Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62322.t1 | XP_003618910.1 | 85.8 | 324 | 41 | 4 | 1 | 322 | 1 | 321 | 4.30E-126 | 461.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62322.t1 | Q9LES3 | 54.3 | 324 | 119 | 7 | 1 | 322 | 1 | 297 | 9.2e-69 | 261.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62322.t1 | G7KP64 | 85.8 | 324 | 41 | 4 | 1 | 322 | 1 | 321 | 3.1e-126 | 461.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62322.t1 | TF | bZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049350 | MS.gene62322 | 0.814807 | 1.28E-51 | -1.69E-46 |
MS.gene049711 | MS.gene62322 | 0.803368 | 3.60E-49 | -1.69E-46 |
MS.gene049807 | MS.gene62322 | 0.817168 | 3.79E-52 | -1.69E-46 |
MS.gene049808 | MS.gene62322 | 0.81327 | 2.79E-51 | -1.69E-46 |
MS.gene049824 | MS.gene62322 | 0.816381 | 5.69E-52 | -1.69E-46 |
MS.gene049825 | MS.gene62322 | 0.820932 | 5.28E-53 | -1.69E-46 |
MS.gene050807 | MS.gene62322 | 0.821843 | 3.26E-53 | -1.69E-46 |
MS.gene051719 | MS.gene62322 | 0.809461 | 1.87E-50 | -1.69E-46 |
MS.gene051720 | MS.gene62322 | 0.807502 | 4.90E-50 | -1.69E-46 |
MS.gene052516 | MS.gene62322 | 0.820377 | 7.09E-53 | -1.69E-46 |
MS.gene052947 | MS.gene62322 | 0.812498 | 4.11E-51 | -1.69E-46 |
MS.gene053144 | MS.gene62322 | 0.831243 | 1.86E-55 | -1.69E-46 |
MS.gene053581 | MS.gene62322 | 0.818434 | 1.96E-52 | -1.69E-46 |
MS.gene053599 | MS.gene62322 | 0.800374 | 1.48E-48 | -1.69E-46 |
MS.gene054584 | MS.gene62322 | 0.817055 | 4.02E-52 | -1.69E-46 |
MS.gene055465 | MS.gene62322 | 0.811147 | 8.10E-51 | -1.69E-46 |
MS.gene055468 | MS.gene62322 | 0.813812 | 2.12E-51 | -1.69E-46 |
MS.gene055512 | MS.gene62322 | 0.814943 | 1.19E-51 | -1.69E-46 |
MS.gene055580 | MS.gene62322 | -0.839067 | 1.98E-57 | -1.69E-46 |
MS.gene055891 | MS.gene62322 | 0.828192 | 1.03E-54 | -1.69E-46 |
MS.gene056005 | MS.gene62322 | 0.819465 | 1.15E-52 | -1.69E-46 |
MS.gene056043 | MS.gene62322 | -0.836738 | 7.85E-57 | -1.69E-46 |
MS.gene056075 | MS.gene62322 | 0.813968 | 1.96E-51 | -1.69E-46 |
MS.gene057705 | MS.gene62322 | 0.825601 | 4.29E-54 | -1.69E-46 |
MS.gene058852 | MS.gene62322 | 0.811311 | 7.46E-51 | -1.69E-46 |
MS.gene060194 | MS.gene62322 | 0.814236 | 1.71E-51 | -1.69E-46 |
MS.gene060587 | MS.gene62322 | 0.825108 | 5.61E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene62322 | MS.gene013906 | PPI |
MS.gene62322 | MS.gene068056 | PPI |
MS.gene55561 | MS.gene62322 | PPI |
MS.gene62322 | MS.gene55561 | PPI |
MS.gene013906 | MS.gene62322 | PPI |
MS.gene41906 | MS.gene62322 | PPI |
MS.gene62322 | MS.gene83996 | PPI |
MS.gene62322 | MS.gene41866 | PPI |
MS.gene62322 | MS.gene47208 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62322.t1 | MTR_6g026800 | 93.827 | 324 | 15 | 4 | 1 | 322 | 1 | 321 | 0.0 | 567 |
MS.gene62322.t1 | MTR_7g088090 | 62.840 | 331 | 103 | 9 | 1 | 322 | 1 | 320 | 4.19e-124 | 358 |
MS.gene62322.t1 | MTR_3g010660 | 48.810 | 336 | 144 | 8 | 1 | 322 | 1 | 322 | 3.53e-91 | 275 |
MS.gene62322.t1 | MTR_8g043960 | 50.489 | 307 | 135 | 5 | 16 | 322 | 24 | 313 | 7.86e-91 | 273 |
MS.gene62322.t1 | MTR_4g085910 | 35.312 | 337 | 152 | 8 | 16 | 295 | 18 | 345 | 1.04e-44 | 157 |
MS.gene62322.t1 | MTR_3g101780 | 47.097 | 155 | 68 | 5 | 2 | 156 | 14 | 154 | 4.18e-30 | 119 |
MS.gene62322.t1 | MTR_3g101780 | 65.574 | 61 | 20 | 1 | 237 | 297 | 339 | 398 | 2.09e-16 | 79.7 |
MS.gene62322.t1 | MTR_2g086390 | 33.893 | 298 | 138 | 12 | 20 | 302 | 12 | 265 | 1.58e-29 | 114 |
MS.gene62322.t1 | MTR_2g086390 | 33.916 | 286 | 134 | 11 | 20 | 294 | 12 | 253 | 2.54e-29 | 114 |
MS.gene62322.t1 | MTR_2g086340 | 36.986 | 292 | 140 | 11 | 17 | 294 | 23 | 284 | 4.18e-28 | 111 |
MS.gene62322.t1 | MTR_5g088230 | 44.828 | 145 | 70 | 3 | 1 | 143 | 6 | 142 | 2.52e-24 | 100 |
MS.gene62322.t1 | MTR_5g088230 | 54.023 | 87 | 39 | 1 | 236 | 322 | 184 | 269 | 1.51e-18 | 84.3 |
MS.gene62322.t1 | MTR_5g088230 | 44.828 | 145 | 70 | 3 | 1 | 143 | 1 | 137 | 2.59e-24 | 100 |
MS.gene62322.t1 | MTR_5g088230 | 54.023 | 87 | 39 | 1 | 236 | 322 | 179 | 264 | 1.61e-18 | 84.0 |
MS.gene62322.t1 | MTR_7g104480 | 38.060 | 134 | 72 | 2 | 22 | 144 | 45 | 178 | 3.06e-19 | 88.2 |
MS.gene62322.t1 | MTR_5g060990 | 26.599 | 297 | 169 | 8 | 16 | 273 | 12 | 298 | 7.52e-17 | 80.1 |
MS.gene62322.t1 | MTR_7g015990 | 69.091 | 55 | 14 | 1 | 251 | 302 | 120 | 174 | 1.13e-13 | 68.9 |
MS.gene62322.t1 | MTR_8g075130 | 59.649 | 57 | 20 | 1 | 245 | 298 | 99 | 155 | 1.49e-12 | 65.5 |
MS.gene62322.t1 | MTR_5g022780 | 64.912 | 57 | 8 | 1 | 251 | 295 | 166 | 222 | 3.54e-12 | 65.9 |
MS.gene62322.t1 | MTR_4g094390 | 54.098 | 61 | 27 | 1 | 235 | 295 | 115 | 174 | 9.11e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62322.t1 | AT3G56850 | 58.025 | 324 | 107 | 7 | 1 | 322 | 1 | 297 | 1.22e-109 | 321 |
MS.gene62322.t1 | AT2G41070 | 49.536 | 323 | 101 | 8 | 1 | 322 | 10 | 271 | 1.62e-82 | 251 |
MS.gene62322.t1 | AT2G41070 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.99e-82 | 250 |
MS.gene62322.t1 | AT2G41070 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.99e-82 | 250 |
MS.gene62322.t1 | AT2G41070 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.99e-82 | 250 |
MS.gene62322.t1 | AT2G41070 | 48.475 | 295 | 90 | 8 | 1 | 294 | 1 | 234 | 1.01e-68 | 215 |
MS.gene62322.t1 | AT3G44460 | 38.721 | 297 | 124 | 11 | 15 | 293 | 34 | 290 | 1.40e-30 | 118 |
MS.gene62322.t1 | AT1G49720 | 51.748 | 143 | 55 | 5 | 9 | 144 | 18 | 153 | 3.83e-30 | 118 |
MS.gene62322.t1 | AT1G49720 | 61.194 | 67 | 24 | 2 | 235 | 300 | 297 | 362 | 2.99e-13 | 70.5 |
MS.gene62322.t1 | AT1G49720 | 49.660 | 147 | 62 | 4 | 5 | 144 | 12 | 153 | 3.90e-30 | 118 |
MS.gene62322.t1 | AT1G49720 | 54.348 | 92 | 32 | 4 | 235 | 317 | 297 | 387 | 6.37e-14 | 72.4 |
MS.gene62322.t1 | AT1G49720 | 49.660 | 147 | 62 | 4 | 5 | 144 | 12 | 153 | 3.90e-30 | 118 |
MS.gene62322.t1 | AT1G49720 | 54.348 | 92 | 32 | 4 | 235 | 317 | 297 | 387 | 6.37e-14 | 72.4 |
MS.gene62322.t1 | AT3G19290 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 6.08e-28 | 112 |
MS.gene62322.t1 | AT3G19290 | 47.126 | 87 | 43 | 1 | 212 | 295 | 310 | 396 | 3.33e-13 | 70.1 |
MS.gene62322.t1 | AT3G19290 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 7.42e-28 | 112 |
MS.gene62322.t1 | AT3G19290 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.20e-28 | 112 |
MS.gene62322.t1 | AT3G19290 | 42.373 | 118 | 55 | 3 | 212 | 317 | 310 | 426 | 4.36e-13 | 70.1 |
MS.gene62322.t1 | AT3G19290 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.20e-28 | 112 |
MS.gene62322.t1 | AT3G19290 | 42.373 | 118 | 55 | 3 | 212 | 317 | 310 | 426 | 4.36e-13 | 70.1 |
MS.gene62322.t1 | AT3G19290 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.29e-28 | 112 |
MS.gene62322.t1 | AT3G19290 | 42.373 | 118 | 56 | 2 | 212 | 317 | 310 | 427 | 1.76e-13 | 71.2 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 3.35e-21 | 93.6 |
MS.gene62322.t1 | AT1G45249 | 49.558 | 113 | 42 | 4 | 218 | 322 | 311 | 416 | 1.85e-17 | 82.8 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 4.17e-21 | 93.6 |
MS.gene62322.t1 | AT1G45249 | 45.161 | 124 | 42 | 5 | 218 | 322 | 311 | 427 | 1.19e-14 | 74.7 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 36 | 192 | 4.20e-21 | 93.6 |
MS.gene62322.t1 | AT1G45249 | 49.558 | 113 | 42 | 4 | 218 | 322 | 326 | 431 | 2.18e-17 | 82.8 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 36 | 192 | 4.20e-21 | 93.6 |
MS.gene62322.t1 | AT1G45249 | 49.558 | 113 | 42 | 4 | 218 | 322 | 326 | 431 | 2.18e-17 | 82.8 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 4.92e-21 | 92.8 |
MS.gene62322.t1 | AT1G45249 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 4.92e-21 | 92.8 |
MS.gene62322.t1 | AT1G45249 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.14e-21 | 92.8 |
MS.gene62322.t1 | AT1G45249 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.14e-21 | 92.8 |
MS.gene62322.t1 | AT1G45249 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.14e-21 | 92.8 |
MS.gene62322.t1 | AT1G45249 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.14e-21 | 92.8 |
MS.gene62322.t1 | AT4G34000 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 1.92e-20 | 92.0 |
MS.gene62322.t1 | AT4G34000 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 8.61e-18 | 84.0 |
MS.gene62322.t1 | AT4G34000 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 1.92e-20 | 92.0 |
MS.gene62322.t1 | AT4G34000 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 8.61e-18 | 84.0 |
MS.gene62322.t1 | AT4G34000 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 1.92e-20 | 92.0 |
MS.gene62322.t1 | AT4G34000 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 8.61e-18 | 84.0 |
MS.gene62322.t1 | AT4G34000 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 2.09e-20 | 91.7 |
MS.gene62322.t1 | AT4G34000 | 55.000 | 80 | 27 | 2 | 216 | 295 | 347 | 417 | 7.35e-18 | 84.3 |
MS.gene62322.t1 | AT2G36270 | 55.556 | 90 | 29 | 2 | 236 | 315 | 342 | 430 | 2.27e-16 | 79.7 |
MS.gene62322.t1 | AT2G36270 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 6.82e-16 | 78.6 |
MS.gene62322.t1 | AT2G36270 | 55.556 | 90 | 29 | 2 | 236 | 315 | 342 | 430 | 2.27e-16 | 79.7 |
MS.gene62322.t1 | AT2G36270 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 6.82e-16 | 78.6 |
MS.gene62322.t1 | AT4G35900 | 50.000 | 94 | 44 | 2 | 229 | 322 | 195 | 285 | 3.12e-16 | 78.2 |
MS.gene62322.t1 | AT2G36270 | 70.690 | 58 | 16 | 1 | 236 | 293 | 342 | 398 | 5.59e-16 | 78.6 |
MS.gene62322.t1 | AT2G36270 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 1.15e-15 | 77.8 |
MS.gene62322.t1 | AT5G44080 | 31.799 | 239 | 100 | 10 | 98 | 319 | 120 | 312 | 1.03e-15 | 77.0 |
MS.gene62322.t1 | AT2G17770 | 54.167 | 72 | 32 | 1 | 251 | 322 | 125 | 195 | 1.72e-14 | 71.2 |
MS.gene62322.t1 | AT5G42910 | 38.636 | 132 | 54 | 3 | 16 | 143 | 20 | 128 | 1.78e-14 | 73.9 |
MS.gene62322.t1 | AT1G03970 | 28.632 | 234 | 104 | 9 | 98 | 319 | 85 | 267 | 2.32e-12 | 66.6 |
Find 73 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAACCATCTTGGTAATTT+AGG | 0.046059 | 6.1:+8518831 | MS.gene62322:CDS |
GATATCGCCATCTTCTTTAA+TGG | 0.187061 | 6.1:+8519397 | MS.gene62322:CDS |
CACAAACACTAGGTCGAAAA+AGG | 0.215282 | 6.1:+8519963 | MS.gene62322:CDS |
AAAACCATCTTGGTAATTTA+GGG | 0.238621 | 6.1:+8518832 | MS.gene62322:CDS |
GCTGGCGAGGTTTCGGATTT+CGG | 0.287074 | 6.1:+8518912 | MS.gene62322:CDS |
GATGACTTTGGAGGATTTCT+TGG | 0.296873 | 6.1:+8519127 | MS.gene62322:CDS |
GGAAGAAGAGGGGTGTTGAT+AGG | 0.304171 | 6.1:+8519066 | MS.gene62322:CDS |
CAAGGGAGTTTAACTTTGTC+TGG | 0.325021 | 6.1:+8518996 | MS.gene62322:CDS |
TGTTGAAGCTGGCGAGGTTT+CGG | 0.333824 | 6.1:+8518905 | MS.gene62322:CDS |
GGTTGCCGGGAATCAAGTTT+TGG | 0.343807 | 6.1:+8519367 | MS.gene62322:CDS |
TTTCGCAACATGGTCTTCAT+TGG | 0.353409 | 6.1:+8519243 | MS.gene62322:CDS |
ATATCGCCATCTTCTTTAAT+GGG | 0.357518 | 6.1:+8519398 | MS.gene62322:CDS |
AGGATGATGGTGGTTTGTTA+AGG | 0.362877 | 6.1:+8519189 | MS.gene62322:CDS |
CAAAGACTTTACCTTTATCT+AGG | 0.373965 | 6.1:+8518772 | MS.gene62322:CDS |
TGCATCCAAAACTTGATTCC+CGG | 0.395693 | 6.1:-8519372 | None:intergenic |
GGCTCGGGTGGTGGCGCAGT+TGG | 0.406451 | 6.1:-8521633 | None:intergenic |
GAGGATTTCTTGGTGAAAGC+TGG | 0.421412 | 6.1:+8519137 | MS.gene62322:CDS |
GGATGATGGTGGTTTGTTAA+GGG | 0.422756 | 6.1:+8519190 | MS.gene62322:CDS |
GAAGAAGAGGGGTGTTGATA+GGG | 0.424019 | 6.1:+8519067 | MS.gene62322:CDS |
ACTTTACCTTTATCTAGGTC+AGG | 0.424724 | 6.1:+8518777 | MS.gene62322:CDS |
AAAGATCCTGACCTAGATAA+AGG | 0.429936 | 6.1:-8518783 | None:intergenic |
TGATTCCCGGCAACCTGAAA+AGG | 0.430801 | 6.1:-8519359 | None:intergenic |
GATGAAGTTCAAAACCATCT+TGG | 0.441683 | 6.1:+8518822 | MS.gene62322:CDS |
TTGGTGAAAGCTGGAGTTGT+TGG | 0.447659 | 6.1:+8519146 | MS.gene62322:CDS |
TTTCATAACAATAAGGATGA+TGG | 0.459884 | 6.1:+8519176 | MS.gene62322:CDS |
GCAGGCTTATACACAAGAAC+TGG | 0.460547 | 6.1:+8520185 | MS.gene62322:intron |
TTGATTCGAATGAGGATTCT+CGG | 0.469255 | 6.1:+8519213 | MS.gene62322:CDS |
CGGCATAATGTTTCGCAACA+TGG | 0.481536 | 6.1:+8519233 | MS.gene62322:CDS |
AGTGATGTTGCTGCTGCTGC+TGG | 0.483550 | 6.1:+8518939 | MS.gene62322:CDS |
TCTTCATTGGATGCAATATC+CGG | 0.491078 | 6.1:+8519256 | MS.gene62322:CDS |
GACACTTGGTGAGATGACTT+TGG | 0.498834 | 6.1:+8519115 | MS.gene62322:CDS |
GTTTCCCTAAATTACCAAGA+TGG | 0.502080 | 6.1:-8518836 | None:intergenic |
GTTGCAATGAAGACATCAAA+AGG | 0.505109 | 6.1:-8521688 | None:intergenic |
CAACTTGGTTTGAGTTCACA+AGG | 0.505242 | 6.1:+8518978 | MS.gene62322:CDS |
CTGTCGAGAGGAGGCAAAAG+AGG | 0.507973 | 6.1:+8520014 | MS.gene62322:CDS |
AGAGGGGTGTTGATAGGGAT+AGG | 0.509576 | 6.1:+8519072 | MS.gene62322:CDS |
GTAGTACCCATTAAAGAAGA+TGG | 0.510152 | 6.1:-8519404 | None:intergenic |
GCATGAACTGCCGCAAAACC+CGG | 0.510299 | 6.1:-8519326 | None:intergenic |
GTATGAAAAGCATATGATGC+CGG | 0.511392 | 6.1:+8519307 | MS.gene62322:CDS |
GTTAAGGGTTGATTCGAATG+AGG | 0.514656 | 6.1:+8519205 | MS.gene62322:CDS |
TAAAGTTTCGCGTTTAGAAG+AGG | 0.534492 | 6.1:+8520212 | MS.gene62322:CDS |
AACCTGAAAAGGCTGTTGAA+TGG | 0.537317 | 6.1:-8519348 | None:intergenic |
AGATATGCAAGGGAAGAAGA+GGG | 0.542486 | 6.1:+8519055 | MS.gene62322:CDS |
AAGATATGCAAGGGAAGAAG+AGG | 0.548251 | 6.1:+8519054 | MS.gene62322:CDS |
ACTTGGTGAGATGACTTTGG+AGG | 0.554555 | 6.1:+8519118 | MS.gene62322:CDS |
GTTGTCACAGGAGATAGAGA+AGG | 0.566153 | 6.1:+8521605 | MS.gene62322:intron |
AACATACAGCATAATCAACT+TGG | 0.566933 | 6.1:+8518963 | MS.gene62322:CDS |
CATAACAATAAGGATGATGG+TGG | 0.567397 | 6.1:+8519179 | MS.gene62322:CDS |
TATGAAAAGCATATGATGCC+GGG | 0.578298 | 6.1:+8519308 | MS.gene62322:CDS |
GTTGTTGCTGCTGAACAGAA+TGG | 0.584868 | 6.1:-8519280 | None:intergenic |
GGTAATTTAGGGAAACCACT+TGG | 0.595722 | 6.1:+8518843 | MS.gene62322:CDS |
TCGTTCACGAGCAAGAAGAC+AGG | 0.598431 | 6.1:+8520063 | MS.gene62322:CDS |
TAGTAAGAAAACTGTTGATG+AGG | 0.605589 | 6.1:+8519025 | MS.gene62322:CDS |
AGAAAACTGTTGATGAGGTG+TGG | 0.606026 | 6.1:+8519030 | MS.gene62322:CDS |
AGGTGTGGAAAGATATGCAA+GGG | 0.611551 | 6.1:+8519045 | MS.gene62322:CDS |
GATATGCAAGGGAAGAAGAG+GGG | 0.613310 | 6.1:+8519056 | MS.gene62322:CDS |
AGTGTGTGGAGTGTTGAAGC+TGG | 0.616392 | 6.1:+8518894 | MS.gene62322:CDS |
ATGAGTTGCTTAAGAGTGTG+TGG | 0.618901 | 6.1:+8518880 | MS.gene62322:CDS |
TAGAGAAAACTGTCGAGAGG+AGG | 0.623550 | 6.1:+8520005 | MS.gene62322:CDS |
TGCTGCTGAACAGAATGGAC+CGG | 0.626230 | 6.1:-8519275 | None:intergenic |
GAAGAAGAAATGGGGTCACA+AGG | 0.627188 | 6.1:+8518732 | None:intergenic |
TAGTAGAGAAAACTGTCGAG+AGG | 0.627657 | 6.1:+8520002 | MS.gene62322:CDS |
GTCACAGGAGATAGAGAAGG+AGG | 0.631775 | 6.1:+8521608 | MS.gene62322:intron |
TTTCTCTACTAAAATACCAG+AGG | 0.634525 | 6.1:-8519990 | None:intergenic |
GTGGAGTGTTGAAGCTGGCG+AGG | 0.635886 | 6.1:+8518899 | MS.gene62322:CDS |
TCAAGATTCATACTTCCAAG+TGG | 0.648117 | 6.1:-8518858 | None:intergenic |
GTTTAGAAGAGGAAAATGAA+AGG | 0.656611 | 6.1:+8520223 | MS.gene62322:CDS |
TTATCAGATACACAAACACT+AGG | 0.668593 | 6.1:+8519953 | MS.gene62322:CDS |
GAAGAAATGGGGTCACAAGG+TGG | 0.673383 | 6.1:+8518735 | None:intergenic |
AACTTGGTTTGAGTTCACAA+GGG | 0.674938 | 6.1:+8518979 | MS.gene62322:CDS |
GGCGAGGTTTCGGATTTCGG+CGG | 0.691722 | 6.1:+8518915 | MS.gene62322:CDS |
AGGATGCTGAATTAGTTCTG+CGG | 0.716972 | 6.1:-8521668 | None:intergenic |
GAGGTGTGGAAAGATATGCA+AGG | 0.743009 | 6.1:+8519044 | MS.gene62322:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATAAAAAAAGATGAAATA+AGG | + | chr6.1:8519623-8519642 | MS.gene62322:intron | 15.0% |
!! | GTTATTATCAATAATATTCT+AGG | + | chr6.1:8519895-8519914 | MS.gene62322:intron | 15.0% |
!! | TTATAGATATATATCTTCAA+GGG | - | chr6.1:8521000-8521019 | None:intergenic | 15.0% |
!!! | AAGTAAAAAGAAAATTTTCT+TGG | + | chr6.1:8520397-8520416 | MS.gene62322:intron | 15.0% |
!!! | AGAATATTATTGATAATAAC+TGG | - | chr6.1:8519895-8519914 | None:intergenic | 15.0% |
!!! | AGTAAAAAGAAAATTTTCTT+GGG | + | chr6.1:8520398-8520417 | MS.gene62322:intron | 15.0% |
!!! | ATTACTTTTGAATATTGAAT+CGG | - | chr6.1:8520763-8520782 | None:intergenic | 15.0% |
!!! | TAAAGATTTTATATTTCCTT+TGG | + | chr6.1:8520574-8520593 | MS.gene62322:intron | 15.0% |
!! | AAAAGAATACATATTCATGA+AGG | - | chr6.1:8520274-8520293 | None:intergenic | 20.0% |
!! | AAAAGAGGATGATAAAAAAT+AGG | + | chr6.1:8520029-8520048 | MS.gene62322:CDS | 20.0% |
!! | AAAATAGAGTTATATAGCTT+AGG | - | chr6.1:8521316-8521335 | None:intergenic | 20.0% |
!! | AAAGAGGATGATAAAAAATA+GGG | + | chr6.1:8520030-8520049 | MS.gene62322:CDS | 20.0% |
!! | CCTTCAAAAAAAAAAACTTA+GGG | - | chr6.1:8519825-8519844 | None:intergenic | 20.0% |
!! | GTTATAGATATATATCTTCA+AGG | - | chr6.1:8521001-8521020 | None:intergenic | 20.0% |
!! | TCCTTCAAAAAAAAAAACTT+AGG | - | chr6.1:8519826-8519845 | None:intergenic | 20.0% |
!!! | AAGCTATATAACTCTATTTT+AGG | + | chr6.1:8521316-8521335 | MS.gene62322:intron | 20.0% |
!!! | AGCTTTATACAAAAGATTAA+GGG | - | chr6.1:8519856-8519875 | None:intergenic | 20.0% |
!!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr6.1:8519564-8519583 | None:intergenic | 20.0% |
!!! | CTATAACTTTCTAAGATATT+AGG | - | chr6.1:8520541-8520560 | None:intergenic | 20.0% |
!!! | CTATCTAGAATGATATTTTA+TGG | - | chr6.1:8521558-8521577 | None:intergenic | 20.0% |
!!! | TGAATCTTTTCATAACAATA+AGG | + | chr6.1:8519169-8519188 | MS.gene62322:CDS | 20.0% |
!!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr6.1:8519563-8519582 | None:intergenic | 20.0% |
!!! | TTTCTTGTTTGTTGATTTTT+CGG | + | chr6.1:8521183-8521202 | MS.gene62322:intron | 20.0% |
!!! | TTTCTTTTCGATAAAATTCT+AGG | + | chr6.1:8521446-8521465 | MS.gene62322:intron | 20.0% |
! | AGACTCAAACCTAAATAAAA+GGG | - | chr6.1:8519534-8519553 | None:intergenic | 25.0% |
! | CTTGTTAAGGATTCAAAAAA+TGG | - | chr6.1:8520922-8520941 | None:intergenic | 25.0% |
! | GTATTAAGGAAATATCAACA+TGG | - | chr6.1:8520507-8520526 | None:intergenic | 25.0% |
! | TAAATAAACAAACCAACCAA+AGG | - | chr6.1:8520593-8520612 | None:intergenic | 25.0% |
! | TAGACTCAAACCTAAATAAA+AGG | - | chr6.1:8519535-8519554 | None:intergenic | 25.0% |
! | TCAAACCAAAAAAAACAAAC+AGG | - | chr6.1:8520133-8520152 | None:intergenic | 25.0% |
! | TTAAAATGGAAACTTTGTCT+TGG | + | chr6.1:8520828-8520847 | MS.gene62322:intron | 25.0% |
! | TTTCATAACAATAAGGATGA+TGG | + | chr6.1:8519176-8519195 | MS.gene62322:CDS | 25.0% |
!! | AAAACCATCTTGGTAATTTA+GGG | + | chr6.1:8518832-8518851 | MS.gene62322:CDS | 25.0% |
!! | CAGCTTTATACAAAAGATTA+AGG | - | chr6.1:8519857-8519876 | None:intergenic | 25.0% |
!! | GATTTTATATTTCCTTTGGT+TGG | + | chr6.1:8520578-8520597 | MS.gene62322:intron | 25.0% |
!! | TACTTAAGAGCATAAAACTT+AGG | + | chr6.1:8521241-8521260 | MS.gene62322:intron | 25.0% |
!! | TTACTTTATTTCCTACTACT+AGG | + | chr6.1:8519480-8519499 | MS.gene62322:intron | 25.0% |
!!! | ATAACTCTATTTTAGGCTTT+TGG | + | chr6.1:8521323-8521342 | MS.gene62322:intron | 25.0% |
!!! | CCCTAAGTTTTTTTTTTTGA+AGG | + | chr6.1:8519822-8519841 | MS.gene62322:intron | 25.0% |
!!! | TAGTTTGTAACTTTTGTTAG+AGG | + | chr6.1:8521474-8521493 | MS.gene62322:intron | 25.0% |
!!! | TTCTTGTTTGTTGATTTTTC+GGG | + | chr6.1:8521184-8521203 | MS.gene62322:intron | 25.0% |
AACATACAGCATAATCAACT+TGG | + | chr6.1:8518963-8518982 | MS.gene62322:CDS | 30.0% | |
ACCTAAATAAAAGGGAAATC+AGG | - | chr6.1:8519526-8519545 | None:intergenic | 30.0% | |
AGGCATATCGATAAGTATTA+AGG | - | chr6.1:8520521-8520540 | None:intergenic | 30.0% | |
ATATCGCCATCTTCTTTAAT+GGG | + | chr6.1:8519398-8519417 | MS.gene62322:CDS | 30.0% | |
CAAAGACTTTACCTTTATCT+AGG | + | chr6.1:8518772-8518791 | MS.gene62322:CDS | 30.0% | |
CAGCTTATATGAAAACAGAA+TGG | - | chr6.1:8519649-8519668 | None:intergenic | 30.0% | |
GAAAAACAACAGTAGTTAGT+AGG | - | chr6.1:8521167-8521186 | None:intergenic | 30.0% | |
GTTTAGAAGAGGAAAATGAA+AGG | + | chr6.1:8520223-8520242 | MS.gene62322:CDS | 30.0% | |
GTTTGTTTATTTAGACAGAG+TGG | + | chr6.1:8520600-8520619 | MS.gene62322:intron | 30.0% | |
TAGTAAGAAAACTGTTGATG+AGG | + | chr6.1:8519025-8519044 | MS.gene62322:CDS | 30.0% | |
TTATCAGATACACAAACACT+AGG | + | chr6.1:8519953-8519972 | MS.gene62322:CDS | 30.0% | |
TTTCTCTACTAAAATACCAG+AGG | - | chr6.1:8519993-8520012 | None:intergenic | 30.0% | |
! | AAGCATTTGTGAGAATGTTT+TGG | - | chr6.1:8519762-8519781 | None:intergenic | 30.0% |
! | CAAAACCATCTTGGTAATTT+AGG | + | chr6.1:8518831-8518850 | MS.gene62322:CDS | 30.0% |
! | GAGCATAAAACTTAGGTTTT+TGG | + | chr6.1:8521248-8521267 | MS.gene62322:intron | 30.0% |
! | GTTTTCTGTAATGCATCAAT+TGG | - | chr6.1:8520474-8520493 | None:intergenic | 30.0% |
!! | TCCTGATTTCCCTTTTATTT+AGG | + | chr6.1:8519522-8519541 | MS.gene62322:intron | 30.0% |
!!! | GAAGTCCTGTTTGTTTTTTT+TGG | + | chr6.1:8520125-8520144 | MS.gene62322:intron | 30.0% |
!!! | TGTTGATTTTTCGGGATAAT+TGG | + | chr6.1:8521192-8521211 | MS.gene62322:intron | 30.0% |
AAAGATCCTGACCTAGATAA+AGG | - | chr6.1:8518786-8518805 | None:intergenic | 35.0% | |
AAATATCAACATGGCCAAAG+TGG | - | chr6.1:8520498-8520517 | None:intergenic | 35.0% | |
ACAAACACTAGGTCGAAAAA+GGG | + | chr6.1:8519964-8519983 | MS.gene62322:CDS | 35.0% | |
ACTTTACCTTTATCTAGGTC+AGG | + | chr6.1:8518777-8518796 | MS.gene62322:CDS | 35.0% | |
AGATAGTTCATCTCTACTCA+CGG | + | chr6.1:8521572-8521591 | MS.gene62322:intron | 35.0% | |
AGGGGTTAAGAGGTTTAAAA+TGG | + | chr6.1:8520814-8520833 | MS.gene62322:intron | 35.0% | |
CACTAATCAAAGTGAGACTT+GGG | + | chr6.1:8521420-8521439 | MS.gene62322:intron | 35.0% | |
CATTACAGAAAACTCCACTT+TGG | + | chr6.1:8520481-8520500 | MS.gene62322:intron | 35.0% | |
CTCTTAAGTAGAGACATGAA+TGG | - | chr6.1:8521231-8521250 | None:intergenic | 35.0% | |
GATATCGCCATCTTCTTTAA+TGG | + | chr6.1:8519397-8519416 | MS.gene62322:CDS | 35.0% | |
GATGAAGTTCAAAACCATCT+TGG | + | chr6.1:8518822-8518841 | MS.gene62322:CDS | 35.0% | |
GGGAAATCAGGAAAAGAATA+AGG | - | chr6.1:8519514-8519533 | None:intergenic | 35.0% | |
GTAGTACCCATTAAAGAAGA+TGG | - | chr6.1:8519407-8519426 | None:intergenic | 35.0% | |
GTTTATTTAGACAGAGTGGT+TGG | + | chr6.1:8520604-8520623 | MS.gene62322:intron | 35.0% | |
GTTTCCCTAAATTACCAAGA+TGG | - | chr6.1:8518839-8518858 | None:intergenic | 35.0% | |
TAAAGTTTCGCGTTTAGAAG+AGG | + | chr6.1:8520212-8520231 | MS.gene62322:CDS | 35.0% | |
TACCAATAACATGTCGTCTA+TGG | + | chr6.1:8521097-8521116 | MS.gene62322:intron | 35.0% | |
TATAAGCCTGCACATTTCAT+TGG | - | chr6.1:8520176-8520195 | None:intergenic | 35.0% | |
TCAAGATTCATACTTCCAAG+TGG | - | chr6.1:8518861-8518880 | None:intergenic | 35.0% | |
TCACTAATCAAAGTGAGACT+TGG | + | chr6.1:8521419-8521438 | MS.gene62322:intron | 35.0% | |
TCTTCATTGGATGCAATATC+CGG | + | chr6.1:8519256-8519275 | MS.gene62322:CDS | 35.0% | |
TGAGTCTATGTATCCCTATT+TGG | + | chr6.1:8519547-8519566 | MS.gene62322:intron | 35.0% | |
TGCACATTTCATTGGCATAT+GGG | - | chr6.1:8520168-8520187 | None:intergenic | 35.0% | |
TTAAACCTCTTAACCCCTAA+GGG | - | chr6.1:8520812-8520831 | None:intergenic | 35.0% | |
TTAACACAACCCTACAAAAC+CGG | + | chr6.1:8521272-8521291 | MS.gene62322:intron | 35.0% | |
TTCATCAAACTGTAAGACCT+CGG | + | chr6.1:8521042-8521061 | MS.gene62322:intron | 35.0% | |
TTTAAACCTCTTAACCCCTA+AGG | - | chr6.1:8520813-8520832 | None:intergenic | 35.0% | |
! | AACTTGGTTTGAGTTCACAA+GGG | + | chr6.1:8518979-8518998 | MS.gene62322:CDS | 35.0% |
! | CATAACAATAAGGATGATGG+TGG | + | chr6.1:8519179-8519198 | MS.gene62322:CDS | 35.0% |
! | GTATGAAAAGCATATGATGC+CGG | + | chr6.1:8519307-8519326 | MS.gene62322:CDS | 35.0% |
! | GTTATACTCTTTTCTCTGTG+AGG | + | chr6.1:8520085-8520104 | MS.gene62322:intron | 35.0% |
! | TATGAAAAGCATATGATGCC+GGG | + | chr6.1:8519308-8519327 | MS.gene62322:CDS | 35.0% |
! | TCTGATAATGTACCTGTTGA+AGG | - | chr6.1:8519941-8519960 | None:intergenic | 35.0% |
! | TTGATTCGAATGAGGATTCT+CGG | + | chr6.1:8519213-8519232 | MS.gene62322:CDS | 35.0% |
!! | GGTAACATTTTTGTTGTCAC+AGG | + | chr6.1:8521593-8521612 | MS.gene62322:intron | 35.0% |
!!! | GCTTTGAAATCAGTTTTGTG+AGG | - | chr6.1:8521360-8521379 | None:intergenic | 35.0% |
!!! | GTTTTTTTTGGTTTGACACG+AGG | + | chr6.1:8520137-8520156 | MS.gene62322:intron | 35.0% |
AAATGCTAACAAGTGCCCTT+AGG | + | chr6.1:8520794-8520813 | MS.gene62322:intron | 40.0% | |
AACCTGAAAAGGCTGTTGAA+TGG | - | chr6.1:8519351-8519370 | None:intergenic | 40.0% | |
AAGATATGCAAGGGAAGAAG+AGG | + | chr6.1:8519054-8519073 | MS.gene62322:CDS | 40.0% | |
AATGCTAACAAGTGCCCTTA+GGG | + | chr6.1:8520795-8520814 | MS.gene62322:intron | 40.0% | |
AGATATGCAAGGGAAGAAGA+GGG | + | chr6.1:8519055-8519074 | MS.gene62322:CDS | 40.0% | |
AGGAACTTGATCCTAGTAGT+AGG | - | chr6.1:8519494-8519513 | None:intergenic | 40.0% | |
AGGTGTGGAAAGATATGCAA+GGG | + | chr6.1:8519045-8519064 | MS.gene62322:CDS | 40.0% | |
CACAAACACTAGGTCGAAAA+AGG | + | chr6.1:8519963-8519982 | MS.gene62322:CDS | 40.0% | |
CATATGCCAATGAAATGTGC+AGG | + | chr6.1:8520167-8520186 | MS.gene62322:intron | 40.0% | |
CGTGAAAAACAACAGACACT+TGG | + | chr6.1:8519101-8519120 | MS.gene62322:CDS | 40.0% | |
CTGCACATTTCATTGGCATA+TGG | - | chr6.1:8520169-8520188 | None:intergenic | 40.0% | |
GCATTCTTCACCTTACAAAC+CGG | - | chr6.1:8521294-8521313 | None:intergenic | 40.0% | |
GGATTTCAAGCAATGAGAGT+TGG | + | chr6.1:8520625-8520644 | MS.gene62322:intron | 40.0% | |
GGTAATTTAGGGAAACCACT+TGG | + | chr6.1:8518843-8518862 | MS.gene62322:CDS | 40.0% | |
GTCCATAGACGACATGTTAT+TGG | - | chr6.1:8521102-8521121 | None:intergenic | 40.0% | |
TAATGTACCTGTTGAAGGTG+TGG | - | chr6.1:8519936-8519955 | None:intergenic | 40.0% | |
TAGTAGAGAAAACTGTCGAG+AGG | + | chr6.1:8520002-8520021 | MS.gene62322:CDS | 40.0% | |
TCAAGCAATGAGAGTTGGAA+TGG | + | chr6.1:8520630-8520649 | MS.gene62322:intron | 40.0% | |
TGCATCCAAAACTTGATTCC+CGG | - | chr6.1:8519375-8519394 | None:intergenic | 40.0% | |
TTTCGCAACATGGTCTTCAT+TGG | + | chr6.1:8519243-8519262 | MS.gene62322:CDS | 40.0% | |
TTTGCTAACAAGTGCCCTTA+GGG | - | chr6.1:8520958-8520977 | None:intergenic | 40.0% | |
! | AATGTACCTGTTGAAGGTGT+GGG | - | chr6.1:8519935-8519954 | None:intergenic | 40.0% |
! | AGAAAACTGTTGATGAGGTG+TGG | + | chr6.1:8519030-8519049 | MS.gene62322:CDS | 40.0% |
! | ATGAGTTGCTTAAGAGTGTG+TGG | + | chr6.1:8518880-8518899 | MS.gene62322:CDS | 40.0% |
! | CAACTTGGTTTGAGTTCACA+AGG | + | chr6.1:8518978-8518997 | MS.gene62322:CDS | 40.0% |
! | CAAGGGAGTTTAACTTTGTC+TGG | + | chr6.1:8518996-8519015 | MS.gene62322:CDS | 40.0% |
! | GACATAATCCCAAAAGTGCA+GGG | - | chr6.1:8520678-8520697 | None:intergenic | 40.0% |
! | GATGACTTTGGAGGATTTCT+TGG | + | chr6.1:8519127-8519146 | MS.gene62322:CDS | 40.0% |
! | TGACATAATCCCAAAAGTGC+AGG | - | chr6.1:8520679-8520698 | None:intergenic | 40.0% |
! | TTTTGCTAACAAGTGCCCTT+AGG | - | chr6.1:8520959-8520978 | None:intergenic | 40.0% |
!! | AAGGGCACTTGTTAGCAAAA+GGG | + | chr6.1:8520959-8520978 | MS.gene62322:intron | 40.0% |
!! | ACCTTACAAACCGGTTTTGT+AGG | - | chr6.1:8521285-8521304 | None:intergenic | 40.0% |
!! | AGGATGATGGTGGTTTGTTA+AGG | + | chr6.1:8519189-8519208 | MS.gene62322:CDS | 40.0% |
!! | AGGATGCTGAATTAGTTCTG+CGG | - | chr6.1:8521671-8521690 | None:intergenic | 40.0% |
!! | CAGTTTTGTGAGGTTGTCTT+CGG | - | chr6.1:8521350-8521369 | None:intergenic | 40.0% |
!! | CCTTACAAACCGGTTTTGTA+GGG | - | chr6.1:8521284-8521303 | None:intergenic | 40.0% |
!! | GGATGATGGTGGTTTGTTAA+GGG | + | chr6.1:8519190-8519209 | MS.gene62322:CDS | 40.0% |
!! | GTTAAGGGTTGATTCGAATG+AGG | + | chr6.1:8519205-8519224 | MS.gene62322:CDS | 40.0% |
!! | TAAGGGCACTTGTTAGCAAA+AGG | + | chr6.1:8520958-8520977 | MS.gene62322:intron | 40.0% |
!!! | GCTGCTTTTATTAGCTATCC+TGG | + | chr6.1:8519672-8519691 | MS.gene62322:intron | 40.0% |
AAAACTCCCACACCTTCAAC+AGG | + | chr6.1:8519926-8519945 | MS.gene62322:intron | 45.0% | |
ACCAACCATATGGTATGTGG+TGG | + | chr6.1:8521120-8521139 | MS.gene62322:intron | 45.0% | |
ATGCTAACAAGTGCCCTTAG+GGG | + | chr6.1:8520796-8520815 | MS.gene62322:intron | 45.0% | |
CATACTTCAACAAGCTCTCC+AGG | - | chr6.1:8519693-8519712 | None:intergenic | 45.0% | |
CGGCATAATGTTTCGCAACA+TGG | + | chr6.1:8519233-8519252 | MS.gene62322:CDS | 45.0% | |
GAGGATTTCTTGGTGAAAGC+TGG | + | chr6.1:8519137-8519156 | MS.gene62322:CDS | 45.0% | |
GAGGTGTGGAAAGATATGCA+AGG | + | chr6.1:8519044-8519063 | MS.gene62322:CDS | 45.0% | |
GATATGCAAGGGAAGAAGAG+GGG | + | chr6.1:8519056-8519075 | MS.gene62322:CDS | 45.0% | |
GCACTTTGTTCTGTGAGCTT+TGG | + | chr6.1:8520324-8520343 | MS.gene62322:intron | 45.0% | |
GCAGGCTTATACACAAGAAC+TGG | + | chr6.1:8520185-8520204 | MS.gene62322:intron | 45.0% | |
GTTGTCACAGGAGATAGAGA+AGG | + | chr6.1:8521605-8521624 | MS.gene62322:intron | 45.0% | |
GTTGTTGCTGCTGAACAGAA+TGG | - | chr6.1:8519283-8519302 | None:intergenic | 45.0% | |
TAGAGAAAACTGTCGAGAGG+AGG | + | chr6.1:8520005-8520024 | MS.gene62322:CDS | 45.0% | |
TCAGTCCACCACATACCATA+TGG | - | chr6.1:8521128-8521147 | None:intergenic | 45.0% | |
TCCACCACATACCATATGGT+TGG | - | chr6.1:8521124-8521143 | None:intergenic | 45.0% | |
TCGTCTATGGACCAACCATA+TGG | + | chr6.1:8521110-8521129 | MS.gene62322:intron | 45.0% | |
TGGACCAACCATATGGTATG+TGG | + | chr6.1:8521117-8521136 | MS.gene62322:intron | 45.0% | |
TTGGTGAAAGCTGGAGTTGT+TGG | + | chr6.1:8519146-8519165 | MS.gene62322:CDS | 45.0% | |
! | ACTCTTTTCTCTGTGAGGTG+TGG | + | chr6.1:8520090-8520109 | MS.gene62322:intron | 45.0% |
! | ACTTGGTGAGATGACTTTGG+AGG | + | chr6.1:8519118-8519137 | MS.gene62322:CDS | 45.0% |
! | ATCAGAATGCCCTGCACTTT+TGG | + | chr6.1:8520666-8520685 | MS.gene62322:intron | 45.0% |
! | GACACTTGGTGAGATGACTT+TGG | + | chr6.1:8519115-8519134 | MS.gene62322:CDS | 45.0% |
! | TCAGAATGCCCTGCACTTTT+GGG | + | chr6.1:8520667-8520686 | MS.gene62322:intron | 45.0% |
! | TGCCATTCAACAGCCTTTTC+AGG | + | chr6.1:8519346-8519365 | MS.gene62322:CDS | 45.0% |
!! | CACTTGAAGGGCACTTGTTA+AGG | - | chr6.1:8520935-8520954 | None:intergenic | 45.0% |
!! | CCCTACAAAACCGGTTTGTA+AGG | + | chr6.1:8521281-8521300 | MS.gene62322:intron | 45.0% |
!! | GAAGAAGAGGGGTGTTGATA+GGG | + | chr6.1:8519067-8519086 | MS.gene62322:CDS | 45.0% |
!! | GTTCTGCGGAGCTGATTTTT+AGG | - | chr6.1:8521657-8521676 | None:intergenic | 45.0% |
AAGTGCCCTTAGGGGTTAAG+AGG | + | chr6.1:8520804-8520823 | MS.gene62322:intron | 50.0% | |
CTGTAAGACCTCGGAACAAG+CGG | + | chr6.1:8521051-8521070 | MS.gene62322:intron | 50.0% | |
GTCACAGGAGATAGAGAAGG+AGG | + | chr6.1:8521608-8521627 | MS.gene62322:intron | 50.0% | |
TCGTTCACGAGCAAGAAGAC+AGG | + | chr6.1:8520063-8520082 | MS.gene62322:CDS | 50.0% | |
TGATTCCCGGCAACCTGAAA+AGG | - | chr6.1:8519362-8519381 | None:intergenic | 50.0% | |
TGCTGCTGAACAGAATGGAC+CGG | - | chr6.1:8519278-8519297 | None:intergenic | 50.0% | |
TGTTGAAGCTGGCGAGGTTT+CGG | + | chr6.1:8518905-8518924 | MS.gene62322:CDS | 50.0% | |
! | GCATATGATGCCGGGTTTTG+CGG | + | chr6.1:8519316-8519335 | MS.gene62322:CDS | 50.0% |
! | GGTTGCCGGGAATCAAGTTT+TGG | + | chr6.1:8519367-8519386 | MS.gene62322:CDS | 50.0% |
!! | AGAGGGGTGTTGATAGGGAT+AGG | + | chr6.1:8519072-8519091 | MS.gene62322:CDS | 50.0% |
!! | AGCTGATTTTTAGGCTCGGG+TGG | - | chr6.1:8521648-8521667 | None:intergenic | 50.0% |
!! | AGTGTGTGGAGTGTTGAAGC+TGG | + | chr6.1:8518894-8518913 | MS.gene62322:CDS | 50.0% |
!! | CGGAGCTGATTTTTAGGCTC+GGG | - | chr6.1:8521651-8521670 | None:intergenic | 50.0% |
!! | GCGGAGCTGATTTTTAGGCT+CGG | - | chr6.1:8521652-8521671 | None:intergenic | 50.0% |
!! | GGAAGAAGAGGGGTGTTGAT+AGG | + | chr6.1:8519066-8519085 | MS.gene62322:CDS | 50.0% |
!! | TGATTTTTAGGCTCGGGTGG+TGG | - | chr6.1:8521645-8521664 | None:intergenic | 50.0% |
!!! | AACAGCCTTTTCAGGTTGCC+GGG | + | chr6.1:8519354-8519373 | MS.gene62322:CDS | 50.0% |
!!! | CAACAGCCTTTTCAGGTTGC+CGG | + | chr6.1:8519353-8519372 | MS.gene62322:CDS | 50.0% |
AGTGATGTTGCTGCTGCTGC+TGG | + | chr6.1:8518939-8518958 | MS.gene62322:CDS | 55.0% | |
AGTGCCCTTCAAGTGCCCTA+AGG | + | chr6.1:8520940-8520959 | MS.gene62322:intron | 55.0% | |
CTGTCGAGAGGAGGCAAAAG+AGG | + | chr6.1:8520014-8520033 | MS.gene62322:CDS | 55.0% | |
GCATGAACTGCCGCAAAACC+CGG | - | chr6.1:8519329-8519348 | None:intergenic | 55.0% | |
GCTATGTACCGCTTGTTCCG+AGG | - | chr6.1:8521062-8521081 | None:intergenic | 55.0% | |
GCTGGCGAGGTTTCGGATTT+CGG | + | chr6.1:8518912-8518931 | MS.gene62322:CDS | 55.0% | |
GGTCGAAAAAGGGTTGCCTC+TGG | + | chr6.1:8519974-8519993 | MS.gene62322:CDS | 55.0% | |
GTGCCCTTCAAGTGCCCTAA+GGG | + | chr6.1:8520941-8520960 | MS.gene62322:intron | 55.0% | |
! | AGTGCCCTTAGGGCACTTGA+AGG | - | chr6.1:8520948-8520967 | None:intergenic | 55.0% |
! | GTGCCCTTAGGGCACTTGAA+GGG | - | chr6.1:8520947-8520966 | None:intergenic | 55.0% |
GGCGAGGTTTCGGATTTCGG+CGG | + | chr6.1:8518915-8518934 | MS.gene62322:CDS | 60.0% | |
!! | GTGGAGTGTTGAAGCTGGCG+AGG | + | chr6.1:8518899-8518918 | MS.gene62322:CDS | 60.0% |
! | GGCTCGGGTGGTGGCGCAGT+TGG | - | chr6.1:8521636-8521655 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 8518741 | 8521695 | 8518741 | ID=MS.gene62322 |
chr6.1 | mRNA | 8518741 | 8521695 | 8518741 | ID=MS.gene62322.t1;Parent=MS.gene62322 |
chr6.1 | exon | 8518741 | 8519419 | 8518741 | ID=MS.gene62322.t1.exon1;Parent=MS.gene62322.t1 |
chr6.1 | CDS | 8518741 | 8519419 | 8518741 | ID=cds.MS.gene62322.t1;Parent=MS.gene62322.t1 |
chr6.1 | exon | 8519948 | 8520084 | 8519948 | ID=MS.gene62322.t1.exon2;Parent=MS.gene62322.t1 |
chr6.1 | CDS | 8519948 | 8520084 | 8519948 | ID=cds.MS.gene62322.t1;Parent=MS.gene62322.t1 |
chr6.1 | exon | 8520189 | 8520260 | 8520189 | ID=MS.gene62322.t1.exon3;Parent=MS.gene62322.t1 |
chr6.1 | CDS | 8520189 | 8520260 | 8520189 | ID=cds.MS.gene62322.t1;Parent=MS.gene62322.t1 |
chr6.1 | exon | 8521615 | 8521695 | 8521615 | ID=MS.gene62322.t1.exon4;Parent=MS.gene62322.t1 |
chr6.1 | CDS | 8521615 | 8521695 | 8521615 | ID=cds.MS.gene62322.t1;Parent=MS.gene62322.t1 |
Gene Sequence |
Protein sequence |