Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41866.t1 | XP_003624832.1 | 98.8 | 320 | 4 | 0 | 1 | 320 | 1 | 320 | 2.80E-154 | 554.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41866.t1 | Q9LES3 | 54.3 | 328 | 109 | 11 | 1 | 319 | 1 | 296 | 1.9e-66 | 254.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41866.t1 | Q2HUH2 | 98.8 | 320 | 4 | 0 | 1 | 320 | 1 | 320 | 2.1e-154 | 554.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41866.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051902 | MS.gene41866 | 0.808362 | 3.21E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene41866 | 0.809255 | 2.07E-50 | -1.69E-46 |
| MS.gene053045 | MS.gene41866 | 0.806449 | 8.18E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene41866 | 0.802564 | 5.28E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene41866 | 0.8036 | 3.23E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene41866 | 0.821353 | 4.22E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene41866 | 0.805715 | 1.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55561 | MS.gene41866 | PPI |
| MS.gene013906 | MS.gene41866 | PPI |
| MS.gene41906 | MS.gene41866 | PPI |
| MS.gene41866 | MS.gene47208 | PPI |
| MS.gene41866 | MS.gene83996 | PPI |
| MS.gene068056 | MS.gene41866 | PPI |
| MS.gene62322 | MS.gene41866 | PPI |
| MS.gene41866 | MS.gene068056 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41866.t1 | MTR_7g088090 | 98.750 | 320 | 4 | 0 | 1 | 320 | 1 | 320 | 0.0 | 652 |
| MS.gene41866.t1 | MTR_6g026800 | 61.145 | 332 | 106 | 8 | 1 | 320 | 1 | 321 | 3.63e-117 | 341 |
| MS.gene41866.t1 | MTR_3g010660 | 48.276 | 319 | 131 | 8 | 16 | 318 | 20 | 320 | 8.22e-86 | 261 |
| MS.gene41866.t1 | MTR_8g043960 | 48.387 | 310 | 137 | 7 | 15 | 320 | 23 | 313 | 8.39e-86 | 261 |
| MS.gene41866.t1 | MTR_4g085910 | 36.937 | 333 | 148 | 8 | 16 | 292 | 18 | 344 | 1.82e-45 | 159 |
| MS.gene41866.t1 | MTR_2g086390 | 32.886 | 298 | 134 | 10 | 19 | 298 | 11 | 260 | 1.70e-30 | 117 |
| MS.gene41866.t1 | MTR_2g086390 | 32.192 | 292 | 133 | 8 | 19 | 293 | 11 | 254 | 6.09e-30 | 115 |
| MS.gene41866.t1 | MTR_2g086340 | 35.495 | 293 | 143 | 11 | 17 | 293 | 23 | 285 | 8.75e-25 | 102 |
| MS.gene41866.t1 | MTR_3g101780 | 40.000 | 150 | 75 | 3 | 2 | 146 | 14 | 153 | 1.74e-23 | 100 |
| MS.gene41866.t1 | MTR_3g101780 | 67.213 | 61 | 19 | 1 | 235 | 295 | 339 | 398 | 8.33e-17 | 80.9 |
| MS.gene41866.t1 | MTR_5g060990 | 30.195 | 308 | 160 | 10 | 16 | 283 | 12 | 304 | 6.80e-23 | 97.1 |
| MS.gene41866.t1 | MTR_5g088230 | 45.600 | 125 | 56 | 3 | 16 | 134 | 17 | 135 | 5.21e-22 | 93.6 |
| MS.gene41866.t1 | MTR_5g088230 | 47.328 | 131 | 62 | 3 | 194 | 318 | 133 | 262 | 2.82e-19 | 86.3 |
| MS.gene41866.t1 | MTR_5g088230 | 45.600 | 125 | 56 | 3 | 16 | 134 | 22 | 140 | 5.99e-22 | 93.6 |
| MS.gene41866.t1 | MTR_5g088230 | 47.328 | 131 | 62 | 3 | 194 | 318 | 138 | 267 | 3.21e-19 | 85.9 |
| MS.gene41866.t1 | MTR_7g104480 | 30.319 | 188 | 97 | 5 | 22 | 191 | 45 | 216 | 1.44e-15 | 77.4 |
| MS.gene41866.t1 | MTR_7g015990 | 76.596 | 47 | 8 | 1 | 249 | 292 | 120 | 166 | 6.50e-13 | 66.6 |
| MS.gene41866.t1 | MTR_8g075130 | 62.963 | 54 | 17 | 1 | 242 | 292 | 98 | 151 | 2.30e-12 | 65.1 |
| MS.gene41866.t1 | MTR_4g094390 | 60.714 | 56 | 22 | 0 | 236 | 291 | 117 | 172 | 8.88e-12 | 63.5 |
| MS.gene41866.t1 | MTR_5g022780 | 64.286 | 56 | 8 | 1 | 249 | 292 | 166 | 221 | 1.39e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41866.t1 | AT3G56850 | 54.711 | 329 | 108 | 10 | 1 | 320 | 1 | 297 | 8.33e-101 | 298 |
| MS.gene41866.t1 | AT2G41070 | 48.160 | 326 | 99 | 11 | 1 | 320 | 10 | 271 | 2.49e-82 | 250 |
| MS.gene41866.t1 | AT2G41070 | 48.160 | 326 | 99 | 11 | 1 | 320 | 1 | 262 | 2.85e-82 | 250 |
| MS.gene41866.t1 | AT2G41070 | 48.160 | 326 | 99 | 11 | 1 | 320 | 1 | 262 | 2.85e-82 | 250 |
| MS.gene41866.t1 | AT2G41070 | 48.160 | 326 | 99 | 11 | 1 | 320 | 1 | 262 | 2.85e-82 | 250 |
| MS.gene41866.t1 | AT2G41070 | 46.488 | 299 | 90 | 11 | 1 | 293 | 1 | 235 | 4.08e-67 | 211 |
| MS.gene41866.t1 | AT1G49720 | 37.766 | 188 | 90 | 5 | 16 | 190 | 23 | 196 | 2.37e-26 | 108 |
| MS.gene41866.t1 | AT1G49720 | 37.766 | 188 | 90 | 5 | 16 | 190 | 23 | 196 | 3.99e-26 | 107 |
| MS.gene41866.t1 | AT1G49720 | 37.766 | 188 | 90 | 5 | 16 | 190 | 23 | 196 | 3.99e-26 | 107 |
| MS.gene41866.t1 | AT3G44460 | 34.589 | 292 | 147 | 8 | 16 | 295 | 35 | 294 | 4.48e-26 | 106 |
| MS.gene41866.t1 | AT3G19290 | 43.571 | 140 | 61 | 3 | 16 | 137 | 34 | 173 | 5.16e-24 | 101 |
| MS.gene41866.t1 | AT3G19290 | 51.316 | 76 | 28 | 2 | 217 | 292 | 329 | 395 | 1.51e-13 | 71.2 |
| MS.gene41866.t1 | AT3G19290 | 43.571 | 140 | 61 | 3 | 16 | 137 | 34 | 173 | 8.66e-24 | 100 |
| MS.gene41866.t1 | AT3G19290 | 43.571 | 140 | 61 | 3 | 16 | 137 | 34 | 173 | 1.12e-23 | 100 |
| MS.gene41866.t1 | AT3G19290 | 51.316 | 76 | 28 | 2 | 217 | 292 | 329 | 395 | 2.20e-13 | 70.9 |
| MS.gene41866.t1 | AT3G19290 | 43.571 | 140 | 61 | 3 | 16 | 137 | 34 | 173 | 1.12e-23 | 100 |
| MS.gene41866.t1 | AT3G19290 | 51.316 | 76 | 28 | 2 | 217 | 292 | 329 | 395 | 2.20e-13 | 70.9 |
| MS.gene41866.t1 | AT3G19290 | 43.571 | 140 | 61 | 3 | 16 | 137 | 34 | 173 | 1.13e-23 | 100 |
| MS.gene41866.t1 | AT3G19290 | 51.316 | 76 | 28 | 2 | 217 | 292 | 329 | 395 | 2.24e-13 | 70.9 |
| MS.gene41866.t1 | AT1G45249 | 52.252 | 111 | 38 | 5 | 217 | 319 | 312 | 415 | 2.10e-19 | 88.6 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 5.41e-19 | 87.4 |
| MS.gene41866.t1 | AT1G45249 | 52.252 | 111 | 38 | 5 | 217 | 319 | 327 | 430 | 2.24e-19 | 88.6 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 36 | 203 | 5.38e-19 | 87.4 |
| MS.gene41866.t1 | AT1G45249 | 52.252 | 111 | 38 | 5 | 217 | 319 | 327 | 430 | 2.24e-19 | 88.6 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 36 | 203 | 5.38e-19 | 87.4 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 6.49e-19 | 87.0 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 6.49e-19 | 87.0 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 6.49e-19 | 87.0 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 6.49e-19 | 87.0 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 7.23e-19 | 86.7 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 7.23e-19 | 86.7 |
| MS.gene41866.t1 | AT1G45249 | 37.500 | 176 | 83 | 6 | 16 | 172 | 21 | 188 | 8.40e-19 | 87.0 |
| MS.gene41866.t1 | AT1G45249 | 47.541 | 122 | 38 | 6 | 217 | 319 | 312 | 426 | 1.66e-16 | 80.1 |
| MS.gene41866.t1 | AT2G36270 | 70.149 | 67 | 18 | 2 | 233 | 298 | 341 | 406 | 3.59e-18 | 85.1 |
| MS.gene41866.t1 | AT2G36270 | 31.351 | 185 | 64 | 5 | 15 | 137 | 36 | 219 | 8.46e-13 | 68.9 |
| MS.gene41866.t1 | AT2G36270 | 70.149 | 67 | 18 | 2 | 233 | 298 | 341 | 406 | 3.59e-18 | 85.1 |
| MS.gene41866.t1 | AT2G36270 | 31.351 | 185 | 64 | 5 | 15 | 137 | 36 | 219 | 8.46e-13 | 68.9 |
| MS.gene41866.t1 | AT2G36270 | 70.149 | 67 | 18 | 2 | 233 | 298 | 341 | 406 | 3.76e-18 | 85.1 |
| MS.gene41866.t1 | AT2G36270 | 31.351 | 185 | 64 | 5 | 15 | 137 | 36 | 219 | 1.47e-12 | 68.6 |
| MS.gene41866.t1 | AT4G34000 | 32.919 | 161 | 69 | 5 | 16 | 137 | 27 | 187 | 2.18e-17 | 82.8 |
| MS.gene41866.t1 | AT4G34000 | 48.113 | 106 | 44 | 3 | 197 | 292 | 312 | 416 | 3.08e-17 | 82.4 |
| MS.gene41866.t1 | AT4G34000 | 32.919 | 161 | 69 | 5 | 16 | 137 | 27 | 187 | 2.43e-17 | 82.8 |
| MS.gene41866.t1 | AT4G34000 | 48.113 | 106 | 44 | 3 | 197 | 292 | 312 | 416 | 3.74e-17 | 82.0 |
| MS.gene41866.t1 | AT4G34000 | 32.919 | 161 | 69 | 5 | 16 | 137 | 27 | 187 | 2.43e-17 | 82.8 |
| MS.gene41866.t1 | AT4G34000 | 48.113 | 106 | 44 | 3 | 197 | 292 | 312 | 416 | 3.74e-17 | 82.0 |
| MS.gene41866.t1 | AT4G34000 | 32.919 | 161 | 69 | 5 | 16 | 137 | 27 | 187 | 2.43e-17 | 82.8 |
| MS.gene41866.t1 | AT4G34000 | 48.113 | 106 | 44 | 3 | 197 | 292 | 312 | 416 | 3.74e-17 | 82.0 |
| MS.gene41866.t1 | AT4G35900 | 59.155 | 71 | 28 | 1 | 250 | 320 | 216 | 285 | 3.22e-17 | 80.9 |
| MS.gene41866.t1 | AT2G17770 | 55.556 | 72 | 31 | 1 | 249 | 320 | 125 | 195 | 5.68e-15 | 72.8 |
| MS.gene41866.t1 | AT1G03970 | 31.250 | 208 | 79 | 7 | 96 | 297 | 85 | 234 | 8.81e-14 | 70.9 |
| MS.gene41866.t1 | AT5G44080 | 29.536 | 237 | 108 | 8 | 96 | 317 | 120 | 312 | 3.17e-13 | 69.7 |
| MS.gene41866.t1 | AT5G42910 | 43.925 | 107 | 50 | 5 | 218 | 317 | 264 | 367 | 2.64e-11 | 64.3 |
Find 82 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATCAGCTTGGAAATTT+AGG | 0.083769 | 7.4:+20221808 | MS.gene41866:CDS |
| CAGCATGGTCAACTGGCTTC+TGG | 0.131375 | 7.4:+20221937 | MS.gene41866:CDS |
| ATGAATCCATTGACACTTTC+TGG | 0.149546 | 7.4:+20221967 | MS.gene41866:CDS |
| CAAGGTTCTGGGTTGGATTC+TGG | 0.152919 | 7.4:+20221895 | MS.gene41866:CDS |
| TCTGAAGCTGCTCAAGGTTC+TGG | 0.221535 | 7.4:+20221883 | MS.gene41866:CDS |
| AAAATCAGCTTGGAAATTTA+GGG | 0.258433 | 7.4:+20221809 | MS.gene41866:CDS |
| TGTGGTTCAACAGCCTGTTT+TGG | 0.318849 | 7.4:+20222317 | MS.gene41866:CDS |
| AGAAAACTATTGATGAGGTT+TGG | 0.366361 | 7.4:+20222001 | MS.gene41866:CDS |
| ACAGAAGAAGAGTGCTAGTC+AGG | 0.399470 | 7.4:+20222035 | MS.gene41866:CDS |
| GTTCTGCGAAGCTGATGCTT+AGG | 0.411723 | 7.4:-20224427 | None:intergenic |
| GGGTCTGGTGGTGGCATACT+TGG | 0.413639 | 7.4:-20224406 | None:intergenic |
| ATCTAGATTCATGCTTCCTA+AGG | 0.414294 | 7.4:-20221836 | None:intergenic |
| CACAAACTCAAGGTCGGAAA+AGG | 0.415817 | 7.4:+20222406 | MS.gene41866:CDS |
| TCGGTCGCGGGCTAGAAAAC+AGG | 0.419550 | 7.4:+20222506 | MS.gene41866:CDS |
| CACCATTGCTTCAGTGTATC+CGG | 0.423926 | 7.4:-20222343 | None:intergenic |
| CTGAAGCTGCTCAAGGTTCT+GGG | 0.427919 | 7.4:+20221884 | MS.gene41866:CDS |
| AGAACAAAAGACTGGAACTT+TGG | 0.437900 | 7.4:+20221744 | MS.gene41866:CDS |
| TTACATGCAGCATGGTCAAC+TGG | 0.446389 | 7.4:+20221930 | MS.gene41866:CDS |
| ATGAGTTGCTGAAGAGTTTG+TGG | 0.448987 | 7.4:+20221857 | MS.gene41866:CDS |
| GTGTATCCGGCATCCAAAAC+AGG | 0.451089 | 7.4:-20222330 | None:intergenic |
| GGGAATCTGCAGCTCGGTCG+CGG | 0.454529 | 7.4:+20222493 | MS.gene41866:CDS |
| AGCATGGTCAACTGGCTTCT+GGG | 0.456125 | 7.4:+20221938 | MS.gene41866:CDS |
| TTTGCAATAAAGTCTTCAAA+GGG | 0.467582 | 7.4:-20224461 | None:intergenic |
| ATACATCCCAGCATGGTCAT+TGG | 0.471305 | 7.4:+20222190 | MS.gene41866:CDS |
| AGCTGCTCAAGGTTCTGGGT+TGG | 0.476833 | 7.4:+20221888 | MS.gene41866:CDS |
| TTCTGCGAAGCTGATGCTTA+GGG | 0.478401 | 7.4:-20224426 | None:intergenic |
| CTGTGGAGAGGAGGCAGAAG+AGG | 0.493448 | 7.4:+20222457 | MS.gene41866:CDS |
| ACTTGGTGAGATGACTTTGG+AGG | 0.493788 | 7.4:+20222074 | MS.gene41866:CDS |
| TGATGCTGATGTTGTTGTTG+TGG | 0.499071 | 7.4:-20222243 | None:intergenic |
| AGTGAGGATAATGCTATGTC+AGG | 0.499581 | 7.4:+20222138 | MS.gene41866:CDS |
| GAGGATTTCTTGATGAAAGC+TGG | 0.506897 | 7.4:+20222093 | MS.gene41866:CDS |
| GGAAATTTAGGGAAACCCTT+AGG | 0.509333 | 7.4:+20221820 | MS.gene41866:CDS |
| AGATCACCAGAAAGTGTCAA+TGG | 0.510245 | 7.4:-20221973 | None:intergenic |
| TGTTGTGGTTGCTGCACTGA+AGG | 0.512843 | 7.4:-20222228 | None:intergenic |
| GATGAGGTTCAAAATCAGCT+TGG | 0.519734 | 7.4:+20221799 | MS.gene41866:CDS |
| CATCAGAATAATATGATGAC+TGG | 0.520032 | 7.4:+20222270 | MS.gene41866:CDS |
| GGTCGGAAAAGGGTTGCCTC+TGG | 0.520884 | 7.4:+20222417 | MS.gene41866:CDS |
| GGAATCTGCAGCTCGGTCGC+GGG | 0.521215 | 7.4:+20222494 | MS.gene41866:CDS |
| AAGGGTTGCCTCTGGTGTTG+TGG | 0.526242 | 7.4:+20222425 | MS.gene41866:CDS |
| TACACTTGGTGAGATGACTT+TGG | 0.528431 | 7.4:+20222071 | MS.gene41866:CDS |
| CGAAGCTGATGCTTAGGGTC+TGG | 0.529237 | 7.4:-20224421 | None:intergenic |
| GTTGTGGTTGCTGCACTGAA+GGG | 0.529499 | 7.4:-20222227 | None:intergenic |
| TGGACATCTGAAGCTGCTCA+AGG | 0.541485 | 7.4:+20221877 | MS.gene41866:CDS |
| ACAGGCTTACACACAAGAGC+TGG | 0.542704 | 7.4:+20222622 | MS.gene41866:intron |
| ATGCTGCATGTAACCATCAC+TGG | 0.546349 | 7.4:-20221920 | None:intergenic |
| AGAAGAGTGCTAGTCAGGAT+AGG | 0.552109 | 7.4:+20222040 | MS.gene41866:CDS |
| ACAAACTCAAGGTCGGAAAA+GGG | 0.554545 | 7.4:+20222407 | MS.gene41866:CDS |
| AAAAGACTGGAACTTTGGCT+AGG | 0.557530 | 7.4:+20221749 | MS.gene41866:CDS |
| GCAATCCAAGAACAAAAGAC+TGG | 0.559028 | 7.4:+20221736 | MS.gene41866:CDS |
| TGATGCTTAGGGTCTGGTGG+TGG | 0.567579 | 7.4:-20224415 | None:intergenic |
| GTACAATCTCACATTTGATG+AGG | 0.569368 | 7.4:+20221783 | MS.gene41866:CDS |
| TCTAGATTCATGCTTCCTAA+GGG | 0.569459 | 7.4:-20221835 | None:intergenic |
| AGGTTATATGGCTGGTCATG+TGG | 0.572563 | 7.4:+20222299 | MS.gene41866:CDS |
| GTTGCTGCACTGAAGGGACT+TGG | 0.573952 | 7.4:-20222221 | None:intergenic |
| TAGTAAGAAAACTATTGATG+AGG | 0.581872 | 7.4:+20221996 | MS.gene41866:CDS |
| ACTGCATCCAATGACCATGC+TGG | 0.582214 | 7.4:-20222197 | None:intergenic |
| TTGGATTCTGGAACCAGTGA+TGG | 0.584696 | 7.4:+20221907 | MS.gene41866:CDS |
| ACTTAGAAGAAGAGAATGAA+AGG | 0.584805 | 7.4:+20222660 | MS.gene41866:CDS |
| CAGATACACAAACTCAAGGT+CGG | 0.585416 | 7.4:+20222400 | MS.gene41866:CDS |
| AGGATAATGCTATGTCAGGA+AGG | 0.586500 | 7.4:+20222142 | MS.gene41866:CDS |
| CACTGAATCATTTCCTAGTG+AGG | 0.587073 | 7.4:+20222122 | MS.gene41866:CDS |
| AGCTGATGCTTAGGGTCTGG+TGG | 0.587120 | 7.4:-20224418 | None:intergenic |
| AAAGACTGGAACTTTGGCTA+GGG | 0.596011 | 7.4:+20221750 | MS.gene41866:CDS |
| CTGCATCCAATGACCATGCT+GGG | 0.608106 | 7.4:-20222196 | None:intergenic |
| ACTGGAACTTTGGCTAGGGA+AGG | 0.612277 | 7.4:+20221754 | MS.gene41866:CDS |
| TTGAGAAAACTGTGGAGAGG+AGG | 0.618222 | 7.4:+20222448 | MS.gene41866:CDS |
| GAAGTAGCTATTAAAGAAGA+CGG | 0.621434 | 7.4:-20222375 | None:intergenic |
| AAAATAGGGAATCTGCAGCT+CGG | 0.624873 | 7.4:+20222487 | MS.gene41866:CDS |
| TTGAAAATGGGATCTCATGG+AGG | 0.632717 | 7.4:+20221712 | None:intergenic |
| GATAGGAGAACAGCTACACT+TGG | 0.637974 | 7.4:+20222057 | MS.gene41866:CDS |
| TCATCAGATACACAAACTCA+AGG | 0.638560 | 7.4:+20222396 | MS.gene41866:CDS |
| TTTCTTGATGAAAGCTGGTG+TGG | 0.647086 | 7.4:+20222098 | MS.gene41866:CDS |
| CTCACTAGGAAATGATTCAG+TGG | 0.653229 | 7.4:-20222121 | None:intergenic |
| TTTCTCAACCACAACACCAG+AGG | 0.653421 | 7.4:-20222433 | None:intergenic |
| GGATAATGCTATGTCAGGAA+GGG | 0.659996 | 7.4:+20222143 | MS.gene41866:CDS |
| TGCCGGATACACTGAAGCAA+TGG | 0.661929 | 7.4:+20222341 | MS.gene41866:CDS |
| GACATAGCATTATCCTCACT+AGG | 0.666638 | 7.4:-20222135 | None:intergenic |
| AGTGATGGTTACATGCAGCA+TGG | 0.680149 | 7.4:+20221922 | MS.gene41866:CDS |
| CAACAAAATACATCCCAGCA+TGG | 0.680747 | 7.4:+20222183 | MS.gene41866:CDS |
| TGGTTGAGAAAACTGTGGAG+AGG | 0.682616 | 7.4:+20222445 | MS.gene41866:CDS |
| TTGCAATAAAGTCTTCAAAG+GGG | 0.695239 | 7.4:-20224460 | None:intergenic |
| TGTTGTGGTTGAGAAAACTG+TGG | 0.749971 | 7.4:+20222440 | MS.gene41866:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATAATAACTAACCA+GGG | - | chr7.4:20223423-20223442 | None:intergenic | 15.0% |
| !!! | AGTTTTCATTATTTCAAAAT+TGG | + | chr7.4:20223516-20223535 | MS.gene41866:intron | 15.0% |
| !!! | ATTTTGTTAAATCATATAGA+AGG | + | chr7.4:20223217-20223236 | MS.gene41866:intron | 15.0% |
| !!! | GTTTTCATTATTTCAAAATT+GGG | + | chr7.4:20223517-20223536 | MS.gene41866:intron | 15.0% |
| !! | AAAACTTCAAGAAAGAATAA+AGG | - | chr7.4:20222933-20222952 | None:intergenic | 20.0% |
| !! | AATAATAATGCTAACTGAAA+AGG | - | chr7.4:20222910-20222929 | None:intergenic | 20.0% |
| !! | ATTCCTAATCGAATTAATTA+AGG | - | chr7.4:20224271-20224290 | None:intergenic | 20.0% |
| !! | CAAAAATATGATTCAATAAC+TGG | + | chr7.4:20222880-20222899 | MS.gene41866:intron | 20.0% |
| !! | CAATATTATAATAACTAACC+AGG | - | chr7.4:20223424-20223443 | None:intergenic | 20.0% |
| !! | TATGATTTAACAAAATTGAC+TGG | - | chr7.4:20223213-20223232 | None:intergenic | 20.0% |
| !! | TCTATATAATAAAAACGATG+TGG | + | chr7.4:20223928-20223947 | MS.gene41866:intron | 20.0% |
| !!! | TAAATCATATAGAAGGTTTT+TGG | + | chr7.4:20223224-20223243 | MS.gene41866:intron | 20.0% |
| !!! | TATATAGATGTTTTCAGAAA+TGG | - | chr7.4:20223916-20223935 | None:intergenic | 20.0% |
| ! | AAAATCAGCTTGGAAATTTA+GGG | + | chr7.4:20221809-20221828 | MS.gene41866:CDS | 25.0% |
| ! | AAGAAATAGAATGTTTACAC+TGG | + | chr7.4:20222848-20222867 | MS.gene41866:intron | 25.0% |
| ! | AGAAGAGGATGATTAAAAAT+AGG | + | chr7.4:20222472-20222491 | MS.gene41866:CDS | 25.0% |
| ! | ATATTAGCATTGCAAAACAA+TGG | - | chr7.4:20223096-20223115 | None:intergenic | 25.0% |
| ! | ATGACATATATTTGTGTGTA+TGG | + | chr7.4:20222590-20222609 | MS.gene41866:intron | 25.0% |
| ! | ATGTCACAATAAAAGCTAAA+TGG | - | chr7.4:20223327-20223346 | None:intergenic | 25.0% |
| ! | CAAAATAGAGATTCATGTTA+AGG | - | chr7.4:20222959-20222978 | None:intergenic | 25.0% |
| ! | CAACCTTAATTAATTCGATT+AGG | + | chr7.4:20224265-20224284 | MS.gene41866:intron | 25.0% |
| ! | CAGGAAAGGATAAATATTAA+TGG | - | chr7.4:20223722-20223741 | None:intergenic | 25.0% |
| ! | GAAGAGGATGATTAAAAATA+GGG | + | chr7.4:20222473-20222492 | MS.gene41866:CDS | 25.0% |
| ! | TAGTAAGAAAACTATTGATG+AGG | + | chr7.4:20221996-20222015 | MS.gene41866:CDS | 25.0% |
| !!! | TGACTTTGTTTTTCTAAAGT+TGG | + | chr7.4:20223644-20223663 | MS.gene41866:intron | 25.0% |
| !!! | TTTGTTTTGTTGAGAATTTG+TGG | + | chr7.4:20223839-20223858 | MS.gene41866:intron | 25.0% |
| AAAGCAGAGATAAATGATCA+AGG | - | chr7.4:20224163-20224182 | None:intergenic | 30.0% | |
| AACAATGTATGAAGTAGTAC+AGG | - | chr7.4:20223495-20223514 | None:intergenic | 30.0% | |
| AACTAACAAAAGCTTGTGAT+AGG | - | chr7.4:20223682-20223701 | None:intergenic | 30.0% | |
| ACTTAGAAGAAGAGAATGAA+AGG | + | chr7.4:20222660-20222679 | MS.gene41866:CDS | 30.0% | |
| AGAAAACTATTGATGAGGTT+TGG | + | chr7.4:20222001-20222020 | MS.gene41866:CDS | 30.0% | |
| AGACAGATCATAAAGCAAAA+AGG | - | chr7.4:20224024-20224043 | None:intergenic | 30.0% | |
| CAAAATCAGCTTGGAAATTT+AGG | + | chr7.4:20221808-20221827 | MS.gene41866:CDS | 30.0% | |
| CATCAGAATAATATGATGAC+TGG | + | chr7.4:20222270-20222289 | MS.gene41866:CDS | 30.0% | |
| CATTTATCTCTGCTTTATGT+AGG | + | chr7.4:20224167-20224186 | MS.gene41866:intron | 30.0% | |
| CTATACTTTATTCCTTTGTC+TGG | + | chr7.4:20222727-20222746 | MS.gene41866:intron | 30.0% | |
| GAAGTAGCTATTAAAGAAGA+CGG | - | chr7.4:20222378-20222397 | None:intergenic | 30.0% | |
| GGTTGAAATGTTAGTTAATG+AGG | + | chr7.4:20222801-20222820 | MS.gene41866:intron | 30.0% | |
| TAGTGCCAAAACAAGAAATT+AGG | - | chr7.4:20223557-20223576 | None:intergenic | 30.0% | |
| TCCAAAACAATATTCAGGAA+AGG | - | chr7.4:20223736-20223755 | None:intergenic | 30.0% | |
| ! | AAACGATGTGGTAATTTTGA+TGG | + | chr7.4:20223940-20223959 | MS.gene41866:intron | 30.0% |
| ! | ACAAGCTTTTGTTAGTTGAT+TGG | + | chr7.4:20223685-20223704 | MS.gene41866:intron | 30.0% |
| ! | TCCTTTCCTGAATATTGTTT+TGG | + | chr7.4:20223732-20223751 | MS.gene41866:intron | 30.0% |
| ! | TGTTTTCAGAAATGGAATGA+AGG | - | chr7.4:20223908-20223927 | None:intergenic | 30.0% |
| ! | TTTGCTTATTAAGCTTTGTG+TGG | + | chr7.4:20222975-20222994 | MS.gene41866:intron | 30.0% |
| !! | TAAAGTAACCTTTGAAGTCA+TGG | - | chr7.4:20223785-20223804 | None:intergenic | 30.0% |
| !! | TAGAAAGTACTCTGGTTTAA+TGG | + | chr7.4:20223614-20223633 | MS.gene41866:intron | 30.0% |
| !!! | TTCCTGAATATTGTTTTGGA+GGG | + | chr7.4:20223736-20223755 | MS.gene41866:intron | 30.0% |
| !!! | TTTCCTGAATATTGTTTTGG+AGG | + | chr7.4:20223735-20223754 | MS.gene41866:intron | 30.0% |
| ACTTCTGCATTGCATCAAAA+TGG | - | chr7.4:20223073-20223092 | None:intergenic | 35.0% | |
| AGAACAAAAGACTGGAACTT+TGG | + | chr7.4:20221744-20221763 | MS.gene41866:CDS | 35.0% | |
| AGATCAAATGAAAGCTATGC+AGG | - | chr7.4:20223396-20223415 | None:intergenic | 35.0% | |
| ATCTAGATTCATGCTTCCTA+AGG | - | chr7.4:20221839-20221858 | None:intergenic | 35.0% | |
| ATGAATCCATTGACACTTTC+TGG | + | chr7.4:20221967-20221986 | MS.gene41866:CDS | 35.0% | |
| CGAAAGTTTATGAGATACTC+TGG | + | chr7.4:20223272-20223291 | MS.gene41866:intron | 35.0% | |
| GAGTACTTTCTATCAAATGG+AGG | - | chr7.4:20223606-20223625 | None:intergenic | 35.0% | |
| GTACAATCTCACATTTGATG+AGG | + | chr7.4:20221783-20221802 | MS.gene41866:CDS | 35.0% | |
| GTAGTACAGGATTGAACAAA+AGG | - | chr7.4:20223482-20223501 | None:intergenic | 35.0% | |
| TACCCTCCAAAACAATATTC+AGG | - | chr7.4:20223741-20223760 | None:intergenic | 35.0% | |
| TAGTTAATGAGGACTTCAAC+TGG | + | chr7.4:20222812-20222831 | MS.gene41866:intron | 35.0% | |
| TCATCAGATACACAAACTCA+AGG | + | chr7.4:20222396-20222415 | MS.gene41866:CDS | 35.0% | |
| TCTAGATTCATGCTTCCTAA+GGG | - | chr7.4:20221838-20221857 | None:intergenic | 35.0% | |
| TCTTTCCAAAATGACTTCCA+TGG | - | chr7.4:20223167-20223186 | None:intergenic | 35.0% | |
| TTTCATTTGATCTTTCTCCC+TGG | + | chr7.4:20223403-20223422 | MS.gene41866:intron | 35.0% | |
| ! | AAGTTCCAGTCTTTTGTTCT+TGG | - | chr7.4:20221744-20221763 | None:intergenic | 35.0% |
| ! | CCAGAGTACTTTCTATCAAA+TGG | - | chr7.4:20223609-20223628 | None:intergenic | 35.0% |
| ! | CTGATCTCTAGAAAGTGATT+TGG | + | chr7.4:20224306-20224325 | MS.gene41866:intron | 35.0% |
| ! | TCTATTTCTTAAGCAAGCAC+CGG | - | chr7.4:20222838-20222857 | None:intergenic | 35.0% |
| ! | TTACTCTGATGTTGCTTGTT+TGG | + | chr7.4:20223123-20223142 | MS.gene41866:intron | 35.0% |
| !! | CCATTTGATAGAAAGTACTC+TGG | + | chr7.4:20223606-20223625 | MS.gene41866:intron | 35.0% |
| !! | CTGTGCCTAATTTCTTGTTT+TGG | + | chr7.4:20223549-20223568 | MS.gene41866:intron | 35.0% |
| !!! | AATATGATGACTGGTTTTGC+AGG | + | chr7.4:20222279-20222298 | MS.gene41866:CDS | 35.0% |
| !!! | AGAAGGTTTTTGGCTTTAAC+CGG | + | chr7.4:20223234-20223253 | MS.gene41866:intron | 35.0% |
| !!! | TTTTTGGCTTTAACCGGAAA+TGG | + | chr7.4:20223240-20223259 | MS.gene41866:intron | 35.0% |
| AAAAGACTGGAACTTTGGCT+AGG | + | chr7.4:20221749-20221768 | MS.gene41866:CDS | 40.0% | |
| AAAATAGGGAATCTGCAGCT+CGG | + | chr7.4:20222487-20222506 | MS.gene41866:CDS | 40.0% | |
| AAACCAGCTCAGCAATCTAA+TGG | - | chr7.4:20223456-20223475 | None:intergenic | 40.0% | |
| AAAGACTGGAACTTTGGCTA+GGG | + | chr7.4:20221750-20221769 | MS.gene41866:CDS | 40.0% | |
| AACCAGCTCAGCAATCTAAT+GGG | - | chr7.4:20223455-20223474 | None:intergenic | 40.0% | |
| AAGCTCAAACTCTATTCTCG+TGG | - | chr7.4:20223885-20223904 | None:intergenic | 40.0% | |
| AATGACTTCCATGGTTAGCA+TGG | - | chr7.4:20223158-20223177 | None:intergenic | 40.0% | |
| ACAAACTCAAGGTCGGAAAA+GGG | + | chr7.4:20222407-20222426 | MS.gene41866:CDS | 40.0% | |
| ACAAATGTCACACCAGACAA+AGG | - | chr7.4:20222742-20222761 | None:intergenic | 40.0% | |
| AGATAAACCTAGCTGGACTA+TGG | + | chr7.4:20223994-20224013 | MS.gene41866:intron | 40.0% | |
| AGGATAATGCTATGTCAGGA+AGG | + | chr7.4:20222142-20222161 | MS.gene41866:CDS | 40.0% | |
| AGTGAGGATAATGCTATGTC+AGG | + | chr7.4:20222138-20222157 | MS.gene41866:CDS | 40.0% | |
| ATGAGTTGCTGAAGAGTTTG+TGG | + | chr7.4:20221857-20221876 | MS.gene41866:CDS | 40.0% | |
| CAACAAAATACATCCCAGCA+TGG | + | chr7.4:20222183-20222202 | MS.gene41866:CDS | 40.0% | |
| CACTGAATCATTTCCTAGTG+AGG | + | chr7.4:20222122-20222141 | MS.gene41866:CDS | 40.0% | |
| CAGATACACAAACTCAAGGT+CGG | + | chr7.4:20222400-20222419 | MS.gene41866:CDS | 40.0% | |
| CATTAGTGTGCAGTTTGTCT+TGG | + | chr7.4:20224046-20224065 | MS.gene41866:intron | 40.0% | |
| CTCACTAGGAAATGATTCAG+TGG | - | chr7.4:20222124-20222143 | None:intergenic | 40.0% | |
| GAAAGTGAGATAAACCTAGC+TGG | + | chr7.4:20223987-20224006 | MS.gene41866:intron | 40.0% | |
| GACATAGCATTATCCTCACT+AGG | - | chr7.4:20222138-20222157 | None:intergenic | 40.0% | |
| GAGGATTTCTTGATGAAAGC+TGG | + | chr7.4:20222093-20222112 | MS.gene41866:CDS | 40.0% | |
| GATGAGGTTCAAAATCAGCT+TGG | + | chr7.4:20221799-20221818 | MS.gene41866:CDS | 40.0% | |
| GCAATCCAAGAACAAAAGAC+TGG | + | chr7.4:20221736-20221755 | MS.gene41866:CDS | 40.0% | |
| GGAAATTTAGGGAAACCCTT+AGG | + | chr7.4:20221820-20221839 | MS.gene41866:CDS | 40.0% | |
| GGATAATGCTATGTCAGGAA+GGG | + | chr7.4:20222143-20222162 | MS.gene41866:CDS | 40.0% | |
| GTTGCAGACATAGATAGTTC+TGG | - | chr7.4:20224249-20224268 | None:intergenic | 40.0% | |
| TGTTGTGGTTGAGAAAACTG+TGG | + | chr7.4:20222440-20222459 | MS.gene41866:CDS | 40.0% | |
| TTCGCGTAAAGATCCATTTC+CGG | - | chr7.4:20223256-20223275 | None:intergenic | 40.0% | |
| TTCTAGTGAATCCTTCATGC+AGG | + | chr7.4:20224366-20224385 | MS.gene41866:intron | 40.0% | |
| TTTCTTGATGAAAGCTGGTG+TGG | + | chr7.4:20222098-20222117 | MS.gene41866:CDS | 40.0% | |
| ! | GCTAACCATGGAAGTCATTT+TGG | + | chr7.4:20223159-20223178 | MS.gene41866:intron | 40.0% |
| ! | TACACTTGGTGAGATGACTT+TGG | + | chr7.4:20222071-20222090 | MS.gene41866:CDS | 40.0% |
| ! | TGATGCTGATGTTGTTGTTG+TGG | - | chr7.4:20222246-20222265 | None:intergenic | 40.0% |
| ! | TGTGTATGGTGTTAACGAAC+AGG | + | chr7.4:20222604-20222623 | MS.gene41866:intron | 40.0% |
| ! | TTTTGCAACCATGCTAACCA+TGG | + | chr7.4:20223147-20223166 | MS.gene41866:intron | 40.0% |
| ! | TTTTTCCTGCCATCTTGTGA+AGG | + | chr7.4:20222770-20222789 | MS.gene41866:intron | 40.0% |
| !! | AGATCACCAGAAAGTGTCAA+TGG | - | chr7.4:20221976-20221995 | None:intergenic | 40.0% |
| !! | AGTAACCTTTGAAGTCATGG+AGG | - | chr7.4:20223782-20223801 | None:intergenic | 40.0% |
| !!! | GACTGGTTTTGCAGGTTATA+TGG | + | chr7.4:20222287-20222306 | MS.gene41866:CDS | 40.0% |
| AGCTCAGCAATCTAATGGGA+TGG | - | chr7.4:20223451-20223470 | None:intergenic | 45.0% | |
| AGTGATGGTTACATGCAGCA+TGG | + | chr7.4:20221922-20221941 | MS.gene41866:CDS | 45.0% | |
| ATACATCCCAGCATGGTCAT+TGG | + | chr7.4:20222190-20222209 | MS.gene41866:CDS | 45.0% | |
| ATCCCATTAGATTGCTGAGC+TGG | + | chr7.4:20223450-20223469 | MS.gene41866:intron | 45.0% | |
| ATGCTGCATGTAACCATCAC+TGG | - | chr7.4:20221923-20221942 | None:intergenic | 45.0% | |
| CACAAACTCAAGGTCGGAAA+AGG | + | chr7.4:20222406-20222425 | MS.gene41866:CDS | 45.0% | |
| CACCATTGCTTCAGTGTATC+CGG | - | chr7.4:20222346-20222365 | None:intergenic | 45.0% | |
| CACTCATTGCCTTCACAAGA+TGG | - | chr7.4:20222782-20222801 | None:intergenic | 45.0% | |
| CATCTTGTGAAGGCAATGAG+TGG | + | chr7.4:20222780-20222799 | MS.gene41866:intron | 45.0% | |
| GATAGGAGAACAGCTACACT+TGG | + | chr7.4:20222057-20222076 | MS.gene41866:CDS | 45.0% | |
| GCTCAGCAATCTAATGGGAT+GGG | - | chr7.4:20223450-20223469 | None:intergenic | 45.0% | |
| TAATGAGGACTTCAACTGGC+CGG | + | chr7.4:20222816-20222835 | MS.gene41866:intron | 45.0% | |
| TCTCTCTATCTCCTGCATGA+AGG | - | chr7.4:20224380-20224399 | None:intergenic | 45.0% | |
| TCTGTCCTCCATGACTTCAA+AGG | + | chr7.4:20223774-20223793 | MS.gene41866:intron | 45.0% | |
| TGGTTGAGAAAACTGTGGAG+AGG | + | chr7.4:20222445-20222464 | MS.gene41866:CDS | 45.0% | |
| TTACATGCAGCATGGTCAAC+TGG | + | chr7.4:20221930-20221949 | MS.gene41866:CDS | 45.0% | |
| TTCTGCGAAGCTGATGCTTA+GGG | - | chr7.4:20224429-20224448 | None:intergenic | 45.0% | |
| TTGAGAAAACTGTGGAGAGG+AGG | + | chr7.4:20222448-20222467 | MS.gene41866:CDS | 45.0% | |
| TTTCTCAACCACAACACCAG+AGG | - | chr7.4:20222436-20222455 | None:intergenic | 45.0% | |
| ! | ACTTGGTGAGATGACTTTGG+AGG | + | chr7.4:20222074-20222093 | MS.gene41866:CDS | 45.0% |
| ! | AGGTTATATGGCTGGTCATG+TGG | + | chr7.4:20222299-20222318 | MS.gene41866:CDS | 45.0% |
| ! | GGTTTTGCAGGTTATATGGC+TGG | + | chr7.4:20222291-20222310 | MS.gene41866:CDS | 45.0% |
| ! | TGTGGTTCAACAGCCTGTTT+TGG | + | chr7.4:20222317-20222336 | MS.gene41866:CDS | 45.0% |
| !! | ACAGAAGAAGAGTGCTAGTC+AGG | + | chr7.4:20222035-20222054 | MS.gene41866:CDS | 45.0% |
| !! | AGAAGAGTGCTAGTCAGGAT+AGG | + | chr7.4:20222040-20222059 | MS.gene41866:CDS | 45.0% |
| !! | TTGGATTCTGGAACCAGTGA+TGG | + | chr7.4:20221907-20221926 | MS.gene41866:CDS | 45.0% |
| ACAGGCTTACACACAAGAGC+TGG | + | chr7.4:20222622-20222641 | MS.gene41866:intron | 50.0% | |
| ACTGCATCCAATGACCATGC+TGG | - | chr7.4:20222200-20222219 | None:intergenic | 50.0% | |
| ACTGGAACTTTGGCTAGGGA+AGG | + | chr7.4:20221754-20221773 | MS.gene41866:CDS | 50.0% | |
| AGGTACTCCATAGTCCAGCT+AGG | - | chr7.4:20224004-20224023 | None:intergenic | 50.0% | |
| CATTGCCTTCACAAGATGGC+AGG | - | chr7.4:20222778-20222797 | None:intergenic | 50.0% | |
| CTGAAGCTGCTCAAGGTTCT+GGG | + | chr7.4:20221884-20221903 | MS.gene41866:CDS | 50.0% | |
| CTGCATCCAATGACCATGCT+GGG | - | chr7.4:20222199-20222218 | None:intergenic | 50.0% | |
| GTGTATCCGGCATCCAAAAC+AGG | - | chr7.4:20222333-20222352 | None:intergenic | 50.0% | |
| GTTCTGCGAAGCTGATGCTT+AGG | - | chr7.4:20224430-20224449 | None:intergenic | 50.0% | |
| GTTGTGGTTGCTGCACTGAA+GGG | - | chr7.4:20222230-20222249 | None:intergenic | 50.0% | |
| TGCCGGATACACTGAAGCAA+TGG | + | chr7.4:20222341-20222360 | MS.gene41866:CDS | 50.0% | |
| TGTTGTGGTTGCTGCACTGA+AGG | - | chr7.4:20222231-20222250 | None:intergenic | 50.0% | |
| ! | AGCATGGTCAACTGGCTTCT+GGG | + | chr7.4:20221938-20221957 | MS.gene41866:CDS | 50.0% |
| ! | TCTGAAGCTGCTCAAGGTTC+TGG | + | chr7.4:20221883-20221902 | MS.gene41866:CDS | 50.0% |
| ! | TGGACATCTGAAGCTGCTCA+AGG | + | chr7.4:20221877-20221896 | MS.gene41866:CDS | 50.0% |
| !! | CAACAGCCTGTTTTGGATGC+CGG | + | chr7.4:20222324-20222343 | MS.gene41866:CDS | 50.0% |
| !! | CAAGGTTCTGGGTTGGATTC+TGG | + | chr7.4:20221895-20221914 | MS.gene41866:CDS | 50.0% |
| AGCTGATGCTTAGGGTCTGG+TGG | - | chr7.4:20224421-20224440 | None:intergenic | 55.0% | |
| CGAAGCTGATGCTTAGGGTC+TGG | - | chr7.4:20224424-20224443 | None:intergenic | 55.0% | |
| GTTGCTGCACTGAAGGGACT+TGG | - | chr7.4:20222224-20222243 | None:intergenic | 55.0% | |
| TGATGCTTAGGGTCTGGTGG+TGG | - | chr7.4:20224418-20224437 | None:intergenic | 55.0% | |
| ! | AAGGGTTGCCTCTGGTGTTG+TGG | + | chr7.4:20222425-20222444 | MS.gene41866:CDS | 55.0% |
| ! | CAGCATGGTCAACTGGCTTC+TGG | + | chr7.4:20221937-20221956 | MS.gene41866:CDS | 55.0% |
| !! | AGCTGCTCAAGGTTCTGGGT+TGG | + | chr7.4:20221888-20221907 | MS.gene41866:CDS | 55.0% |
| CTGTGGAGAGGAGGCAGAAG+AGG | + | chr7.4:20222457-20222476 | MS.gene41866:CDS | 60.0% | |
| GGTCGGAAAAGGGTTGCCTC+TGG | + | chr7.4:20222417-20222436 | MS.gene41866:CDS | 60.0% | |
| !! | GGGTCTGGTGGTGGCATACT+TGG | - | chr7.4:20224409-20224428 | None:intergenic | 60.0% |
| !! | TCGGTCGCGGGCTAGAAAAC+AGG | + | chr7.4:20222506-20222525 | MS.gene41866:CDS | 60.0% |
| GGAATCTGCAGCTCGGTCGC+GGG | + | chr7.4:20222494-20222513 | MS.gene41866:CDS | 65.0% | |
| GGGAATCTGCAGCTCGGTCG+CGG | + | chr7.4:20222493-20222512 | MS.gene41866:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 20221718 | 20224468 | 20221718 | ID=MS.gene41866 |
| chr7.4 | mRNA | 20221718 | 20224468 | 20221718 | ID=MS.gene41866.t1;Parent=MS.gene41866 |
| chr7.4 | exon | 20221718 | 20222527 | 20221718 | ID=MS.gene41866.t1.exon1;Parent=MS.gene41866.t1 |
| chr7.4 | CDS | 20221718 | 20222527 | 20221718 | ID=cds.MS.gene41866.t1;Parent=MS.gene41866.t1 |
| chr7.4 | exon | 20222626 | 20222697 | 20222626 | ID=MS.gene41866.t1.exon2;Parent=MS.gene41866.t1 |
| chr7.4 | CDS | 20222626 | 20222697 | 20222626 | ID=cds.MS.gene41866.t1;Parent=MS.gene41866.t1 |
| chr7.4 | exon | 20224388 | 20224468 | 20224388 | ID=MS.gene41866.t1.exon3;Parent=MS.gene41866.t1 |
| chr7.4 | CDS | 20224388 | 20224468 | 20224388 | ID=cds.MS.gene41866.t1;Parent=MS.gene41866.t1 |
| Gene Sequence |
| Protein sequence |
