AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39834.t1 MTR_5g087620 96.545 492 17 0 2 493 5 496 0.0 990
MS.gene39834.t1 MTR_2g098430 47.262 493 237 8 1 487 1 476 1.74e-151 441
MS.gene39834.t1 MTR_8g066610 33.063 493 297 12 7 490 9 477 4.95e-78 252
MS.gene39834.t1 MTR_5g045970 33.532 504 294 17 7 493 16 495 1.39e-73 241
MS.gene39834.t1 MTR_7g117405 33.600 500 291 14 6 492 11 482 6.10e-73 239
MS.gene39834.t1 MTR_0536s0020 32.530 498 290 14 3 486 14 479 9.35e-73 238
MS.gene39834.t1 MTR_7g102560 32.812 512 283 16 7 492 9 485 1.33e-72 238
MS.gene39834.t1 MTR_7g102550 33.198 494 288 15 7 481 9 479 4.56e-72 237
MS.gene39834.t1 MTR_7g055710 30.754 491 308 10 7 485 11 481 5.75e-72 237
MS.gene39834.t1 MTR_4g485630 31.452 496 297 14 7 490 9 473 2.76e-71 234
MS.gene39834.t1 MTR_4g117980 31.855 496 291 14 12 488 16 483 7.98e-71 233
MS.gene39834.t1 MTR_7g070740 30.339 501 317 10 2 490 6 486 1.72e-70 233
MS.gene39834.t1 MTR_5g045960 31.496 508 303 17 4 492 6 487 2.98e-70 232
MS.gene39834.t1 MTR_7g102460 32.422 512 300 17 1 492 1 486 5.20e-70 232
MS.gene39834.t1 MTR_1g062380 33.004 506 295 18 7 493 16 496 1.45e-69 230
MS.gene39834.t1 MTR_4g117960 31.098 492 295 11 12 486 16 480 2.20e-68 227
MS.gene39834.t1 MTR_6g035265 30.894 492 293 13 12 488 16 475 3.25e-68 226
MS.gene39834.t1 MTR_7g070780 30.832 493 306 12 7 487 11 480 3.76e-68 227
MS.gene39834.t1 MTR_4g108250 29.000 500 319 10 7 490 11 490 4.27e-67 224
MS.gene39834.t1 MTR_4g485590 34.135 416 229 10 7 422 9 379 5.62e-67 221
MS.gene39834.t1 MTR_4g117890 30.279 502 303 13 3 490 9 477 2.62e-66 221
MS.gene39834.t1 MTR_7g070800 30.600 500 312 11 3 490 2 478 4.20e-66 221
MS.gene39834.t1 MTR_7g070660 28.600 493 315 9 7 486 11 479 6.05e-66 221
MS.gene39834.t1 MTR_7g070810 29.495 495 306 10 7 486 9 475 7.03e-66 220
MS.gene39834.t1 MTR_4g024020 30.845 509 311 16 3 493 5 490 7.30e-66 221
MS.gene39834.t1 MTR_0009s0240 33.833 467 270 15 1 458 1 437 1.76e-65 219
MS.gene39834.t1 MTR_7g071040 28.884 502 324 10 2 490 12 493 3.49e-65 219
MS.gene39834.t1 MTR_4g485620 31.646 474 291 15 19 483 1 450 3.95e-65 218
MS.gene39834.t1 MTR_7g070610 29.577 497 317 10 7 490 13 489 8.63e-65 218
MS.gene39834.t1 MTR_7g070910 29.921 508 311 13 2 490 6 487 1.06e-64 218
MS.gene39834.t1 MTR_0536s0010 29.880 502 299 15 3 490 17 479 1.09e-64 217
MS.gene39834.t1 MTR_7g102490 30.333 511 308 16 3 492 5 488 1.18e-64 218
MS.gene39834.t1 MTR_7g070940 29.225 503 298 13 4 487 6 469 1.42e-64 217
MS.gene39834.t1 MTR_7g102450 31.800 500 292 13 6 492 10 473 4.09e-64 216
MS.gene39834.t1 MTR_4g031800 29.921 508 302 12 3 491 4 476 4.71e-64 216
MS.gene39834.t1 MTR_2g034990 30.906 508 300 14 2 488 6 483 2.35e-63 214
MS.gene39834.t1 MTR_6g035185 30.461 499 295 14 12 488 16 484 5.40e-62 210
MS.gene39834.t1 MTR_4g118000 28.921 491 296 13 12 488 17 468 1.01e-60 206
MS.gene39834.t1 MTR_4g117950 29.920 498 298 15 3 486 2 462 1.02e-60 206
MS.gene39834.t1 MTR_2g059240 32.780 482 288 12 6 483 12 461 1.47e-60 206
MS.gene39834.t1 MTR_8g071070 31.434 509 295 16 1 493 1 471 6.37e-60 204
MS.gene39834.t1 MTR_7g102520 31.089 505 301 17 7 491 12 489 2.56e-59 204
MS.gene39834.t1 MTR_8g074550 30.483 538 269 18 4 490 5 488 2.93e-59 204
MS.gene39834.t1 MTR_7g070860 28.884 502 308 12 1 490 1 465 6.81e-59 202
MS.gene39834.t1 MTR_7g070870 30.101 495 291 13 1 486 10 458 6.87e-59 201
MS.gene39834.t1 MTR_2g035020 29.586 507 310 13 2 489 6 484 2.28e-58 201
MS.gene39834.t1 MTR_3g009510 30.392 510 287 18 8 489 6 475 3.78e-58 200
MS.gene39834.t1 MTR_5g027210 27.395 522 299 12 8 492 5 483 6.33e-58 199
MS.gene39834.t1 MTR_5g464760 31.189 513 289 20 3 491 8 480 1.35e-57 198
MS.gene39834.t1 MTR_7g070930 28.773 497 321 11 7 490 14 490 2.39e-57 198
MS.gene39834.t1 MTR_8g466240 29.532 491 294 13 7 490 8 453 2.54e-57 197
MS.gene39834.t1 MTR_8g032950 28.770 504 316 12 2 489 7 483 6.79e-57 197
MS.gene39834.t1 MTR_5g039900 29.140 477 307 9 8 473 14 470 1.38e-56 196
MS.gene39834.t1 MTR_7g012120 29.681 502 307 14 2 486 11 483 4.59e-56 194
MS.gene39834.t1 MTR_8g009055 31.164 507 274 18 3 483 2 459 5.86e-56 194
MS.gene39834.t1 MTR_6g035295 28.745 494 315 11 8 486 13 484 6.01e-56 194
MS.gene39834.t1 MTR_6g033625 30.709 508 281 15 5 488 2 462 7.05e-56 193
MS.gene39834.t1 MTR_5g040030 28.125 480 319 11 4 473 11 474 1.73e-55 193
MS.gene39834.t1 MTR_5g016660 28.458 506 324 13 3 493 4 486 1.84e-55 193
MS.gene39834.t1 MTR_6g038220 30.200 500 293 19 2 492 3 455 3.75e-55 191
MS.gene39834.t1 MTR_3g479520 29.126 515 299 17 3 492 11 484 9.24e-55 191
MS.gene39834.t1 MTR_8g044140 29.741 464 294 10 38 490 6 448 3.31e-54 189
MS.gene39834.t1 MTR_6g033615 31.313 495 281 13 5 488 2 448 5.48e-54 188
MS.gene39834.t1 MTR_4g008630 31.365 491 290 15 8 492 15 464 7.98e-54 188
MS.gene39834.t1 MTR_2g008210 31.102 508 292 19 4 491 8 477 2.08e-53 187
MS.gene39834.t1 MTR_0036s0220 28.317 505 306 17 6 491 11 478 2.67e-53 187
MS.gene39834.t1 MTR_4g485640 29.583 480 278 12 17 479 219 655 3.69e-53 190
MS.gene39834.t1 MTR_5g029800 28.486 502 304 14 8 488 12 479 4.70e-53 186
MS.gene39834.t1 MTR_5g464810 30.099 505 295 18 7 491 12 478 6.22e-53 186
MS.gene39834.t1 MTR_5g064240 30.099 505 295 18 7 491 12 478 6.22e-53 186
MS.gene39834.t1 MTR_5g019580 32.596 497 259 18 1 462 1 456 2.57e-52 184
MS.gene39834.t1 MTR_5g035560 29.175 497 287 18 7 492 11 453 2.65e-52 184
MS.gene39834.t1 MTR_2g035040 32.468 385 226 11 127 493 24 392 3.63e-52 182
MS.gene39834.t1 MTR_1g029540 29.328 491 289 16 12 492 19 461 4.15e-52 183
MS.gene39834.t1 MTR_7g071050 28.903 474 265 14 7 471 13 423 4.36e-52 182
MS.gene39834.t1 MTR_8g008990 30.785 497 291 16 3 483 2 461 6.35e-52 183
MS.gene39834.t1 MTR_8g006710 30.957 491 283 15 4 476 3 455 1.29e-51 182
MS.gene39834.t1 MTR_5g035580 29.518 498 274 20 7 487 13 450 1.56e-51 182
MS.gene39834.t1 MTR_4g094220 29.412 493 292 18 1 469 1 461 2.11e-51 182
MS.gene39834.t1 MTR_0184s0040 29.779 497 291 15 4 483 18 473 3.75e-51 181
MS.gene39834.t1 MTR_0078s0190 29.779 497 291 15 4 483 18 473 3.75e-51 181
MS.gene39834.t1 MTR_3g079480 29.237 472 288 15 4 458 18 460 6.75e-51 181
MS.gene39834.t1 MTR_6g488280 30.339 501 284 20 3 483 2 457 8.64e-51 180
MS.gene39834.t1 MTR_0428s0010 30.339 501 284 20 3 483 2 457 8.64e-51 180
MS.gene39834.t1 MTR_6g033675 30.658 486 274 21 5 468 2 446 9.69e-51 180
MS.gene39834.t1 MTR_5g067170 28.629 496 305 14 12 488 16 481 9.72e-51 180
MS.gene39834.t1 MTR_6g038240 28.169 497 295 19 6 491 10 455 1.11e-50 179
MS.gene39834.t1 MTR_8g465670 30.452 509 290 17 1 487 1 467 1.15e-50 180
MS.gene39834.t1 MTR_7g046490 30.375 507 283 14 3 487 2 460 1.91e-50 179
MS.gene39834.t1 MTR_5g019580 30.992 484 256 16 1 462 53 480 1.92e-50 180
MS.gene39834.t1 MTR_6g038200 29.209 493 295 19 7 492 11 456 2.18e-50 178
MS.gene39834.t1 MTR_6g014270 26.692 517 315 18 1 491 1 479 2.31e-50 179
MS.gene39834.t1 MTR_6g023665 30.539 501 283 19 3 483 9 464 4.24e-50 178
MS.gene39834.t1 MTR_6g033660 29.899 495 292 14 8 488 5 458 1.01e-49 177
MS.gene39834.t1 MTR_6g038230 29.412 493 294 19 7 492 11 456 1.01e-49 177
MS.gene39834.t1 MTR_0078s0060 30.101 495 292 16 4 483 3 458 1.23e-49 177
MS.gene39834.t1 MTR_6g033725 30.328 488 270 19 5 468 2 443 1.38e-49 177
MS.gene39834.t1 MTR_6g013440 26.901 513 311 19 4 491 8 481 1.59e-49 177
MS.gene39834.t1 MTR_8g009050 29.283 502 296 16 3 486 2 462 3.64e-49 176
MS.gene39834.t1 MTR_8g090095 28.157 483 304 13 12 487 30 476 6.52e-49 175
MS.gene39834.t1 MTR_0078s0010 30.584 497 288 17 4 483 3 459 7.30e-49 175
MS.gene39834.t1 MTR_1g040310 28.189 486 315 12 9 483 17 479 8.10e-49 175
MS.gene39834.t1 MTR_8g006730 29.435 496 295 16 4 483 3 459 4.06e-48 172
MS.gene39834.t1 MTR_3g479490 28.265 513 306 20 3 492 2 475 1.23e-47 171
MS.gene39834.t1 MTR_6g014187 27.651 481 294 20 3 461 6 454 1.48e-47 171
MS.gene39834.t1 MTR_6g014290 26.408 515 315 20 1 491 4 478 3.73e-47 170
MS.gene39834.t1 MTR_6g014200 27.510 498 301 19 1 473 1 463 6.32e-47 169
MS.gene39834.t1 MTR_6g014020 26.367 512 321 20 1 491 4 480 7.21e-47 169
MS.gene39834.t1 MTR_6g014250 26.641 518 310 21 1 491 4 478 7.54e-47 169
MS.gene39834.t1 MTR_1g019510 28.942 501 296 16 3 486 2 459 8.45e-47 169
MS.gene39834.t1 MTR_8g006220 28.681 523 286 17 3 487 2 475 1.59e-46 169
MS.gene39834.t1 MTR_3g479470 29.586 507 297 20 4 490 10 476 1.66e-46 169
MS.gene39834.t1 MTR_8g059425 25.631 515 319 19 1 491 4 478 1.66e-46 169
MS.gene39834.t1 MTR_6g014040 26.275 510 323 18 2 491 5 481 2.35e-46 168
MS.gene39834.t1 MTR_0184s0030 38.007 271 143 8 224 486 210 463 3.39e-46 167
MS.gene39834.t1 MTR_6g014150 26.316 513 320 19 1 491 1 477 3.65e-46 167
MS.gene39834.t1 MTR_7g470610 33.866 313 170 6 136 437 5 291 6.48e-46 162
MS.gene39834.t1 MTR_7g070583 33.866 313 170 6 136 437 5 291 6.48e-46 162
MS.gene39834.t1 MTR_8g027870 28.858 499 290 17 3 483 14 465 1.33e-45 166
MS.gene39834.t1 MTR_6g014220 26.614 511 319 19 1 491 4 478 1.48e-45 166
MS.gene39834.t1 MTR_8g009073 29.703 505 269 19 3 472 2 455 1.50e-45 166
MS.gene39834.t1 MTR_7g117170 29.862 509 274 21 1 479 9 464 1.66e-45 166
MS.gene39834.t1 MTR_6g013960 27.485 513 314 22 1 491 4 480 1.74e-45 166
MS.gene39834.t1 MTR_8g009067 29.730 481 276 13 3 459 2 444 1.79e-45 166
MS.gene39834.t1 MTR_5g090620 27.220 518 306 18 4 490 2 479 1.95e-45 166
MS.gene39834.t1 MTR_7g080900 28.740 508 292 20 1 493 6 458 2.60e-45 165
MS.gene39834.t1 MTR_3g008010 26.367 512 319 21 1 491 4 478 2.63e-45 165
MS.gene39834.t1 MTR_7g047030 39.919 248 127 8 254 493 236 469 3.47e-45 165
MS.gene39834.t1 MTR_7g047270 39.919 248 127 8 254 493 236 469 3.47e-45 165
MS.gene39834.t1 MTR_7g067120 27.721 487 285 13 4 490 6 425 3.58e-45 164
MS.gene39834.t1 MTR_4g064987 29.116 498 287 18 5 493 6 446 3.61e-45 164
MS.gene39834.t1 MTR_8g027885 28.600 500 290 16 3 483 14 465 5.34e-45 164
MS.gene39834.t1 MTR_6g014050 27.733 494 306 19 1 473 4 467 6.57e-45 164
MS.gene39834.t1 MTR_8g006270 28.544 515 282 17 3 487 2 460 7.91e-45 164
MS.gene39834.t1 MTR_5g072830 29.225 503 273 18 7 490 10 448 1.86e-44 162
MS.gene39834.t1 MTR_6g013990 26.667 510 316 17 3 491 6 478 2.21e-44 163
MS.gene39834.t1 MTR_5g072810 27.888 502 284 16 7 490 12 453 2.86e-44 162
MS.gene39834.t1 MTR_4g064987 29.026 503 287 18 5 493 6 452 2.98e-44 162
MS.gene39834.t1 MTR_0288s0020 25.586 512 306 18 1 491 4 461 3.61e-44 162
MS.gene39834.t1 MTR_7g011470 27.416 507 308 19 1 491 4 466 3.79e-44 162
MS.gene39834.t1 MTR_1g107380 28.713 505 306 20 3 491 7 473 6.30e-44 161
MS.gene39834.t1 MTR_7g011470 27.866 506 303 21 1 491 4 462 7.48e-44 161
MS.gene39834.t1 MTR_6g011340 27.416 507 322 17 1 491 4 480 1.33e-43 160
MS.gene39834.t1 MTR_8g008970 29.637 496 281 14 3 472 2 455 2.59e-43 164
MS.gene39834.t1 MTR_8g008970 33.198 247 136 7 249 492 573 793 1.62e-31 129
MS.gene39834.t1 MTR_6g013450 26.641 518 313 21 1 491 4 481 3.50e-43 159
MS.gene39834.t1 MTR_8g009067 38.000 250 129 5 224 459 89 326 3.66e-43 156
MS.gene39834.t1 MTR_6g014310 27.255 510 311 19 5 491 9 481 4.51e-43 159
MS.gene39834.t1 MTR_6g005600 27.273 506 280 15 3 473 2 454 6.10e-43 159
MS.gene39834.t1 MTR_8g009063 28.543 508 292 18 3 486 9 469 6.23e-43 159
MS.gene39834.t1 MTR_5g072840 28.317 505 277 20 7 491 10 449 6.25e-43 158
MS.gene39834.t1 MTR_3g084530 27.525 505 307 16 7 490 6 472 7.26e-43 158
MS.gene39834.t1 MTR_8g068360 29.935 461 273 15 3 449 8 432 8.52e-43 158
MS.gene39834.t1 MTR_8g009073 38.136 236 120 6 249 472 105 326 1.22e-42 154
MS.gene39834.t1 MTR_7g067330 27.479 484 284 13 4 487 6 422 1.27e-42 157
MS.gene39834.t1 MTR_8g012745 30.444 450 241 17 69 486 55 464 1.79e-42 157
MS.gene39834.t1 MTR_1g107350 26.923 494 328 14 2 490 3 468 2.13e-42 157
MS.gene39834.t1 MTR_8g083290 29.225 503 294 21 6 487 2 463 2.16e-42 157
MS.gene39834.t1 MTR_8g012650 36.271 295 148 9 210 486 195 467 2.66e-42 157
MS.gene39834.t1 MTR_5g016480 29.435 496 293 22 15 492 16 472 3.13e-42 157
MS.gene39834.t1 MTR_8g012635 29.783 460 256 18 47 486 55 467 4.23e-42 156
MS.gene39834.t1 MTR_7g080935 26.854 499 303 18 5 493 9 455 4.25e-42 156
MS.gene39834.t1 MTR_5g090700 26.285 506 293 17 4 473 2 463 6.78e-42 156
MS.gene39834.t1 MTR_8g068330 30.128 468 286 15 3 461 4 439 7.23e-42 155
MS.gene39834.t1 MTR_5g070040 28.402 507 299 21 3 491 7 467 7.82e-42 155
MS.gene39834.t1 MTR_1g019520 40.654 214 113 4 280 486 2 208 7.83e-42 149
MS.gene39834.t1 MTR_5g072820 28.373 504 276 17 7 490 10 448 1.01e-41 155
MS.gene39834.t1 MTR_6g013900 26.306 517 314 22 1 491 4 479 1.51e-41 155
MS.gene39834.t1 MTR_7g080950 25.099 506 307 12 3 493 2 450 1.67e-41 154
MS.gene39834.t1 MTR_8g077590 29.537 518 277 21 1 486 1 462 1.68e-41 154
MS.gene39834.t1 MTR_6g014170 26.326 509 307 20 1 491 4 462 1.72e-41 154
MS.gene39834.t1 MTR_6g013920 26.758 512 318 22 1 491 4 479 1.91e-41 155
MS.gene39834.t1 MTR_8g068340 30.022 463 273 15 3 450 8 434 2.05e-41 154
MS.gene39834.t1 MTR_8g012630 39.908 218 110 5 281 486 203 411 4.73e-41 152
MS.gene39834.t1 MTR_7g013200 25.761 493 297 16 6 488 4 437 4.76e-41 153
MS.gene39834.t1 MTR_5g066410 28.157 483 303 14 10 488 1 443 7.18e-41 152
MS.gene39834.t1 MTR_8g007565 29.274 468 294 17 1 460 1 439 1.20e-40 152
MS.gene39834.t1 MTR_6g038300 27.711 498 295 22 6 490 10 455 1.65e-40 152
MS.gene39834.t1 MTR_3g069710 28.252 492 297 16 8 493 13 454 1.75e-40 152
MS.gene39834.t1 MTR_5g090660 27.096 513 298 20 4 484 2 470 2.06e-40 153
MS.gene39834.t1 MTR_5g090580 26.969 508 307 15 4 484 2 472 2.69e-40 151
MS.gene39834.t1 MTR_8g007650 29.274 468 294 17 1 460 1 439 3.04e-40 151
MS.gene39834.t1 MTR_3g031450 25.198 504 291 19 7 492 18 453 3.33e-40 151
MS.gene39834.t1 MTR_7g080940 26.854 499 303 18 5 493 9 455 6.43e-40 150
MS.gene39834.t1 MTR_4g128690 28.854 506 272 20 7 493 15 451 1.19e-39 149
MS.gene39834.t1 MTR_3g084520 25.781 512 316 13 7 493 6 478 3.12e-39 149
MS.gene39834.t1 MTR_7g013180 26.569 478 296 15 6 474 4 435 3.22e-39 148
MS.gene39834.t1 MTR_2g046750 29.167 480 289 21 9 473 9 452 3.54e-39 148
MS.gene39834.t1 MTR_5g098930 25.626 519 298 21 4 487 2 467 5.30e-39 148
MS.gene39834.t1 MTR_8g006260 34.892 278 149 9 221 483 207 467 5.40e-39 148
MS.gene39834.t1 MTR_3g031400 24.254 503 295 18 7 492 18 451 7.52e-39 147
MS.gene39834.t1 MTR_1g032490 27.054 499 317 16 7 493 10 473 9.15e-39 147
MS.gene39834.t1 MTR_3g084540 26.653 499 314 15 7 485 6 472 1.56e-38 147
MS.gene39834.t1 MTR_2g046820 28.000 475 284 19 17 473 15 449 1.84e-38 146
MS.gene39834.t1 MTR_1g107315 27.327 505 312 17 2 490 3 468 3.07e-38 146
MS.gene39834.t1 MTR_5g058320 25.591 508 315 20 1 491 4 465 3.97e-38 145
MS.gene39834.t1 MTR_8g012730 37.838 222 110 5 284 493 99 304 4.11e-38 142
MS.gene39834.t1 MTR_7g013240 27.347 490 290 20 6 487 5 436 5.98e-38 144
MS.gene39834.t1 MTR_4g128720 27.400 500 294 18 4 490 12 455 1.09e-37 144
MS.gene39834.t1 MTR_5g090670 26.096 502 321 16 4 484 2 474 1.19e-37 144
MS.gene39834.t1 MTR_2g040530 27.789 475 287 19 17 473 15 451 2.02e-37 143
MS.gene39834.t1 MTR_7g013220 26.243 503 293 20 6 488 4 448 2.05e-37 143
MS.gene39834.t1 MTR_8g088560 27.721 487 310 14 7 490 10 457 2.94e-37 142
MS.gene39834.t1 MTR_6g014190 28.947 304 194 8 190 491 4 287 7.20e-37 137
MS.gene39834.t1 MTR_5g090610 26.285 506 306 20 4 488 2 461 1.65e-36 140
MS.gene39834.t1 MTR_3g009490 42.487 193 94 8 307 489 2 187 2.22e-36 133
MS.gene39834.t1 MTR_7g013260 24.848 495 297 19 6 487 5 437 6.38e-36 139
MS.gene39834.t1 MTR_6g042310 27.004 474 294 18 4 464 15 449 8.91e-36 139
MS.gene39834.t1 MTR_5g070090 27.451 510 285 21 4 485 8 460 1.13e-35 138
MS.gene39834.t1 MTR_5g031830 28.963 511 286 24 6 490 11 470 1.86e-35 138
MS.gene39834.t1 MTR_5g031840 27.079 517 286 21 6 490 4 461 2.53e-35 137
MS.gene39834.t1 MTR_8g056740 30.667 300 157 7 123 422 51 299 2.62e-35 136
MS.gene39834.t1 MTR_1g107375 25.941 505 304 15 2 490 3 453 2.79e-35 137
MS.gene39834.t1 MTR_2g046620 26.696 457 276 17 7 449 16 427 3.18e-35 137
MS.gene39834.t1 MTR_7g039550 30.888 259 165 3 242 492 15 267 3.88e-35 132
MS.gene39834.t1 MTR_4g082820 30.345 435 240 18 1 414 1 393 4.31e-35 137
MS.gene39834.t1 MTR_1g107285 25.646 503 306 18 8 490 9 463 6.05e-35 136
MS.gene39834.t1 MTR_5g090630 26.523 509 299 16 4 484 2 463 6.27e-35 136
MS.gene39834.t1 MTR_5g031860 29.109 505 292 23 6 490 11 469 7.55e-35 136
MS.gene39834.t1 MTR_3g049970 26.600 500 322 19 2 490 4 469 9.02e-35 136
MS.gene39834.t1 MTR_6g014300 25.532 517 297 23 4 491 9 466 1.16e-34 135
MS.gene39834.t1 MTR_4g095008 26.923 494 313 18 7 491 11 465 1.33e-34 136
MS.gene39834.t1 MTR_2g008220 27.093 454 293 13 2 449 9 430 1.35e-34 135
MS.gene39834.t1 MTR_8g083280 27.202 511 305 20 1 492 1 463 1.66e-34 135
MS.gene39834.t1 MTR_0891s0010 31.655 278 161 8 192 460 6 263 1.83e-34 131
MS.gene39834.t1 MTR_3g479610 30.435 322 198 11 175 492 15 314 3.27e-34 131
MS.gene39834.t1 MTR_3g069690 25.103 486 307 16 4 480 5 442 3.51e-34 134
MS.gene39834.t1 MTR_5g072860 25.595 504 303 17 7 492 18 467 6.92e-34 133
MS.gene39834.t1 MTR_4g079270 26.775 493 312 13 7 493 8 457 1.18e-33 132
MS.gene39834.t1 MTR_4g094920 34.426 244 151 4 248 491 246 480 1.76e-33 133
MS.gene39834.t1 MTR_2g008225 25.447 503 315 18 2 492 10 464 3.14e-33 132
MS.gene39834.t1 MTR_8g007585 33.019 212 125 5 280 491 198 392 3.17e-33 130
MS.gene39834.t1 MTR_4g123553 27.111 450 283 15 7 449 15 426 3.88e-33 131
MS.gene39834.t1 MTR_1g090270 25.591 465 287 16 7 456 15 435 5.67e-33 130
MS.gene39834.t1 MTR_8g064870 27.723 505 300 22 8 490 12 473 1.74e-32 129
MS.gene39834.t1 MTR_1g107365 25.651 499 304 17 7 490 45 491 2.02e-32 130
MS.gene39834.t1 MTR_8g043470 24.221 417 227 12 69 467 13 358 4.30e-32 127
MS.gene39834.t1 MTR_4g079250 27.200 500 314 15 1 493 1 457 4.56e-32 128
MS.gene39834.t1 MTR_1g107360 27.344 384 231 13 121 490 112 461 6.71e-32 128
MS.gene39834.t1 MTR_6g014240 32.287 223 134 6 249 469 222 429 7.01e-32 127
MS.gene39834.t1 MTR_5g075440 24.104 502 313 14 7 493 10 458 1.57e-31 126
MS.gene39834.t1 MTR_8g064880 27.371 464 277 19 2 441 4 431 2.05e-31 127
MS.gene39834.t1 MTR_5g090600 25.249 503 301 17 4 484 2 451 2.14e-31 126
MS.gene39834.t1 MTR_4g082810 28.904 429 256 13 1 414 1 395 3.41e-31 125
MS.gene39834.t1 MTR_2g008226 25.773 485 292 20 3 462 5 446 8.36e-31 124
MS.gene39834.t1 MTR_2g083430 26.033 484 291 18 7 471 8 443 9.87e-31 124
MS.gene39834.t1 MTR_6g036650 26.201 458 292 15 3 449 14 436 1.08e-30 124
MS.gene39834.t1 MTR_8g009840 37.019 208 107 5 299 492 333 530 3.97e-30 123
MS.gene39834.t1 MTR_3g435310 25.169 445 254 14 7 449 18 385 4.04e-30 122
MS.gene39834.t1 MTR_7g070760 31.944 216 116 1 209 424 17 201 4.07e-30 117
MS.gene39834.t1 MTR_0477s0010 31.944 216 122 6 280 491 123 317 5.57e-30 119
MS.gene39834.t1 MTR_2g083480 27.115 461 283 17 7 455 8 427 8.43e-29 119
MS.gene39834.t1 MTR_2g014900 26.915 457 285 15 7 454 7 423 2.71e-28 117
MS.gene39834.t1 MTR_0536s0030 35.185 162 92 2 338 490 194 351 7.73e-28 114
MS.gene39834.t1 MTR_0536s0030 25.500 200 122 6 38 236 9 182 3.96e-11 65.1
MS.gene39834.t1 MTR_4g077960 25.959 443 277 16 17 449 2 403 9.55e-28 115
MS.gene39834.t1 MTR_2g083420 25.941 478 275 20 7 471 8 419 3.58e-27 114
MS.gene39834.t1 MTR_2g083380 26.539 471 285 19 7 461 25 450 2.57e-26 112
MS.gene39834.t1 MTR_5g004940 33.019 212 114 7 279 490 194 377 1.56e-25 108
MS.gene39834.t1 MTR_6g014186 24.675 385 236 13 1 360 1 356 2.14e-25 108
MS.gene39834.t1 MTR_5g098960 39.877 163 86 4 281 442 259 410 2.92e-25 108
MS.gene39834.t1 MTR_2g083390 25.000 488 267 20 7 471 8 419 2.97e-25 108
MS.gene39834.t1 MTR_2g083490 26.271 472 285 19 7 461 8 433 6.98e-25 107
MS.gene39834.t1 MTR_2086s0010 34.337 166 97 5 304 469 1 154 6.39e-24 99.0
MS.gene39834.t1 MTR_1996s0010 34.337 166 97 5 304 469 1 154 6.39e-24 99.0
MS.gene39834.t1 MTR_7g070995 33.784 148 88 2 352 490 1 147 1.27e-23 97.4
MS.gene39834.t1 MTR_5g072850 31.429 210 109 5 216 416 144 327 1.75e-23 102
MS.gene39834.t1 MTR_4g059370 29.644 253 149 8 226 472 145 374 2.82e-22 99.0
MS.gene39834.t1 MTR_6g014160 25.581 301 162 13 124 407 102 357 2.90e-22 99.0
MS.gene39834.t1 MTR_6g014185 26.592 267 146 9 228 493 130 347 9.05e-22 97.1
MS.gene39834.t1 MTR_4g117970 24.752 404 251 14 82 462 48 421 9.84e-22 97.8
MS.gene39834.t1 MTR_7g080960 27.347 245 109 7 252 493 295 473 7.68e-21 95.5
MS.gene39834.t1 MTR_5g066390 31.792 173 101 5 319 491 60 215 2.06e-20 90.1
MS.gene39834.t1 MTR_6g078320 28.253 269 169 8 221 476 221 478 2.49e-20 94.0
MS.gene39834.t1 MTR_6g013680 22.444 401 219 13 109 491 49 375 5.35e-20 92.0
MS.gene39834.t1 MTR_6g014000 34.307 137 80 4 355 491 30 156 1.47e-19 91.7
MS.gene39834.t1 MTR_1g107325 33.094 139 86 3 354 490 219 352 1.08e-16 82.0
MS.gene39834.t1 MTR_5g090690 28.230 209 114 7 249 449 166 346 6.66e-16 79.7
MS.gene39834.t1 MTR_3g479620 31.288 163 97 5 3 163 2 151 1.21e-15 75.1
MS.gene39834.t1 MTR_1g090280 29.487 156 104 4 304 456 133 285 1.50e-14 75.1
MS.gene39834.t1 MTR_6g013435 30.464 151 98 5 181 329 61 206 6.09e-12 67.0
MS.gene39834.t1 MTR_2g098425 33.824 136 73 5 9 135 14 141 2.38e-11 63.5
MS.gene39834.t1 MTR_0475s0030 33.333 72 44 1 376 447 13 80 5.57e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39834.t1 AT5G12890 42.857 497 255 7 1 487 1 478 1.93e-137 405
MS.gene39834.t1 AT2G36780 34.064 502 292 15 7 493 14 491 3.62e-83 266
MS.gene39834.t1 AT2G36770 33.333 501 295 14 7 492 14 490 9.13e-82 262
MS.gene39834.t1 AT2G36800 33.730 504 292 14 7 493 12 490 1.33e-79 256
MS.gene39834.t1 AT2G36750 34.195 503 289 14 7 493 10 486 4.79e-79 255
MS.gene39834.t1 AT2G15490 32.803 503 299 15 1 490 1 477 5.21e-77 249
MS.gene39834.t1 AT2G15490 32.604 503 303 15 1 490 1 480 1.74e-76 248
MS.gene39834.t1 AT4G34131 33.133 498 291 14 4 487 7 476 3.24e-76 247
MS.gene39834.t1 AT2G36790 33.929 504 290 15 7 493 13 490 2.48e-75 246
MS.gene39834.t1 AT4G34135 33.042 457 268 11 4 445 8 441 3.03e-75 245
MS.gene39834.t1 AT2G15480 33.199 497 293 15 7 490 10 480 4.14e-75 244
MS.gene39834.t1 AT2G15480 32.806 506 293 15 7 490 10 490 4.23e-75 245
MS.gene39834.t1 AT2G36760 32.669 502 297 18 7 490 14 492 2.37e-74 243
MS.gene39834.t1 AT1G73880 30.584 497 298 16 5 493 12 469 9.80e-74 241
MS.gene39834.t1 AT4G34138 31.774 513 288 17 5 492 9 484 4.57e-72 237
MS.gene39834.t1 AT3G53160 31.873 502 301 18 7 492 8 484 9.75e-71 233
MS.gene39834.t1 AT3G53150 31.445 512 309 15 4 492 19 511 2.41e-69 230
MS.gene39834.t1 AT2G16890 31.263 499 292 14 7 492 9 469 8.79e-63 212
MS.gene39834.t1 AT5G03490 30.533 488 293 13 4 488 16 460 8.47e-61 206
MS.gene39834.t1 AT1G10400 29.779 497 301 13 1 487 1 459 1.39e-60 206
MS.gene39834.t1 AT2G16890 32.432 444 253 12 7 437 9 418 1.64e-59 202
MS.gene39834.t1 AT1G22380 30.608 477 280 16 3 460 9 453 2.23e-59 203
MS.gene39834.t1 AT1G22400 30.648 509 296 17 4 491 10 482 7.31e-59 202
MS.gene39834.t1 AT1G22360 30.632 506 299 16 4 491 7 478 3.18e-58 200
MS.gene39834.t1 AT1G22340 29.608 510 300 15 4 491 10 482 1.32e-57 199
MS.gene39834.t1 AT1G51210 29.718 461 276 14 5 462 18 433 1.37e-57 197
MS.gene39834.t1 AT5G14860 28.906 512 296 17 7 492 8 477 7.98e-57 196
MS.gene39834.t1 AT1G22360 29.842 506 291 16 4 491 7 466 1.21e-53 187
MS.gene39834.t1 AT1G05680 28.921 491 292 17 7 487 6 449 3.76e-53 186
MS.gene39834.t1 AT4G01070 29.767 514 269 17 4 483 5 460 7.75e-52 183
MS.gene39834.t1 AT1G22370 29.412 476 298 13 4 469 10 457 7.55e-51 180
MS.gene39834.t1 AT5G66690 29.814 483 266 19 5 461 5 440 6.01e-50 178
MS.gene39834.t1 AT1G05675 28.395 486 301 15 7 487 6 449 8.04e-50 177
MS.gene39834.t1 AT1G06000 28.947 494 271 19 4 487 7 430 2.43e-49 175
MS.gene39834.t1 AT2G36970 27.146 501 290 16 4 476 7 460 3.72e-49 176
MS.gene39834.t1 AT1G01420 27.745 501 295 16 6 485 7 461 5.40e-49 175
MS.gene39834.t1 AT1G01420 27.745 501 295 16 6 485 10 464 5.49e-49 175
MS.gene39834.t1 AT2G31790 27.992 493 302 14 4 487 5 453 1.02e-48 174
MS.gene39834.t1 AT3G50740 29.980 497 262 20 1 461 1 447 1.25e-48 174
MS.gene39834.t1 AT2G18560 39.068 279 138 9 215 478 107 368 1.57e-48 171
MS.gene39834.t1 AT5G26310 30.083 482 266 18 5 461 5 440 2.15e-48 174
MS.gene39834.t1 AT2G31750 28.884 502 301 20 1 492 1 456 8.54e-48 171
MS.gene39834.t1 AT5G65550 30.043 466 272 18 1 450 1 428 2.29e-47 171
MS.gene39834.t1 AT2G31750 28.884 502 301 20 1 492 1 456 2.48e-47 171
MS.gene39834.t1 AT4G36770 27.495 491 274 16 8 468 7 445 4.58e-47 169
MS.gene39834.t1 AT1G01390 29.835 486 272 16 1 461 1 442 5.78e-47 170
MS.gene39834.t1 AT1G01390 29.835 486 272 16 1 461 18 459 1.21e-46 169
MS.gene39834.t1 AT5G59580 28.144 501 285 19 5 490 7 447 2.41e-46 167
MS.gene39834.t1 AT2G29730 28.008 507 305 18 4 493 2 465 6.91e-46 167
MS.gene39834.t1 AT1G78270 28.178 472 300 13 2 460 8 453 8.24e-46 167
MS.gene39834.t1 AT2G18570 37.546 269 141 7 222 478 205 458 2.86e-45 165
MS.gene39834.t1 AT5G59590 28.628 503 283 23 4 490 7 449 3.63e-45 164
MS.gene39834.t1 AT5G49690 29.638 469 264 18 7 459 10 428 7.82e-45 164
MS.gene39834.t1 AT5G38040 27.236 492 282 17 15 490 18 449 9.17e-45 163
MS.gene39834.t1 AT3G46690 28.313 498 288 15 4 488 6 447 9.52e-45 163
MS.gene39834.t1 AT1G07250 28.684 509 288 23 4 481 3 467 1.17e-44 163
MS.gene39834.t1 AT3G46680 29.209 493 290 20 3 487 5 446 1.22e-44 163
MS.gene39834.t1 AT3G46660 29.102 512 279 22 3 490 7 458 6.64e-44 161
MS.gene39834.t1 AT3G46670 28.240 517 266 22 3 487 2 445 1.93e-43 159
MS.gene39834.t1 AT2G29710 28.458 506 300 21 4 491 2 463 3.30e-43 159
MS.gene39834.t1 AT1G24100 30.233 516 276 21 1 490 1 458 7.17e-43 158
MS.gene39834.t1 AT1G07260 29.666 509 286 20 8 487 7 472 8.48e-43 158
MS.gene39834.t1 AT2G43820 27.309 498 302 17 1 490 1 446 8.81e-43 158
MS.gene39834.t1 AT2G30140 27.823 496 288 17 7 490 13 450 1.52e-42 157
MS.gene39834.t1 AT2G30140 27.745 501 283 18 7 490 13 451 2.84e-42 156
MS.gene39834.t1 AT2G30150 26.285 506 291 15 7 493 13 455 1.01e-41 155
MS.gene39834.t1 AT1G05530 27.163 497 308 20 5 491 3 455 1.84e-41 154
MS.gene39834.t1 AT3G16520 33.333 246 150 5 221 463 208 442 2.68e-41 154
MS.gene39834.t1 AT3G16520 33.333 246 150 5 221 463 208 442 2.71e-41 154
MS.gene39834.t1 AT3G16520 33.333 246 150 5 221 463 208 442 3.38e-41 154
MS.gene39834.t1 AT4G34135 30.321 343 215 7 4 337 8 335 4.74e-41 150
MS.gene39834.t1 AT3G11340 26.969 508 285 20 3 491 5 445 7.73e-41 152
MS.gene39834.t1 AT2G43840 27.680 513 281 19 1 490 1 446 9.79e-41 152
MS.gene39834.t1 AT2G43840 27.680 513 281 19 1 490 1 446 1.11e-40 152
MS.gene39834.t1 AT5G38010 27.723 505 291 19 3 490 6 453 1.88e-40 151
MS.gene39834.t1 AT2G29740 27.505 509 304 19 3 487 4 471 2.27e-40 152
MS.gene39834.t1 AT3G46700 27.495 491 296 16 4 488 6 442 2.51e-40 151
MS.gene39834.t1 AT2G28080 26.726 449 277 16 12 445 23 434 2.88e-40 151
MS.gene39834.t1 AT3G21790 26.163 516 322 16 5 493 2 485 3.00e-40 152
MS.gene39834.t1 AT1G05560 26.477 491 312 16 6 490 4 451 3.68e-40 151
MS.gene39834.t1 AT2G30150 26.148 501 288 15 12 493 2 439 6.94e-40 149
MS.gene39834.t1 AT1G05560 26.477 491 312 16 6 490 54 501 1.04e-39 150
MS.gene39834.t1 AT2G29750 26.602 515 310 18 3 492 4 475 5.35e-39 148
MS.gene39834.t1 AT3G55700 27.202 511 296 16 1 493 1 453 8.57e-39 147
MS.gene39834.t1 AT5G05860 25.838 507 301 20 1 491 1 448 2.30e-38 145
MS.gene39834.t1 AT3G46720 29.259 499 280 20 2 490 5 440 2.93e-38 145
MS.gene39834.t1 AT4G15260 31.104 299 174 9 207 490 77 358 7.41e-38 142
MS.gene39834.t1 AT5G54010 29.209 493 296 19 5 490 4 450 8.76e-38 144
MS.gene39834.t1 AT1G07240 34.286 280 155 9 221 491 217 476 1.11e-37 144
MS.gene39834.t1 AT3G02100 25.581 473 294 12 5 463 11 439 1.75e-37 143
MS.gene39834.t1 AT4G15280 25.775 516 313 19 5 492 2 475 3.64e-37 143
MS.gene39834.t1 AT4G15280 25.775 516 313 19 5 492 34 507 4.11e-37 143
MS.gene39834.t1 AT3G55710 27.821 514 289 16 1 491 1 455 8.31e-37 141
MS.gene39834.t1 AT3G21780 30.233 387 223 12 128 490 109 472 1.21e-36 141
MS.gene39834.t1 AT3G46650 26.263 495 293 15 3 490 6 435 1.25e-36 140
MS.gene39834.t1 AT5G05880 26.411 496 298 21 7 490 8 448 1.27e-36 140
MS.gene39834.t1 AT2G23260 26.482 506 294 22 4 490 7 453 1.04e-35 138
MS.gene39834.t1 AT5G05870 27.346 373 232 13 127 490 112 454 7.10e-35 136
MS.gene39834.t1 AT1G22370 31.507 292 181 6 180 469 13 287 8.72e-35 132
MS.gene39834.t1 AT1G64910 27.495 491 290 17 7 490 6 437 1.76e-34 135
MS.gene39834.t1 AT2G26480 25.703 498 311 15 1 491 1 446 2.52e-34 134
MS.gene39834.t1 AT3G21800 26.121 513 306 19 8 490 6 475 5.56e-34 134
MS.gene39834.t1 AT3G29630 29.011 455 257 19 5 447 4 404 2.75e-33 131
MS.gene39834.t1 AT2G22590 26.458 480 283 17 5 461 13 445 3.63e-33 131
MS.gene39834.t1 AT4G27570 26.974 456 281 14 1 450 1 410 4.96e-33 130
MS.gene39834.t1 AT4G15480 25.255 491 329 19 7 490 19 478 1.07e-32 130
MS.gene39834.t1 AT3G21760 25.239 523 314 19 5 490 2 484 1.40e-32 130
MS.gene39834.t1 AT2G23250 25.257 487 306 19 10 490 1 435 1.77e-32 129
MS.gene39834.t1 AT5G17050 26.772 508 296 23 4 491 9 460 2.04e-32 129
MS.gene39834.t1 AT5G05900 25.299 502 295 20 7 490 8 447 2.69e-32 129
MS.gene39834.t1 AT4G15550 26.482 506 301 19 6 487 12 470 2.83e-32 129
MS.gene39834.t1 AT3G21750 23.404 517 319 15 5 492 2 470 6.15e-32 128
MS.gene39834.t1 AT5G05890 24.351 501 306 16 7 490 8 452 7.46e-32 127
MS.gene39834.t1 AT4G27560 26.974 456 281 16 1 450 1 410 7.69e-32 127
MS.gene39834.t1 AT1G30530 27.165 508 289 24 4 493 9 453 7.71e-32 127
MS.gene39834.t1 AT4G15500 23.506 502 336 17 1 493 3 465 1.11e-30 124
MS.gene39834.t1 AT5G53990 26.559 497 293 20 7 493 6 440 3.37e-30 122
MS.gene39834.t1 AT4G14090 25.309 486 298 16 2 473 8 442 8.95e-30 121
MS.gene39834.t1 AT5G17030 36.410 195 104 6 281 473 266 442 2.00e-29 120
MS.gene39834.t1 AT5G37950 28.493 365 193 14 65 400 13 338 3.04e-29 118
MS.gene39834.t1 AT3G29630 28.352 455 234 20 5 447 4 378 5.46e-29 119
MS.gene39834.t1 AT1G64920 26.305 498 297 19 4 490 3 441 7.58e-29 119
MS.gene39834.t1 AT5G37950 28.375 363 202 14 65 400 13 344 8.91e-29 117
MS.gene39834.t1 AT4G15490 25.397 504 313 22 7 491 8 467 1.26e-28 119
MS.gene39834.t1 AT4G09500 28.035 453 267 16 3 448 2 402 2.61e-28 117
MS.gene39834.t1 AT3G21560 24.138 493 335 16 6 490 11 472 7.29e-28 116
MS.gene39834.t1 AT2G16890 28.485 330 191 9 7 320 9 309 2.67e-27 112
MS.gene39834.t1 AT2G16890 28.485 330 191 9 7 320 9 309 2.67e-27 112
MS.gene39834.t1 AT1G50580 26.166 493 299 17 5 490 4 438 1.19e-26 112
MS.gene39834.t1 AT2G22930 27.851 456 256 18 7 448 6 402 1.23e-25 109
MS.gene39834.t1 AT5G17040 25.391 512 293 24 1 493 1 442 1.52e-25 109
MS.gene39834.t1 AT5G54060 25.852 499 310 20 8 493 14 465 2.14e-25 109
MS.gene39834.t1 AT5G17040 31.163 215 124 7 281 493 148 340 4.28e-25 106
MS.gene39834.t1 AT4G09500 27.373 453 245 17 3 448 2 377 2.79e-23 102
MS.gene39834.t1 AT3G22250 31.638 177 106 3 281 456 273 435 5.40e-23 102
MS.gene39834.t1 AT2G15490 30.151 199 121 6 1 190 1 190 1.16e-19 89.4
MS.gene39834.t1 AT4G01070 26.683 401 197 15 4 366 5 346 1.19e-19 90.9

Find 110 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCATCAACTACATTAA+AGG 0.165297 5.4:+68921707 MS.gene39834:CDS
AGAGAATGAAGCATAGTAAA+AGG 0.190308 5.4:+68921991 MS.gene39834:CDS
CTTTGGCTTATATATCTATT+TGG 0.201361 5.4:+68921337 MS.gene39834:CDS
AAACAGATTCTGATGAGTTT+TGG 0.224968 5.4:+68921379 MS.gene39834:CDS
TTCACTACTTGTGGTGCTTA+TGG 0.229278 5.4:+68921312 MS.gene39834:CDS
GGGGTTTGTTGGTGCATAAA+TGG 0.250281 5.4:+68922012 MS.gene39834:CDS
TGAACCTTATATTTGCAAAA+TGG 0.269186 5.4:-68922408 None:intergenic
TCTGTGCTTTACATTTCTTT+TGG 0.272218 5.4:+68921816 MS.gene39834:CDS
TGTTGGATATTGCAGATTTA+AGG 0.277079 5.4:-68921008 None:intergenic
CCTTTCAATCATAGCCAATA+TGG 0.288520 5.4:+68921078 MS.gene39834:CDS
CAACTTCCTGTTTGGTGTGT+TGG 0.293531 5.4:+68921678 MS.gene39834:CDS
AGCCAAGGGGTGCCGATTAT+TGG 0.293545 5.4:+68922119 MS.gene39834:CDS
ACATCTGATATAATACAAAT+TGG 0.302473 5.4:-68921234 None:intergenic
GAGAATGAAGCATAGTAAAA+GGG 0.315728 5.4:+68921992 MS.gene39834:CDS
TTCTCTGTGTTCTCTATGTT+TGG 0.322059 5.4:-68921108 None:intergenic
ACCAATGTTGCAAAGAGTTT+AGG 0.341329 5.4:+68921273 MS.gene39834:CDS
GAACCCTTTAATGTAGTTGA+TGG 0.345250 5.4:-68921711 None:intergenic
TTGTGGATGGAATTCTGTTT+TGG 0.364388 5.4:+68922088 MS.gene39834:CDS
GTTGAGGAGATTGAGACATT+AGG 0.368040 5.4:+68921630 MS.gene39834:CDS
CTTCCATCAACTACATTAAA+GGG 0.370069 5.4:+68921708 MS.gene39834:CDS
GGGTTTGTTGGTGCATAAAT+GGG 0.378424 5.4:+68922013 MS.gene39834:CDS
TTGAGGAGATTGAGACATTA+GGG 0.385826 5.4:+68921631 MS.gene39834:CDS
ACTATCTTCAACTTCCTGTT+TGG 0.396628 5.4:+68921670 MS.gene39834:CDS
ATTCTCTCTTCAAAACCTTC+TGG 0.399444 5.4:-68921975 None:intergenic
AAAGATGTTGGTGGAAGAAA+TGG 0.402195 5.4:+68922175 MS.gene39834:CDS
TGTTTGGTGGTAAACCATAT+TGG 0.402848 5.4:-68921092 None:intergenic
GATTGAGATATCATTGTTAG+AGG 0.404936 5.4:-68921040 None:intergenic
CATAGTGATGACACCATTCA+TGG 0.404967 5.4:+68920882 MS.gene39834:CDS
TTTGGTGTAATCTTCCTCAT+AGG 0.408997 5.4:+68921355 MS.gene39834:CDS
TGTGGAAAGTGTGATTTCTA+AGG 0.411976 5.4:+68922223 MS.gene39834:CDS
AATAGAGAAAGGTGAAGAAA+AGG 0.413934 5.4:+68922349 MS.gene39834:CDS
CAGCTGATGGAGCTGATAAC+TGG 0.415674 5.4:+68921544 MS.gene39834:CDS
GCATAGTAAAAGGGGTTTGT+TGG 0.418981 5.4:+68922001 MS.gene39834:CDS
TGGGTTATTAGGCCACCTTT+TGG 0.429078 5.4:+68921915 MS.gene39834:CDS
TGACATTAATGCAGAGTTCA+AGG 0.433210 5.4:+68921941 MS.gene39834:CDS
AGAGGACCAACACACCAAAC+AGG 0.444461 5.4:-68921684 None:intergenic
GCAAGTGGCCAACCAATAAT+CGG 0.450197 5.4:-68922131 None:intergenic
AAGATGTTGGTGGAAGAAAT+GGG 0.464038 5.4:+68922176 MS.gene39834:CDS
GCACTTTCTATGAAATCTGC+TGG 0.465683 5.4:+68921591 MS.gene39834:CDS
AGGAAAGGGAAAAGAGATGA+AGG 0.466069 5.4:+68922286 MS.gene39834:CDS
AAGAGCTAAGAGGAGTTTCA+AGG 0.471920 5.4:-68921176 None:intergenic
ATCAAAGATCACACAACAAG+AGG 0.472717 5.4:+68921203 MS.gene39834:CDS
AATAAGTGCTTCACAAATGA+TGG 0.472776 5.4:+68921851 MS.gene39834:CDS
TTGTGGTGCTTATGGAACTT+TGG 0.474827 5.4:+68921320 MS.gene39834:CDS
TCTGTGTTCTCTATGTTTGG+TGG 0.481332 5.4:-68921105 None:intergenic
GCATTCTTCAAGAGCTATGC+CGG 0.481619 5.4:-68921763 None:intergenic
TCCTAAACTCTTTGCAACAT+TGG 0.482719 5.4:-68921274 None:intergenic
GCATAAATGGGGACCTCAGT+TGG 0.485337 5.4:+68922025 MS.gene39834:CDS
ATTCTGTCACACAAATCAAC+AGG 0.492773 5.4:+68922050 MS.gene39834:CDS
TTTAAGGTGCTGAATGTTGA+GGG 0.493079 5.4:-68920992 None:intergenic
TTTCTTGCTAAGGCTAGGAA+TGG 0.493895 5.4:-68920922 None:intergenic
GAAGGTCATAGAAATAGTTA+TGG 0.494649 5.4:+68922256 MS.gene39834:CDS
ATAGAGAAAGGTGAAGAAAA+GGG 0.497514 5.4:+68922350 MS.gene39834:CDS
TATCGTGCCGGAAAAGAATC+CGG 0.505155 5.4:+68921744 MS.gene39834:CDS
AGAATGAAGCATAGTAAAAG+GGG 0.508786 5.4:+68921993 MS.gene39834:CDS
CAAATGATGGCATTGGCTGA+AGG 0.509427 5.4:+68921864 MS.gene39834:CDS
TTTGATATTAAAGAGCTAAG+AGG 0.511656 5.4:-68921186 None:intergenic
AACCAATAATCGGCACCCCT+TGG 0.512242 5.4:-68922121 None:intergenic
CCATATTGGCTATGATTGAA+AGG 0.514637 5.4:-68921078 None:intergenic
GTGCTGAATGTTGAGGGGAG+TGG 0.516394 5.4:-68920986 None:intergenic
AGCATACAATGCAAAGATGT+TGG 0.525748 5.4:+68922163 MS.gene39834:CDS
GATGGCATTGGCTGAAGGGT+TGG 0.527119 5.4:+68921869 MS.gene39834:CDS
GCATTAATGTCAAAACCAAA+AGG 0.529138 5.4:-68921930 None:intergenic
AGTTATGGATCAAGAAGGAA+AGG 0.531800 5.4:+68922271 MS.gene39834:CDS
CATTTCTAAGTCATTGTGGA+TGG 0.533477 5.4:+68922075 MS.gene39834:CDS
AGAGAGGCAACAATAGAGAA+AGG 0.537343 5.4:+68922338 MS.gene39834:CDS
ATGCAGAGTTCAAGGCAGAA+TGG 0.538105 5.4:+68921949 MS.gene39834:CDS
TTCTAAGGAAGATGTGAAGA+AGG 0.540427 5.4:+68922238 MS.gene39834:CDS
CTGAATGTTGAGGGGAGTGG+TGG 0.543214 5.4:-68920983 None:intergenic
GGGCTCTTCATTGAGAGCAA+TGG 0.546445 5.4:+68922370 MS.gene39834:CDS
TTTCTATGAAATCTGCTGGA+TGG 0.547511 5.4:+68921595 MS.gene39834:CDS
AATATATCATTCACTACTTG+TGG 0.552017 5.4:+68921303 MS.gene39834:CDS
AAGGGGTGCCGATTATTGGT+TGG 0.558123 5.4:+68922123 MS.gene39834:CDS
GTTAGAGGAAGAAAATGTGT+TGG 0.559529 5.4:-68921025 None:intergenic
ATAGAAAGTGCTATCTGTGG+AGG 0.568920 5.4:-68921579 None:intergenic
TATGCTTGCTCTGCTGCAAG+TGG 0.572280 5.4:-68922146 None:intergenic
CCTTTAATGTAGTTGATGGA+AGG 0.574557 5.4:-68921707 None:intergenic
AGATATCTAAGAGCAGCTGA+TGG 0.574582 5.4:+68921531 MS.gene39834:CDS
TCTGATATAATACAAATTGG+AGG 0.576021 5.4:-68921231 None:intergenic
ATTTAAGGTGCTGAATGTTG+AGG 0.577240 5.4:-68920993 None:intergenic
AGATGTTGGTGGAAGAAATG+GGG 0.579042 5.4:+68922177 MS.gene39834:CDS
CATAGCTCTTGAAGAATGCA+TGG 0.580876 5.4:+68921767 MS.gene39834:CDS
GAAATAGTTATGGATCAAGA+AGG 0.581158 5.4:+68922266 MS.gene39834:CDS
AAATGATGGCATTGGCTGAA+GGG 0.582808 5.4:+68921865 MS.gene39834:CDS
TCAAATTCAAAGTATCGTGC+CGG 0.583474 5.4:+68921732 MS.gene39834:CDS
GGTTTGTTGGTGCATAAATG+GGG 0.589872 5.4:+68922014 MS.gene39834:CDS
TGCTTCACAAATGATGGCAT+TGG 0.592228 5.4:+68921857 MS.gene39834:CDS
AGATGACCATGTGCCATGAA+TGG 0.594468 5.4:-68920895 None:intergenic
AAGGCAGAATGGTTACCAGA+AGG 0.597416 5.4:+68921960 MS.gene39834:CDS
ATCTATGCATCTGAGAGATG+TGG 0.598533 5.4:-68921512 None:intergenic
AATGTAGTTGATGGAAGGAG+AGG 0.600382 5.4:-68921702 None:intergenic
GTTATGGATCAAGAAGGAAA+GGG 0.601148 5.4:+68922272 MS.gene39834:CDS
GGAGCATTTCTAAGTCATTG+TGG 0.609955 5.4:+68922071 MS.gene39834:CDS
AGTTTGATTATATCAGCTAG+AGG 0.618867 5.4:-68921135 None:intergenic
TCAAAGATCACACAACAAGA+GGG 0.619274 5.4:+68921204 MS.gene39834:CDS
GATGTTGGTGGAAGAAATGG+GGG 0.621093 5.4:+68922178 MS.gene39834:CDS
TTTGGAGAGTCTTAGCCAAG+GGG 0.622624 5.4:+68922106 MS.gene39834:CDS
ATACAATGCAAAGATGTTGG+TGG 0.623747 5.4:+68922166 MS.gene39834:CDS
TAGAAAGTGCTATCTGTGGA+GGG 0.628315 5.4:-68921578 None:intergenic
TTCATAGAAAGTGCTATCTG+TGG 0.629318 5.4:-68921582 None:intergenic
GATTGAAAGGTAATTCAGCA+AGG 0.631413 5.4:-68921065 None:intergenic
TTAAGGTGCTGAATGTTGAG+GGG 0.636731 5.4:-68920991 None:intergenic
TGTGACAGAATCTCCAACTG+AGG 0.639031 5.4:-68922038 None:intergenic
CTCTTGAAGAATGCATGGAG+TGG 0.645200 5.4:+68921772 MS.gene39834:CDS
ATGGATTTGTAACACTGTTG+AGG 0.651756 5.4:+68921614 MS.gene39834:CDS
ATGACACCATTCATGGCACA+TGG 0.659660 5.4:+68920889 MS.gene39834:CDS
TTAATGTCAAAACCAAAAGG+TGG 0.668183 5.4:-68921927 None:intergenic
AATGGTGTCATCACTATGTG+TGG 0.687624 5.4:-68920877 None:intergenic
GATTGCAGTACACATGAGAG+AGG 0.690334 5.4:+68922322 MS.gene39834:CDS
TGTGGAATTGACAAGAACTG+TGG 0.715420 5.4:+68922205 MS.gene39834:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATCTGATATAATACAAAT+TGG - chr5.4:68921237-68921256 None:intergenic 20.0%
!!! ATTATATCAGATGTTTTTCT+TGG + chr5.4:68921243-68921262 MS.gene39834:CDS 20.0%
! AATATATCATTCACTACTTG+TGG + chr5.4:68921303-68921322 MS.gene39834:CDS 25.0%
! TCTGATATAATACAAATTGG+AGG - chr5.4:68921234-68921253 None:intergenic 25.0%
! TTTGATATTAAAGAGCTAAG+AGG - chr5.4:68921189-68921208 None:intergenic 25.0%
!! AAAGTGAGAAACTTTTCATT+TGG + chr5.4:68921895-68921914 MS.gene39834:CDS 25.0%
!! AAGTGAGAAACTTTTCATTT+GGG + chr5.4:68921896-68921915 MS.gene39834:CDS 25.0%
!! CTTTGGCTTATATATCTATT+TGG + chr5.4:68921337-68921356 MS.gene39834:CDS 25.0%
!! TTCTTGAATTTTTCTTGCTA+AGG - chr5.4:68920935-68920954 None:intergenic 25.0%
!!! AACTTTTCATTTGGGTTATT+AGG + chr5.4:68921904-68921923 MS.gene39834:CDS 25.0%
!!! TAGCTTTATATATGATGCTA+GGG + chr5.4:68921469-68921488 MS.gene39834:intron 25.0%
AATAAGTGCTTCACAAATGA+TGG + chr5.4:68921851-68921870 MS.gene39834:CDS 30.0%
AATAGAGAAAGGTGAAGAAA+AGG + chr5.4:68922349-68922368 MS.gene39834:CDS 30.0%
AGAATGAAGCATAGTAAAAG+GGG + chr5.4:68921993-68922012 MS.gene39834:CDS 30.0%
AGAGAATGAAGCATAGTAAA+AGG + chr5.4:68921991-68922010 MS.gene39834:CDS 30.0%
AGTTTGATTATATCAGCTAG+AGG - chr5.4:68921138-68921157 None:intergenic 30.0%
ATAGAGAAAGGTGAAGAAAA+GGG + chr5.4:68922350-68922369 MS.gene39834:CDS 30.0%
CTTCCATCAACTACATTAAA+GGG + chr5.4:68921708-68921727 MS.gene39834:CDS 30.0%
GAAATAGTTATGGATCAAGA+AGG + chr5.4:68922266-68922285 MS.gene39834:CDS 30.0%
GAAGGTCATAGAAATAGTTA+TGG + chr5.4:68922256-68922275 MS.gene39834:CDS 30.0%
GAGAATGAAGCATAGTAAAA+GGG + chr5.4:68921992-68922011 MS.gene39834:CDS 30.0%
GATTGAGATATCATTGTTAG+AGG - chr5.4:68921043-68921062 None:intergenic 30.0%
GCATTAATGTCAAAACCAAA+AGG - chr5.4:68921933-68921952 None:intergenic 30.0%
TGTTGGATATTGCAGATTTA+AGG - chr5.4:68921011-68921030 None:intergenic 30.0%
TTAATGTCAAAACCAAAAGG+TGG - chr5.4:68921930-68921949 None:intergenic 30.0%
! AAACAGATTCTGATGAGTTT+TGG + chr5.4:68921379-68921398 MS.gene39834:CDS 30.0%
! AACAGATTCTGATGAGTTTT+GGG + chr5.4:68921380-68921399 MS.gene39834:CDS 30.0%
! ATCAGATGTTTTTCTTGGTT+GGG + chr5.4:68921248-68921267 MS.gene39834:CDS 30.0%
! TATCAGATGTTTTTCTTGGT+TGG + chr5.4:68921247-68921266 MS.gene39834:CDS 30.0%
! TCTGTGCTTTACATTTCTTT+TGG + chr5.4:68921816-68921835 MS.gene39834:CDS 30.0%
!! CTAGCTTTATATATGATGCT+AGG + chr5.4:68921468-68921487 MS.gene39834:intron 30.0%
!! TGAGATATTTTTGTAGTACC+TGG - chr5.4:68921408-68921427 None:intergenic 30.0%
ACCAATGTTGCAAAGAGTTT+AGG + chr5.4:68921273-68921292 MS.gene39834:CDS 35.0%
ACTATCTTCAACTTCCTGTT+TGG + chr5.4:68921670-68921689 MS.gene39834:CDS 35.0%
AGCATACAATGCAAAGATGT+TGG + chr5.4:68922163-68922182 MS.gene39834:CDS 35.0%
AGTTATGGATCAAGAAGGAA+AGG + chr5.4:68922271-68922290 MS.gene39834:CDS 35.0%
ATACAATGCAAAGATGTTGG+TGG + chr5.4:68922166-68922185 MS.gene39834:CDS 35.0%
ATCAAAGATCACACAACAAG+AGG + chr5.4:68921203-68921222 MS.gene39834:CDS 35.0%
ATGGATTTGTAACACTGTTG+AGG + chr5.4:68921614-68921633 MS.gene39834:CDS 35.0%
ATTCTCTCTTCAAAACCTTC+TGG - chr5.4:68921978-68921997 None:intergenic 35.0%
ATTCTGTCACACAAATCAAC+AGG + chr5.4:68922050-68922069 MS.gene39834:CDS 35.0%
CATTTCTAAGTCATTGTGGA+TGG + chr5.4:68922075-68922094 MS.gene39834:CDS 35.0%
CCTTCCATCAACTACATTAA+AGG + chr5.4:68921707-68921726 MS.gene39834:CDS 35.0%
CCTTTCAATCATAGCCAATA+TGG + chr5.4:68921078-68921097 MS.gene39834:CDS 35.0%
GAACCCTTTAATGTAGTTGA+TGG - chr5.4:68921714-68921733 None:intergenic 35.0%
GATTGAAAGGTAATTCAGCA+AGG - chr5.4:68921068-68921087 None:intergenic 35.0%
GTTAGAGGAAGAAAATGTGT+TGG - chr5.4:68921028-68921047 None:intergenic 35.0%
GTTATGGATCAAGAAGGAAA+GGG + chr5.4:68922272-68922291 MS.gene39834:CDS 35.0%
TCAAAGATCACACAACAAGA+GGG + chr5.4:68921204-68921223 MS.gene39834:CDS 35.0%
TCCTAAACTCTTTGCAACAT+TGG - chr5.4:68921277-68921296 None:intergenic 35.0%
TGACATTAATGCAGAGTTCA+AGG + chr5.4:68921941-68921960 MS.gene39834:CDS 35.0%
TTCTCTGTGTTCTCTATGTT+TGG - chr5.4:68921111-68921130 None:intergenic 35.0%
TTGAGGAGATTGAGACATTA+GGG + chr5.4:68921631-68921650 MS.gene39834:CDS 35.0%
TTTCTATGAAATCTGCTGGA+TGG + chr5.4:68921595-68921614 MS.gene39834:CDS 35.0%
! AAAGATGTTGGTGGAAGAAA+TGG + chr5.4:68922175-68922194 MS.gene39834:CDS 35.0%
! AAGATGTTGGTGGAAGAAAT+GGG + chr5.4:68922176-68922195 MS.gene39834:CDS 35.0%
! CCATATTGGCTATGATTGAA+AGG - chr5.4:68921081-68921100 None:intergenic 35.0%
! GAATTTTTCTTGCTAAGGCT+AGG - chr5.4:68920930-68920949 None:intergenic 35.0%
! TCAGAATCTGTTTTCCTATG+AGG - chr5.4:68921372-68921391 None:intergenic 35.0%
! TGTGGAAAGTGTGATTTCTA+AGG + chr5.4:68922223-68922242 MS.gene39834:CDS 35.0%
! TGTTTGGTGGTAAACCATAT+TGG - chr5.4:68921095-68921114 None:intergenic 35.0%
! TTCTAAGGAAGATGTGAAGA+AGG + chr5.4:68922238-68922257 MS.gene39834:CDS 35.0%
! TTGTGGATGGAATTCTGTTT+TGG + chr5.4:68922088-68922107 MS.gene39834:CDS 35.0%
! TTTGGTGTAATCTTCCTCAT+AGG + chr5.4:68921355-68921374 MS.gene39834:CDS 35.0%
!! ATGTGGAATCTGTAGTTTTG+AGG - chr5.4:68921498-68921517 None:intergenic 35.0%
!! ATTTAAGGTGCTGAATGTTG+AGG - chr5.4:68920996-68921015 None:intergenic 35.0%
!! CCTTTAATGTAGTTGATGGA+AGG - chr5.4:68921710-68921729 None:intergenic 35.0%
!! TCAAATTCAAAGTATCGTGC+CGG + chr5.4:68921732-68921751 MS.gene39834:CDS 35.0%
!! TTCATAGAAAGTGCTATCTG+TGG - chr5.4:68921585-68921604 None:intergenic 35.0%
!! TTTAAGGTGCTGAATGTTGA+GGG - chr5.4:68920995-68921014 None:intergenic 35.0%
!!! TGTGGAATCTGTAGTTTTGA+GGG - chr5.4:68921497-68921516 None:intergenic 35.0%
AAGAGCTAAGAGGAGTTTCA+AGG - chr5.4:68921179-68921198 None:intergenic 40.0%
AGAGAGGCAACAATAGAGAA+AGG + chr5.4:68922338-68922357 MS.gene39834:CDS 40.0%
AGATATCTAAGAGCAGCTGA+TGG + chr5.4:68921531-68921550 MS.gene39834:CDS 40.0%
AGGAAAGGGAAAAGAGATGA+AGG + chr5.4:68922286-68922305 MS.gene39834:CDS 40.0%
ATCTATGCATCTGAGAGATG+TGG - chr5.4:68921515-68921534 None:intergenic 40.0%
CATAGCTCTTGAAGAATGCA+TGG + chr5.4:68921767-68921786 MS.gene39834:CDS 40.0%
CATAGTGATGACACCATTCA+TGG + chr5.4:68920882-68920901 MS.gene39834:CDS 40.0%
GCACTTTCTATGAAATCTGC+TGG + chr5.4:68921591-68921610 MS.gene39834:CDS 40.0%
GCATAGTAAAAGGGGTTTGT+TGG + chr5.4:68922001-68922020 MS.gene39834:CDS 40.0%
GTTGAGGAGATTGAGACATT+AGG + chr5.4:68921630-68921649 MS.gene39834:CDS 40.0%
TCTGTGTTCTCTATGTTTGG+TGG - chr5.4:68921108-68921127 None:intergenic 40.0%
TGCTTCACAAATGATGGCAT+TGG + chr5.4:68921857-68921876 MS.gene39834:CDS 40.0%
TGTGGAATTGACAAGAACTG+TGG + chr5.4:68922205-68922224 MS.gene39834:CDS 40.0%
TTCACTACTTGTGGTGCTTA+TGG + chr5.4:68921312-68921331 MS.gene39834:CDS 40.0%
TTGTGGTGCTTATGGAACTT+TGG + chr5.4:68921320-68921339 MS.gene39834:CDS 40.0%
TTTCTTGCTAAGGCTAGGAA+TGG - chr5.4:68920925-68920944 None:intergenic 40.0%
! AGATGTTGGTGGAAGAAATG+GGG + chr5.4:68922177-68922196 MS.gene39834:CDS 40.0%
! GGAGCATTTCTAAGTCATTG+TGG + chr5.4:68922071-68922090 MS.gene39834:CDS 40.0%
! GGTGGCTATTGTGATTTTGA+AGG - chr5.4:68920968-68920987 None:intergenic 40.0%
!! AAATGATGGCATTGGCTGAA+GGG + chr5.4:68921865-68921884 MS.gene39834:CDS 40.0%
!! AATGGTGTCATCACTATGTG+TGG - chr5.4:68920880-68920899 None:intergenic 40.0%
!! AATGTAGTTGATGGAAGGAG+AGG - chr5.4:68921705-68921724 None:intergenic 40.0%
!! ATAGAAAGTGCTATCTGTGG+AGG - chr5.4:68921582-68921601 None:intergenic 40.0%
!! GGGTTTGTTGGTGCATAAAT+GGG + chr5.4:68922013-68922032 MS.gene39834:CDS 40.0%
!! GGTTTGTTGGTGCATAAATG+GGG + chr5.4:68922014-68922033 MS.gene39834:CDS 40.0%
!! TAGAAAGTGCTATCTGTGGA+GGG - chr5.4:68921581-68921600 None:intergenic 40.0%
!! TTAAGGTGCTGAATGTTGAG+GGG - chr5.4:68920994-68921013 None:intergenic 40.0%
!! TTTTGGAGAGTCTTAGCCAA+GGG + chr5.4:68922105-68922124 MS.gene39834:CDS 40.0%
AAGGCAGAATGGTTACCAGA+AGG + chr5.4:68921960-68921979 MS.gene39834:CDS 45.0%
AGATGACCATGTGCCATGAA+TGG - chr5.4:68920898-68920917 None:intergenic 45.0%
ATGACACCATTCATGGCACA+TGG + chr5.4:68920889-68920908 MS.gene39834:CDS 45.0%
ATGCAGAGTTCAAGGCAGAA+TGG + chr5.4:68921949-68921968 MS.gene39834:CDS 45.0%
CTCTTGAAGAATGCATGGAG+TGG + chr5.4:68921772-68921791 MS.gene39834:CDS 45.0%
GATTGCAGTACACATGAGAG+AGG + chr5.4:68922322-68922341 MS.gene39834:CDS 45.0%
GCAAGTGGCCAACCAATAAT+CGG - chr5.4:68922134-68922153 None:intergenic 45.0%
GCATTCTTCAAGAGCTATGC+CGG - chr5.4:68921766-68921785 None:intergenic 45.0%
TATCGTGCCGGAAAAGAATC+CGG + chr5.4:68921744-68921763 MS.gene39834:CDS 45.0%
TGTGACAGAATCTCCAACTG+AGG - chr5.4:68922041-68922060 None:intergenic 45.0%
TTTGGAGAGTCTTAGCCAAG+GGG + chr5.4:68922106-68922125 MS.gene39834:CDS 45.0%
! AGCTATGCCGGATTCTTTTC+CGG - chr5.4:68921754-68921773 None:intergenic 45.0%
! GATGTTGGTGGAAGAAATGG+GGG + chr5.4:68922178-68922197 MS.gene39834:CDS 45.0%
! TGGGTTATTAGGCCACCTTT+TGG + chr5.4:68921915-68921934 MS.gene39834:CDS 45.0%
!! CAAATGATGGCATTGGCTGA+AGG + chr5.4:68921864-68921883 MS.gene39834:CDS 45.0%
!! CAACTTCCTGTTTGGTGTGT+TGG + chr5.4:68921678-68921697 MS.gene39834:CDS 45.0%
!! GGGGTTTGTTGGTGCATAAA+TGG + chr5.4:68922012-68922031 MS.gene39834:CDS 45.0%
!!! GTTTTGGAGAGTCTTAGCCA+AGG + chr5.4:68922104-68922123 MS.gene39834:CDS 45.0%
!!! TCTGATGAGTTTTGGGTTCC+AGG + chr5.4:68921387-68921406 MS.gene39834:CDS 45.0%
AACCAATAATCGGCACCCCT+TGG - chr5.4:68922124-68922143 None:intergenic 50.0%
AGAGGACCAACACACCAAAC+AGG - chr5.4:68921687-68921706 None:intergenic 50.0%
CAGCTGATGGAGCTGATAAC+TGG + chr5.4:68921544-68921563 MS.gene39834:CDS 50.0%
GCATAAATGGGGACCTCAGT+TGG + chr5.4:68922025-68922044 MS.gene39834:CDS 50.0%
GGGCTCTTCATTGAGAGCAA+TGG + chr5.4:68922370-68922389 MS.gene39834:CDS 50.0%
TATGCTTGCTCTGCTGCAAG+TGG - chr5.4:68922149-68922168 None:intergenic 50.0%
!! AAGGGGTGCCGATTATTGGT+TGG + chr5.4:68922123-68922142 MS.gene39834:CDS 50.0%
CTGAATGTTGAGGGGAGTGG+TGG - chr5.4:68920986-68921005 None:intergenic 55.0%
GGAAGAAATGGGGGTGAGTG+TGG + chr5.4:68922187-68922206 MS.gene39834:CDS 55.0%
GTGCTGAATGTTGAGGGGAG+TGG - chr5.4:68920989-68921008 None:intergenic 55.0%
!! AGCCAAGGGGTGCCGATTAT+TGG + chr5.4:68922119-68922138 MS.gene39834:CDS 55.0%
!! GATGGCATTGGCTGAAGGGT+TGG + chr5.4:68921869-68921888 MS.gene39834:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 68920862 68922424 68920862 ID=MS.gene39834
chr5.4 mRNA 68920862 68922424 68920862 ID=MS.gene39834.t1;Parent=MS.gene39834
chr5.4 exon 68920862 68921408 68920862 ID=MS.gene39834.t1.exon1;Parent=MS.gene39834.t1
chr5.4 CDS 68920862 68921408 68920862 ID=cds.MS.gene39834.t1;Parent=MS.gene39834.t1
chr5.4 exon 68921490 68922424 68921490 ID=MS.gene39834.t1.exon2;Parent=MS.gene39834.t1
chr5.4 CDS 68921490 68922424 68921490 ID=cds.MS.gene39834.t1;Parent=MS.gene39834.t1
Gene Sequence

>MS.gene39834

ATGGCAGAGAAGAAACCACACATAGTGATGACACCATTCATGGCACATGGTCATCTCATTCCATTCCTAGCCTTAGCAAGAAAAATTCAAGAAACAACTACTACCTTCAAAATCACAATAGCCACCACTCCCCTCAACATTCAGCACCTTAAATCTGCAATATCCAACACATTTTCTTCCTCTAACAATGATATCTCAATCAACCTTGCTGAATTACCTTTCAATCATAGCCAATATGGTTTACCACCAAACATAGAGAACACAGAGAAGCTTCCTCTAGCTGATATAATCAAACTCTTTCAAGCATCAACTAGCCTTGAAACTCCTCTTAGCTCTTTAATATCAAAGATCACACAACAAGAGGGTCAACCTCCAATTTGTATTATATCAGATGTTTTTCTTGGTTGGGTTACCAATGTTGCAAAGAGTTTAGGAACTAAGAATATATCATTCACTACTTGTGGTGCTTATGGAACTTTGGCTTATATATCTATTTGGTGTAATCTTCCTCATAGGAAAACAGATTCTGATGAGTTTTGGGTTCCAGGTACTACAAAAATATCTCATTTATAACTATTTTTTGTTCAGCACAAAAACAAAATCTAACTAGCTTTATATATGATGCTAGGGTTCCCTCAAAACTACAGATTCCACATCTCTCAGATGCATAGATATCTAAGAGCAGCTGATGGAGCTGATAACTGGTCAAAATTCTTCCCTCCACAGATAGCACTTTCTATGAAATCTGCTGGATGGATTTGTAACACTGTTGAGGAGATTGAGACATTAGGGCTGCAACTATTGAAGAACTATCTTCAACTTCCTGTTTGGTGTGTTGGTCCTCTCCTTCCATCAACTACATTAAAGGGTTCAAATTCAAAGTATCGTGCCGGAAAAGAATCCGGCATAGCTCTTGAAGAATGCATGGAGTGGCTTGATTTGAAAGATGAGAATTCTGTGCTTTACATTTCTTTTGGATCACAGAACACAATAAGTGCTTCACAAATGATGGCATTGGCTGAAGGGTTGGAAGAAAGTGAGAAACTTTTCATTTGGGTTATTAGGCCACCTTTTGGTTTTGACATTAATGCAGAGTTCAAGGCAGAATGGTTACCAGAAGGTTTTGAAGAGAGAATGAAGCATAGTAAAAGGGGTTTGTTGGTGCATAAATGGGGACCTCAGTTGGAGATTCTGTCACACAAATCAACAGGAGCATTTCTAAGTCATTGTGGATGGAATTCTGTTTTGGAGAGTCTTAGCCAAGGGGTGCCGATTATTGGTTGGCCACTTGCAGCAGAGCAAGCATACAATGCAAAGATGTTGGTGGAAGAAATGGGGGTGAGTGTGGAATTGACAAGAACTGTGGAAAGTGTGATTTCTAAGGAAGATGTGAAGAAGGTCATAGAAATAGTTATGGATCAAGAAGGAAAGGGAAAAGAGATGAAGGAGAAAGCAAATGAGATTGCAGTACACATGAGAGAGGCAACAATAGAGAAAGGTGAAGAAAAGGGCTCTTCATTGAGAGCAATGGATGATTTTGTCAGAACCATTTTGCAAATATAA
Protein sequence

>MS.gene39834.t1

MAEKKPHIVMTPFMAHGHLIPFLALARKIQETTTTFKITIATTPLNIQHLKSAISNTFSSSNNDISINLAELPFNHSQYGLPPNIENTEKLPLADIIKLFQASTSLETPLSSLISKITQQEGQPPICIISDVFLGWVTNVAKSLGTKNISFTTCGAYGTLAYISIWCNLPHRKTDSDEFWVPGFPQNYRFHISQMHRYLRAADGADNWSKFFPPQIALSMKSAGWICNTVEEIETLGLQLLKNYLQLPVWCVGPLLPSTTLKGSNSKYRAGKESGIALEECMEWLDLKDENSVLYISFGSQNTISASQMMALAEGLEESEKLFIWVIRPPFGFDINAEFKAEWLPEGFEERMKHSKRGLLVHKWGPQLEILSHKSTGAFLSHCGWNSVLESLSQGVPIIGWPLAAEQAYNAKMLVEEMGVSVELTRTVESVISKEDVKKVIEIVMDQEGKGKEMKEKANEIAVHMREATIEKGEEKGSSLRAMDDFVRTILQI