCTTCTCTGA+TGG + chr8.1:85967782-85967801 MS.gene39712:CDS 45.0%
!! CCTCCAACTGGCTTGTTATT+TGG + chr8.1:85967815-85967834 MS.gene39712:CDS 45.0%
!! CCTTCTAGCTTGCTACAAGA+TGG - chr8.1:85972218-85972237 None:intergenic 45.0%
!! TGGTGCATGGTGTTGGTATA+AGG + chr8.1:85966973-85966992 MS.gene39712:CDS 45.0%
!!! CTTGTGGGTCATAGTTTTGG+AGG + chr8.1:85967160-85967179 MS.gene39712:CDS 45.0%
!!! TTTTTTGTGGTGGCTTGTGG+TGG - chr8.1:85971792-85971811 None:intergenic 45.0%
!! ACAAAAAAAAAAAAAATATA+AGG + chr8.1:85971862-85971881 MS.gene39712:intron 5.0%
!! ATGTATAATATAATATAATA+TGG - chr8.1:85968319-85968338 None:intergenic 5.0%
!! ATTCAAAATTAAAATTATTA+GGG + chr8.1:85967519-85967538 MS.gene39712:intron 5.0%
!! CAAAAAAAAAAAAAAATATA+AGG + chr8.1:85971805-85971824 MS.gene39712:intron 5.0%
!! TTATATATTATATCATATAT+GGG - chr8.1:85971992-85972011 None:intergenic 5.0%
!!! ATTTGTTATTTTTTATTTTA+GGG + chr8.1:85970280-85970299 MS.gene39712:intron 5.0%
!!! GTATTATTTTTAAAAATAAA+TGG + chr8.1:85968755-85968774 MS.gene39712:intron 5.0%
!!! TATATTTTTTTTTTTTTTTG+TGG - chr8.1:85971805-85971824 None:intergenic 5.0%
!!! TATTTGTTATTTTTTATTTT+AGG + chr8.1:85970279-85970298 MS.gene39712:intron 5.0%
!!! TTATATTTTTTTTTTTTTTG+TGG - chr8.1:85971863-85971882 None:intergenic 5.0%
AAGCCAGTTGGAGGACTGTT+TGG - chr8.1:85967809-85967828 None:intergenic 50.0%
AAGGTCCGAGGTTCAAACCT+CGG + chr8.1:85971766-85971785 MS.gene39712:intron 50.0%
ACACCTCTGACTCAGGATCT+GGG - chr8.1:85969679-85969698 None:intergenic 50.0%
CATGCGCAGGATTTGACACT+TGG + chr8.1:85968378-85968397 MS.gene39712:intron 50.0%
CCAACCAATCTAGCAGTTGC+AGG - chr8.1:85972292-85972311 None:intergenic 50.0%
CCTGCAACTGCTAGATTGGT+TGG + chr8.1:85972289-85972308 MS.gene39712:CDS 50.0%
GTGCATGAGTCGACGTCAAT+TGG + chr8.1:85969617-85969636 MS.gene39712:CDS 50.0%
TACACCTCTGACTCAGGATC+TGG - chr8.1:85969680-85969699 None:intergenic 50.0%
TACCCTTCCATTCCTCTGCT+TGG - chr8.1:85968472-85968491 None:intergenic 50.0%
TATCCCAGATCCTGAGTCAG+AGG + chr8.1:85969673-85969692 MS.gene39712:CDS 50.0%
TCTTAACCCCCTCCTTGCTA+GGG - chr8.1:85968244-85968263 None:intergenic 50.0%
TTAGAAGGCCTTCCCTAGCA+AGG + chr8.1:85968229-85968248 MS.gene39712:intron 50.0%
! CTGATTCATGGTGGAAGCCA+TGG + chr8.1:85971014-85971033 MS.gene39712:CDS 50.0%
!! CTGTGGTGGATCTTGTTGAG+TGG - chr8.1:85967768-85967787 None:intergenic 50.0%
AAGGCCTTCCCTAGCAAGGA+GGG + chr8.1:85968233-85968252 MS.gene39712:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr8.1:85971711-85971730 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr8.1:85971708-85971727 MS.gene39712:intron 55.0%
CTTGTTCATGGAGCTGGCCA+TGG + chr8.1:85966953-85966972 MS.gene39712:CDS 55.0%
GAAGCCATGGTGCATGGTGT+TGG + chr8.1:85971027-85971046 MS.gene39712:CDS 55.0%
GGACCAAACAGTCCTCCAAC+TGG + chr8.1:85967803-85967822 MS.gene39712:CDS 55.0%
GTCTTAACCCCCTCCTTGCT+AGG - chr8.1:85968245-85968264 None:intergenic 55.0%
! ATGGTGGAAGCCATGGTGCA+TGG + chr8.1:85971021-85971040 MS.gene39712:CDS 55.0%
AACCCCCTCCTTGCTAGGGA+AGG - chr8.1:85968240-85968259 None:intergenic 60.0%
AGGCCTTCCCTAGCAAGGAG+GGG + chr8.1:85968234-85968253 MS.gene39712:intron 60.0%
ATGGAGCTGGCCATGGTGCA+TGG + chr8.1:85966960-85966979 MS.gene39712:CDS 60.0%
CTGGCCATGGTGCATGGTGT+TGG + chr8.1:85966966-85966985 MS.gene39712:CDS 60.0%
GAAGGCCTTCCCTAGCAAGG+AGG + chr8.1:85968232-85968251 MS.gene39712:intron 60.0%
GGTGGCCGAGGTTTGAACCT+CGG - chr8.1:85971774-85971793 None:intergenic 60.0%
GGCCTTCCCTAGCAAGGAGG+GGG + chr8.1:85968235-85968254 MS.gene39712:intron 65.0%
! GTGGTGGCTTGTGGTGGCCG+AGG - chr8.1:85971786-85971805 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 85966866 85972384 85966866 ID=MS.gene39712
chr8.1 mRNA 85966866 85972384 85966866 ID=MS.gene39712.t1;Parent=MS.gene39712
chr8.1 exon 85966866 85967294 85966866 ID=MS.gene39712.t1.exon1;Parent=MS.gene39712.t1
chr8.1 CDS 85966866 85967294 85966866 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
chr8.1 exon 85967746 85967883 85967746 ID=MS.gene39712.t1.exon2;Parent=MS.gene39712.t1
chr8.1 CDS 85967746 85967883 85967746 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
chr8.1 exon 85968387 85968581 85968387 ID=MS.gene39712.t1.exon3;Parent=MS.gene39712.t1
chr8.1 CDS 85968387 85968581 85968387 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
chr8.1 exon 85969519 85969694 85969519 ID=MS.gene39712.t1.exon4;Parent=MS.gene39712.t1
chr8.1 CDS 85969519 85969694 85969519 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
chr8.1 exon 85971001 85971352 85971001 ID=MS.gene39712.t1.exon5;Parent=MS.gene39712.t1
chr8.1 CDS 85971001 85971352 85971001 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
chr8.1 exon 85972226 85972384 85972226 ID=MS.gene39712.t1.exon6;Parent=MS.gene39712.t1
chr8.1 CDS 85972226 85972384 85972226 ID=cds.MS.gene39712.t1;Parent=MS.gene39712.t1
Gene Sequence

>MS.gene39712

ATGTTTAAACGGGGAAGACATGTTGTGTTCATTCTTCTCATCTTTATTCTTTCATTTTTCATTGGTGTTAATGGGAAACACTTTGTGCTTGTTCATGGAGCTGGCCATGGTGCATGGTGTTGGTATAAAGTTGCAACTATGCTTAAATCAGCTGGTCATAATGTTACAACTATTGACTTGGCTGCTTGTGGTATCAGTCCAATACAGGTTCAAGAGATTCATTCAAATATTTCAAAATATTATGAACCTTTGATATCATTTATGGATTCTCTTCCTCCAAAGGAAAAGGTGATTCTTGTGGGTCATAGTTTTGGAGGGATACCCTTATCTGTTGCTATGGAAAAGTTCCCTAAGAAAATTTCTCTTGCAGTTTTTGTCACTGCATTCGTGATTAGTGAAAACCTCAATTTTACAAGTTTACTTCAAGAGGTACTTGGCTTTGTCTTTTTCTAGATGTTAGTAAATAGTATTAGTAACCATGGTTATATATATTTATATTAATAAAAATTAGGCAAAATTATACATCAAGTCTTTTGAATTTGATTATTTTTTTAATTGAACTTTTATAATTTTTTTTCATATTGATCATTTAAGTTACAAAAAGTACGCATAGTTGTTAAGATATTATCTAATACCTTTTATTAGAAATTAACATTCAAAATTAAAATTATTAGGGTTCTTTATCCTTTTTAACATCTTCATTAACTCAGAAATTTAAACTCAAATGCTCCATAAAAAAGAATAAACTCGGAATCCCATGAAGAAAACCTAAAATACTTTAATGGATTTTAATTTAGAATTTTCTGAGTTTTAATTTTAATTGTGGAAGCTTATTGTCACATTTTTTTAATTTGTCTCATTTTGTATTATTGCCTCATAGAATCAGAGAAGATTAAATTCCACTCAACAAGATCCACCACAGTTAGTCTTCTCTGATGGACCAAACAGTCCTCCAACTGGCTTGTTATTTGGATCCAAACTCTTGGCATCCAATCTGTATCAATTATCGCCTAATGAGGTAAAAAAAATTGCTCTTGATTGAAAATTTGAAAAGGTAAATATTTTTACTTTAATTGAATCATTTGACTGCAATTAATATTTATTTAAGCATTATATAATAATGCAAAACTAATTAGATTGAAAATGTCTATAATTTTATTGTAGTTATTTTTTAAAGACGTATTTTAAAGTTCGTTTTAAACCTTTAGATTTATTGAATCAACCTTGACTTTTGTTAAAATAATTTGTCTAGGAGAATGTGAATTTCAATCTTGTTTTATAATAAGCATTAGTTAGACTTTTTTTTTTTTTGAGGGAAAGCATTAGTTAGACTTTATTTATGTCTCGATTAAACTTCAAATTATTAGAAGGCCTTCCCTAGCAAGGAGGGGGTTAAGACCAAAAATCTATACACTTATTTGTTATGTATACCCTAAGTTACCTTAACATACCATATTATATTATATTATACATATTTTATTAATTTACATTGAAGCCAATTATTGATGGTAACATGCGCAGGATTTGACACTTGGATCGTCGTTGGTGAGACCACATCCTATCTTTAATGACGAAAAACTGGTGCTGAAAGAAACAAGAGTTACCAAGCAGAGGAATGGAAGGGTACCAAAAGTCTTCATTATTTCCAAAGGAGACATTTTCATTAGAGAGGATCTGCAATTATGGATAATTGAGAGAACTGGTCCATATGATGAGGTGAAAGTGATAAAGGATTCAGATCACATGGTCATGTTCTCCAAACCTAAAAAACTCACCTCTCACATTCTAAAGACTGCTCACAAATATTAGATATGCTTTTATTGGTTTTTTGGATCAACAATTTTAAGACCTTAATGTTTATTATTAGTTTGTGATTTTATAGATGTTGTGTATTATTTTTAAAAATAAATGGAGAATATGGTGAATTTTTTTTTTTTTAATTGACACTTGATCATTTTAATAAAAACTATTGAAGGGATTTGAACATTTCAGATTATAACGTTAAACTCTTATTATTGAGCTGATATGATTTAGGATCATTTATGTATATATACTGATTCAATTATGTTCCAAACAAAATATGCTCATCACTTTTCATGCTTAGAGAGAGAAAACAAATGTAAAGTTATATGCAATAATGCAATTGATTTATTGTCTATTGAGTCTATGTTTTGGTGCATGAAACAGCAGAATAATTCATTTATTCATTTATGTGAGTTGTGATGTGTCATATATATATATATATATATATATATATGAGTGCCAACCTAACAGTTTGCATAGATAACTAATTTTTTGTTAGAACTTACGTATATATATGAAGAGAGTCCAACTCAAAAATTTAATCCATTATGTAAAAGAATTTCATGCATGTCTAAGTATCTTATTGAACACCTTTTTTTTCCGAATGATCATTGACCACTTTTATTTATTGATTCCTAACATTTGTATAACTAATTGACATATATATTATTTAATGAACTAAATAATTAATTAAGTTAAAATGCTAAAATAAAGTTCAAATATAATTATATCTACAATCTCATAAATGAGTTTTATATAGTTGAGTTAGAGACTAATAAAATTCAAATATCATCTTTCTTTTGAGATTCGAGTGGTGACTGTTTTTGATTTTGTATTAATGATTTGATAGACTCAATATTTGAATATTGGATGTACAGAACGTGGACGTAACCACAATCTTTGTATGTTCAGAGAAATCTTAATTAGGCTCATGAGCCAACTTGCAAAGTGCATGAGTCGACGTCAATTGGACAACGGTAAAGTTGTTGCTAACTGTAGTGGATTATCCCAGATCCTGAGTCAGAGGTGTAAAAAAATAACTTCATTAAAAAAATAGGATATTTATCATTAGGACATAGAAAGATCACACCTAGTTATAGCAACGATCTCTATAGACAAAGGAAAAAGAATTGGGTTAAATAAGTTTTTTGTCCGAATATAATAGAGATCTTATAAGAAATGTAACGAGTGTTGTTTAAAAAAAATGAAATTATAAGTAACTTTACTAAATTATCCTTCATTAAATATGGTATAGGGAAGTTTTTTTTAGGGATATGGTATAGGGAAGATAAATTTTAAAAAATTGAAAGATGAGAGAATATTATAATAAAGCGTATAATAGAAAGAAAAAAAAACATCATTAATGATTCATTGGCATTATAAAACGGCTTATAACTTGAGACAATTTTTTTCTTAAAACGACTTATAATTTAGGACGGATGGAGTATCTTCATGAGTTGAATCAAATTCAAATTCTACTATAATATCAATGTCTATTCTAAGTCTTTCATTATTGATAGAAATGAGTTAGGTTAAAATATAATATATTTTTTTCATCGAATGAAATTGATATACTCTCAAACGAAGATGATTCTAGGTCTTTAATAAATTATTTGTTATTTTTTATTTTAGGGTCTTGCTATCTTGTCCTTTAGAGCATAAGTTAAGGAATCCAAAATTAGATTTTTTTTGTATAAAACAATAAAATTTTGACTTTAAAAAGTTGAATAGAGTTGAATACACAACCTTTAAGACATTTATTTCTATTTTAAATTTCTTAGTATGTGCCCACGCATGTTAGCATTTGACTTTATTTTATATTATTTTAATATTTATGAAAAATTGTAAACATCAATATTTAAACCACTTTTGAGAGCTCCATATAACACACATCATTCTCAAATTACGTATTTAAACCATTATTTTAATTTTAAATTTTTTATATTAGTTATAACTTATACGTTTTTAGATGACGTTGACTTTTAAGAACATGTTGCACACTTGCGTTAAGTTAACTCCCAAATTAATAAAATTATATATACATTTCATATTTTCTCTGTAAATTGATTCCATATTTTCTCTGTAAATTGATTCTTTAGCCTAAAAAATGAATGATTAATAGAAAATAAGCCAAGAAGAATTTATTTTCATAGAACCTTCATGTGCATATATATAAAGGATCCATCGCGGTTCTAATAAGAATATATACGTATTGAGAAGAAAAATATCTATAACTAAAAAAGTTCTAAATTTATAAGATGATGAAAAGGGAGATTCACTTTGTGCACATTCTTTTGTTATTAATTCTTTGTCCTATAATTTGTGTTAATAGTGCAAATTTTGTGCTGATTCATGGTGGAAGCCATGGTGCATGGTGTTGGTATAAGGTTGCAACTATGCTTAAATCAGCTGGTCATAATGTTACAACAATTGAATTGGCTGGTTCAGGTATCAATCCAATACAAGTACAAGAGATTCATTCAACTTCAAAATATTATGAACCATTGATGTCATTTATGGAATCTCTTCCTCCAAATGAGAAGTTAATTCTTGTTGGTCATAGTCTTGGTGGGGTGTCTACATCTGTTGCTATGGAAAAGTTTCCACAAAAAATCTCAGTTGCAGTTTTTGTTACTGCTTATGTGCTTAGTCAAAACCTCTCATACCCTGTTGTTCTTCAAGAGGTAATCTTCTATACTCACATTTTTATTTTATTATTATTAGAAACTCCCACAAAATTAAATTATTCATAAAATCGACAATAATTTAGAGTTTCCTCAATTAAATTAAAAATAACAAAGTTTCATTCAAAATATTTTCTCAAGTGTCTACATATATATTACTTTGTTGGGTTAAATATAGTTTATCGTTTTGGGTTAAGTATATATACCTTTTGAATTTTATGGACTACCAATGACATATTTTAAAAATGGATCACTGATAACTAAAATTGAATTTTAAAAATTGAGTGAGGGAAAAAAACATATTTAATCCTTTTTTAGGAGTTGTTTATAATTGTTAAAAAATAAAGAGTAGTGTCCTCGTGAGCTTAGCTCAGTTGGTATTGACAATGCATAATATAATAATAATAATATATAAGGTCCGAGGTTCAAACCTCGGCCACCACAAGCCACCACAAAAAAAAAAAAAAATATAAGGTCCGAGGTTCAAACCTCGGCCACCACAAGCCACCACAAAAAAAAAAAAAATATAAGGTCCGAGGTTCAAACCTCGGCCACCACAAGCCACCACAAAAAAAAAATAAAGAGTTCCACAATTTTAAACTTTGATTAAAGAAACTTTGATTAAAGACAAAGAGGCCCATATATGATATAATATATAAGGTCCGAGGTTCAAACCTCGGCCACCACAAGCCACCACAAAAAAAAAAATAAAGAGTTCCACAATTTTAAACTTTGATTAAAGACAAAGAGGCCCATTCTCAATATTTTTACTTTTTAGGCTAATTAAAGACAATTTATTCTTGAAGAATTTTTTTCTCATATACTAACTGTCATTATATGCAATTTGAGTAACTTTTAGTTTCCATCTTGTAGCAAGCTAGAAGGATTAGTTCTTTAATGGACACAGAGTTTTTCTTCTTTGATGGACCCAACAAACCTGCAACTGCTAGATTGGTTGGACCAAAATTCATGGCATCCAAGATGTATCAATTATCACCATCTGAGGTGGAGTATATGTTAATGTTGGCATAA

Protein sequence

>MS.gene39712.t1

MFKRGRHVVFILLIFILSFFIGVNGKHFVLVHGAGHGAWCWYKVATMLKSAGHNVTTIDLAACGISPIQVQEIHSNISKYYEPLISFMDSLPPKEKVILVGHSFGGIPLSVAMEKFPKKISLAVFVTAFVISENLNFTSLLQENQRRLNSTQQDPPQLVFSDGPNSPPTGLLFGSKLLASNLYQLSPNEDLTLGSSLVRPHPIFNDEKLVLKETRVTKQRNGRVPKVFIISKGDIFIREDLQLWIIERTGPYDETQYLNIGCTERGRNHNLCMFREILIRLMSQLAKCMSRRQLDNGKVVANCSGLSQILSQSANFVLIHGGSHGAWCWYKVATMLKSAGHNVTTIELAGSGINPIQVQEIHSTSKYYEPLMSFMESLPPNEKLILVGHSLGGVSTSVAMEKFPQKISVAVFVTAYVLSQNLSYPVVLQEQARRISSLMDTEFFFFDGPNKPATARLVGPKFMASKMYQLSPSEVEYMLMLA