AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41424

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41424.t1 MTR_1g100647 86.735 196 16 2 16 201 12 207 3.84e-95 288
MS.gene41424.t1 MTR_1g100647 93.007 143 10 0 383 525 67 209 6.58e-83 256
MS.gene41424.t1 MTR_1g100647 92.908 141 10 0 222 362 67 207 8.06e-81 251
MS.gene41424.t1 MTR_8g031370 60.452 177 61 2 25 201 31 198 4.57e-61 199
MS.gene41424.t1 MTR_8g031370 65.891 129 44 0 397 525 72 200 4.38e-51 173
MS.gene41424.t1 MTR_8g031370 66.142 127 43 0 236 362 72 198 1.16e-49 169
MS.gene41424.t1 MTR_7g076730 67.769 121 39 0 405 525 13 133 4.39e-48 163
MS.gene41424.t1 MTR_7g076730 68.067 119 38 0 83 201 13 131 1.16e-46 159
MS.gene41424.t1 MTR_7g076730 68.067 119 38 0 244 362 13 131 1.16e-46 159
MS.gene41424.t1 MTR_8g097320 58.400 125 52 0 401 525 74 198 2.62e-43 153
MS.gene41424.t1 MTR_8g097320 57.031 128 55 0 79 206 74 201 2.21e-42 150
MS.gene41424.t1 MTR_8g097320 57.031 128 55 0 240 367 74 201 2.21e-42 150
MS.gene41424.t1 MTR_5g010590 61.475 122 47 0 404 525 86 207 4.91e-42 149
MS.gene41424.t1 MTR_5g010590 61.667 120 46 0 82 201 86 205 1.03e-40 146
MS.gene41424.t1 MTR_5g010590 61.667 120 46 0 243 362 86 205 1.03e-40 146
MS.gene41424.t1 MTR_8g097320 57.031 128 52 1 401 525 74 201 2.93e-41 147
MS.gene41424.t1 MTR_8g097320 55.725 131 55 1 79 206 74 204 2.42e-40 145
MS.gene41424.t1 MTR_8g097320 55.725 131 55 1 240 367 74 204 2.42e-40 145
MS.gene41424.t1 MTR_5g010590 62.069 58 22 0 82 139 86 143 1.38e-14 72.8
MS.gene41424.t1 MTR_5g010590 62.069 58 22 0 243 300 86 143 1.38e-14 72.8
MS.gene41424.t1 MTR_5g010590 62.069 58 22 0 404 461 86 143 1.38e-14 72.8
MS.gene41424.t1 MTR_1g052560 33.607 122 81 0 77 198 148 269 4.56e-13 70.1
MS.gene41424.t1 MTR_1g052560 33.607 122 81 0 238 359 148 269 4.56e-13 70.1
MS.gene41424.t1 MTR_1g052560 33.607 122 81 0 399 520 148 269 4.56e-13 70.1
MS.gene41424.t1 MTR_7g091990 34.959 123 79 1 76 198 154 275 7.90e-11 63.5
MS.gene41424.t1 MTR_7g091990 34.959 123 79 1 237 359 154 275 7.90e-11 63.5
MS.gene41424.t1 MTR_7g091990 34.959 123 79 1 398 520 154 275 7.90e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41424.t1 AT5G23750 70.667 150 38 2 55 203 57 201 8.50e-61 199
MS.gene41424.t1 AT5G23750 75.758 132 32 0 394 525 70 201 6.86e-60 196
MS.gene41424.t1 AT5G23750 75.758 132 32 0 233 364 70 201 1.41e-59 196
MS.gene41424.t1 AT3G61260 62.941 170 56 3 33 201 47 210 3.20e-60 198
MS.gene41424.t1 AT3G61260 67.717 127 41 0 399 525 86 212 7.46e-52 176
MS.gene41424.t1 AT3G61260 68.000 125 40 0 238 362 86 210 2.03e-50 172
MS.gene41424.t1 AT5G23750 77.778 126 28 0 400 525 104 229 8.41e-60 197
MS.gene41424.t1 AT5G23750 77.778 126 28 0 78 203 104 229 1.60e-59 196
MS.gene41424.t1 AT5G23750 77.778 126 28 0 239 364 104 229 1.60e-59 196
MS.gene41424.t1 AT5G23750 77.778 126 28 0 400 525 77 202 1.41e-59 196
MS.gene41424.t1 AT5G23750 77.778 126 28 0 78 203 77 202 2.78e-59 195
MS.gene41424.t1 AT5G23750 77.778 126 28 0 239 364 77 202 2.78e-59 195
MS.gene41424.t1 AT3G48940 61.765 170 58 3 37 201 6 173 4.91e-59 193
MS.gene41424.t1 AT3G48940 69.565 138 39 1 391 525 38 175 9.57e-57 187
MS.gene41424.t1 AT3G48940 69.853 136 38 1 230 362 38 173 3.59e-55 183
MS.gene41424.t1 AT2G45820 65.132 152 51 1 50 201 39 188 3.43e-49 168
MS.gene41424.t1 AT2G45820 67.153 137 43 1 391 525 54 190 9.37e-47 162
MS.gene41424.t1 AT2G45820 67.407 135 42 1 230 362 54 188 2.63e-45 158
MS.gene41424.t1 AT1G63295 40.000 145 82 2 217 356 36 180 1.94e-21 92.4
MS.gene41424.t1 AT1G63295 40.000 145 82 2 378 517 36 180 1.94e-21 92.4
MS.gene41424.t1 AT1G63295 46.364 110 59 0 86 195 71 180 2.28e-20 89.4
MS.gene41424.t1 AT1G63295 45.455 121 63 2 408 525 31 151 1.32e-20 89.0
MS.gene41424.t1 AT1G63295 46.364 110 59 0 86 195 31 140 1.37e-20 89.0
MS.gene41424.t1 AT1G63295 46.364 110 59 0 247 356 31 140 1.37e-20 89.0
MS.gene41424.t1 AT4G00670 42.157 102 59 0 97 198 16 117 9.29e-19 82.8
MS.gene41424.t1 AT4G00670 42.157 102 59 0 258 359 16 117 9.29e-19 82.8
MS.gene41424.t1 AT4G00670 42.157 102 59 0 419 520 16 117 9.29e-19 82.8
MS.gene41424.t1 AT2G41870 33.884 121 79 1 406 525 153 273 2.16e-11 65.1
MS.gene41424.t1 AT2G41870 33.913 115 76 0 84 198 153 267 3.24e-11 64.7
MS.gene41424.t1 AT2G41870 33.913 115 76 0 245 359 153 267 3.24e-11 64.7
MS.gene41424.t1 AT3G57540 33.058 121 79 1 406 524 175 295 3.12e-11 64.7
MS.gene41424.t1 AT3G57540 33.043 115 77 0 84 198 175 289 5.98e-11 63.9
MS.gene41424.t1 AT3G57540 33.043 115 77 0 245 359 175 289 5.98e-11 63.9
MS.gene41424.t1 AT1G67590 28.638 213 135 4 9 217 144 343 6.40e-11 64.3

Find 112 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGACCAAAGAGTTTCTT+TGG 0.217523 1.4:-78441959 None:intergenic
AAAAGACCAAAGAGTTTCTT+TGG 0.217523 1.4:-78443873 None:intergenic
AAAAGACCAAAGAGTTTCTT+TGG 0.217523 1.4:-78445787 None:intergenic
TCCTCAGCTACATCTTTCTT+TGG 0.259226 1.4:-78439954 None:intergenic
GGAACAACTAGAGAAGAAAA+AGG 0.285933 1.4:+78441790 MS.gene41424:intron
GGAACAACTAGAGAAGAAAA+AGG 0.285933 1.4:+78443704 MS.gene41424:intron
GGAACAACTAGAGAAGAAAA+AGG 0.285933 1.4:+78445618 MS.gene41424:intron
TCGATAGAGCCGCCCTCTTT+TGG 0.297765 1.4:-78441280 None:intergenic
TCGATAGAGCCGCCCTCTTT+TGG 0.297765 1.4:-78443194 None:intergenic
TCGATAGAGCCGCCCTCTTT+TGG 0.297765 1.4:-78445108 None:intergenic
ACATCTTTCTTTGGAGCCTC+AGG 0.378728 1.4:-78439945 None:intergenic
ACTGTTCTCCCATGCTGTTA+TGG 0.379485 1.4:-78441643 None:intergenic
ACTGTTCTCCCATGCTGTTA+TGG 0.379485 1.4:-78443557 None:intergenic
ACTGTTCTCCCATGCTGTTA+TGG 0.379485 1.4:-78445471 None:intergenic
GCCTCAGGGAGAGGAGGAGA+AGG 0.390077 1.4:-78439930 None:intergenic
ACAGCTCCAAAGAAACTCTT+TGG 0.398417 1.4:+78441953 MS.gene41424:CDS
ACAGCTCCAAAGAAACTCTT+TGG 0.398417 1.4:+78443867 MS.gene41424:CDS
ACAGCTCCAAAGAAACTCTT+TGG 0.398417 1.4:+78445781 MS.gene41424:CDS
AGTTGGCACAGCGCACCAAT+AGG 0.402374 1.4:-78439555 None:intergenic
GTCCATGTTTAGAGGGGAAA+AGG 0.407013 1.4:-78442431 None:intergenic
GTCCATGTTTAGAGGGGAAA+AGG 0.407013 1.4:-78444345 None:intergenic
CATGGACCTCACCTTACCTT+TGG 0.413151 1.4:+78442447 MS.gene41424:CDS
CATGGACCTCACCTTACCTT+TGG 0.413151 1.4:+78444361 MS.gene41424:CDS
AAGAGGTAGCTGCAAAATAC+AGG 0.425184 1.4:+78441921 MS.gene41424:CDS
AAGAGGTAGCTGCAAAATAC+AGG 0.425184 1.4:+78443835 MS.gene41424:CDS
AAGAGGTAGCTGCAAAATAC+AGG 0.425184 1.4:+78445749 MS.gene41424:CDS
CTGAGCTATGACAAGAGCTT+TGG 0.429684 1.4:-78440033 None:intergenic
GCTGCAAAATACAGGGCAAC+TGG 0.430234 1.4:+78441929 MS.gene41424:CDS
GCTGCAAAATACAGGGCAAC+TGG 0.430234 1.4:+78443843 MS.gene41424:CDS
GCTGCAAAATACAGGGCAAC+TGG 0.430234 1.4:+78445757 MS.gene41424:CDS
TTCTTTGGAGCCTCAGGGAG+AGG 0.442969 1.4:-78439939 None:intergenic
AATAAGTTGTCTGTCCCTAT+TGG 0.457363 1.4:+78439540 MS.gene41424:CDS
GAAAAGGGTGGACAGAGAAA+TGG 0.476368 1.4:-78442415 None:intergenic
GAAAAGGGTGGACAGAGAAA+TGG 0.476368 1.4:-78444329 None:intergenic
GCTTTGGAGTCATCAACAAC+AGG 0.488845 1.4:-78440017 None:intergenic
GTTGGCACAGCGCACCAATA+GGG 0.504102 1.4:-78439554 None:intergenic
CAAGGCAGCTGAAGAAAAGA+AGG 0.521517 1.4:+78441856 MS.gene41424:CDS
CAAGGCAGCTGAAGAAAAGA+AGG 0.521517 1.4:+78443770 MS.gene41424:CDS
CAAGGCAGCTGAAGAAAAGA+AGG 0.521517 1.4:+78445684 MS.gene41424:CDS
TCATCAACAACAGGAGGAGG+AGG 0.524276 1.4:-78440008 None:intergenic
TCAACAACAGGAGGAGGAGG+AGG 0.529147 1.4:-78440005 None:intergenic
CCTCAGGGAGAGGAGGAGAA+GGG 0.530917 1.4:-78439929 None:intergenic
TGGTAGGTACTCTTGTGAGT+TGG 0.531008 1.4:-78439572 None:intergenic
GGCTGTCACTAATCAAAGCA+TGG 0.531510 1.4:+78441429 MS.gene41424:CDS
GGCTGTCACTAATCAAAGCA+TGG 0.531510 1.4:+78443343 MS.gene41424:CDS
GGCTGTCACTAATCAAAGCA+TGG 0.531510 1.4:+78445257 MS.gene41424:CDS
CTCAGGGAGAGGAGGAGAAG+GGG 0.532056 1.4:-78439928 None:intergenic
ATAGCTGACTTCCAAAGGTA+AGG 0.539304 1.4:-78442458 None:intergenic
ATAGCTGACTTCCAAAGGTA+AGG 0.539304 1.4:-78444372 None:intergenic
GGAGGAGGATTATTATCTTG+TGG 0.541469 1.4:-78439990 None:intergenic
CAAGAGTTGCAACAGAAAAG+AGG 0.549164 1.4:+78441408 MS.gene41424:CDS
CAAGAGTTGCAACAGAAAAG+AGG 0.549164 1.4:+78443322 MS.gene41424:CDS
CAAGAGTTGCAACAGAAAAG+AGG 0.549164 1.4:+78445236 MS.gene41424:CDS
TCCATGTTTAGAGGGGAAAA+GGG 0.552840 1.4:-78442430 None:intergenic
TCCATGTTTAGAGGGGAAAA+GGG 0.552840 1.4:-78444344 None:intergenic
AAGGTGAGGTCCATGTTTAG+AGG 0.558450 1.4:-78442439 None:intergenic
AAGGTGAGGTCCATGTTTAG+AGG 0.558450 1.4:-78444353 None:intergenic
TTTGGAGCCTCAGGGAGAGG+AGG 0.558769 1.4:-78439936 None:intergenic
AGGTGAGGTCCATGTTTAGA+GGG 0.560803 1.4:-78442438 None:intergenic
AGGTGAGGTCCATGTTTAGA+GGG 0.560803 1.4:-78444352 None:intergenic
CATCTTTCTTTGGAGCCTCA+GGG 0.563937 1.4:-78439944 None:intergenic
ACCATATAGCTGACTTCCAA+AGG 0.569888 1.4:-78442463 None:intergenic
ACCATATAGCTGACTTCCAA+AGG 0.569888 1.4:-78444377 None:intergenic
TGCTGAAGAGAAACCAAAAG+AGG 0.570519 1.4:+78441267 MS.gene41424:CDS
TGCTGAAGAGAAACCAAAAG+AGG 0.570519 1.4:+78443181 MS.gene41424:CDS
TGCTGAAGAGAAACCAAAAG+AGG 0.570519 1.4:+78445095 MS.gene41424:CDS
GAGTCATCAACAACAGGAGG+AGG 0.575285 1.4:-78440011 None:intergenic
TCCAAAGAAAGATGTAGCTG+AGG 0.578942 1.4:+78439953 MS.gene41424:CDS
GCTATGATTGAGGCAAAGAA+AGG 0.579579 1.4:+78441878 MS.gene41424:CDS
GCTATGATTGAGGCAAAGAA+AGG 0.579579 1.4:+78443792 MS.gene41424:CDS
GCTATGATTGAGGCAAAGAA+AGG 0.579579 1.4:+78445706 MS.gene41424:CDS
AACTTTCATCCATAACAGCA+TGG 0.579782 1.4:+78441634 MS.gene41424:CDS
AACTTTCATCCATAACAGCA+TGG 0.579782 1.4:+78443548 MS.gene41424:CDS
AACTTTCATCCATAACAGCA+TGG 0.579782 1.4:+78445462 MS.gene41424:CDS
AGAATTACTCAAAGCAGAAG+AGG 0.586549 1.4:+78441904 MS.gene41424:CDS
AGAATTACTCAAAGCAGAAG+AGG 0.586549 1.4:+78443818 MS.gene41424:CDS
AGAATTACTCAAAGCAGAAG+AGG 0.586549 1.4:+78445732 MS.gene41424:CDS
CAAAATAGCAGCACTTCACA+AGG 0.592299 1.4:+78441838 MS.gene41424:CDS
CAAAATAGCAGCACTTCACA+AGG 0.592299 1.4:+78443752 MS.gene41424:CDS
CAAAATAGCAGCACTTCACA+AGG 0.592299 1.4:+78445666 MS.gene41424:CDS
AGAAAAGAAGGCTATGATTG+AGG 0.593916 1.4:+78441868 MS.gene41424:CDS
AGAAAAGAAGGCTATGATTG+AGG 0.593916 1.4:+78443782 MS.gene41424:CDS
AGAAAAGAAGGCTATGATTG+AGG 0.593916 1.4:+78445696 MS.gene41424:CDS
AGCTGAATTGAGAAAACTTG+AGG 0.599321 1.4:+78441683 MS.gene41424:CDS
AGCTGAATTGAGAAAACTTG+AGG 0.599321 1.4:+78443597 MS.gene41424:CDS
AGCTGAATTGAGAAAACTTG+AGG 0.599321 1.4:+78445511 MS.gene41424:CDS
GCTGTCACTAATCAAAGCAT+GGG 0.606143 1.4:+78441430 MS.gene41424:CDS
GCTGTCACTAATCAAAGCAT+GGG 0.606143 1.4:+78443344 MS.gene41424:CDS
GCTGTCACTAATCAAAGCAT+GGG 0.606143 1.4:+78445258 MS.gene41424:CDS
ACTTTCATCCATAACAGCAT+GGG 0.613867 1.4:+78441635 MS.gene41424:CDS
ACTTTCATCCATAACAGCAT+GGG 0.613867 1.4:+78443549 MS.gene41424:CDS
ACTTTCATCCATAACAGCAT+GGG 0.613867 1.4:+78445463 MS.gene41424:CDS
CCCTTCTCCTCCTCTCCCTG+AGG 0.617803 1.4:+78439929 MS.gene41424:CDS
AGAGGTAGCTGCAAAATACA+GGG 0.626640 1.4:+78441922 MS.gene41424:CDS
AGAGGTAGCTGCAAAATACA+GGG 0.626640 1.4:+78443836 MS.gene41424:CDS
AGAGGTAGCTGCAAAATACA+GGG 0.626640 1.4:+78445750 MS.gene41424:CDS
GCTGAAGAGAAACCAAAAGA+GGG 0.649888 1.4:+78441268 MS.gene41424:CDS
GCTGAAGAGAAACCAAAAGA+GGG 0.649888 1.4:+78443182 MS.gene41424:CDS
GCTGAAGAGAAACCAAAAGA+GGG 0.649888 1.4:+78445096 MS.gene41424:CDS
TTGGAGTCATCAACAACAGG+AGG 0.656015 1.4:-78440014 None:intergenic
ATGTTTAGAGGGGAAAAGGG+TGG 0.662181 1.4:-78442427 None:intergenic
ATGTTTAGAGGGGAAAAGGG+TGG 0.662181 1.4:-78444341 None:intergenic
TGACTTCCAAAGGTAAGGTG+AGG 0.668297 1.4:-78442453 None:intergenic
TGACTTCCAAAGGTAAGGTG+AGG 0.668297 1.4:-78444367 None:intergenic
GAAGAGAAACCAAAAGAGGG+CGG 0.689508 1.4:+78441271 MS.gene41424:CDS
GAAGAGAAACCAAAAGAGGG+CGG 0.689508 1.4:+78443185 MS.gene41424:CDS
GAAGAGAAACCAAAAGAGGG+CGG 0.689508 1.4:+78445099 MS.gene41424:CDS
GGTGAGGTCCATGTTTAGAG+GGG 0.695996 1.4:-78442437 None:intergenic
GGTGAGGTCCATGTTTAGAG+GGG 0.695996 1.4:-78444351 None:intergenic
GAGGGCGGCTCTATCGACCG+TGG 0.735676 1.4:+78441286 MS.gene41424:CDS
GAGGGCGGCTCTATCGACCG+TGG 0.735676 1.4:+78443200 MS.gene41424:CDS
GAGGGCGGCTCTATCGACCG+TGG 0.735676 1.4:+78445114 MS.gene41424:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGAAAAAAATCAATTATA+GGG - chr1.4:78440269-78440288 None:intergenic 10.0%
!!! AAATTATTACTTTTAATAGA+AGG + chr1.4:78440507-78440526 MS.gene41424:intron 10.0%
!!! AATTATTACTTTTAATAGAA+GGG + chr1.4:78440508-78440527 MS.gene41424:intron 10.0%
!!! ACAATTTTATTATAGAAAAA+AGG + chr1.4:78440130-78440149 MS.gene41424:intron 10.0%
!!! GTGTTTAAATTTTATTTTAT+TGG + chr1.4:78440096-78440115 MS.gene41424:intron 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr1.4:78442523-78442542 MS.gene41424:intron 100.0%
! GCGGGGGGGGGGGGGGGGGG+GGG + chr1.4:78442522-78442541 MS.gene41424:intron 100.0%
! GGCGGGGGGGGGGGGGGGGG+GGG + chr1.4:78442521-78442540 MS.gene41424:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1.4:78440599-78440618 MS.gene41424:intron 100.0%
!! ATATAATTCTGTTGTTAATT+TGG + chr1.4:78441220-78441239 MS.gene41424:intron 15.0%
!! TGACTTAAAAACAAATATTA+CGG - chr1.4:78441170-78441189 None:intergenic 15.0%
!!! ATCAATACATATTTTTTATC+TGG + chr1.4:78440318-78440337 MS.gene41424:intron 15.0%
!!! CTTTGAAAAAAATCAATTAT+AGG - chr1.4:78440270-78440289 None:intergenic 15.0%
!!! TATGTTTTATCTATCTATTT+TGG + chr1.4:78440170-78440189 MS.gene41424:intron 15.0%
!!! TTTAAATTTGTGCATATTTT+TGG - chr1.4:78440993-78441012 None:intergenic 15.0%
!! AAAATGAAGATATCACAAAA+AGG + chr1.4:78442500-78442519 MS.gene41424:intron 20.0%
!! AATCTAATCAATTAAGTGTA+TGG + chr1.4:78440842-78440861 MS.gene41424:intron 20.0%
!! ATTATAGTTGTAGAATGAAA+GGG - chr1.4:78439665-78439684 None:intergenic 20.0%
!! CAAATTGAATGAGAATTAAA+TGG - chr1.4:78442154-78442173 None:intergenic 20.0%
!! CTATAATAAAATTGTTTCCT+TGG - chr1.4:78440125-78440144 None:intergenic 20.0%
!! TAATAGCAAAATTGAATTGA+AGG + chr1.4:78440417-78440436 MS.gene41424:intron 20.0%
!! TATTATAGTTGTAGAATGAA+AGG - chr1.4:78439666-78439685 None:intergenic 20.0%
!! TTAATTGATTAGATTGTAGT+TGG - chr1.4:78440837-78440856 None:intergenic 20.0%
!! TTGTATATATCCATTACTTT+GGG + chr1.4:78442120-78442139 MS.gene41424:intron 20.0%
!!! TAATGCTTAATGTGTATTTT+TGG + chr1.4:78441502-78441521 MS.gene41424:intron 20.0%
!!! TCTATTTTGGTTTGTTTTAT+TGG + chr1.4:78440183-78440202 MS.gene41424:intron 20.0%
! AAACAAATATTACGGATGAA+TGG - chr1.4:78441162-78441181 None:intergenic 25.0%
! AAACATGCATTAAGATTCTA+GGG + chr1.4:78440942-78440961 MS.gene41424:intron 25.0%
! AAGAAAGATATTACAAGTGT+TGG - chr1.4:78439709-78439728 None:intergenic 25.0%
! AATACACATTAAGCATTAGA+TGG - chr1.4:78441500-78441519 None:intergenic 25.0%
! ACATAATCAATAGTTGTTGA+AGG + chr1.4:78442307-78442326 MS.gene41424:intron 25.0%
! ACATTGAATGTGACAAAATA+TGG + chr1.4:78441732-78441751 MS.gene41424:intron 25.0%
! ATGTGTAATTATAATGTCTC+AGG - chr1.4:78442291-78442310 None:intergenic 25.0%
! ATTGAATGTGACAAAATATG+GGG + chr1.4:78441734-78441753 MS.gene41424:intron 25.0%
! CATTGAATGTGACAAAATAT+GGG + chr1.4:78441733-78441752 MS.gene41424:intron 25.0%
! GTTGTATATATCCATTACTT+TGG + chr1.4:78442119-78442138 MS.gene41424:intron 25.0%
! TACTAATCTCCTTAGAATTA+TGG - chr1.4:78441565-78441584 None:intergenic 25.0%
! TATATCAATGTGATTATACG+CGG - chr1.4:78441205-78441224 None:intergenic 25.0%
! TTATAGGGAAAATTTGAAGA+TGG - chr1.4:78440254-78440273 None:intergenic 25.0%
!! TCTTTCTAAGAAAGAAGAAT+TGG - chr1.4:78439802-78439821 None:intergenic 25.0%
!!! AAAACGGTAAAGGTTATTTT+GGG - chr1.4:78441126-78441145 None:intergenic 25.0%
!!! AAGAATTGGAACAACTTTTT+TGG - chr1.4:78439788-78439807 None:intergenic 25.0%
!!! GATTCAGATTCTATCTTTTT+TGG - chr1.4:78439858-78439877 None:intergenic 25.0%
!!! TATTCACAAAGTGTTTTCAT+TGG - chr1.4:78442246-78442265 None:intergenic 25.0%
!!! TTAATTACTTTTCACTGTGT+AGG + chr1.4:78441769-78441788 MS.gene41424:intron 25.0%
!!! TTTTATTTTATTGGTTGCCA+AGG + chr1.4:78440105-78440124 MS.gene41424:intron 25.0%
AAAAGACCAAAGAGTTTCTT+TGG - chr1.4:78441962-78441981 None:intergenic 30.0%
AAGTTTACCTACCAGTTTAT+AGG - chr1.4:78442385-78442404 None:intergenic 30.0%
ACAATCATCAGAAAAATTCC+AGG - chr1.4:78440764-78440783 None:intergenic 30.0%
ACTTCATATGCTAACATTAC+AGG + chr1.4:78441349-78441368 MS.gene41424:intron 30.0%
AGAAAAGAAACACATTAGCT+TGG + chr1.4:78441012-78441031 MS.gene41424:intron 30.0%
ATACTCTACATCCTATAAAC+TGG + chr1.4:78442371-78442390 MS.gene41424:intron 30.0%
ATATAAGCGAAATAGTTGAG+AGG + chr1.4:78440361-78440380 MS.gene41424:intron 30.0%
ATCAGAAAAATTCCAGGAAA+TGG - chr1.4:78440758-78440777 None:intergenic 30.0%
ATGAAGATATCACAAAAAGG+CGG + chr1.4:78442503-78442522 MS.gene41424:intron 30.0%
ATTCTACTAAAAGTCTTAGC+TGG - chr1.4:78439608-78439627 None:intergenic 30.0%
ATTGAGTCACCATAATTCTA+AGG + chr1.4:78441553-78441572 MS.gene41424:intron 30.0%
CAAACATGCATTAAGATTCT+AGG + chr1.4:78440941-78440960 MS.gene41424:intron 30.0%
CAATGACAAGATATATACCA+CGG - chr1.4:78441306-78441325 None:intergenic 30.0%
CTAAAACATGAAAACGGTAA+AGG - chr1.4:78441136-78441155 None:intergenic 30.0%
CTAGAATCTTAATGCATGTT+TGG - chr1.4:78440943-78440962 None:intergenic 30.0%
GAACAACTAGAGAAGAAAAA+GGG + chr1.4:78441791-78441810 MS.gene41424:CDS 30.0%
GGAAACTGAGAAAAATACAA+GGG - chr1.4:78440737-78440756 None:intergenic 30.0%
GTAGAGTATAGTTAGATCAA+TGG - chr1.4:78442360-78442379 None:intergenic 30.0%
TAGCATATGAAGTGCATAAA+GGG - chr1.4:78441342-78441361 None:intergenic 30.0%
TATGGTGACTCAATGTAATA+AGG - chr1.4:78441547-78441566 None:intergenic 30.0%
TGGAAACTGAGAAAAATACA+AGG - chr1.4:78440738-78440757 None:intergenic 30.0%
TGGTTCCTAAAACATGAAAA+CGG - chr1.4:78441142-78441161 None:intergenic 30.0%
TTAGCATATGAAGTGCATAA+AGG - chr1.4:78441343-78441362 None:intergenic 30.0%
TTCTACTAAAAGTCTTAGCT+GGG - chr1.4:78439607-78439626 None:intergenic 30.0%
TTGAATGTGACAAAATATGG+GGG + chr1.4:78441735-78441754 MS.gene41424:intron 30.0%
TTGATTAGATTGTAGTTGGA+TGG - chr1.4:78440833-78440852 None:intergenic 30.0%
TTTCTGATGATTGTTCTCTT+AGG + chr1.4:78440770-78440789 MS.gene41424:intron 30.0%
! CTTTACCGTTTTCATGTTTT+AGG + chr1.4:78441134-78441153 MS.gene41424:intron 30.0%
! GAAAACGGTAAAGGTTATTT+TGG - chr1.4:78441127-78441146 None:intergenic 30.0%
! GGTTTTTATTCCCAAAGTAA+TGG - chr1.4:78442133-78442152 None:intergenic 30.0%
! TGTTTTCTTCATGTGTGATT+TGG + chr1.4:78442041-78442060 MS.gene41424:intron 30.0%
!!! TGTTTTATTGGACTGGTATA+AGG + chr1.4:78440195-78440214 MS.gene41424:intron 30.0%
!!! TTTGGTTTGTTTTATTGGAC+TGG + chr1.4:78440188-78440207 MS.gene41424:intron 30.0%
AACTTTCATCCATAACAGCA+TGG + chr1.4:78441634-78441653 MS.gene41424:CDS 35.0%
AATAAGTTGTCTGTCCCTAT+TGG + chr1.4:78439540-78439559 MS.gene41424:CDS 35.0%
ACTCACTCATTCTTAGATGT+TGG + chr1.4:78442206-78442225 MS.gene41424:intron 35.0%
ACTTTCATCCATAACAGCAT+GGG + chr1.4:78441635-78441654 MS.gene41424:CDS 35.0%
AGAAAAGAAGGCTATGATTG+AGG + chr1.4:78441868-78441887 MS.gene41424:CDS 35.0%
AGAATTACTCAAAGCAGAAG+AGG + chr1.4:78441904-78441923 MS.gene41424:CDS 35.0%
AGCTGAATTGAGAAAACTTG+AGG + chr1.4:78441683-78441702 MS.gene41424:CDS 35.0%
CGAACTCAAACTGATAAAAC+CGG - chr1.4:78441102-78441121 None:intergenic 35.0%
GATTGTAGTTGGATGGTAAT+TGG - chr1.4:78440826-78440845 None:intergenic 35.0%
GGAACAACTAGAGAAGAAAA+AGG + chr1.4:78441790-78441809 MS.gene41424:intron 35.0%
GGGTAGGTTTAAAGAAATCA+AGG - chr1.4:78440908-78440927 None:intergenic 35.0%
TCACTTATAAACTCGTGTTC+AGG - chr1.4:78441058-78441077 None:intergenic 35.0%
TCTACATCCTATAAACTGGT+AGG + chr1.4:78442375-78442394 MS.gene41424:intron 35.0%
TGAAGATATCACAAAAAGGC+GGG + chr1.4:78442504-78442523 MS.gene41424:intron 35.0%
TGCTACAATGTTCAAGATTG+TGG + chr1.4:78441986-78442005 MS.gene41424:intron 35.0%
TTAATGCATGTTTGGATGCA+CGG - chr1.4:78440935-78440954 None:intergenic 35.0%
! TTTTCTCAGTTTCCATTTCC+TGG + chr1.4:78440743-78440762 MS.gene41424:intron 35.0%
!! ACTGATAAAACCGGTTTGTA+AGG - chr1.4:78441093-78441112 None:intergenic 35.0%
!! ATTACAAGTGTTGGAGAGTT+AGG - chr1.4:78439700-78439719 None:intergenic 35.0%
!! CGGTTTTATCAGTTTGAGTT+CGG + chr1.4:78441100-78441119 MS.gene41424:intron 35.0%
!! TTACAAGTGTTGGAGAGTTA+GGG - chr1.4:78439699-78439718 None:intergenic 35.0%
AAGAGGTAGCTGCAAAATAC+AGG + chr1.4:78441921-78441940 MS.gene41424:CDS 40.0%
AAGATATCACAAAAAGGCGG+GGG + chr1.4:78442506-78442525 MS.gene41424:intron 40.0%
ACAGCTCCAAAGAAACTCTT+TGG + chr1.4:78441953-78441972 MS.gene41424:CDS 40.0%
ACTAAAAGTCTTAGCTGGGT+GGG - chr1.4:78439603-78439622 None:intergenic 40.0%
AGAGGTAGCTGCAAAATACA+GGG + chr1.4:78441922-78441941 MS.gene41424:CDS 40.0%
ATGTTTGGATGCACGGTATT+GGG - chr1.4:78440928-78440947 None:intergenic 40.0%
CAAAATAGCAGCACTTCACA+AGG + chr1.4:78441838-78441857 MS.gene41424:CDS 40.0%
CAAGAGTTGCAACAGAAAAG+AGG + chr1.4:78441408-78441427 MS.gene41424:CDS 40.0%
GAAGATATCACAAAAAGGCG+GGG + chr1.4:78442505-78442524 MS.gene41424:intron 40.0%
GAGTCAGTGGTCTAATACAA+AGG - chr1.4:78442190-78442209 None:intergenic 40.0%
GCTATGATTGAGGCAAAGAA+AGG + chr1.4:78441878-78441897 MS.gene41424:CDS 40.0%
GCTGAAGAGAAACCAAAAGA+GGG + chr1.4:78441268-78441287 MS.gene41424:CDS 40.0%
GCTGTCACTAATCAAAGCAT+GGG + chr1.4:78441430-78441449 MS.gene41424:CDS 40.0%
GGAGGAGGATTATTATCTTG+TGG - chr1.4:78439993-78440012 None:intergenic 40.0%
GTCCTATTGAGTTTCCTGAA+GGG + chr1.4:78440579-78440598 MS.gene41424:intron 40.0%
TACTAAAAGTCTTAGCTGGG+TGG - chr1.4:78439604-78439623 None:intergenic 40.0%
TCCAAAGAAAGATGTAGCTG+AGG + chr1.4:78439953-78439972 MS.gene41424:CDS 40.0%
TCCATGTTTAGAGGGGAAAA+GGG - chr1.4:78442433-78442452 None:intergenic 40.0%
TCCTATTGAGTTTCCTGAAG+GGG + chr1.4:78440580-78440599 MS.gene41424:intron 40.0%
TCCTCAGCTACATCTTTCTT+TGG - chr1.4:78439957-78439976 None:intergenic 40.0%
TCTAAGAATGAGTGAGTCAG+TGG - chr1.4:78442203-78442222 None:intergenic 40.0%
TGCTGAAGAGAAACCAAAAG+AGG + chr1.4:78441267-78441286 MS.gene41424:CDS 40.0%
TGTCCTATTGAGTTTCCTGA+AGG + chr1.4:78440578-78440597 MS.gene41424:intron 40.0%
TTTGGAAGTCAGCTATATGG+TGG + chr1.4:78442465-78442484 MS.gene41424:intron 40.0%
! ACCATATAGCTGACTTCCAA+AGG - chr1.4:78442466-78442485 None:intergenic 40.0%
! ACCTTTGGAAGTCAGCTATA+TGG + chr1.4:78442462-78442481 MS.gene41424:intron 40.0%
! ATAGCTGACTTCCAAAGGTA+AGG - chr1.4:78442461-78442480 None:intergenic 40.0%
!! TAAAACCGGTTTGTAAGGTG+AGG - chr1.4:78441088-78441107 None:intergenic 40.0%
!! TGGTCTTGTAATCAGTGCAT+TGG + chr1.4:78441032-78441051 MS.gene41424:intron 40.0%
AAGGTGAGGTCCATGTTTAG+AGG - chr1.4:78442442-78442461 None:intergenic 45.0%
ACTGTTCTCCCATGCTGTTA+TGG - chr1.4:78441646-78441665 None:intergenic 45.0%
AGATATCACAAAAAGGCGGG+GGG + chr1.4:78442507-78442526 MS.gene41424:intron 45.0%
AGGTGAGGTCCATGTTTAGA+GGG - chr1.4:78442441-78442460 None:intergenic 45.0%
ATGTTTAGAGGGGAAAAGGG+TGG - chr1.4:78442430-78442449 None:intergenic 45.0%
ATTATACGCGGTCGATGTGA+AGG - chr1.4:78441193-78441212 None:intergenic 45.0%
CAAGGCAGCTGAAGAAAAGA+AGG + chr1.4:78441856-78441875 MS.gene41424:CDS 45.0%
CATGTTTGGATGCACGGTAT+TGG - chr1.4:78440929-78440948 None:intergenic 45.0%
CCTATTGAGTTTCCTGAAGG+GGG + chr1.4:78440581-78440600 MS.gene41424:intron 45.0%
CGAATCCTCACCTTACAAAC+CGG + chr1.4:78441080-78441099 MS.gene41424:intron 45.0%
CTATTGAGTTTCCTGAAGGG+GGG + chr1.4:78440582-78440601 MS.gene41424:intron 45.0%
CTGAGCTATGACAAGAGCTT+TGG - chr1.4:78440036-78440055 None:intergenic 45.0%
GAAAAGGGTGGACAGAGAAA+TGG - chr1.4:78442418-78442437 None:intergenic 45.0%
GAAGAGAAACCAAAAGAGGG+CGG + chr1.4:78441271-78441290 MS.gene41424:CDS 45.0%
GGCTGTCACTAATCAAAGCA+TGG + chr1.4:78441429-78441448 MS.gene41424:CDS 45.0%
GTCCATGTTTAGAGGGGAAA+AGG - chr1.4:78442434-78442453 None:intergenic 45.0%
TATTGAGTTTCCTGAAGGGG+GGG + chr1.4:78440583-78440602 MS.gene41424:intron 45.0%
TGACTTCCAAAGGTAAGGTG+AGG - chr1.4:78442456-78442475 None:intergenic 45.0%
TGGTAGGTACTCTTGTGAGT+TGG - chr1.4:78439575-78439594 None:intergenic 45.0%
TTGGAGTCATCAACAACAGG+AGG - chr1.4:78440017-78440036 None:intergenic 45.0%
! ACCCTTTTCCCCTCTAAACA+TGG + chr1.4:78442429-78442448 MS.gene41424:CDS 45.0%
! TCTTAGCTGGGTGGGTTTAT+TGG - chr1.4:78439595-78439614 None:intergenic 45.0%
!! AAGTGTTGGAGAGTTAGGGT+TGG - chr1.4:78439695-78439714 None:intergenic 45.0%
!! ACATCTTTCTTTGGAGCCTC+AGG - chr1.4:78439948-78439967 None:intergenic 45.0%
!! CATCTTTCTTTGGAGCCTCA+GGG - chr1.4:78439947-78439966 None:intergenic 45.0%
!! GCTTTGGAGTCATCAACAAC+AGG - chr1.4:78440020-78440039 None:intergenic 45.0%
ATATCACAAAAAGGCGGGGG+GGG + chr1.4:78442509-78442528 MS.gene41424:intron 50.0%
ATTGAGTTTCCTGAAGGGGG+GGG + chr1.4:78440584-78440603 MS.gene41424:intron 50.0%
CATGGACCTCACCTTACCTT+TGG + chr1.4:78442447-78442466 MS.gene41424:CDS 50.0%
CCCCCTTCAGGAAACTCAAT+AGG - chr1.4:78440584-78440603 None:intergenic 50.0%
GAGTCATCAACAACAGGAGG+AGG - chr1.4:78440014-78440033 None:intergenic 50.0%
GATATCACAAAAAGGCGGGG+GGG + chr1.4:78442508-78442527 MS.gene41424:intron 50.0%
GCTGCAAAATACAGGGCAAC+TGG + chr1.4:78441929-78441948 MS.gene41424:CDS 50.0%
GGTGAGGTCCATGTTTAGAG+GGG - chr1.4:78442440-78442459 None:intergenic 50.0%
GTAGTCGTCTCAGTTGAAGC+AGG - chr1.4:78439903-78439922 None:intergenic 50.0%
TCATCAACAACAGGAGGAGG+AGG - chr1.4:78440011-78440030 None:intergenic 50.0%
! AGCTGGGTGGGTTTATTGGT+AGG - chr1.4:78439591-78439610 None:intergenic 50.0%
! TTGGATGCACGGTATTGGGT+AGG - chr1.4:78440924-78440943 None:intergenic 50.0%
AGTTGGCACAGCGCACCAAT+AGG - chr1.4:78439558-78439577 None:intergenic 55.0%
GTCGTCTCAGTTGAAGCAGG+TGG - chr1.4:78439900-78439919 None:intergenic 55.0%
GTCTCAGTTGAAGCAGGTGG+TGG - chr1.4:78439897-78439916 None:intergenic 55.0%
GTTGGCACAGCGCACCAATA+GGG - chr1.4:78439557-78439576 None:intergenic 55.0%
TATCACAAAAAGGCGGGGGG+GGG + chr1.4:78442510-78442529 MS.gene41424:intron 55.0%
TCAACAACAGGAGGAGGAGG+AGG - chr1.4:78440008-78440027 None:intergenic 55.0%
TTGAGTTTCCTGAAGGGGGG+GGG + chr1.4:78440585-78440604 MS.gene41424:intron 55.0%
! TCAGTTGAAGCAGGTGGTGG+TGG - chr1.4:78439894-78439913 None:intergenic 55.0%
! TCGATAGAGCCGCCCTCTTT+TGG - chr1.4:78441283-78441302 None:intergenic 55.0%
!! TTCTTTGGAGCCTCAGGGAG+AGG - chr1.4:78439942-78439961 None:intergenic 55.0%
ATCACAAAAAGGCGGGGGGG+GGG + chr1.4:78442511-78442530 MS.gene41424:intron 60.0%
CCTCAGGGAGAGGAGGAGAA+GGG - chr1.4:78439932-78439951 None:intergenic 60.0%
CTCAGGGAGAGGAGGAGAAG+GGG - chr1.4:78439931-78439950 None:intergenic 60.0%
TGAGTTTCCTGAAGGGGGGG+GGG + chr1.4:78440586-78440605 MS.gene41424:intron 60.0%
! TTTGGAGCCTCAGGGAGAGG+AGG - chr1.4:78439939-78439958 None:intergenic 60.0%
!! GTTGAAGCAGGTGGTGGTGG+AGG - chr1.4:78439891-78439910 None:intergenic 60.0%
AGTTTCCTGAAGGGGGGGGG+GGG + chr1.4:78440588-78440607 MS.gene41424:intron 65.0%
CCCTTCTCCTCCTCTCCCTG+AGG + chr1.4:78439929-78439948 MS.gene41424:CDS 65.0%
GAGTTTCCTGAAGGGGGGGG+GGG + chr1.4:78440587-78440606 MS.gene41424:intron 65.0%
GCCTCAGGGAGAGGAGGAGA+AGG - chr1.4:78439933-78439952 None:intergenic 65.0%
TCACAAAAAGGCGGGGGGGG+GGG + chr1.4:78442512-78442531 MS.gene41424:intron 65.0%
ACAAAAAGGCGGGGGGGGGG+GGG + chr1.4:78442514-78442533 MS.gene41424:intron 70.0%
CACAAAAAGGCGGGGGGGGG+GGG + chr1.4:78442513-78442532 MS.gene41424:intron 70.0%
GAGGGCGGCTCTATCGACCG+TGG + chr1.4:78441286-78441305 MS.gene41424:CDS 70.0%
GTTTCCTGAAGGGGGGGGGG+GGG + chr1.4:78440589-78440608 MS.gene41424:intron 70.0%
TTTCCTGAAGGGGGGGGGGG+GGG + chr1.4:78440590-78440609 MS.gene41424:intron 70.0%
AAAAAGGCGGGGGGGGGGGG+GGG + chr1.4:78442516-78442535 MS.gene41424:intron 75.0%
CAAAAAGGCGGGGGGGGGGG+GGG + chr1.4:78442515-78442534 MS.gene41424:intron 75.0%
TTCCTGAAGGGGGGGGGGGG+GGG + chr1.4:78440591-78440610 MS.gene41424:intron 75.0%
! AAAAGGCGGGGGGGGGGGGG+GGG + chr1.4:78442517-78442536 MS.gene41424:intron 80.0%
! TCCTGAAGGGGGGGGGGGGG+GGG + chr1.4:78440592-78440611 MS.gene41424:intron 80.0%
! AAAGGCGGGGGGGGGGGGGG+GGG + chr1.4:78442518-78442537 MS.gene41424:intron 85.0%
! CCTGAAGGGGGGGGGGGGGG+GGG + chr1.4:78440593-78440612 MS.gene41424:intron 85.0%
! CTGAAGGGGGGGGGGGGGGG+GGG + chr1.4:78440594-78440613 MS.gene41424:intron 85.0%
! TGAAGGGGGGGGGGGGGGGG+GGG + chr1.4:78440595-78440614 MS.gene41424:intron 85.0%
! AAGGCGGGGGGGGGGGGGGG+GGG + chr1.4:78442519-78442538 MS.gene41424:intron 90.0%
! AAGGGGGGGGGGGGGGGGGG+GGG + chr1.4:78440597-78440616 MS.gene41424:intron 90.0%
! CCCCCCCCCCCCCCCCCTTC+AGG - chr1.4:78440596-78440615 None:intergenic 90.0%
! GAAGGGGGGGGGGGGGGGGG+GGG + chr1.4:78440596-78440615 MS.gene41424:intron 90.0%
! AGGCGGGGGGGGGGGGGGGG+GGG + chr1.4:78442520-78442539 MS.gene41424:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr1.4:78440598-78440617 MS.gene41424:intron 95.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 78439534 78445813 78439534 ID=MS.gene41424
chr1.4 mRNA 78439534 78445813 78439534 ID=MS.gene41424.t1;Parent=MS.gene41424
chr1.4 exon 78439534 78439584 78439534 ID=MS.gene41424.t1.exon1;Parent=MS.gene41424.t1
chr1.4 CDS 78439534 78439584 78439534 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78439915 78440056 78439915 ID=MS.gene41424.t1.exon2;Parent=MS.gene41424.t1
chr1.4 CDS 78439915 78440056 78439915 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78441254 78441307 78441254 ID=MS.gene41424.t1.exon3;Parent=MS.gene41424.t1
chr1.4 CDS 78441254 78441307 78441254 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78441396 78441483 78441396 ID=MS.gene41424.t1.exon4;Parent=MS.gene41424.t1
chr1.4 CDS 78441396 78441483 78441396 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78441623 78441704 78441623 ID=MS.gene41424.t1.exon5;Parent=MS.gene41424.t1
chr1.4 CDS 78441623 78441704 78441623 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78441791 78441974 78441791 ID=MS.gene41424.t1.exon6;Parent=MS.gene41424.t1
chr1.4 CDS 78441791 78441974 78441791 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78442397 78442471 78442397 ID=MS.gene41424.t1.exon7;Parent=MS.gene41424.t1
chr1.4 CDS 78442397 78442471 78442397 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78443168 78443221 78443168 ID=MS.gene41424.t1.exon8;Parent=MS.gene41424.t1
chr1.4 CDS 78443168 78443221 78443168 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78443310 78443397 78443310 ID=MS.gene41424.t1.exon9;Parent=MS.gene41424.t1
chr1.4 CDS 78443310 78443397 78443310 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78443537 78443618 78443537 ID=MS.gene41424.t1.exon10;Parent=MS.gene41424.t1
chr1.4 CDS 78443537 78443618 78443537 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78443705 78443888 78443705 ID=MS.gene41424.t1.exon11;Parent=MS.gene41424.t1
chr1.4 CDS 78443705 78443888 78443705 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78444311 78444385 78444311 ID=MS.gene41424.t1.exon12;Parent=MS.gene41424.t1
chr1.4 CDS 78444311 78444385 78444311 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78445082 78445135 78445082 ID=MS.gene41424.t1.exon13;Parent=MS.gene41424.t1
chr1.4 CDS 78445082 78445135 78445082 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78445224 78445311 78445224 ID=MS.gene41424.t1.exon14;Parent=MS.gene41424.t1
chr1.4 CDS 78445224 78445311 78445224 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78445451 78445532 78445451 ID=MS.gene41424.t1.exon15;Parent=MS.gene41424.t1
chr1.4 CDS 78445451 78445532 78445451 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
chr1.4 exon 78445619 78445813 78445619 ID=MS.gene41424.t1.exon16;Parent=MS.gene41424.t1
chr1.4 CDS 78445619 78445813 78445619 ID=cds.MS.gene41424.t1;Parent=MS.gene41424.t1
Gene Sequence

>MS.gene41424

ATGTATAATAAGTTGTCTGTCCCTATTGGTGCGCTGTGCCAACTCACAAGAGTACCTACCAATAAACCCACCCAGCTAAGACTTTTAGTAGAATTTTGAAGTTATTATTATTATTGTAGTAACAGTTACCCTTTCATTCTACAACTATAATATCTCAACCAACCCTAACTCTCCAACACTTGTAATATCTTTCTTATCTCAATTTTACTTACTTTGTTGAATTATATTCGTGTGTTCTGTTACAACAAACACCAAAAAAGTTGTTCCAATTCTTCTTTCTTAGAAAGAGAAAGAAAACAAAAAATGACAGATCAAGAGCAACCAAAAAAGATAGAATCTGAATCAACATCGAATCCTCCACCACCACCTGCTTCAACTGAGACGACTACTACTACCCCTTCTCCTCCTCTCCCTGAGGCTCCAAAGAAAGATGTAGCTGAGGAGAAAGCTGTAATTCCACAAGATAATAATCCTCCTCCTCCTCCTGTTGTTGATGACTCCAAAGCTCTTGTCATAGCTCAGAGTATGACACTAAAATATAAACATATTCTTCTAAATTTATGTGTTTAAATTTTATTTTATTGGTTGCCAAGGAAACAATTTTATTATAGAAAAAAGGTGTCAGTTCTTATGTTCTATGTTTTATCTATCTATTTTGGTTTGTTTTATTGGACTGGTATAAGGTGACGACTTTAAATTTTATTACTGTGTAATTTTCCATCTTCAAATTTTCCCTATAATTGATTTTTTTCAAAGACTAGTTTACATGAGTAAAAAAAAAAATATCAATACATATTTTTTATCTGGTGTAGTTCTAGTTTCTATACATATAAGCGAAATAGTTGAGAGGTGACACTTGTTTAAAAAAAAAAATCTGCAGTTTTAATAGCAAAATTGAATTGAAGGTCTAAAATTTGTTTTTCTTTGTCTTATAGTCTCTGTTTTCTTAATAATTTAAACAATTTTTGTGTGTAAATTATTACTTTTAATAGAAGGGATGTTTTTATCTTTCTTTCTTTCTTCTTTACAGAAAAAGTTAATACTTGTCCTATTGAGTTTCCTGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTATTGAAATTGAAAGTTTTAACAAAGAAAAGTCAAAACTCATTATTTACTAATCAAGTTTTATGCTAGTTTTGACATACTTGATTATTTTATGTTGTGTTCCCTTGTATTTTTCTCAGTTTCCATTTCCTGGAATTTTTCTGATGATTGTTCTCTTAGGAAGATTTATATTTTCAAGTTGCTATGTTTACCAATTACCATCCAACTACAATCTAATCAATTAAGTGTATGGTTAAATTGACAAGTGAATTTAATATAATTACGATGTGTCACCTTGATTTCTTTAAACCTACCCAATACCGTGCATCCAAACATGCATTAAGATTCTAGGGAAGATAGAATTTTTGCATATTGAAGCCAAAAATATGCACAAATTTAAAGAAAAGAAACACATTAGCTTGGTCTTGTAATCAGTGCATTGGCCTGAACACGAGTTTATAAGTGAGACGAATCCTCACCTTACAAACCGGTTTTATCAGTTTGAGTTCGGCCCAAAATAACCTTTACCGTTTTCATGTTTTAGGAACCATTCATCCGTAATATTTGTTTTTAAGTCACCTTCACATCGACCGCGTATAATCACATTGATATAATTCTGTTGTTAATTTGGTTTACTATCAGAGACTGATGAAGTTGCTGAAGAGAAACCAAAAGAGGGCGGCTCTATCGACCGTGGTATATATCTTGTCATTGTGACACTCAATTTCCCTTTATGCACTTCATATGCTAACATTACAGGTTATGACATTTCATTCTTGTTCAGATGCTGTGCTTACAAGAGTTGCAACAGAAAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGTAAGAGCTTGCACCATCTAATGCTTAATGTGTATTTTTGGTTTCTTCAAATTTTTAGAACCTTATTACATTGAGTCACCATAATTCTAAGGAGATTAGTAACAAGTTTGTATTAAATTGAAATGAATTTGATGAGCAGAGCTCAGAGAAAACTTTCATCCATAACAGCATGGGAGAACAGTAAGAAAGCTGCTAAAGAAGCTGAATTGAGAAAACTTGAGGTAAGAACTTCTGTATATTTAATTATAACATTGAATGTGACAAAATATGGGGGAACAATTAACTTTAATTACTTTTCACTGTGTAGGAACAACTAGAGAAGAAAAAGGGAGAATATGCTGAGAAAATGAAAAACAAAATAGCAGCACTTCACAAGGCAGCTGAAGAAAAGAAGGCTATGATTGAGGCAAAGAAAGGTGAAGAATTACTCAAAGCAGAAGAGGTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTCTTTTCTAATGCTACAATGTTCAAGATTGTGGTCAACAAAATATGATGTGTTATTATTACTATGTGTTTTCTTCATGTGTGATTTGGTGTCTTTTTAGTTTATGTTAATTTATTCTGTGTGCATAGTGATATATATTTGCTTGTTGTATATATCCATTACTTTGGGAATAAAAACCATTTAATTCTCATTCAATTTGTGCAATATAAAGTCCTTTGTATTAGACCACTGACTCACTCATTCTTAGATGTTGGCAAATATAGAAACACCAATGAAAACACTTTGTGAATAACAAACACAGATCATCATGAAACCTGAGACATTATAATTACACATAATCAATAGTTGTTGAAGGACATGAACAAAATCATTAGTTGTTAATCCATTGATCTAACTATACTCTACATCCTATAAACTGGTAGGTAAACTTAAAACTCTAGCCATTTCTCTGTCCACCCTTTTCCCCTCTAAACATGGACCTCACCTTACCTTTGGAAGTCAGCTATATGGTGGATGCATTTTTCAAAAATGAAGATATCACAAAAAGGCGGGGGGGGGGGGGGGGGGGGGGGTTATTGAAATTGAAAGTTTTAACAAAGAAAAGTCAAAACTCATTATTTACTAATCAAGTTTTATGCTAGTTTTGACATACTTGATTATTTTATGTTGTGTTCCCTTGTATTTTTCTCAGTTTCCATTTCCTGGAATTTTTCTGATGATTGTTCTCTTAGGAAGATTTATATTTTCAAGTTGCTATGTTTACCAATTACCATCCAACTACAATCTAATCAATTAAGTGTATGGTTAAATTGACAAGTGAATTTAATATAATTACGATGTGTCACCTTGATTTCTTTAAACCTACCCAATACCGTGCATCCAAACATGCATTAAGATTCTAGGGAAGATAGAATTTTTGCATATTGAAGCCAAAAATATGCACAAATTTAAAGAAAAGAAACACATTAGCTTGGTCTTGTAATCAGTGCATTGGCCTGAACACGAGTTTATAAGTGAGACGAATCCTCACCTTACAAACCGGTTTTATCAGTTTGAGTTCGGCCCAAAATAACCTTTACCGTTTTCATGTTTTAGGAACCATTCATCCGTAATATTTGTTTTTAAGTCACCTTCACATCGACCGCGTATAATCACATTGATATAATTCTGTTGTTAATTTGGTTTACTATCAGAGACTGATGAAGTTGCTGAAGAGAAACCAAAAGAGGGCGGCTCTATCGACCGTGGTATATATCTTGTCATTGTGACACTCAATTTCCCTTTATGCACTTCATATGCTAACATTACAGGTTATGACATTTCATTCTTGTTCAGATGCTGTGCTTACAAGAGTTGCAACAGAAAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGTAAGAGCTTGCACCATCTAATGCTTAATGTGTATTTTTGGTTTCTTCAAATTTTTAGAACCTTATTACATTGAGTCACCATAATTCTAAGGAGATTAGTAACAAGTTTGTATTAAATTGAAATGAATTTGATGAGCAGAGCTCAGAGAAAACTTTCATCCATAACAGCATGGGAGAACAGTAAGAAAGCTGCTAAAGAAGCTGAATTGAGAAAACTTGAGGTAAGAACTTCTGTATATTTAATTATAACATTGAATGTGACAAAATATGGGGGAACAATTAACTTTAATTACTTTTCACTGTGTAGGAACAACTAGAGAAGAAAAAGGGAGAATATGCTGAGAAAATGAAAAACAAAATAGCAGCACTTCACAAGGCAGCTGAAGAAAAGAAGGCTATGATTGAGGCAAAGAAAGGTGAAGAATTACTCAAAGCAGAAGAGGTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTCTTTTCTAATGCTACAATGTTCAAGATTGTGGTCAACAAAATATGATGTGTTATTATTACTATGTGTTTTCTTCATGTGTGATTTGGTGTCTTTTTAGTTTATGTTAATTTATTCTGTGTGCATAGTGATATATATTTGCTTGTTGTATATATCCATTACTTTGGGAATAAAAACCATTTAATTCTCATTCAATTTGTGCAATATAAAGTCCTTTGTATTAGACCACTGACTCACTCATTCTTAGATGTTGGCAAATATAGAAACACCAATGAAAACACTTTGTGAATAACAAACACAGATCATCATGAAACCTGAGACATTATAATTACACATAATCAATAGTTGTTGAAGGACATGAACAAAATCATTAGTTGTTAATCCATTGATCTAACTATACTCTACATCCTATAAACTGGTAGGTAAACTTAAAACTCTAGCCATTTCTCTGTCCACCCTTTTCCCCTCTAAACATGGACCTCACCTTACCTTTGGAAGTCAGCTATATGGTGGATGCATTTTTCAAAAATGAAGATATCACAAAAAGGCGGGGGGGGGGGGGGGGGGGGGGGTTATTGAAATTGAAAGTTTTAACAAAGAAAAGTCAAAACTCATTATTTACTAATCAAGTTTTATGCTAGTTTTGACATACTTGATTATTTTATGTTGTGTTCCCTTGTATTTTTCTCAGTTTCCATTTCCTGGAATTTTTCTGATGATTGTTCTCTTAGGAAGATTTATATTTTCAAGTTGCTATGTTTACCAATTACCATCCAACTACAATCTAATCAATTAAGTGTATGGTTAAATTGACAAGTGAATTTAATATAATTACGATGTGTCACCTTGATTTCTTTAAACCTACCCAATACCGTGCATCCAAACATGCATTAAGATTCTAGGGAAGATAGAATTTTTGCATATTGAAGCCAAAAATATGCACAAATTTAAAGAAAAGAAACACATTAGCTTGGTCTTGTAATCAGTGCATTGGCCTGAACACGAGTTTATAAGTGAGACGAATCCTCACCTTACAAACCGGTTTTATCAGTTTGAGTTCGGCCCAAAATAACCTTTACCGTTTTCATGTTTTAGGAACCATTCATCCGTAATATTTGTTTTTAAGTCACCTTCACATCGACCGCGTATAATCACATTGATATAATTCTGTTGTTAATTTGGTTTACTATCAGAGACTGATGAAGTTGCTGAAGAGAAACCAAAAGAGGGCGGCTCTATCGACCGTGGTATATATCTTGTCATTGTGACACTCAATTTCCCTTTATGCACTTCATATGCTAACATTACAGGTTATGACATTTCATTCTTGTTCAGATGCTGTGCTTACAAGAGTTGCAACAGAAAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAGAACAAGTAAGAGCTTGCACCATCTAATGCTTAATGTGTATTTTTGGTTTCTTCAAATTTTTAGAACCTTATTACATTGAGTCACCATAATTCTAAGGAGATTAGTAACAAGTTTGTATTAAATTGAAATGAATTTGATGAGCAGAGCTCAGAGAAAACTTTCATCCATAACAGCATGGGAGAACAGTAAGAAAGCTGCTAAAGAAGCTGAATTGAGAAAACTTGAGGTAAGAACTTCTGTATATTTAATTATAACATTGAATGTGACAAAATATGGGGGAACAATTAACTTTAATTACTTTTCACTGTGTAGGAACAACTAGAGAAGAAAAAGGGAGAATATGCTGAGAAAATGAAAAACAAAATAGCAGCACTTCACAAGGCAGCTGAAGAAAAGAAGGCTATGATTGAGGCAAAGAAAGGTGAAGAATTACTCAAAGCAGAAGAGGTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTCTTTTCTAA
Protein sequence

>MS.gene41424.t1

MYNKLSVPIGALCQLTRTTTTTPSPPLPEAPKKDVAEEKAVIPQDNNPPPPPVVDDSKALVIAQKTDEVAEEKPKEGGSIDRDAVLTRVATEKRLSLIKAWEESEKSKAENKAQRKLSSITAWENSKKAAKEAELRKLEEQLEKKKGEYAEKMKNKIAALHKAAEEKKAMIEAKKGEELLKAEEVAAKYRATGTAPKKLFGKLKTLAISLSTLFPSKHGPHLTFGKTDEVAEEKPKEGGSIDRDAVLTRVATEKRLSLIKAWEESEKSKAENKAQRKLSSITAWENSKKAAKEAELRKLEEQLEKKKGEYAEKMKNKIAALHKAAEEKKAMIEAKKGEELLKAEEVAAKYRATGTAPKKLFGKLKTLAISLSTLFPSKHGPHLTFGKTDEVAEEKPKEGGSIDRDAVLTRVATEKRLSLIKAWEESEKSKAENKAQRKLSSITAWENSKKAAKEAELRKLEEQLEKKKGEYAEKMKNKIAALHKAAEEKKAMIEAKKGEELLKAEEVAAKYRATGTAPKKLFGLF