Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053201.t1 | RHN58352.1 | 55 | 607 | 32 | 4 | 1 | 373 | 113 | 712 | 2.60E-159 | 571.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053201.t1 | Q9SWH5 | 51.1 | 137 | 67 | 0 | 232 | 368 | 422 | 558 | 2.8e-32 | 141.0 |
| MS.gene053201.t1 | Q9SWH5 | 37.4 | 123 | 45 | 3 | 139 | 231 | 93 | 213 | 9.8e-14 | 79.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053201.t1 | G7JEG8 | 55.0 | 607 | 32 | 4 | 1 | 373 | 1 | 600 | 1.9e-159 | 571.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene053201 | 0.815436 | 9.25E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene053201 | 0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene053201 | 0.807502 | 4.90E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene053201 | 0.846237 | 2.46E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene053201 | 0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene053201 | 0.810573 | 1.08E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene053201 | 0.841404 | 4.85E-58 | -1.69E-46 |
| MS.gene053166 | MS.gene053201 | 0.823393 | 1.42E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene05414 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene05415 | 0.848442 | 6.11E-60 | -1.69E-46 |
| MS.gene053201 | MS.gene054405 | 0.805165 | 1.52E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene054468 | 0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene054559 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene055227 | 0.821765 | 3.39E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene055356 | 0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene055608 | 0.808912 | 2.45E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene055701 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene055818 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene056173 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene056506 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene057194 | 0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene057444 | 0.812319 | 4.50E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene058010 | 0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene058979 | 0.822178 | 2.72E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene059272 | 0.801671 | 8.07E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene060011 | 0.81415 | 1.78E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene060167 | 0.814763 | 1.31E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene060322 | 0.824455 | 8.00E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene06052 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene060998 | 0.801829 | 7.49E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene061333 | 0.812867 | 3.42E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene061343 | 0.812735 | 3.65E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene06269 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene065039 | 0.82069 | 6.00E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene065347 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene06564 | 0.811424 | 7.05E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene065904 | 0.837867 | 4.04E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene066206 | 0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene066320 | 0.804029 | 2.63E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene066433 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene066680 | 0.800248 | 1.58E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene06697 | 0.806164 | 9.40E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene06698 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene067566 | 0.805486 | 1.30E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene068385 | 0.82838 | 9.28E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene068526 | 0.82007 | 8.33E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene068924 | 0.819936 | 8.94E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene069554 | 0.8409 | 6.58E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene069754 | 0.801443 | 8.98E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene069956 | 0.818657 | 1.75E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene070478 | 0.830654 | 2.60E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene070818 | 0.812141 | 4.92E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene071059 | 0.815709 | 8.05E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene071551 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene072098 | 0.815879 | 7.37E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene072397 | -0.854693 | 1.04E-61 | -1.69E-46 |
| MS.gene053201 | MS.gene073008 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene073016 | -0.80141 | 9.12E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene073139 | 0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene073460 | 0.821054 | 4.95E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene073753 | 0.813454 | 2.54E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene073853 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene074184 | -0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene09008 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene20809 | 0.81094 | 8.98E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene22144 | 0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene22731 | 0.808431 | 3.11E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene23055 | 0.835788 | 1.37E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene23190 | 0.809003 | 2.34E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene24067 | 0.83331 | 5.74E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene24908 | 0.802819 | 4.68E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene25151 | 0.808558 | 2.92E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene25978 | 0.813978 | 1.95E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene29086 | 0.833871 | 4.16E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene30930 | 0.802345 | 5.86E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene30970 | 0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene31142 | 0.814101 | 1.83E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene31231 | 0.818777 | 1.64E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene31283 | 0.833535 | 5.04E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene32262 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene32361 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene32874 | 0.841629 | 4.23E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene33127 | -0.801747 | 7.78E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene33624 | 0.822463 | 2.34E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene34667 | 0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene35408 | 0.840836 | 6.84E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene35611 | 0.804614 | 1.99E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene35631 | 0.803614 | 3.21E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene35823 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene35824 | 0.809533 | 1.81E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene35864 | 0.80471 | 1.90E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene35967 | 0.814571 | 1.44E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene37086 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene37612 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene38381 | 0.817687 | 2.90E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene39666 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene41121 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene41424 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene43040 | 0.816154 | 6.40E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene43459 | 0.817447 | 3.28E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene43906 | 0.806133 | 9.54E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene43973 | 0.809627 | 1.72E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene44364 | 0.805688 | 1.18E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene44461 | 0.817386 | 3.39E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene44603 | 0.815925 | 7.20E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene45090 | 0.819106 | 1.38E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene45422 | 0.827666 | 1.38E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene45507 | 0.80667 | 7.35E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene46132 | 0.82158 | 3.74E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene46134 | 0.801201 | 1.01E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene51511 | 0.809383 | 1.94E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene52059 | 0.839794 | 1.28E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene52061 | 0.833139 | 6.33E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene52357 | 0.806197 | 9.25E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene52525 | 0.81996 | 8.83E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene53064 | 0.818323 | 2.08E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene53156 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene53586 | 0.836499 | 9.03E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene53875 | -0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene54507 | 0.806826 | 6.81E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene54512 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene55357 | 0.808752 | 2.65E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene55717 | 0.821232 | 4.51E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene55718 | 0.838366 | 3.00E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene56431 | 0.823665 | 1.23E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene56537 | 0.827633 | 1.40E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene57469 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene58686 | 0.83892 | 2.16E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene59282 | 0.825576 | 4.35E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene59336 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene59840 | 0.809833 | 1.56E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene60204 | 0.805475 | 1.31E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene60206 | 0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene61139 | 0.812655 | 3.80E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene61388 | 0.802274 | 6.06E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene62250 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene63030 | 0.821102 | 4.83E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene63984 | 0.81883 | 1.60E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene64249 | 0.844011 | 9.85E-59 | -1.69E-46 |
| MS.gene053201 | MS.gene64567 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene65402 | 0.849784 | 2.59E-60 | -1.69E-46 |
| MS.gene053201 | MS.gene66414 | 0.808209 | 3.47E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene67220 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene68333 | 0.841717 | 4.01E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene69794 | 0.833085 | 6.53E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene70534 | 0.819715 | 1.00E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene72268 | 0.840924 | 6.49E-58 | -1.69E-46 |
| MS.gene053201 | MS.gene73820 | 0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene74367 | 0.822033 | 2.94E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene75184 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene75490 | 0.820225 | 7.67E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene75619 | -0.805401 | 1.36E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene76356 | 0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene76750 | 0.801564 | 8.49E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene77015 | 0.804958 | 1.68E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene77220 | 0.817338 | 3.47E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene77781 | 0.810455 | 1.14E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene78234 | 0.802912 | 4.48E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene79024 | 0.822644 | 2.12E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene79285 | 0.804382 | 2.22E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene80355 | 0.835083 | 2.06E-56 | -1.69E-46 |
| MS.gene053201 | MS.gene80877 | 0.803193 | 3.92E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene81466 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene81588 | 0.807819 | 4.20E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene82259 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene83623 | 0.807641 | 4.58E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene84326 | 0.83815 | 3.41E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene84931 | 0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene053201 | MS.gene84994 | 0.820858 | 5.49E-53 | -1.69E-46 |
| MS.gene053201 | MS.gene85149 | -0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene86434 | 0.805052 | 1.61E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene87515 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene87669 | 0.813688 | 2.25E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene88091 | 0.803034 | 4.23E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene89344 | 0.814853 | 1.25E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene90022 | 0.81602 | 6.86E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene91005 | 0.815751 | 7.87E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene91676 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene91809 | 0.809333 | 1.99E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene92238 | 0.818778 | 1.64E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene93041 | 0.82933 | 5.47E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene93336 | 0.807304 | 5.40E-50 | -1.69E-46 |
| MS.gene053201 | MS.gene93654 | 0.830729 | 2.49E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene93656 | 0.812186 | 4.81E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene93688 | 0.839257 | 1.77E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene93764 | 0.81079 | 9.68E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene94420 | 0.817192 | 3.75E-52 | -1.69E-46 |
| MS.gene053201 | MS.gene95377 | 0.825593 | 4.31E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene96791 | 0.813289 | 2.76E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene97157 | 0.80447 | 2.13E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene98087 | 0.827023 | 1.97E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene98088 | 0.829067 | 6.33E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene98325 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene98611 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene98612 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene99702 | 0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene99746 | 0.831383 | 1.72E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene99802 | 0.81154 | 6.65E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene99820 | 0.814412 | 1.56E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053201.t1 | MTR_4g007220 | 75.769 | 260 | 26 | 3 | 1 | 230 | 1 | 253 | 2.12e-128 | 381 |
| MS.gene053201.t1 | MTR_4g007220 | 95.804 | 143 | 6 | 0 | 231 | 373 | 458 | 600 | 1.67e-97 | 302 |
| MS.gene053201.t1 | MTR_2g020730 | 70.714 | 140 | 36 | 2 | 230 | 368 | 439 | 574 | 6.01e-63 | 211 |
| MS.gene053201.t1 | MTR_2g020730 | 39.764 | 254 | 91 | 9 | 14 | 230 | 4 | 232 | 5.00e-36 | 138 |
| MS.gene053201.t1 | MTR_1g090430 | 60.993 | 141 | 55 | 0 | 231 | 371 | 347 | 487 | 2.16e-57 | 194 |
| MS.gene053201.t1 | MTR_1g090430 | 38.971 | 136 | 49 | 3 | 124 | 228 | 5 | 137 | 1.94e-19 | 90.1 |
| MS.gene053201.t1 | MTR_8g099865 | 50.000 | 138 | 69 | 0 | 231 | 368 | 444 | 581 | 4.59e-41 | 152 |
| MS.gene053201.t1 | MTR_8g099865 | 31.579 | 247 | 122 | 7 | 16 | 228 | 3 | 236 | 3.21e-24 | 104 |
| MS.gene053201.t1 | MTR_4g108780 | 48.201 | 139 | 72 | 0 | 232 | 370 | 435 | 573 | 1.33e-36 | 140 |
| MS.gene053201.t1 | MTR_3g037560 | 48.921 | 139 | 71 | 0 | 232 | 370 | 397 | 535 | 3.76e-36 | 138 |
| MS.gene053201.t1 | MTR_3g037560 | 36.735 | 147 | 56 | 5 | 107 | 223 | 41 | 180 | 2.66e-17 | 83.6 |
| MS.gene053201.t1 | MTR_4g007380 | 59.596 | 99 | 24 | 2 | 231 | 329 | 20 | 102 | 5.52e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053201.t1 | AT2G03220 | 51.095 | 137 | 67 | 0 | 232 | 368 | 422 | 558 | 7.98e-38 | 143 |
| MS.gene053201.t1 | AT2G03220 | 38.333 | 120 | 42 | 3 | 139 | 228 | 93 | 210 | 5.80e-17 | 82.8 |
| MS.gene053201.t1 | AT1G14110 | 45.455 | 154 | 80 | 1 | 215 | 368 | 319 | 468 | 6.51e-36 | 137 |
| MS.gene053201.t1 | AT1G14110 | 37.607 | 117 | 43 | 2 | 141 | 228 | 46 | 161 | 2.85e-17 | 83.6 |
| MS.gene053201.t1 | AT2G03210 | 47.143 | 140 | 74 | 0 | 232 | 371 | 400 | 539 | 6.42e-34 | 132 |
| MS.gene053201.t1 | AT2G03210 | 47.143 | 140 | 74 | 0 | 232 | 371 | 431 | 570 | 7.39e-34 | 132 |
| MS.gene053201.t1 | AT2G03210 | 47.143 | 140 | 74 | 0 | 232 | 371 | 434 | 573 | 8.26e-34 | 132 |
| MS.gene053201.t1 | AT2G15350 | 45.070 | 142 | 77 | 1 | 231 | 371 | 373 | 514 | 8.26e-34 | 131 |
| MS.gene053201.t1 | AT2G15350 | 30.000 | 120 | 52 | 2 | 141 | 228 | 42 | 161 | 3.14e-13 | 71.2 |
| MS.gene053201.t1 | AT2G15370 | 42.958 | 142 | 80 | 1 | 231 | 371 | 392 | 533 | 2.97e-32 | 127 |
| MS.gene053201.t1 | AT2G15370 | 31.933 | 119 | 49 | 2 | 141 | 228 | 61 | 178 | 1.74e-13 | 72.0 |
| MS.gene053201.t1 | AT1G14080 | 42.958 | 142 | 80 | 1 | 231 | 371 | 396 | 537 | 4.35e-31 | 124 |
| MS.gene053201.t1 | AT2G15390 | 42.958 | 142 | 79 | 2 | 231 | 371 | 395 | 535 | 6.52e-31 | 123 |
| MS.gene053201.t1 | AT2G15390 | 29.577 | 142 | 64 | 3 | 120 | 228 | 45 | 183 | 2.05e-14 | 75.1 |
| MS.gene053201.t1 | AT2G15390 | 42.958 | 142 | 79 | 2 | 231 | 371 | 363 | 503 | 7.83e-31 | 123 |
| MS.gene053201.t1 | AT2G15390 | 31.148 | 122 | 51 | 2 | 140 | 228 | 30 | 151 | 2.69e-14 | 74.7 |
| MS.gene053201.t1 | AT1G14100 | 43.478 | 138 | 74 | 2 | 231 | 368 | 380 | 513 | 1.17e-29 | 120 |
| MS.gene053201.t1 | AT1G74420 | 41.818 | 110 | 63 | 1 | 232 | 340 | 410 | 519 | 5.40e-19 | 89.0 |
| MS.gene053201.t1 | AT1G74420 | 44.444 | 72 | 39 | 1 | 158 | 228 | 140 | 211 | 7.41e-13 | 70.1 |
| MS.gene053201.t1 | AT1G74420 | 41.818 | 110 | 63 | 1 | 232 | 340 | 414 | 523 | 5.50e-19 | 89.0 |
| MS.gene053201.t1 | AT1G74420 | 45.714 | 70 | 37 | 1 | 160 | 228 | 146 | 215 | 7.06e-13 | 70.1 |
| MS.gene053201.t1 | AT1G74420 | 41.818 | 110 | 63 | 1 | 232 | 340 | 452 | 561 | 7.92e-19 | 88.6 |
| MS.gene053201.t1 | AT1G74420 | 44.444 | 72 | 39 | 1 | 158 | 228 | 182 | 253 | 8.22e-13 | 70.1 |
| MS.gene053201.t1 | AT1G74420 | 41.818 | 110 | 63 | 1 | 232 | 340 | 448 | 557 | 8.30e-19 | 88.2 |
| MS.gene053201.t1 | AT1G74420 | 44.444 | 72 | 39 | 1 | 158 | 228 | 178 | 249 | 9.19e-13 | 70.1 |
Find 64 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTGCAAATACCTTATT+TGG | 0.158644 | 4.2:-92461210 | MS.gene053201:CDS |
| TCTAAATTCTAAGAACATTA+AGG | 0.197873 | 4.2:-92461242 | MS.gene053201:CDS |
| ACTACTTCTTTGTCTACTTT+TGG | 0.201160 | 4.2:-92460284 | MS.gene053201:CDS |
| ACGAATAAATCAACTTCTTC+AGG | 0.252310 | 4.2:-92460425 | MS.gene053201:CDS |
| CTTGATGGACTCTTAGCTTC+TGG | 0.291465 | 4.2:-92461430 | MS.gene053201:CDS |
| TGGACACCGGCTAATGGTTT+AGG | 0.295799 | 4.2:-92461190 | MS.gene053201:CDS |
| TCAGATGGTGCCAACATAAA+AGG | 0.304553 | 4.2:-92462218 | MS.gene053201:CDS |
| CATTAGCCGGTGTCCAAATA+AGG | 0.310870 | 4.2:+92461197 | None:intergenic |
| TTGTGGTAATCCTTACCATT+AGG | 0.335624 | 4.2:+92461280 | None:intergenic |
| CTAAATTCTAAGAACATTAA+GGG | 0.340568 | 4.2:-92461241 | MS.gene053201:CDS |
| GTGTGATGCTTGTAAGATTC+AGG | 0.349633 | 4.2:-92461114 | MS.gene053201:CDS |
| CATTTACATGAGGAAATGTA+TGG | 0.361440 | 4.2:-92460090 | MS.gene053201:CDS |
| TCCTATCCTTAGTGACTTGA+AGG | 0.372010 | 4.2:+92462450 | None:intergenic |
| CACAAGCTTCTCTCTCTTTG+AGG | 0.384231 | 4.2:-92462336 | MS.gene053201:CDS |
| GGATATGTTGCTCAAGGCTT+GGG | 0.386546 | 4.2:-92460263 | MS.gene053201:CDS |
| CTTATTTGGACACCGGCTAA+TGG | 0.391000 | 4.2:-92461196 | MS.gene053201:CDS |
| TACAAACCTGTTGTTGTAGC+TGG | 0.406944 | 4.2:+92461648 | None:intergenic |
| TTGCAGCCATGCTAACCATT+TGG | 0.409888 | 4.2:+92461164 | None:intergenic |
| CTCAAGGCTTGGGAAATTTG+AGG | 0.429093 | 4.2:-92460253 | MS.gene053201:CDS |
| AAAGAATGCTGTAAATCTCT+TGG | 0.432127 | 4.2:+92462415 | None:intergenic |
| GAAAGACCAGCTACAACAAC+AGG | 0.435452 | 4.2:-92461654 | MS.gene053201:intron |
| TGGATATGTTGCTCAAGGCT+TGG | 0.436642 | 4.2:-92460264 | MS.gene053201:CDS |
| CATAGAAGGTGTGGACCTAA+TGG | 0.437830 | 4.2:-92461295 | MS.gene053201:intron |
| CTCTTTGAGGACTTTACAAA+AGG | 0.445621 | 4.2:-92462323 | MS.gene053201:CDS |
| AAAGGCAAGGTACTACTTGT+TGG | 0.448202 | 4.2:-92462305 | MS.gene053201:CDS |
| CGAATAAATCAACTTCTTCA+GGG | 0.450484 | 4.2:-92460424 | MS.gene053201:CDS |
| TTTATGAACTCTTCCTCCAT+TGG | 0.459680 | 4.2:+92462244 | None:intergenic |
| ATGTAGAGTTGGATCATTTG+TGG | 0.462453 | 4.2:+92461483 | None:intergenic |
| GCTTGGGAAATTTGAGGCCA+TGG | 0.471407 | 4.2:-92460247 | MS.gene053201:CDS |
| TAAGCATAATATGAAGGCTT+GGG | 0.491354 | 4.2:-92460345 | MS.gene053201:CDS |
| GAGAAATCTCTTTCACAAGC+TGG | 0.499901 | 4.2:+92460188 | None:intergenic |
| TTTCCACTACAGTAATGCTT+AGG | 0.503251 | 4.2:+92460140 | None:intergenic |
| ACTAAGTTTATCTGATGTGT+TGG | 0.503513 | 4.2:-92460309 | MS.gene053201:CDS |
| CCACTACAGTAATGCTTAGG+AGG | 0.503948 | 4.2:+92460143 | None:intergenic |
| AAGTTAACAATGATTACAAC+AGG | 0.504914 | 4.2:+92462371 | None:intergenic |
| TGGATTGGAGTATGTAGAGT+TGG | 0.505395 | 4.2:+92461472 | None:intergenic |
| TAATGGTTTAGGAAACCAAA+TGG | 0.508879 | 4.2:-92461179 | MS.gene053201:CDS |
| ATGATGCCTCATGCGTAAGC+AGG | 0.509599 | 4.2:-92461402 | MS.gene053201:intron |
| CAAGTCACTAAGGATAGGAT+AGG | 0.517734 | 4.2:-92462446 | MS.gene053201:CDS |
| ATTACAAATGTCACAACCAA+TGG | 0.518815 | 4.2:-92462260 | MS.gene053201:CDS |
| TGGTTTCCTAAACCATTAGC+CGG | 0.528205 | 4.2:+92461184 | None:intergenic |
| ATAAGCATAATATGAAGGCT+TGG | 0.534416 | 4.2:-92460346 | MS.gene053201:CDS |
| ATTATCTTGTATAGAAGCCA+TGG | 0.536564 | 4.2:+92460230 | None:intergenic |
| GGAAATCCTTCAAGTCACTA+AGG | 0.543070 | 4.2:-92462456 | MS.gene053201:CDS |
| TGATAATAAGCATAATATGA+AGG | 0.549269 | 4.2:-92460351 | MS.gene053201:CDS |
| CCTCCTAAGCATTACTGTAG+TGG | 0.554289 | 4.2:-92460143 | MS.gene053201:CDS |
| CTTCTTCTTTCATTTACATG+AGG | 0.557175 | 4.2:-92460100 | MS.gene053201:CDS |
| AGGAAACCAAATGGTTAGCA+TGG | 0.559741 | 4.2:-92461170 | MS.gene053201:CDS |
| TGAGGACTTTACAAAAGGCA+AGG | 0.572789 | 4.2:-92462318 | MS.gene053201:CDS |
| AAGTCACTAAGGATAGGATA+GGG | 0.584518 | 4.2:-92462445 | MS.gene053201:CDS |
| TTGTAACCTGCTTACGCATG+AGG | 0.586351 | 4.2:+92461396 | None:intergenic |
| CTTTAATAATACTATGTCAA+AGG | 0.586367 | 4.2:-92462192 | MS.gene053201:intron |
| AGAGTTCATAAAATATCAGA+TGG | 0.593218 | 4.2:-92462233 | MS.gene053201:CDS |
| AAGGTGTGGACCTAATGGTA+AGG | 0.597661 | 4.2:-92461290 | MS.gene053201:CDS |
| CAAATACCTTATTTGGACAC+CGG | 0.613150 | 4.2:-92461203 | MS.gene053201:CDS |
| TTGTGAAAGAGATTTCTCAA+TGG | 0.614474 | 4.2:-92460183 | MS.gene053201:CDS |
| ACAAATGTCACAACCAATGG+AGG | 0.621737 | 4.2:-92462257 | MS.gene053201:CDS |
| TGTCAAATTCAAGGTGCAGG+AGG | 0.625916 | 4.2:-92461706 | MS.gene053201:intron |
| TCCTTCAAGTCACTAAGGAT+AGG | 0.627501 | 4.2:-92462451 | MS.gene053201:CDS |
| GAATAAATCAACTTCTTCAG+GGG | 0.654370 | 4.2:-92460423 | MS.gene053201:CDS |
| TTAGGAGGAGCATGATAACA+TGG | 0.658710 | 4.2:+92460158 | None:intergenic |
| ATAGAAGTTCATCAACCAAG+TGG | 0.661605 | 4.2:-92460395 | MS.gene053201:CDS |
| TGAATCTTACAAGCATCACA+CGG | 0.663535 | 4.2:+92461116 | None:intergenic |
| AGATTCAGGAAAGACAAACA+AGG | 0.727705 | 4.2:-92461100 | MS.gene053201:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTCAAAAATAATAAATT+TGG | + | chr4.2:92460598-92460617 | None:intergenic | 10.0% |
| !!! | ATGATTAGTATAATAATTTT+TGG | - | chr4.2:92460942-92460961 | MS.gene053201:intron | 10.0% |
| !!! | CAATTTGATAATTTTTAAAT+TGG | + | chr4.2:92460660-92460679 | None:intergenic | 10.0% |
| !!! | TGATTAGTATAATAATTTTT+GGG | - | chr4.2:92460943-92460962 | MS.gene053201:intron | 10.0% |
| !! | AACAATACATAATATATGTA+AGG | - | chr4.2:92460391-92460410 | MS.gene053201:CDS | 15.0% |
| !!! | AAATAAGACATTTTTTTTTG+GGG | + | chr4.2:92460431-92460450 | None:intergenic | 15.0% |
| !!! | GAAATAAGACATTTTTTTTT+GGG | + | chr4.2:92460432-92460451 | None:intergenic | 15.0% |
| !!! | TGAAATAAGACATTTTTTTT+TGG | + | chr4.2:92460433-92460452 | None:intergenic | 15.0% |
| !! | ACTATGAAAAAATTCATAGA+AGG | - | chr4.2:92461195-92461214 | MS.gene053201:CDS | 20.0% |
| !! | AGCTAACAATAATTCAAATT+TGG | - | chr4.2:92461535-92461554 | MS.gene053201:intron | 20.0% |
| !! | CTTTAATAATACTATGTCAA+AGG | - | chr4.2:92460312-92460331 | MS.gene053201:CDS | 20.0% |
| !! | TGATAATAAGCATAATATGA+AGG | - | chr4.2:92462153-92462172 | MS.gene053201:intron | 20.0% |
| !! | TTCGATATTAAATATGAAGA+AGG | + | chr4.2:92461167-92461186 | None:intergenic | 20.0% |
| !!! | ACAACTTTTAATTACTCTAT+GGG | + | chr4.2:92460691-92460710 | None:intergenic | 20.0% |
| !!! | CTAAATTCTAAGAACATTAA+GGG | - | chr4.2:92461263-92461282 | MS.gene053201:CDS | 20.0% |
| !!! | TACAACTTTTAATTACTCTA+TGG | + | chr4.2:92460692-92460711 | None:intergenic | 20.0% |
| !!! | TCTAAATTCTAAGAACATTA+AGG | - | chr4.2:92461262-92461281 | MS.gene053201:CDS | 20.0% |
| ! | AAAAATTTCTCGGGTAAATT+TGG | + | chr4.2:92461599-92461618 | None:intergenic | 25.0% |
| ! | AAATATGAAGAAGGTTTATG+AGG | + | chr4.2:92461158-92461177 | None:intergenic | 25.0% |
| ! | AAATTCATAATTGCTTCTTG+TGG | + | chr4.2:92461902-92461921 | None:intergenic | 25.0% |
| ! | AAATTTCTATCAAACACACT+TGG | - | chr4.2:92461820-92461839 | MS.gene053201:intron | 25.0% |
| ! | AAGTTAACAATGATTACAAC+AGG | + | chr4.2:92460136-92460155 | None:intergenic | 25.0% |
| ! | AGAGTTCATAAAATATCAGA+TGG | - | chr4.2:92460271-92460290 | MS.gene053201:CDS | 25.0% |
| ! | AGATTGAGAAATAATGATGA+TGG | + | chr4.2:92461566-92461585 | None:intergenic | 25.0% |
| ! | ATATCAAAGTTTGATAGAGA+AGG | - | chr4.2:92461508-92461527 | MS.gene053201:CDS | 25.0% |
| ! | ATCACAGTGAAAAAATTTCT+CGG | + | chr4.2:92461609-92461628 | None:intergenic | 25.0% |
| ! | TAATGTACTTGTCAAATTCA+AGG | - | chr4.2:92460789-92460808 | MS.gene053201:intron | 25.0% |
| ! | TATTAATGCTACAACAGATT+TGG | + | chr4.2:92460509-92460528 | None:intergenic | 25.0% |
| ! | TCTGATTGCAAAATTAACAA+AGG | + | chr4.2:92461659-92461678 | None:intergenic | 25.0% |
| ! | TGAAAAAATGTTCGTTGAAA+AGG | - | chr4.2:92461730-92461749 | MS.gene053201:intron | 25.0% |
| ! | TTTAAATTATCACCGTATTC+TGG | + | chr4.2:92462049-92462068 | None:intergenic | 25.0% |
| !! | AACCAAGTTGAATTCAAAAA+CGG | + | chr4.2:92461443-92461462 | None:intergenic | 25.0% |
| !! | ACATGATTTTCATTCCAAAA+AGG | + | chr4.2:92461482-92461501 | None:intergenic | 25.0% |
| !! | ATTAAAGTCTCCTTTTATGT+TGG | + | chr4.2:92460299-92460318 | None:intergenic | 25.0% |
| !! | GAAGAAGCAAAATCTTTTAT+TGG | + | chr4.2:92462391-92462410 | None:intergenic | 25.0% |
| !! | GCAATTTTTCTTTGTCATTA+TGG | + | chr4.2:92461055-92461074 | None:intergenic | 25.0% |
| !! | TTTTCTTTGTCATTATGGAT+TGG | + | chr4.2:92461050-92461069 | None:intergenic | 25.0% |
| !! | TTTTTCATATCAAGTACGTT+TGG | + | chr4.2:92461959-92461978 | None:intergenic | 25.0% |
| !!! | CAACTTTTAATTACTCTATG+GGG | + | chr4.2:92460690-92460709 | None:intergenic | 25.0% |
| AAAGAATGCTGTAAATCTCT+TGG | + | chr4.2:92460092-92460111 | None:intergenic | 30.0% | |
| ACGAATAAATCAACTTCTTC+AGG | - | chr4.2:92462079-92462098 | MS.gene053201:intron | 30.0% | |
| ACTAAGTTTATCTGATGTGT+TGG | - | chr4.2:92462195-92462214 | MS.gene053201:CDS | 30.0% | |
| ATAAGCATAATATGAAGGCT+TGG | - | chr4.2:92462158-92462177 | MS.gene053201:intron | 30.0% | |
| ATTACAAATGTCACAACCAA+TGG | - | chr4.2:92460244-92460263 | MS.gene053201:CDS | 30.0% | |
| ATTATCTTGTATAGAAGCCA+TGG | + | chr4.2:92462277-92462296 | None:intergenic | 30.0% | |
| CAAAAACAAAGCGATTATGA+AGG | - | chr4.2:92462000-92462019 | MS.gene053201:intron | 30.0% | |
| CAAAGTGCAAATACCTTATT+TGG | - | chr4.2:92461294-92461313 | MS.gene053201:intron | 30.0% | |
| CATAATATATGTAAGGTCCA+AGG | - | chr4.2:92460398-92460417 | MS.gene053201:CDS | 30.0% | |
| CATTTACATGAGGAAATGTA+TGG | - | chr4.2:92462414-92462433 | MS.gene053201:CDS | 30.0% | |
| CGAATAAATCAACTTCTTCA+GGG | - | chr4.2:92462080-92462099 | MS.gene053201:intron | 30.0% | |
| CTTCTTCTTTCATTTACATG+AGG | - | chr4.2:92462404-92462423 | MS.gene053201:CDS | 30.0% | |
| GAAAAAATTCATAGAAGGTG+TGG | - | chr4.2:92461200-92461219 | MS.gene053201:CDS | 30.0% | |
| GAATAAATCAACTTCTTCAG+GGG | - | chr4.2:92462081-92462100 | MS.gene053201:intron | 30.0% | |
| GACAAAGAAAAATTGCTTGA+TGG | - | chr4.2:92461059-92461078 | MS.gene053201:intron | 30.0% | |
| TAAGCATAATATGAAGGCTT+GGG | - | chr4.2:92462159-92462178 | MS.gene053201:intron | 30.0% | |
| TAATGGTTTAGGAAACCAAA+TGG | - | chr4.2:92461325-92461344 | MS.gene053201:intron | 30.0% | |
| TAGTCAAGCTCTTATCATTA+AGG | - | chr4.2:92461631-92461650 | MS.gene053201:intron | 30.0% | |
| TCAAGTTCTTTGCTGAAAAA+TGG | + | chr4.2:92461713-92461732 | None:intergenic | 30.0% | |
| TCACAGTGAAAAAATTTCTC+GGG | + | chr4.2:92461608-92461627 | None:intergenic | 30.0% | |
| TTGTGAAAGAGATTTCTCAA+TGG | - | chr4.2:92462321-92462340 | MS.gene053201:CDS | 30.0% | |
| ! | ACTACTTCTTTGTCTACTTT+TGG | - | chr4.2:92462220-92462239 | MS.gene053201:CDS | 30.0% |
| ! | GAATATTTCTCATGCTTTTG+TGG | + | chr4.2:92461244-92461263 | None:intergenic | 30.0% |
| ! | GATTGAACACTCTTATTTGA+AGG | + | chr4.2:92461868-92461887 | None:intergenic | 30.0% |
| ! | TGAGGAAATGTATGGATTTT+TGG | - | chr4.2:92462422-92462441 | MS.gene053201:CDS | 30.0% |
| !! | AATCAGTTTTGTGCTATGAT+TGG | + | chr4.2:92460482-92460501 | None:intergenic | 30.0% |
| !! | ATGTATTGTTTTACCAACTG+AGG | + | chr4.2:92460381-92460400 | None:intergenic | 30.0% |
| !!! | AAATGTATGGATTTTTGGTC+AGG | - | chr4.2:92462427-92462446 | MS.gene053201:CDS | 30.0% |
| AAGTCACTAAGGATAGGATA+GGG | - | chr4.2:92460059-92460078 | MS.gene053201:CDS | 35.0% | |
| AATGTTCGTTGAAAAGGACA+CGG | - | chr4.2:92461736-92461755 | MS.gene053201:intron | 35.0% | |
| AGATTCAGGAAAGACAAACA+AGG | - | chr4.2:92461404-92461423 | MS.gene053201:CDS | 35.0% | |
| ATAGAAGTTCATCAACCAAG+TGG | - | chr4.2:92462109-92462128 | MS.gene053201:intron | 35.0% | |
| ATGTAGAGTTGGATCATTTG+TGG | + | chr4.2:92461024-92461043 | None:intergenic | 35.0% | |
| ATTTCTCGGGTAAATTTGGT+CGG | + | chr4.2:92461595-92461614 | None:intergenic | 35.0% | |
| GCGTCTTTATATCCAGAATA+CGG | - | chr4.2:92462034-92462053 | MS.gene053201:intron | 35.0% | |
| GCTAAAGCAGATGAGAAAAT+AGG | - | chr4.2:92461842-92461861 | MS.gene053201:intron | 35.0% | |
| GCTTCTTGTGGAGTTAAAAT+AGG | + | chr4.2:92461890-92461909 | None:intergenic | 35.0% | |
| TGAATCTTACAAGCATCACA+CGG | + | chr4.2:92461391-92461410 | None:intergenic | 35.0% | |
| TTGTGGTAATCCTTACCATT+AGG | + | chr4.2:92461227-92461246 | None:intergenic | 35.0% | |
| TTTATGAACTCTTCCTCCAT+TGG | + | chr4.2:92460263-92460282 | None:intergenic | 35.0% | |
| TTTCCACTACAGTAATGCTT+AGG | + | chr4.2:92462367-92462386 | None:intergenic | 35.0% | |
| ! | ACTTTTGGATATGTTGCTCA+AGG | - | chr4.2:92462235-92462254 | MS.gene053201:CDS | 35.0% |
| ! | CAAATACCTTATTTGGACAC+CGG | - | chr4.2:92461301-92461320 | MS.gene053201:intron | 35.0% |
| ! | CTCTTTGAGGACTTTACAAA+AGG | - | chr4.2:92460181-92460200 | MS.gene053201:CDS | 35.0% |
| ! | TACCAGAAAAGTCTCCTTTT+TGG | - | chr4.2:92461465-92461484 | MS.gene053201:CDS | 35.0% |
| ! | TTCCAAAAAGGAGACTTTTC+TGG | + | chr4.2:92461470-92461489 | None:intergenic | 35.0% |
| !! | AATGGTGTCATGAAAAGAGA+AGG | + | chr4.2:92461695-92461714 | None:intergenic | 35.0% |
| !! | TTTTTGGTCAGGTGTAAAGT+TGG | - | chr4.2:92462438-92462457 | MS.gene053201:CDS | 35.0% |
| !!! | AGCCGTTTTTGAATTCAACT+TGG | - | chr4.2:92461438-92461457 | MS.gene053201:CDS | 35.0% |
| !!! | TTTGTTTTTGTCGCTAGAAG+TGG | + | chr4.2:92461990-92462009 | None:intergenic | 35.0% |
| ACAAATGTCACAACCAATGG+AGG | - | chr4.2:92460247-92460266 | MS.gene053201:CDS | 40.0% | |
| ACTTGTCAAATTCAAGGTGC+AGG | - | chr4.2:92460795-92460814 | MS.gene053201:intron | 40.0% | |
| AGGAAACCAAATGGTTAGCA+TGG | - | chr4.2:92461334-92461353 | MS.gene053201:intron | 40.0% | |
| CAAGTCACTAAGGATAGGAT+AGG | - | chr4.2:92460058-92460077 | MS.gene053201:CDS | 40.0% | |
| GAGAAATCTCTTTCACAAGC+TGG | + | chr4.2:92462319-92462338 | None:intergenic | 40.0% | |
| GGAAATCCTTCAAGTCACTA+AGG | - | chr4.2:92460048-92460067 | MS.gene053201:CDS | 40.0% | |
| GTGTGATGCTTGTAAGATTC+AGG | - | chr4.2:92461390-92461409 | MS.gene053201:intron | 40.0% | |
| TACAAACCTGTTGTTGTAGC+TGG | + | chr4.2:92460859-92460878 | None:intergenic | 40.0% | |
| TCCTATCCTTAGTGACTTGA+AGG | + | chr4.2:92460057-92460076 | None:intergenic | 40.0% | |
| TCCTTCAAGTCACTAAGGAT+AGG | - | chr4.2:92460053-92460072 | MS.gene053201:CDS | 40.0% | |
| TCGATCTCTCTCAAATCTAC+AGG | - | chr4.2:92460972-92460991 | MS.gene053201:intron | 40.0% | |
| TGAGGACTTTACAAAAGGCA+AGG | - | chr4.2:92460186-92460205 | MS.gene053201:CDS | 40.0% | |
| TGGTTTCCTAAACCATTAGC+CGG | + | chr4.2:92461323-92461342 | None:intergenic | 40.0% | |
| ! | AAAGGCAAGGTACTACTTGT+TGG | - | chr4.2:92460199-92460218 | MS.gene053201:CDS | 40.0% |
| ! | GACACGGTTTTTCACCATTT+AGG | - | chr4.2:92461752-92461771 | MS.gene053201:intron | 40.0% |
| ! | TCAGATGGTGCCAACATAAA+AGG | - | chr4.2:92460286-92460305 | MS.gene053201:CDS | 40.0% |
| ! | TGGATTGGAGTATGTAGAGT+TGG | + | chr4.2:92461035-92461054 | None:intergenic | 40.0% |
| ! | TTAGGAGGAGCATGATAACA+TGG | + | chr4.2:92462349-92462368 | None:intergenic | 40.0% |
| !!! | TTTTTTGGGGCTTTGAACCT+TGG | + | chr4.2:92460418-92460437 | None:intergenic | 40.0% |
| AAGGTGTGGACCTAATGGTA+AGG | - | chr4.2:92461214-92461233 | MS.gene053201:CDS | 45.0% | |
| CACAAGCTTCTCTCTCTTTG+AGG | - | chr4.2:92460168-92460187 | MS.gene053201:CDS | 45.0% | |
| CATTAGCCGGTGTCCAAATA+AGG | + | chr4.2:92461310-92461329 | None:intergenic | 45.0% | |
| CCACTACAGTAATGCTTAGG+AGG | + | chr4.2:92462364-92462383 | None:intergenic | 45.0% | |
| CCTCCTAAGCATTACTGTAG+TGG | - | chr4.2:92462361-92462380 | MS.gene053201:CDS | 45.0% | |
| CTCAAGGCTTGGGAAATTTG+AGG | - | chr4.2:92462251-92462270 | MS.gene053201:CDS | 45.0% | |
| CTTCATTCGAAGGGTGGAAA+AGG | + | chr4.2:92461784-92461803 | None:intergenic | 45.0% | |
| GAAAGACCAGCTACAACAAC+AGG | - | chr4.2:92460850-92460869 | MS.gene053201:intron | 45.0% | |
| GGAAAAGGTAGCGTCCTAAA+TGG | + | chr4.2:92461769-92461788 | None:intergenic | 45.0% | |
| GGATATGTTGCTCAAGGCTT+GGG | - | chr4.2:92462241-92462260 | MS.gene053201:CDS | 45.0% | |
| TGGATATGTTGCTCAAGGCT+TGG | - | chr4.2:92462240-92462259 | MS.gene053201:CDS | 45.0% | |
| TGTCAAATTCAAGGTGCAGG+AGG | - | chr4.2:92460798-92460817 | MS.gene053201:intron | 45.0% | |
| TTGCAGCCATGCTAACCATT+TGG | + | chr4.2:92461343-92461362 | None:intergenic | 45.0% | |
| TTGTAACCTGCTTACGCATG+AGG | + | chr4.2:92461111-92461130 | None:intergenic | 45.0% | |
| ! | CATAGAAGGTGTGGACCTAA+TGG | - | chr4.2:92461209-92461228 | MS.gene053201:CDS | 45.0% |
| ! | CTTATTTGGACACCGGCTAA+TGG | - | chr4.2:92461308-92461327 | MS.gene053201:intron | 45.0% |
| ! | TTTTGCTGCTCTTCACCACT+TGG | + | chr4.2:92462127-92462146 | None:intergenic | 45.0% |
| !! | CTTGATGGACTCTTAGCTTC+TGG | - | chr4.2:92461074-92461093 | MS.gene053201:intron | 45.0% |
| AGTCTCCACGCTTCATTCGA+AGG | + | chr4.2:92461794-92461813 | None:intergenic | 50.0% | |
| ATGATGCCTCATGCGTAAGC+AGG | - | chr4.2:92461102-92461121 | MS.gene053201:CDS | 50.0% | |
| GTCTCCACGCTTCATTCGAA+GGG | + | chr4.2:92461793-92461812 | None:intergenic | 50.0% | |
| TCTCGTGAGCTTACCTCAGT+TGG | - | chr4.2:92460365-92460384 | MS.gene053201:CDS | 50.0% | |
| ! | GCTTGGGAAATTTGAGGCCA+TGG | - | chr4.2:92462257-92462276 | MS.gene053201:CDS | 50.0% |
| ! | TGGACACCGGCTAATGGTTT+AGG | - | chr4.2:92461314-92461333 | MS.gene053201:intron | 50.0% |
| TCCACCCTTCGAATGAAGCG+TGG | - | chr4.2:92461786-92461805 | MS.gene053201:intron | 55.0% | |
| TCCACGCTTCATTCGAAGGG+TGG | + | chr4.2:92461790-92461809 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 92460046 | 92462480 | 92460046 | ID=MS.gene053201 |
| chr4.2 | mRNA | 92460046 | 92462480 | 92460046 | ID=MS.gene053201.t1;Parent=MS.gene053201 |
| chr4.2 | exon | 92462193 | 92462480 | 92462193 | ID=MS.gene053201.t1.exon1;Parent=MS.gene053201.t1 |
| chr4.2 | CDS | 92462193 | 92462480 | 92462193 | ID=cds.MS.gene053201.t1;Parent=MS.gene053201.t1 |
| chr4.2 | exon | 92461655 | 92461715 | 92461655 | ID=MS.gene053201.t1.exon2;Parent=MS.gene053201.t1 |
| chr4.2 | CDS | 92461655 | 92461715 | 92461655 | ID=cds.MS.gene053201.t1;Parent=MS.gene053201.t1 |
| chr4.2 | exon | 92461403 | 92461532 | 92461403 | ID=MS.gene053201.t1.exon3;Parent=MS.gene053201.t1 |
| chr4.2 | CDS | 92461403 | 92461532 | 92461403 | ID=cds.MS.gene053201.t1;Parent=MS.gene053201.t1 |
| chr4.2 | exon | 92461101 | 92461312 | 92461101 | ID=MS.gene053201.t1.exon4;Parent=MS.gene053201.t1 |
| chr4.2 | CDS | 92461101 | 92461312 | 92461101 | ID=cds.MS.gene053201.t1;Parent=MS.gene053201.t1 |
| chr4.2 | exon | 92460046 | 92460476 | 92460046 | ID=MS.gene053201.t1.exon5;Parent=MS.gene053201.t1 |
| chr4.2 | CDS | 92460046 | 92460476 | 92460046 | ID=cds.MS.gene053201.t1;Parent=MS.gene053201.t1 |
| Gene Sequence |
| Protein sequence |
