Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051131.t1 | XP_003627283.1 | 93.9 | 314 | 19 | 0 | 1 | 314 | 1 | 314 | 2.80E-170 | 607.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051131.t1 | Q9SPV4 | 54.3 | 324 | 129 | 6 | 1 | 314 | 1 | 315 | 7.1e-90 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051131.t1 | G7L6V5 | 93.9 | 314 | 19 | 0 | 1 | 314 | 1 | 314 | 2.0e-170 | 607.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene051131 | 0.853263 | 2.68E-61 | -1.69E-46 |
| MS.gene051131 | MS.gene052211 | 0.815324 | 9.80E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene05240 | 0.826406 | 2.76E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene05244 | 0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene053406 | 0.812921 | 3.32E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene054146 | 0.835341 | 1.78E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene054181 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene054277 | 0.809393 | 1.93E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene054742 | 0.832094 | 1.15E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene055240 | 0.808955 | 2.40E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene056590 | 0.83116 | 1.95E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene056591 | 0.82816 | 1.05E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene056920 | 0.815395 | 9.45E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene056922 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene057544 | 0.811238 | 7.74E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene057547 | 0.817643 | 2.96E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene059402 | 0.805991 | 1.02E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene059953 | 0.810966 | 8.86E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene059955 | 0.845832 | 3.17E-59 | -1.69E-46 |
| MS.gene051131 | MS.gene060087 | 0.804372 | 2.23E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene061777 | 0.801812 | 7.55E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene061889 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene063988 | 0.851387 | 9.17E-61 | -1.69E-46 |
| MS.gene051131 | MS.gene064313 | 0.828636 | 8.05E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene064807 | 0.814356 | 1.61E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene065240 | 0.805213 | 1.49E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene065426 | 0.822045 | 2.92E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene065724 | 0.82171 | 3.49E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene06593 | 0.810453 | 1.14E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene066417 | 0.811889 | 5.58E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene066500 | 0.834083 | 3.68E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene066602 | 0.854192 | 1.45E-61 | -1.69E-46 |
| MS.gene051131 | MS.gene066937 | 0.807054 | 6.10E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene06805 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene069480 | 0.808444 | 3.09E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene069482 | 0.852608 | 4.13E-61 | -1.69E-46 |
| MS.gene051131 | MS.gene070947 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene071220 | 0.812315 | 4.51E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene072293 | 0.802108 | 6.56E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene073526 | 0.857118 | 2.03E-62 | -1.69E-46 |
| MS.gene051131 | MS.gene074299 | 0.807712 | 4.42E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene07909 | 0.916187 | 2.41E-85 | -1.69E-46 |
| MS.gene051131 | MS.gene08733 | 0.809989 | 1.44E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene22359 | 0.813929 | 2.00E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene24862 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene25134 | 0.907856 | 3.22E-81 | -1.69E-46 |
| MS.gene051131 | MS.gene26294 | 0.806402 | 8.37E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene26296 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene26597 | 0.804837 | 1.78E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene28355 | 0.821419 | 4.08E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene28427 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene28548 | 0.822012 | 2.97E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene28594 | 0.833721 | 4.53E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene28602 | 0.805627 | 1.22E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene29826 | 0.805103 | 1.57E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene29995 | 0.830877 | 2.29E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene30387 | 0.940646 | 1.64E-100 | -1.69E-46 |
| MS.gene051131 | MS.gene31708 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene32143 | 0.80943 | 1.90E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene32446 | 0.810994 | 8.74E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene33445 | 0.806012 | 1.01E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene33496 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene35597 | 0.807348 | 5.28E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene37315 | 0.800437 | 1.44E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene37747 | 0.827782 | 1.29E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene37749 | 0.823455 | 1.37E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene37753 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene38435 | 0.860587 | 1.86E-63 | -1.69E-46 |
| MS.gene051131 | MS.gene39712 | 0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene40172 | 0.813823 | 2.11E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene40846 | 0.830424 | 2.96E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene41490 | 0.860654 | 1.78E-63 | -1.69E-46 |
| MS.gene051131 | MS.gene42005 | 0.827388 | 1.61E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene42080 | 0.821438 | 4.04E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene43874 | 0.827672 | 1.37E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene44712 | 0.846644 | 1.91E-59 | -1.69E-46 |
| MS.gene051131 | MS.gene44958 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene45228 | 0.8418 | 3.81E-58 | -1.69E-46 |
| MS.gene051131 | MS.gene45893 | 0.80083 | 1.20E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene46197 | 0.830453 | 2.91E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene46198 | 0.834312 | 3.22E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene47841 | 0.8099 | 1.51E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene48805 | 0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene48806 | 0.81205 | 5.15E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene48807 | 0.80014 | 1.66E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene49021 | 0.831071 | 2.06E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene50279 | 0.821563 | 3.78E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene50420 | 0.815267 | 1.01E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene50448 | 0.80398 | 2.69E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene50786 | 0.811067 | 8.43E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene51331 | 0.804273 | 2.34E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene51523 | 0.802016 | 6.85E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene51595 | 0.812735 | 3.65E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene52370 | 0.828886 | 7.01E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene53442 | 0.800389 | 1.47E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene54029 | 0.841857 | 3.68E-58 | -1.69E-46 |
| MS.gene051131 | MS.gene54312 | 0.810753 | 9.85E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene54574 | 0.82988 | 4.02E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene55079 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene57291 | 0.801658 | 8.11E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene57805 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene57807 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene59415 | 0.822881 | 1.87E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene60581 | 0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene61142 | 0.804943 | 1.69E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene63444 | 0.8465 | 2.09E-59 | -1.69E-46 |
| MS.gene051131 | MS.gene63647 | 0.805717 | 1.17E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene63913 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene63914 | 0.817916 | 2.57E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene64708 | 0.823385 | 1.43E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene65497 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene65823 | 0.82804 | 1.12E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene65833 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene65948 | 0.835018 | 2.14E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene66761 | 0.817174 | 3.78E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene67371 | 0.819514 | 1.12E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene68553 | 0.816172 | 6.34E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene69966 | 0.820256 | 7.55E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene70253 | 0.806956 | 6.40E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene71342 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene71346 | 0.822547 | 2.23E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene71350 | 0.826655 | 2.41E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene72073 | 0.834761 | 2.49E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene72372 | 0.806288 | 8.85E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene74774 | 0.831257 | 1.85E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene75472 | 0.812456 | 4.20E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene76090 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene76400 | 0.816268 | 6.03E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene76539 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene76677 | 0.814077 | 1.85E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene76738 | 0.813084 | 3.06E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene77032 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene77349 | 0.815926 | 7.20E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene77829 | 0.82186 | 3.23E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene78182 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene78424 | 0.802947 | 4.41E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene78657 | 0.814471 | 1.52E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene79445 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene79518 | 0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene79624 | 0.818881 | 1.55E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene79630 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene80293 | 0.825754 | 3.94E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene80468 | 0.836157 | 1.10E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene80744 | 0.866667 | 2.41E-65 | -1.69E-46 |
| MS.gene051131 | MS.gene81349 | 0.819017 | 1.45E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene81350 | 0.803788 | 2.95E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene81503 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene81504 | 0.841355 | 5.00E-58 | -1.69E-46 |
| MS.gene051131 | MS.gene81505 | 0.832272 | 1.04E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene81506 | 0.83535 | 1.77E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene81770 | 0.825159 | 5.46E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene81774 | 0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene82183 | 0.837821 | 4.15E-57 | -1.69E-46 |
| MS.gene051131 | MS.gene82244 | 0.822259 | 2.61E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene82245 | 0.8271 | 1.89E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene83239 | 0.809824 | 1.56E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene83490 | 0.801423 | 9.07E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene85154 | 0.808423 | 3.12E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene85485 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene85750 | 0.807137 | 5.85E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene87056 | 0.824982 | 6.01E-54 | -1.69E-46 |
| MS.gene051131 | MS.gene87222 | 0.837619 | 4.67E-57 | -1.69E-46 |
| MS.gene051131 | MS.gene87346 | 0.803065 | 4.16E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene87450 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene87750 | 0.834197 | 3.45E-56 | -1.69E-46 |
| MS.gene051131 | MS.gene88880 | 0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene88882 | 0.820165 | 7.92E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene89774 | 0.836958 | 6.89E-57 | -1.69E-46 |
| MS.gene051131 | MS.gene91222 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene91226 | 0.803646 | 3.16E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene92507 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene92886 | 0.803136 | 4.03E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene95596 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene95804 | 0.810162 | 1.32E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene96516 | 0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene051131 | MS.gene96947 | 0.806507 | 7.95E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene97597 | 0.818954 | 1.50E-52 | -1.69E-46 |
| MS.gene051131 | MS.gene97600 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene98322 | 0.823846 | 1.11E-53 | -1.69E-46 |
| MS.gene051131 | MS.gene99062 | 0.813418 | 2.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051131.t1 | MTR_8g020700 | 93.949 | 314 | 19 | 0 | 1 | 314 | 1 | 314 | 0.0 | 616 |
| MS.gene051131.t1 | MTR_8g020690 | 73.186 | 317 | 82 | 1 | 1 | 314 | 1 | 317 | 4.42e-174 | 486 |
| MS.gene051131.t1 | MTR_8g020700 | 90.588 | 255 | 24 | 0 | 1 | 255 | 1 | 255 | 6.16e-173 | 479 |
| MS.gene051131.t1 | MTR_8g076900 | 65.000 | 320 | 105 | 2 | 1 | 314 | 1 | 319 | 6.36e-152 | 430 |
| MS.gene051131.t1 | MTR_3g467270 | 61.890 | 328 | 109 | 4 | 1 | 314 | 1 | 326 | 1.31e-146 | 417 |
| MS.gene051131.t1 | MTR_4g018820 | 63.722 | 317 | 111 | 2 | 1 | 314 | 1 | 316 | 6.43e-146 | 415 |
| MS.gene051131.t1 | MTR_6g056070 | 62.222 | 315 | 117 | 2 | 1 | 314 | 1 | 314 | 4.25e-142 | 405 |
| MS.gene051131.t1 | MTR_5g020940 | 58.663 | 329 | 120 | 3 | 1 | 314 | 11 | 338 | 8.53e-140 | 400 |
| MS.gene051131.t1 | MTR_8g077040 | 58.683 | 334 | 111 | 3 | 1 | 314 | 1 | 327 | 3.23e-138 | 396 |
| MS.gene051131.t1 | MTR_8g076900 | 68.293 | 246 | 77 | 1 | 1 | 246 | 1 | 245 | 8.12e-124 | 355 |
| MS.gene051131.t1 | MTR_3g117060 | 42.216 | 334 | 165 | 4 | 1 | 314 | 1 | 326 | 1.13e-91 | 277 |
| MS.gene051131.t1 | MTR_5g046110 | 42.812 | 320 | 176 | 2 | 1 | 314 | 61 | 379 | 4.97e-86 | 265 |
| MS.gene051131.t1 | MTR_3g467560 | 40.367 | 327 | 177 | 4 | 1 | 314 | 25 | 346 | 2.05e-78 | 244 |
| MS.gene051131.t1 | MTR_8g077030 | 55.204 | 221 | 77 | 2 | 1 | 221 | 1 | 199 | 3.21e-77 | 245 |
| MS.gene051131.t1 | MTR_1g022465 | 42.604 | 338 | 167 | 7 | 1 | 314 | 1 | 335 | 2.77e-75 | 236 |
| MS.gene051131.t1 | MTR_1g022455 | 41.246 | 337 | 174 | 6 | 1 | 314 | 1 | 336 | 1.17e-74 | 234 |
| MS.gene051131.t1 | MTR_7g084620 | 39.450 | 327 | 170 | 7 | 6 | 314 | 6 | 322 | 1.53e-70 | 223 |
| MS.gene051131.t1 | MTR_7g084350 | 38.854 | 314 | 179 | 4 | 3 | 309 | 1 | 308 | 6.11e-69 | 219 |
| MS.gene051131.t1 | MTR_3g054330 | 33.445 | 299 | 189 | 4 | 1 | 289 | 10 | 308 | 7.82e-50 | 170 |
| MS.gene051131.t1 | MTR_1g108660 | 38.095 | 252 | 135 | 6 | 45 | 289 | 33 | 270 | 1.54e-46 | 160 |
| MS.gene051131.t1 | MTR_3g052700 | 32.573 | 307 | 185 | 7 | 1 | 289 | 13 | 315 | 2.19e-46 | 161 |
| MS.gene051131.t1 | MTR_7g084330 | 34.615 | 312 | 155 | 10 | 24 | 314 | 7 | 290 | 5.66e-46 | 159 |
| MS.gene051131.t1 | MTR_5g093900 | 32.903 | 310 | 182 | 8 | 1 | 289 | 13 | 317 | 6.77e-46 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051131.t1 | AT5G66430 | 43.986 | 291 | 157 | 2 | 9 | 298 | 1 | 286 | 9.99e-83 | 254 |
| MS.gene051131.t1 | AT5G04370 | 43.770 | 313 | 164 | 4 | 9 | 314 | 41 | 348 | 2.90e-80 | 249 |
| MS.gene051131.t1 | AT5G04370 | 43.770 | 313 | 164 | 4 | 9 | 314 | 60 | 367 | 7.50e-80 | 249 |
| MS.gene051131.t1 | AT5G04370 | 43.770 | 313 | 164 | 4 | 9 | 314 | 46 | 353 | 7.86e-80 | 248 |
| MS.gene051131.t1 | AT5G04380 | 45.907 | 281 | 146 | 2 | 9 | 288 | 38 | 313 | 1.71e-79 | 247 |
| MS.gene051131.t1 | AT3G11480 | 40.952 | 315 | 177 | 4 | 5 | 314 | 27 | 337 | 4.84e-78 | 243 |
| MS.gene051131.t1 | AT3G21950 | 41.284 | 327 | 170 | 5 | 6 | 314 | 3 | 325 | 1.07e-77 | 241 |
| MS.gene051131.t1 | AT5G38020 | 41.590 | 327 | 169 | 5 | 6 | 314 | 3 | 325 | 1.55e-77 | 241 |
| MS.gene051131.t1 | AT1G19640 | 42.363 | 347 | 166 | 6 | 1 | 314 | 1 | 346 | 2.57e-77 | 241 |
| MS.gene051131.t1 | AT4G36470 | 41.945 | 329 | 170 | 6 | 2 | 314 | 5 | 328 | 4.97e-77 | 240 |
| MS.gene051131.t1 | AT5G04380 | 45.552 | 281 | 140 | 3 | 9 | 288 | 34 | 302 | 2.93e-75 | 236 |
| MS.gene051131.t1 | AT5G04380 | 48.117 | 239 | 119 | 1 | 50 | 288 | 9 | 242 | 1.08e-73 | 229 |
| MS.gene051131.t1 | AT2G14060 | 42.761 | 297 | 165 | 3 | 3 | 298 | 8 | 300 | 2.22e-73 | 231 |
| MS.gene051131.t1 | AT3G21950 | 37.326 | 359 | 171 | 6 | 6 | 314 | 3 | 357 | 6.64e-71 | 225 |
| MS.gene051131.t1 | AT5G38020 | 42.500 | 280 | 140 | 4 | 52 | 314 | 11 | 286 | 2.24e-69 | 219 |
| MS.gene051131.t1 | AT2G14060 | 44.397 | 232 | 124 | 3 | 3 | 233 | 8 | 235 | 3.41e-62 | 198 |
| MS.gene051131.t1 | AT1G68040 | 39.310 | 290 | 154 | 5 | 9 | 288 | 13 | 290 | 4.21e-60 | 196 |
| MS.gene051131.t1 | AT1G15125 | 35.759 | 316 | 180 | 9 | 9 | 314 | 1 | 303 | 2.47e-52 | 176 |
| MS.gene051131.t1 | AT5G55250 | 32.000 | 300 | 193 | 5 | 1 | 289 | 13 | 312 | 3.25e-47 | 163 |
| MS.gene051131.t1 | AT4G26420 | 34.333 | 300 | 170 | 9 | 3 | 285 | 7 | 296 | 6.11e-46 | 159 |
| MS.gene051131.t1 | AT3G44840 | 36.491 | 285 | 161 | 6 | 9 | 286 | 7 | 278 | 1.07e-44 | 155 |
| MS.gene051131.t1 | AT5G37970 | 35.017 | 297 | 166 | 7 | 5 | 285 | 6 | 291 | 6.66e-44 | 154 |
| MS.gene051131.t1 | AT5G37990 | 34.868 | 304 | 171 | 8 | 5 | 292 | 6 | 298 | 1.10e-43 | 153 |
| MS.gene051131.t1 | AT5G55250 | 33.198 | 247 | 148 | 5 | 56 | 289 | 32 | 274 | 2.41e-42 | 149 |
| MS.gene051131.t1 | AT5G56300 | 31.438 | 299 | 185 | 6 | 3 | 288 | 18 | 309 | 2.88e-42 | 150 |
| MS.gene051131.t1 | AT5G38100 | 34.333 | 300 | 169 | 8 | 9 | 293 | 10 | 296 | 1.04e-41 | 148 |
| MS.gene051131.t1 | AT1G66720 | 33.217 | 286 | 170 | 5 | 9 | 285 | 9 | 282 | 2.21e-41 | 147 |
| MS.gene051131.t1 | AT3G44870 | 36.713 | 286 | 157 | 7 | 9 | 288 | 7 | 274 | 3.66e-41 | 147 |
| MS.gene051131.t1 | AT1G66700 | 32.550 | 298 | 175 | 6 | 9 | 296 | 9 | 290 | 1.92e-40 | 144 |
| MS.gene051131.t1 | AT3G44860 | 36.806 | 288 | 154 | 8 | 9 | 285 | 7 | 277 | 2.60e-40 | 144 |
| MS.gene051131.t1 | AT5G38780 | 32.877 | 292 | 172 | 7 | 9 | 286 | 10 | 291 | 8.71e-40 | 143 |
| MS.gene051131.t1 | AT5G38100 | 36.111 | 252 | 136 | 7 | 54 | 293 | 35 | 273 | 1.23e-39 | 142 |
| MS.gene051131.t1 | AT4G26420 | 37.445 | 227 | 122 | 7 | 3 | 218 | 7 | 224 | 1.38e-39 | 140 |
| MS.gene051131.t1 | AT1G15125 | 38.991 | 218 | 112 | 7 | 9 | 217 | 1 | 206 | 3.54e-39 | 138 |
| MS.gene051131.t1 | AT4G26420 | 37.557 | 221 | 118 | 7 | 9 | 218 | 1 | 212 | 2.02e-38 | 137 |
| MS.gene051131.t1 | AT5G38780 | 33.740 | 246 | 143 | 5 | 51 | 286 | 7 | 242 | 7.37e-37 | 134 |
| MS.gene051131.t1 | AT1G66700 | 37.387 | 222 | 116 | 5 | 9 | 220 | 9 | 217 | 3.42e-35 | 128 |
| MS.gene051131.t1 | AT5G38100 | 38.636 | 220 | 107 | 8 | 9 | 213 | 10 | 216 | 6.45e-34 | 125 |
| MS.gene051131.t1 | AT5G38100 | 38.636 | 220 | 107 | 8 | 9 | 213 | 10 | 216 | 7.14e-34 | 125 |
| MS.gene051131.t1 | AT1G66690 | 31.879 | 298 | 177 | 6 | 9 | 296 | 9 | 290 | 5.09e-32 | 122 |
Find 55 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATGGCTTCATCTCTTAT+TGG | 0.171047 | 8.3:-70451100 | None:intergenic |
| AAATGAAATCAAAACTAAAA+TGG | 0.175532 | 8.3:+70451351 | MS.gene051131:CDS |
| ATGGGTCCTTGTTACTTCTT+TGG | 0.197736 | 8.3:+70451370 | MS.gene051131:CDS |
| TGTTACTTCTTTGGGGTTCC+TGG | 0.212711 | 8.3:+70451379 | MS.gene051131:CDS |
| TAAAATATTGTTGCTACTAT+TGG | 0.215282 | 8.3:+70451981 | MS.gene051131:CDS |
| AACCTTGCAATTGCAGATTT+AGG | 0.230846 | 8.3:+70451151 | MS.gene051131:CDS |
| TGGGTCCTTGTTACTTCTTT+GGG | 0.234467 | 8.3:+70451371 | MS.gene051131:CDS |
| GCAGATTTAGGTTGTTCTTC+TGG | 0.263073 | 8.3:+70451163 | MS.gene051131:CDS |
| TATAGGGAAATGCAGTTTCT+TGG | 0.287192 | 8.3:+70451071 | MS.gene051131:intron |
| ATCATTTGCCATCAATCGTT+TGG | 0.330535 | 8.3:+70452917 | MS.gene051131:CDS |
| TCTTAATGGCATGGTCTTAG+AGG | 0.335242 | 8.3:+70452021 | MS.gene051131:CDS |
| AAAATATTGTTGCTACTATT+GGG | 0.341372 | 8.3:+70451982 | MS.gene051131:CDS |
| TCAATTTAAAAGAGACTTCT+CGG | 0.358277 | 8.3:+70451868 | MS.gene051131:CDS |
| TTGTTTGAAGCGTATGTAGA+TGG | 0.391779 | 8.3:+70452942 | MS.gene051131:CDS |
| GAGATGAATGGTTCAATTGT+TGG | 0.392209 | 8.3:-70451240 | None:intergenic |
| AAACAACTCCAAACGATTGA+TGG | 0.396917 | 8.3:-70452925 | None:intergenic |
| TATGCAACAGGGGATTATAA+AGG | 0.406446 | 8.3:+70452815 | MS.gene051131:intron |
| ATTCCTCTTACAGCCTTCAT+TGG | 0.426219 | 8.3:+70451449 | MS.gene051131:CDS |
| ACTTCCAACTCTACTTCATA+TGG | 0.429360 | 8.3:-70452882 | None:intergenic |
| TAGAAAGTGTGTTGGAGTAA+AGG | 0.429689 | 8.3:-70451126 | None:intergenic |
| AGCTGCTGTTCTTAATGGCA+TGG | 0.438077 | 8.3:+70452012 | MS.gene051131:CDS |
| AATGAAATCAAAACTAAAAT+GGG | 0.439241 | 8.3:+70451352 | MS.gene051131:CDS |
| TATGCTTTAACAACATTTGA+GGG | 0.450868 | 8.3:-70451839 | None:intergenic |
| ATGAAATGCAAACTTTGATC+AGG | 0.468189 | 8.3:-70451424 | None:intergenic |
| TTTGGTATCAGACATTATCA+TGG | 0.479161 | 8.3:+70451201 | MS.gene051131:CDS |
| GTTGGAGTAAAGGCTTGTTA+TGG | 0.479472 | 8.3:-70451116 | None:intergenic |
| CAGCCTTCATTGGCTATCAA+AGG | 0.487208 | 8.3:+70451459 | MS.gene051131:CDS |
| TATGGAGATGGATAATATTG+AGG | 0.497048 | 8.3:-70452864 | None:intergenic |
| GAGAGCTATGGCTGAACCAT+TGG | 0.503480 | 8.3:+70453007 | MS.gene051131:CDS |
| GTATGCTTTAACAACATTTG+AGG | 0.517154 | 8.3:-70451840 | None:intergenic |
| ATGGAGATGGATAATATTGA+GGG | 0.519174 | 8.3:-70452863 | None:intergenic |
| GGGTCCTTGTTACTTCTTTG+GGG | 0.519835 | 8.3:+70451372 | MS.gene051131:CDS |
| ATCTCCATATGAAGTAGAGT+TGG | 0.524694 | 8.3:+70452878 | MS.gene051131:CDS |
| GGGCAGGTAGTGCACATGAA+TGG | 0.526022 | 8.3:+70450078 | MS.gene051131:CDS |
| TAGCCAATGAAGGCTGTAAG+AGG | 0.535843 | 8.3:-70451452 | None:intergenic |
| CGTGCAGAGGAACTAGTTGA+AGG | 0.536965 | 8.3:+70451905 | MS.gene051131:CDS |
| AACTCTACTTCATATGGAGA+TGG | 0.539469 | 8.3:-70452876 | None:intergenic |
| GAGTTGGAAGTTCTCAATGA+AGG | 0.547450 | 8.3:+70452894 | MS.gene051131:CDS |
| TAACCTTTGATAGCCAATGA+AGG | 0.548055 | 8.3:-70451462 | None:intergenic |
| TCTTGTACTCGGGAGATGAA+TGG | 0.553449 | 8.3:-70451252 | None:intergenic |
| GTGCAGAGGAACTAGTTGAA+GGG | 0.554125 | 8.3:+70451906 | MS.gene051131:CDS |
| AACCTAAATCTGCAATTGCA+AGG | 0.554611 | 8.3:-70451153 | None:intergenic |
| TCATGTGCACTACCTGCCCC+AGG | 0.561033 | 8.3:-70450074 | None:intergenic |
| TGTGTAGTTGATGTAAATGT+TGG | 0.562245 | 8.3:-70451813 | None:intergenic |
| TTATTGTTCTCTATACCCTC+CGG | 0.563075 | 8.3:-70451788 | None:intergenic |
| GTGCACATGAATGGAGGTGA+TGG | 0.587528 | 8.3:+70450087 | MS.gene051131:CDS |
| TGCAGAGGAACTAGTTGAAG+GGG | 0.594526 | 8.3:+70451907 | MS.gene051131:CDS |
| GGGAATTATTAGGTTCCGGA+GGG | 0.604890 | 8.3:+70451773 | MS.gene051131:intron |
| TGCATGGTTCTAACAATGAG+TGG | 0.606537 | 8.3:+70451932 | MS.gene051131:CDS |
| GGGGAATTATTAGGTTCCGG+AGG | 0.634746 | 8.3:+70451772 | MS.gene051131:intron |
| CAGGTAGTGCACATGAATGG+AGG | 0.640551 | 8.3:+70450081 | MS.gene051131:CDS |
| GGAACCCCAAAGAAGTAACA+AGG | 0.641016 | 8.3:-70451376 | None:intergenic |
| TGCACGATTAATGAGAGCTA+TGG | 0.650401 | 8.3:+70452995 | MS.gene051131:CDS |
| ACTCTGTTATAGAAAGAACC+AGG | 0.668917 | 8.3:-70451397 | None:intergenic |
| GCAGAGGAACTAGTTGAAGG+GGG | 0.710839 | 8.3:+70451908 | MS.gene051131:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGATTAAATAATATCTA+AGG | - | chr8.3:70450856-70450875 | None:intergenic | 10.0% |
| !! | TAGATATTATTTAATCAATT+AGG | + | chr8.3:70450856-70450875 | MS.gene051131:intron | 10.0% |
| !! | TATACATAATAAATAACTTA+AGG | + | chr8.3:70452083-70452102 | MS.gene051131:intron | 10.0% |
| !! | TTAAGTTATTTATTATGTAT+AGG | - | chr8.3:70452084-70452103 | None:intergenic | 10.0% |
| !!! | ATAAAAAAACATTTTTTCTT+TGG | - | chr8.3:70450889-70450908 | None:intergenic | 10.0% |
| !!! | ATGTAATGTTTTTTTTTTTT+TGG | - | chr8.3:70451719-70451738 | None:intergenic | 10.0% |
| !!! | ATTTTTTTACGTATAATTTT+TGG | + | chr8.3:70450174-70450193 | MS.gene051131:intron | 10.0% |
| !!! | TAGTTTATTTTTTAAAACAA+TGG | - | chr8.3:70450635-70450654 | None:intergenic | 10.0% |
| !!! | TCATTTTAAACATTTTATTT+TGG | + | chr8.3:70450752-70450771 | MS.gene051131:intron | 10.0% |
| !!! | TGATTTTATTTGTTAATTAT+GGG | + | chr8.3:70451752-70451771 | MS.gene051131:intron | 10.0% |
| !!! | TTGATTTTATTTGTTAATTA+TGG | + | chr8.3:70451751-70451770 | MS.gene051131:intron | 10.0% |
| !! | AAATGAAATCAAAACTAAAA+TGG | + | chr8.3:70451351-70451370 | MS.gene051131:CDS | 15.0% |
| !! | AATGAAATCAAAACTAAAAT+GGG | + | chr8.3:70451352-70451371 | MS.gene051131:CDS | 15.0% |
| !! | TTAAAATATTATGATTTCCA+AGG | - | chr8.3:70452167-70452186 | None:intergenic | 15.0% |
| !! | TTCTTTATTATGTTGATATA+GGG | + | chr8.3:70451055-70451074 | MS.gene051131:intron | 15.0% |
| !! | TTTCTTTATTATGTTGATAT+AGG | + | chr8.3:70451054-70451073 | MS.gene051131:intron | 15.0% |
| !!! | AACAATGATTGTAATTTTTT+AGG | - | chr8.3:70452661-70452680 | None:intergenic | 15.0% |
| !!! | AATTAAAAAAACTTGTTTGA+AGG | - | chr8.3:70451001-70451020 | None:intergenic | 15.0% |
| !!! | GATTTTATTTGTTAATTATG+GGG | + | chr8.3:70451753-70451772 | MS.gene051131:intron | 15.0% |
| !! | AAAATATTGTTGCTACTATT+GGG | + | chr8.3:70451982-70452001 | MS.gene051131:CDS | 20.0% |
| !! | AATCATTGTTGTCTTAATTT+AGG | + | chr8.3:70452671-70452690 | MS.gene051131:intron | 20.0% |
| !! | AGTTCTTAATGATATTATTG+TGG | - | chr8.3:70450552-70450571 | None:intergenic | 20.0% |
| !! | ATCATTGTTGTCTTAATTTA+GGG | + | chr8.3:70452672-70452691 | MS.gene051131:intron | 20.0% |
| !! | ATTGAAAAATATCTTGTACT+CGG | - | chr8.3:70451266-70451285 | None:intergenic | 20.0% |
| !! | GAAACACAATATAAAATATG+AGG | - | chr8.3:70451497-70451516 | None:intergenic | 20.0% |
| !! | GTTATTTATTATGTATAGGA+AGG | - | chr8.3:70452080-70452099 | None:intergenic | 20.0% |
| !! | GTTCTTAATGATATTATTGT+GGG | - | chr8.3:70450551-70450570 | None:intergenic | 20.0% |
| !! | TAAAATATTGTTGCTACTAT+TGG | + | chr8.3:70451981-70452000 | MS.gene051131:CDS | 20.0% |
| !! | TTTAAATTGAGATTGTCTAT+AGG | + | chr8.3:70450479-70450498 | MS.gene051131:intron | 20.0% |
| !!! | AATAACATTAACTACCTTTT+TGG | + | chr8.3:70450717-70450736 | MS.gene051131:intron | 20.0% |
| !!! | ATATTTTTCAATGATGTTTC+AGG | + | chr8.3:70451274-70451293 | MS.gene051131:CDS | 20.0% |
| !!! | CATATTTAACGGTTTTAAAA+CGG | + | chr8.3:70450607-70450626 | MS.gene051131:intron | 20.0% |
| !!! | TTTTAGGATATCTACATTTA+TGG | - | chr8.3:70452356-70452375 | None:intergenic | 20.0% |
| ! | AAGAACTATCTTTAATGGTA+TGG | - | chr8.3:70450219-70450238 | None:intergenic | 25.0% |
| ! | AATATGTACAAATAGGAAGT+TGG | - | chr8.3:70452309-70452328 | None:intergenic | 25.0% |
| ! | ATATGTACAAATAGGAAGTT+GGG | - | chr8.3:70452308-70452327 | None:intergenic | 25.0% |
| ! | GAATGAAAAATATCACAACT+TGG | - | chr8.3:70452334-70452353 | None:intergenic | 25.0% |
| ! | GTTAATTATGGGGAATTATT+AGG | + | chr8.3:70451763-70451782 | MS.gene051131:intron | 25.0% |
| ! | TACCAATTGAACTACATTTA+CGG | - | chr8.3:70451598-70451617 | None:intergenic | 25.0% |
| ! | TATGCTTTAACAACATTTGA+GGG | - | chr8.3:70451842-70451861 | None:intergenic | 25.0% |
| ! | TCAATTTAAAAGAGACTTCT+CGG | + | chr8.3:70451868-70451887 | MS.gene051131:CDS | 25.0% |
| ! | TTCTACGATTGCATATTTAA+CGG | + | chr8.3:70450596-70450615 | MS.gene051131:intron | 25.0% |
| ! | TTGAAAAATATCTTGTACTC+GGG | - | chr8.3:70451265-70451284 | None:intergenic | 25.0% |
| ! | TTGTTCAAAAACATACTCAA+CGG | - | chr8.3:70452584-70452603 | None:intergenic | 25.0% |
| !! | ATATGATTTTTGTATGCAAC+AGG | + | chr8.3:70452803-70452822 | MS.gene051131:intron | 25.0% |
| !! | ATCGATTAAACCGATTTAAA+AGG | + | chr8.3:70452487-70452506 | MS.gene051131:intron | 25.0% |
| !! | CAACAATATTTTATGTCACA+TGG | - | chr8.3:70451974-70451993 | None:intergenic | 25.0% |
| !! | GGATATGAGAAATTTGATTT+GGG | + | chr8.3:70450398-70450417 | MS.gene051131:intron | 25.0% |
| !! | TATGATTTTTGTATGCAACA+GGG | + | chr8.3:70452804-70452823 | MS.gene051131:intron | 25.0% |
| !!! | AGAAATTTGATTTGGGATTT+TGG | + | chr8.3:70450405-70450424 | MS.gene051131:intron | 25.0% |
| !!! | GAAATTTGATTTGGGATTTT+GGG | + | chr8.3:70450406-70450425 | MS.gene051131:intron | 25.0% |
| !!! | GGTTTCTTTGATTAGTTTTA+GGG | + | chr8.3:70452697-70452716 | MS.gene051131:intron | 25.0% |
| !!! | GTATAATTTTTGGAAGATGA+AGG | + | chr8.3:70450184-70450203 | MS.gene051131:intron | 25.0% |
| ACCAATTGAACTACATTTAC+GGG | - | chr8.3:70451597-70451616 | None:intergenic | 30.0% | |
| AGATTCACACATATTATGTG+TGG | - | chr8.3:70451678-70451697 | None:intergenic | 30.0% | |
| ATGAAATGCAAACTTTGATC+AGG | - | chr8.3:70451427-70451446 | None:intergenic | 30.0% | |
| ATGGAGATGGATAATATTGA+GGG | - | chr8.3:70452866-70452885 | None:intergenic | 30.0% | |
| CAACAACATTTAACTATTGC+TGG | + | chr8.3:70452535-70452554 | MS.gene051131:intron | 30.0% | |
| CAGCAATAGTTAAATGTTGT+TGG | - | chr8.3:70452537-70452556 | None:intergenic | 30.0% | |
| CTTGGTGAATATGTACAAAT+AGG | - | chr8.3:70452316-70452335 | None:intergenic | 30.0% | |
| GGCAAAAGAACTATCTTTAA+TGG | - | chr8.3:70450224-70450243 | None:intergenic | 30.0% | |
| GGGATATGAGAAATTTGATT+TGG | + | chr8.3:70450397-70450416 | MS.gene051131:intron | 30.0% | |
| GTATGCTTTAACAACATTTG+AGG | - | chr8.3:70451843-70451862 | None:intergenic | 30.0% | |
| TATGGAGATGGATAATATTG+AGG | - | chr8.3:70452867-70452886 | None:intergenic | 30.0% | |
| TGCAAAAAACTCATTTCATC+AGG | + | chr8.3:70450122-70450141 | MS.gene051131:CDS | 30.0% | |
| TTCCAGGGATAATTTATACA+GGG | + | chr8.3:70451620-70451639 | MS.gene051131:intron | 30.0% | |
| TTTGGTATCAGACATTATCA+TGG | + | chr8.3:70451201-70451220 | MS.gene051131:CDS | 30.0% | |
| ! | AAGGCAAAGTTACTCTTTTT+GGG | - | chr8.3:70452148-70452167 | None:intergenic | 30.0% |
| ! | ATGATTTTTGTATGCAACAG+GGG | + | chr8.3:70452805-70452824 | MS.gene051131:intron | 30.0% |
| ! | CTTTAAGAAATTGCTCATCT+CGG | - | chr8.3:70452616-70452635 | None:intergenic | 30.0% |
| ! | CTTTTCATAACCAGAATAGA+TGG | - | chr8.3:70450261-70450280 | None:intergenic | 30.0% |
| ! | GATACCAAAAACAAAGTGTT+TGG | - | chr8.3:70451190-70451209 | None:intergenic | 30.0% |
| ! | GATTTTATGAGCAACCAAAA+AGG | - | chr8.3:70450734-70450753 | None:intergenic | 30.0% |
| ! | GGTTCAATCACCTTTTAAAT+CGG | - | chr8.3:70452500-70452519 | None:intergenic | 30.0% |
| ! | TAAAGATAGTTCTTTTGCCA+TGG | + | chr8.3:70450225-70450244 | MS.gene051131:intron | 30.0% |
| ! | TGTGTAGTTGATGTAAATGT+TGG | - | chr8.3:70451816-70451835 | None:intergenic | 30.0% |
| ! | TTGTTGTCTTAATTTAGGGT+CGG | + | chr8.3:70452676-70452695 | MS.gene051131:intron | 30.0% |
| !! | AAGGTTTTTAGAAAGTGTGT+TGG | - | chr8.3:70451137-70451156 | None:intergenic | 30.0% |
| !! | TGATTTTAAGAGACAGAGAA+TGG | + | chr8.3:70450942-70450961 | MS.gene051131:intron | 30.0% |
| !!! | CGGTTTCTTTGATTAGTTTT+AGG | + | chr8.3:70452696-70452715 | MS.gene051131:intron | 30.0% |
| AAACAACTCCAAACGATTGA+TGG | - | chr8.3:70452928-70452947 | None:intergenic | 35.0% | |
| AACCTAAATCTGCAATTGCA+AGG | - | chr8.3:70451156-70451175 | None:intergenic | 35.0% | |
| AACCTTGCAATTGCAGATTT+AGG | + | chr8.3:70451151-70451170 | MS.gene051131:CDS | 35.0% | |
| AACTCTACTTCATATGGAGA+TGG | - | chr8.3:70452879-70452898 | None:intergenic | 35.0% | |
| ACATATTATGTGTGGAGAAG+TGG | - | chr8.3:70451670-70451689 | None:intergenic | 35.0% | |
| ACTCTGTTATAGAAAGAACC+AGG | - | chr8.3:70451400-70451419 | None:intergenic | 35.0% | |
| ACTTCCAACTCTACTTCATA+TGG | - | chr8.3:70452885-70452904 | None:intergenic | 35.0% | |
| ATATTATGTGTGGAGAAGTG+GGG | - | chr8.3:70451668-70451687 | None:intergenic | 35.0% | |
| ATCATTTGCCATCAATCGTT+TGG | + | chr8.3:70452917-70452936 | MS.gene051131:CDS | 35.0% | |
| ATCTCCATATGAAGTAGAGT+TGG | + | chr8.3:70452878-70452897 | MS.gene051131:CDS | 35.0% | |
| CAAAAAGAGTAACTTTGCCT+TGG | + | chr8.3:70452147-70452166 | MS.gene051131:intron | 35.0% | |
| CATATTATGTGTGGAGAAGT+GGG | - | chr8.3:70451669-70451688 | None:intergenic | 35.0% | |
| CTTCCAGGGATAATTTATAC+AGG | + | chr8.3:70451619-70451638 | MS.gene051131:intron | 35.0% | |
| GAGATGAATGGTTCAATTGT+TGG | - | chr8.3:70451243-70451262 | None:intergenic | 35.0% | |
| GGCGAATTTCTCGAATTTAA+AGG | - | chr8.3:70450295-70450314 | None:intergenic | 35.0% | |
| GTTATGGCTTCATCTCTTAT+TGG | - | chr8.3:70451103-70451122 | None:intergenic | 35.0% | |
| TACTCAACGGCAATTAATTG+TGG | - | chr8.3:70452571-70452590 | None:intergenic | 35.0% | |
| TATAGGGAAATGCAGTTTCT+TGG | + | chr8.3:70451071-70451090 | MS.gene051131:intron | 35.0% | |
| TATGCAACAGGGGATTATAA+AGG | + | chr8.3:70452815-70452834 | MS.gene051131:intron | 35.0% | |
| TATGGGGAATTATTAGGTTC+CGG | + | chr8.3:70451769-70451788 | MS.gene051131:intron | 35.0% | |
| TATGTGTGAATCTAGTCACT+AGG | + | chr8.3:70451685-70451704 | MS.gene051131:intron | 35.0% | |
| TCCAGGGATAATTTATACAG+GGG | + | chr8.3:70451621-70451640 | MS.gene051131:intron | 35.0% | |
| TCCCGTAAATGTAGTTCAAT+TGG | + | chr8.3:70451593-70451612 | MS.gene051131:intron | 35.0% | |
| TTATTGTTCTCTATACCCTC+CGG | - | chr8.3:70451791-70451810 | None:intergenic | 35.0% | |
| TTGCTCAAAAACATACCCAA+AGG | + | chr8.3:70452406-70452425 | MS.gene051131:intron | 35.0% | |
| TTGTTGGACACTTACTAAAG+TGG | - | chr8.3:70452521-70452540 | None:intergenic | 35.0% | |
| ! | CAAGGCAAAGTTACTCTTTT+TGG | - | chr8.3:70452149-70452168 | None:intergenic | 35.0% |
| ! | TAACCTTTGATAGCCAATGA+AGG | - | chr8.3:70451465-70451484 | None:intergenic | 35.0% |
| ! | TAGAAAGTGTGTTGGAGTAA+AGG | - | chr8.3:70451129-70451148 | None:intergenic | 35.0% |
| ! | TCTTTAACATGTGCCATTGA+GGG | + | chr8.3:70452239-70452258 | MS.gene051131:intron | 35.0% |
| ! | TTCTTTAACATGTGCCATTG+AGG | + | chr8.3:70452238-70452257 | MS.gene051131:intron | 35.0% |
| ! | TTGTTTGAAGCGTATGTAGA+TGG | + | chr8.3:70452942-70452961 | MS.gene051131:CDS | 35.0% |
| !! | CATGTTAACTTGTGTCCTAA+GGG | + | chr8.3:70452108-70452127 | MS.gene051131:intron | 35.0% |
| !! | CTTTTAGCTGCTGTTCTTAA+TGG | + | chr8.3:70452007-70452026 | MS.gene051131:CDS | 35.0% |
| !! | TCATGTTAACTTGTGTCCTA+AGG | + | chr8.3:70452107-70452126 | MS.gene051131:intron | 35.0% |
| !! | TTTTGAACACTAGTTTCTCG+AGG | - | chr8.3:70450361-70450380 | None:intergenic | 35.0% |
| !!! | TGAGCAACTGTTCACTTTTT+AGG | - | chr8.3:70452372-70452391 | None:intergenic | 35.0% |
| !!! | TGGACCAAACACTTTGTTTT+TGG | + | chr8.3:70451183-70451202 | MS.gene051131:CDS | 35.0% |
| ATGCATTGAGCCATCTATTC+TGG | + | chr8.3:70450248-70450267 | MS.gene051131:intron | 40.0% | |
| ATTCCTCTTACAGCCTTCAT+TGG | + | chr8.3:70451449-70451468 | MS.gene051131:CDS | 40.0% | |
| CAGGTATGTGTGTGTGTATA+AGG | + | chr8.3:70450141-70450160 | MS.gene051131:intron | 40.0% | |
| GAGTTGGAAGTTCTCAATGA+AGG | + | chr8.3:70452894-70452913 | MS.gene051131:CDS | 40.0% | |
| GATAATTTATACAGGGGCCA+GGG | + | chr8.3:70451627-70451646 | MS.gene051131:intron | 40.0% | |
| GTTTCTTAACATGTGCCCTT+AGG | - | chr8.3:70452126-70452145 | None:intergenic | 40.0% | |
| TGCACGATTAATGAGAGCTA+TGG | + | chr8.3:70452995-70453014 | MS.gene051131:CDS | 40.0% | |
| TGTTAAACTTGTGCCCTCAA+TGG | - | chr8.3:70452255-70452274 | None:intergenic | 40.0% | |
| ! | AGTTCAATTGGTAGCTTCCA+GGG | + | chr8.3:70451605-70451624 | MS.gene051131:intron | 40.0% |
| ! | ATGGGTCCTTGTTACTTCTT+TGG | + | chr8.3:70451370-70451389 | MS.gene051131:CDS | 40.0% |
| ! | TAGTTCAATTGGTAGCTTCC+AGG | + | chr8.3:70451604-70451623 | MS.gene051131:intron | 40.0% |
| ! | TCTTAATGGCATGGTCTTAG+AGG | + | chr8.3:70452021-70452040 | MS.gene051131:CDS | 40.0% |
| ! | TGGGTCCTTGTTACTTCTTT+GGG | + | chr8.3:70451371-70451390 | MS.gene051131:CDS | 40.0% |
| !! | GCAGATTTAGGTTGTTCTTC+TGG | + | chr8.3:70451163-70451182 | MS.gene051131:CDS | 40.0% |
| !! | GTTGGAGTAAAGGCTTGTTA+TGG | - | chr8.3:70451119-70451138 | None:intergenic | 40.0% |
| !! | TGCATGGTTCTAACAATGAG+TGG | + | chr8.3:70451932-70451951 | MS.gene051131:CDS | 40.0% |
| !! | TTTTCTCAAGTATCGTGCAG+AGG | + | chr8.3:70451892-70451911 | MS.gene051131:CDS | 40.0% |
| AAAACCCGACACTGAGAGAA+GGG | + | chr8.3:70450377-70450396 | MS.gene051131:intron | 45.0% | |
| AGCTGCTGTTCTTAATGGCA+TGG | + | chr8.3:70452012-70452031 | MS.gene051131:CDS | 45.0% | |
| ATATCCCTTCTCTCAGTGTC+GGG | - | chr8.3:70450384-70450403 | None:intergenic | 45.0% | |
| CAACGACAGCTAACTAACGT+TGG | - | chr8.3:70452455-70452474 | None:intergenic | 45.0% | |
| CAACGTTAGTTAGCTGTCGT+TGG | + | chr8.3:70452453-70452472 | MS.gene051131:intron | 45.0% | |
| CATATCCCTTCTCTCAGTGT+CGG | - | chr8.3:70450385-70450404 | None:intergenic | 45.0% | |
| CTAACGTTGGAAAAGCAGAG+CGG | - | chr8.3:70452442-70452461 | None:intergenic | 45.0% | |
| CTATAGGCTATAGCATCTGC+TGG | + | chr8.3:70450495-70450514 | MS.gene051131:intron | 45.0% | |
| GCCCCTGTATAAATTATCCC+TGG | - | chr8.3:70451625-70451644 | None:intergenic | 45.0% | |
| GGAACCCCAAAGAAGTAACA+AGG | - | chr8.3:70451379-70451398 | None:intergenic | 45.0% | |
| GGATAATTTATACAGGGGCC+AGG | + | chr8.3:70451626-70451645 | MS.gene051131:intron | 45.0% | |
| GGGAATTATTAGGTTCCGGA+GGG | + | chr8.3:70451773-70451792 | MS.gene051131:intron | 45.0% | |
| GTGCAGAGGAACTAGTTGAA+GGG | + | chr8.3:70451906-70451925 | MS.gene051131:CDS | 45.0% | |
| TAGATGGCTCAATGCATCCA+TGG | - | chr8.3:70450245-70450264 | None:intergenic | 45.0% | |
| TAGCCAATGAAGGCTGTAAG+AGG | - | chr8.3:70451455-70451474 | None:intergenic | 45.0% | |
| TCTTGTACTCGGGAGATGAA+TGG | - | chr8.3:70451255-70451274 | None:intergenic | 45.0% | |
| TGCAGAGGAACTAGTTGAAG+GGG | + | chr8.3:70451907-70451926 | MS.gene051131:CDS | 45.0% | |
| ! | CAGCCTTCATTGGCTATCAA+AGG | + | chr8.3:70451459-70451478 | MS.gene051131:CDS | 45.0% |
| ! | GGGTCCTTGTTACTTCTTTG+GGG | + | chr8.3:70451372-70451391 | MS.gene051131:CDS | 45.0% |
| !! | TGTTACTTCTTTGGGGTTCC+TGG | + | chr8.3:70451379-70451398 | MS.gene051131:CDS | 45.0% |
| !! | ATTACAATATATTTAAATTA+TGG | - | chr8.3:70452282-70452301 | None:intergenic | 5.0% |
| !!! | ACTTTTTTATTTTTTAAAAA+AGG | + | chr8.3:70450569-70450588 | MS.gene051131:intron | 5.0% |
| !!! | ATTTTTTAAAATTTTTCAAA+AGG | + | chr8.3:70450675-70450694 | MS.gene051131:intron | 5.0% |
| ACTAGTTGAAGGGGGTTGCA+TGG | + | chr8.3:70451916-70451935 | MS.gene051131:CDS | 50.0% | |
| AGCGGCAGCTAATTGCCTTT+GGG | - | chr8.3:70452424-70452443 | None:intergenic | 50.0% | |
| CAAAACCCGACACTGAGAGA+AGG | + | chr8.3:70450376-70450395 | MS.gene051131:intron | 50.0% | |
| CAGGTAGTGCACATGAATGG+AGG | + | chr8.3:70450081-70450100 | MS.gene051131:CDS | 50.0% | |
| CGTGCAGAGGAACTAGTTGA+AGG | + | chr8.3:70451905-70451924 | MS.gene051131:CDS | 50.0% | |
| CTCTCAACCAAGTGACCTCT+CGG | - | chr8.3:70450325-70450344 | None:intergenic | 50.0% | |
| GCAGAGGAACTAGTTGAAGG+GGG | + | chr8.3:70451908-70451927 | MS.gene051131:CDS | 50.0% | |
| GGGGAATTATTAGGTTCCGG+AGG | + | chr8.3:70451772-70451791 | MS.gene051131:intron | 50.0% | |
| GTGCACATGAATGGAGGTGA+TGG | + | chr8.3:70450087-70450106 | MS.gene051131:CDS | 50.0% | |
| TCTCAACCAAGTGACCTCTC+GGG | - | chr8.3:70450324-70450343 | None:intergenic | 50.0% | |
| AAGTGACCTCTCGGGAGACT+GGG | - | chr8.3:70450316-70450335 | None:intergenic | 55.0% | |
| GAGCGGCAGCTAATTGCCTT+TGG | - | chr8.3:70452425-70452444 | None:intergenic | 55.0% | |
| GGGCAGGTAGTGCACATGAA+TGG | + | chr8.3:70450078-70450097 | MS.gene051131:CDS | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | - | chr8.3:70451661-70451680 | None:intergenic | 55.0% | |
| TGTGGAGAAGTGGGGAATCC+GGG | - | chr8.3:70451660-70451679 | None:intergenic | 55.0% | |
| AATTCGCCCAGTCTCCCGAG+AGG | + | chr8.3:70450307-70450326 | MS.gene051131:intron | 60.0% | |
| CAAGTGACCTCTCGGGAGAC+TGG | - | chr8.3:70450317-70450336 | None:intergenic | 60.0% | |
| CAGTCTCCCGAGAGGTCACT+TGG | + | chr8.3:70450315-70450334 | MS.gene051131:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | - | chr8.3:70451659-70451678 | None:intergenic | 60.0% | |
| TCATGTGCACTACCTGCCCC+AGG | - | chr8.3:70450077-70450096 | None:intergenic | 60.0% | |
| GGAATCCGGGGTTCGAACCC+TGG | - | chr8.3:70451647-70451666 | None:intergenic | 65.0% | |
| AGGGGCCAGGGTTCGAACCC+CGG | + | chr8.3:70451639-70451658 | MS.gene051131:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 70450069 | 70453028 | 70450069 | ID=MS.gene051131 |
| chr8.3 | mRNA | 70450069 | 70453028 | 70450069 | ID=MS.gene051131.t1;Parent=MS.gene051131 |
| chr8.3 | exon | 70450069 | 70450143 | 70450069 | ID=MS.gene051131.t1.exon1;Parent=MS.gene051131.t1 |
| chr8.3 | CDS | 70450069 | 70450143 | 70450069 | ID=cds.MS.gene051131.t1;Parent=MS.gene051131.t1 |
| chr8.3 | exon | 70451076 | 70451480 | 70451076 | ID=MS.gene051131.t1.exon2;Parent=MS.gene051131.t1 |
| chr8.3 | CDS | 70451076 | 70451480 | 70451076 | ID=cds.MS.gene051131.t1;Parent=MS.gene051131.t1 |
| chr8.3 | exon | 70451785 | 70452042 | 70451785 | ID=MS.gene051131.t1.exon3;Parent=MS.gene051131.t1 |
| chr8.3 | CDS | 70451785 | 70452042 | 70451785 | ID=cds.MS.gene051131.t1;Parent=MS.gene051131.t1 |
| chr8.3 | exon | 70452825 | 70453028 | 70452825 | ID=MS.gene051131.t1.exon4;Parent=MS.gene051131.t1 |
| chr8.3 | CDS | 70452825 | 70453028 | 70452825 | ID=cds.MS.gene051131.t1;Parent=MS.gene051131.t1 |
| Gene Sequence |
| Protein sequence |
