Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45467.t1 | AES67570.2 | 98.2 | 910 | 16 | 0 | 1 | 910 | 62 | 971 | 0.00E+00 | 1726.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45467.t1 | F4JI44 | 42.7 | 935 | 457 | 23 | 17 | 904 | 9 | 911 | 2.0e-169 | 597.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45467.t1 | G7IHK7 | 98.2 | 910 | 16 | 0 | 1 | 910 | 62 | 971 | 0.0e+00 | 1726.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049435 | MS.gene45467 | 0.824282 | 8.78E-54 | -1.69E-46 |
MS.gene050020 | MS.gene45467 | 0.82553 | 4.46E-54 | -1.69E-46 |
MS.gene050119 | MS.gene45467 | 0.814567 | 1.44E-51 | -1.69E-46 |
MS.gene052020 | MS.gene45467 | 0.858752 | 6.64E-63 | -1.69E-46 |
MS.gene052323 | MS.gene45467 | 0.803333 | 3.67E-49 | -1.69E-46 |
MS.gene052611 | MS.gene45467 | 0.819903 | 9.10E-53 | -1.69E-46 |
MS.gene052612 | MS.gene45467 | 0.81238 | 4.37E-51 | -1.69E-46 |
MS.gene053998 | MS.gene45467 | 0.812003 | 5.28E-51 | -1.69E-46 |
MS.gene054697 | MS.gene45467 | 0.813202 | 2.88E-51 | -1.69E-46 |
MS.gene055356 | MS.gene45467 | 0.812588 | 3.93E-51 | -1.69E-46 |
MS.gene055357 | MS.gene45467 | 0.835951 | 1.24E-56 | -1.69E-46 |
MS.gene055358 | MS.gene45467 | 0.802423 | 5.65E-49 | -1.69E-46 |
MS.gene056173 | MS.gene45467 | 0.835217 | 1.91E-56 | -1.69E-46 |
MS.gene056498 | MS.gene45467 | 0.804945 | 1.69E-49 | -1.69E-46 |
MS.gene056553 | MS.gene45467 | 0.818246 | 2.17E-52 | -1.69E-46 |
MS.gene057060 | MS.gene45467 | 0.802901 | 4.50E-49 | -1.69E-46 |
MS.gene057314 | MS.gene45467 | 0.808005 | 3.83E-50 | -1.69E-46 |
MS.gene057693 | MS.gene45467 | 0.802637 | 5.10E-49 | -1.69E-46 |
MS.gene057869 | MS.gene45467 | 0.827999 | 1.15E-54 | -1.69E-46 |
MS.gene058829 | MS.gene45467 | 0.812423 | 4.27E-51 | -1.69E-46 |
MS.gene058979 | MS.gene45467 | 0.805383 | 1.37E-49 | -1.69E-46 |
MS.gene060312 | MS.gene45467 | 0.807625 | 4.61E-50 | -1.69E-46 |
MS.gene060568 | MS.gene45467 | 0.804522 | 2.07E-49 | -1.69E-46 |
MS.gene060587 | MS.gene45467 | 0.806382 | 8.45E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 182 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTTTGCAGCATTGCTTGA+TGG | 0.202076 | 2.1:+7135854 | None:intergenic |
GCTTGTTCTTTACCGGTTAA+AGG | 0.208971 | 2.1:+7129571 | None:intergenic |
GTCTAAATCTGTTGCATTAG+AGG | 0.217184 | 2.1:-7132097 | MS.gene45467:intron |
TGCAATTTATATCTGTTAAC+AGG | 0.220547 | 2.1:-7134563 | MS.gene45467:CDS |
TCCTCCACATTTAAGAAGTT+TGG | 0.238064 | 2.1:+7130715 | None:intergenic |
GAATTACAGCAGCTATTTCT+AGG | 0.247178 | 2.1:-7132323 | MS.gene45467:CDS |
GGAGCAACTTCTTAGGAATA+AGG | 0.247722 | 2.1:-7133037 | MS.gene45467:intron |
ATATTCATGGATGCAGCTTT+TGG | 0.261565 | 2.1:-7133228 | MS.gene45467:CDS |
CTATTTACATCAAATGGATT+TGG | 0.266168 | 2.1:-7129934 | MS.gene45467:CDS |
TGTGAAGGATGCCACAAATT+TGG | 0.284599 | 2.1:-7131213 | MS.gene45467:CDS |
GTAGAAAATAAAGGCTTATC+TGG | 0.303534 | 2.1:-7129421 | MS.gene45467:CDS |
TGTTTAAGGAGCAACTTCTT+AGG | 0.312159 | 2.1:-7133044 | MS.gene45467:CDS |
GCTGCATTCCGCTGCATATC+AGG | 0.315685 | 2.1:+7129127 | None:intergenic |
TTCATGCTAACTGTTCTTGC+TGG | 0.316791 | 2.1:-7134724 | MS.gene45467:CDS |
GCAGATGCTCAAACAAAGTT+TGG | 0.317363 | 2.1:-7128176 | MS.gene45467:CDS |
AAGATCAGCTTGTTCTTTAC+CGG | 0.320561 | 2.1:+7129564 | None:intergenic |
GTATTACGTTGTTCCAAGTT+TGG | 0.320577 | 2.1:+7129493 | None:intergenic |
CAATCACTATTTACATCAAA+TGG | 0.335640 | 2.1:-7129940 | MS.gene45467:CDS |
CAACATCAATGAGGGTTATC+AGG | 0.342740 | 2.1:-7129725 | MS.gene45467:intron |
TATTTACATCAAATGGATTT+GGG | 0.345795 | 2.1:-7129933 | MS.gene45467:CDS |
GTAATTCTATTCGATGTATA+TGG | 0.348500 | 2.1:+7132339 | None:intergenic |
GAACATGGCCTCGTCTCTAT+TGG | 0.353213 | 2.1:+7135448 | None:intergenic |
TAAGCATGCTACTTGGGGTT+AGG | 0.357762 | 2.1:+7131183 | None:intergenic |
TTGCTAGCAATGGAAACTTT+AGG | 0.358896 | 2.1:+7130865 | None:intergenic |
GACTTGTTGAAGAAAGCTTT+TGG | 0.371189 | 2.1:-7131711 | MS.gene45467:CDS |
CAGACGCAGGATAAGTGGTT+TGG | 0.372628 | 2.1:-7128305 | MS.gene45467:CDS |
TTGGTATCATGAGAATAGTA+TGG | 0.379852 | 2.1:-7128157 | MS.gene45467:CDS |
TTGTGGATGTTTGTGAGCTC+AGG | 0.389391 | 2.1:-7128253 | MS.gene45467:CDS |
GTTGACATGGAAAAGCTTGC+AGG | 0.390495 | 2.1:-7135509 | MS.gene45467:CDS |
GATCAGTTCGTGTGGCTGTT+AGG | 0.391856 | 2.1:-7133206 | MS.gene45467:CDS |
AAGCTTCTTTACAGCTTCTT+CGG | 0.396342 | 2.1:-7133086 | MS.gene45467:CDS |
ATGACAGGTTGACATATTCA+TGG | 0.400530 | 2.1:-7133241 | MS.gene45467:intron |
TCTACCTGACTTTGCCGACT+TGG | 0.404498 | 2.1:+7129439 | None:intergenic |
ATGCAGCTTTACTTCAATCA+TGG | 0.416081 | 2.1:-7129111 | MS.gene45467:CDS |
CAAAGTCAGGTAGAAAATAA+AGG | 0.417480 | 2.1:-7129430 | MS.gene45467:CDS |
TTACAGGAACTATGCGGAAA+GGG | 0.417723 | 2.1:-7132408 | MS.gene45467:intron |
CTTTACCGGTTAAAGGTAAC+GGG | 0.418778 | 2.1:+7129578 | None:intergenic |
TTTAATCTCCAGAGCAAGAA+AGG | 0.420874 | 2.1:-7130972 | MS.gene45467:intron |
GGTCAATATGTTGTGCTTGT+TGG | 0.424655 | 2.1:-7128365 | MS.gene45467:CDS |
GTGTGCAAGGAGAGGAGATT+GGG | 0.431924 | 2.1:-7128343 | MS.gene45467:CDS |
AGACGCAGGATAAGTGGTTT+GGG | 0.434307 | 2.1:-7128304 | MS.gene45467:CDS |
CGATGACCTTGCGGACGAAA+AGG | 0.439374 | 2.1:+7130947 | None:intergenic |
AAGCTTTAAGCATGCTACTT+GGG | 0.439799 | 2.1:+7131177 | None:intergenic |
ATGATCCATGTTCGGTAAGA+AGG | 0.442369 | 2.1:+7135618 | None:intergenic |
TGCTGTCAGATTTGATTCCA+TGG | 0.444581 | 2.1:+7133143 | None:intergenic |
GACTATAATGAATGCAGAAC+AGG | 0.445578 | 2.1:-7129182 | MS.gene45467:CDS |
ATCTAAACTCCTTGCTGTGC+TGG | 0.446454 | 2.1:+7132122 | None:intergenic |
GGACACCCGTTACCTTTAAC+CGG | 0.446995 | 2.1:-7129583 | MS.gene45467:CDS |
GATCTATCTAACTTACTGCC+TGG | 0.449004 | 2.1:-7130910 | MS.gene45467:CDS |
ATCAAGTCTCAGACAGGCAG+AGG | 0.451931 | 2.1:-7128543 | MS.gene45467:CDS |
TCGAAATTCTAAGTTTGAGC+AGG | 0.452875 | 2.1:-7135372 | MS.gene45467:intron |
TTATCTGGTAAAACAGCATC+AGG | 0.456723 | 2.1:-7129406 | MS.gene45467:CDS |
GAAGCTTTAAGCATGCTACT+TGG | 0.461566 | 2.1:+7131176 | None:intergenic |
TGGTCCAAGTCGGCAAAGTC+AGG | 0.463086 | 2.1:-7129443 | MS.gene45467:CDS |
ACAAGCTGATCTTAATAAGA+AGG | 0.472088 | 2.1:-7129554 | MS.gene45467:CDS |
GGTCATCGAGTGCTTGCAAA+TGG | 0.472556 | 2.1:-7130932 | MS.gene45467:CDS |
CTACAAGAGTTGAATACAAA+AGG | 0.472851 | 2.1:+7134588 | None:intergenic |
GAGCCATGGGACCCAATTGT+TGG | 0.478783 | 2.1:+7128517 | None:intergenic |
TGGAACTTAATAAATTATTG+AGG | 0.479739 | 2.1:-7135664 | MS.gene45467:CDS |
GAACCTACCTTCACAAACAT+TGG | 0.480607 | 2.1:+7131091 | None:intergenic |
TAGGTTGAATTCCAAATTTG+TGG | 0.486191 | 2.1:+7131202 | None:intergenic |
GTAAAGAAGCTTCACACTGC+TGG | 0.487048 | 2.1:+7133097 | None:intergenic |
ATCTATCTAACTTACTGCCT+GGG | 0.489912 | 2.1:-7130909 | MS.gene45467:CDS |
AAAACTGACGCAAGGTGCAT+TGG | 0.492961 | 2.1:+7135479 | None:intergenic |
GGAACTTAATAAATTATTGA+GGG | 0.498528 | 2.1:-7135663 | MS.gene45467:CDS |
GAGGTTTGATGAGCACCAAC+AGG | 0.498672 | 2.1:+7131316 | None:intergenic |
AACCTACCTTCACAAACATT+GGG | 0.498815 | 2.1:+7131092 | None:intergenic |
CAAATGTGAGGAGTCGTCTT+GGG | 0.501574 | 2.1:-7129764 | MS.gene45467:CDS |
TCAGATGCCAGTTCTGCAAA+AGG | 0.502921 | 2.1:-7129334 | MS.gene45467:CDS |
TTGTCGACATCAGCTGCTAC+TGG | 0.503377 | 2.1:+7128565 | None:intergenic |
TAAGTGGTTTGGGAAGAACT+TGG | 0.505851 | 2.1:-7128294 | MS.gene45467:CDS |
GTACAGCAGCTAAGGATGTT+CGG | 0.508640 | 2.1:-7128588 | MS.gene45467:CDS |
GGGCCAACAATTGGGTCCCA+TGG | 0.511953 | 2.1:-7128520 | MS.gene45467:CDS |
ACAATTGCAAGCTGTTACCT+CGG | 0.512874 | 2.1:-7135687 | MS.gene45467:CDS |
GCAAATGTGAGGAGTCGTCT+TGG | 0.513506 | 2.1:-7129765 | MS.gene45467:CDS |
TGTTTCAGACGCAGGATAAG+TGG | 0.516162 | 2.1:-7128310 | MS.gene45467:CDS |
CAGAAGTCACCCAATGGGAT+TGG | 0.516365 | 2.1:-7131661 | MS.gene45467:CDS |
TCTTTACCGGTTAAAGGTAA+CGG | 0.520153 | 2.1:+7129577 | None:intergenic |
ATAAACCTTCTTACCGAACA+TGG | 0.522239 | 2.1:-7135623 | MS.gene45467:CDS |
AGATCGAAAATTTGAATCAT+CGG | 0.523350 | 2.1:+7131602 | None:intergenic |
TGTGGATGTTTGTGAGCTCA+GGG | 0.526357 | 2.1:-7128252 | MS.gene45467:CDS |
CATGGCTCACGTGTCAGTGC+AGG | 0.529073 | 2.1:-7128502 | MS.gene45467:intron |
GGTGTGCAAGGAGAGGAGAT+TGG | 0.534010 | 2.1:-7128344 | MS.gene45467:CDS |
CTTCAGCAATGATCCATGTT+CGG | 0.534248 | 2.1:+7135610 | None:intergenic |
CTGTCAGCAGTGAGATGCCC+GGG | 0.534488 | 2.1:+7131681 | None:intergenic |
GTGAGCTCAGGGTTGACAAA+GGG | 0.534791 | 2.1:-7128241 | MS.gene45467:CDS |
GCTAGCTCGTACAGCAGCTA+AGG | 0.535622 | 2.1:-7128596 | MS.gene45467:CDS |
GTGGTTTGGGAAGAACTTGG+AGG | 0.539187 | 2.1:-7128291 | MS.gene45467:CDS |
AACGAGCGTCTTAAAAGAGT+TGG | 0.541199 | 2.1:-7129265 | MS.gene45467:CDS |
ACCATCAAGCAATGCTGCAA+AGG | 0.541213 | 2.1:-7135855 | MS.gene45467:intron |
TCTGTCAGCAGTGAGATGCC+CGG | 0.541481 | 2.1:+7131680 | None:intergenic |
GAATTCTGCAAATCCAAACT+TGG | 0.544557 | 2.1:-7129506 | MS.gene45467:CDS |
TGGTATCATGAGAATAGTAT+GGG | 0.545629 | 2.1:-7128156 | MS.gene45467:CDS |
TGAACAAAGTATTAGTGTTG+CGG | 0.546428 | 2.1:-7128130 | MS.gene45467:CDS |
GTTGTTGTTCATGTGGATAA+CGG | 0.546629 | 2.1:-7129304 | MS.gene45467:CDS |
ACAGCTGAAGACACAATTCA+AGG | 0.547283 | 2.1:-7129469 | MS.gene45467:CDS |
TGCACTGACACGTGAGCCAT+GGG | 0.548146 | 2.1:+7128504 | None:intergenic |
ATATATCTGCTGCAGTTGGA+TGG | 0.548166 | 2.1:-7131259 | MS.gene45467:CDS |
GATTCCAAACTTCTTAAATG+TGG | 0.548185 | 2.1:-7130719 | MS.gene45467:CDS |
CTGCACTGACACGTGAGCCA+TGG | 0.548926 | 2.1:+7128503 | None:intergenic |
TGCAGCTTTACTTCAATCAT+GGG | 0.548989 | 2.1:-7129110 | MS.gene45467:CDS |
TCCAAACTTCTTAAATGTGG+AGG | 0.550555 | 2.1:-7130716 | MS.gene45467:CDS |
GTTGTGCTTGTTGGTGTGCA+AGG | 0.551205 | 2.1:-7128356 | MS.gene45467:CDS |
GGTGCTCATGACTAAAAGCT+TGG | 0.551479 | 2.1:+7134609 | None:intergenic |
GGTTGAACAATCGAAAAGCT+AGG | 0.557080 | 2.1:-7128618 | MS.gene45467:CDS |
ACGGAGGTTCTTGCTAGCAA+TGG | 0.559169 | 2.1:+7130855 | None:intergenic |
TCTAAACTCAACATCAATGA+GGG | 0.560333 | 2.1:-7129733 | MS.gene45467:CDS |
AGCTTTAAGCATGCTACTTG+GGG | 0.561124 | 2.1:+7131178 | None:intergenic |
TGAGCTGTACCAATCCCATT+GGG | 0.561694 | 2.1:+7131652 | None:intergenic |
TTGAATTGTGTCTTCAGCTG+TGG | 0.564285 | 2.1:+7129471 | None:intergenic |
CAAGCTGATCTTAATAAGAA+GGG | 0.568843 | 2.1:-7129553 | MS.gene45467:CDS |
GCCAATGGCTTCTGACGAGT+AGG | 0.568888 | 2.1:+7128208 | None:intergenic |
TGTTCTTGCTGGTTACAGAC+AGG | 0.569943 | 2.1:-7134713 | MS.gene45467:intron |
TTGAATGTGTAACTTCAAGA+TGG | 0.571720 | 2.1:+7132362 | None:intergenic |
TTGAGCTGTACCAATCCCAT+TGG | 0.571816 | 2.1:+7131651 | None:intergenic |
GCTATAATTTCACTCTCCCA+TGG | 0.572536 | 2.1:-7131350 | MS.gene45467:CDS |
GGTGACGCAGATGATTGAAA+TGG | 0.573198 | 2.1:-7134752 | MS.gene45467:CDS |
TTCTAAACTCAACATCAATG+AGG | 0.573442 | 2.1:-7129734 | MS.gene45467:CDS |
AGAGGAGATTGGGAAAGGAA+CGG | 0.574433 | 2.1:-7128333 | MS.gene45467:CDS |
GCTGACAGAAGTCACCCAAT+GGG | 0.574768 | 2.1:-7131666 | MS.gene45467:CDS |
TCGACAATCAAGTCTCAGAC+AGG | 0.576747 | 2.1:-7128549 | MS.gene45467:CDS |
CCCTACTCGTCAGAAGCCAT+TGG | 0.577203 | 2.1:-7128209 | MS.gene45467:CDS |
CAGGGTTTATTTCAACACAA+TGG | 0.579467 | 2.1:-7134544 | MS.gene45467:CDS |
ATCTGCAAATGTTGTGCCAA+TGG | 0.582162 | 2.1:+7128193 | None:intergenic |
AAGCTTCTTACGCACACCAT+AGG | 0.584788 | 2.1:-7131160 | MS.gene45467:CDS |
AAAGAATGTTGTTGTTCATG+TGG | 0.585615 | 2.1:-7129311 | MS.gene45467:CDS |
CGTGGTTGTACAGGTTGACA+TGG | 0.585989 | 2.1:-7135522 | MS.gene45467:intron |
CCAATGGCTTCTGACGAGTA+GGG | 0.586626 | 2.1:+7128209 | None:intergenic |
TGACAAATAATGATGTCCTA+TGG | 0.586755 | 2.1:+7131144 | None:intergenic |
ACCACTCTGCCAGAAAACTC+AGG | 0.587240 | 2.1:-7129791 | MS.gene45467:intron |
TATGATATATCTGCTGCAGT+TGG | 0.588389 | 2.1:-7131263 | MS.gene45467:CDS |
CAAGGAGAGGAGATTGGGAA+AGG | 0.589372 | 2.1:-7128338 | MS.gene45467:CDS |
TATATCTGCTGCAGTTGGAT+GGG | 0.590351 | 2.1:-7131258 | MS.gene45467:CDS |
TACAGGAACTATGCGGAAAG+GGG | 0.591420 | 2.1:-7132407 | MS.gene45467:intron |
TGCTGACAGAAGTCACCCAA+TGG | 0.593221 | 2.1:-7131667 | MS.gene45467:CDS |
ACAGGAACTATGCGGAAAGG+GGG | 0.593620 | 2.1:-7132406 | MS.gene45467:intron |
TGTGAGCTCAGGGTTGACAA+AGG | 0.597457 | 2.1:-7128242 | MS.gene45467:CDS |
TCAGGGTTGACAAAGGGTTG+CGG | 0.599029 | 2.1:-7128235 | MS.gene45467:CDS |
AAGAAGGGTGGTCAAGTCGA+AGG | 0.599091 | 2.1:-7129538 | MS.gene45467:CDS |
TCAAGTCTCAGACAGGCAGA+GGG | 0.605844 | 2.1:-7128542 | MS.gene45467:CDS |
AGCTGCGAAGACGTAACCTC+AGG | 0.606779 | 2.1:+7128987 | None:intergenic |
TTTGTTCCCAATGTTTGTGA+AGG | 0.607067 | 2.1:-7131098 | MS.gene45467:intron |
CTCTGCCAGAAAACTCAGGA+TGG | 0.608284 | 2.1:-7129787 | MS.gene45467:intron |
CTTACAGGAACTATGCGGAA+AGG | 0.609032 | 2.1:-7132409 | MS.gene45467:intron |
GGAATCAGCAACCTGTGTTG+TGG | 0.611809 | 2.1:-7128270 | MS.gene45467:CDS |
AAGTCTCAGACAGGCAGAGG+GGG | 0.616286 | 2.1:-7128540 | MS.gene45467:CDS |
CGAACATGGATCATTGCTGA+AGG | 0.616319 | 2.1:-7135609 | MS.gene45467:intron |
ATGTTCAAATACGTGTTATG+TGG | 0.619472 | 2.1:-7135431 | MS.gene45467:CDS |
GAAGACACAATTCAAGGCAA+TGG | 0.622872 | 2.1:-7129463 | MS.gene45467:CDS |
GCAATTTATATCTGTTAACA+GGG | 0.623045 | 2.1:-7134562 | MS.gene45467:CDS |
GGTGTTGCTTGCTCACCCCA+AGG | 0.624043 | 2.1:-7134507 | MS.gene45467:intron |
TTATAATGAAGATATTTCCA+TGG | 0.627888 | 2.1:-7133160 | MS.gene45467:CDS |
CGTCCTCCTCTGTCTCTGAG+AGG | 0.628499 | 2.1:+7131297 | None:intergenic |
TAATACTTCACTGGATGTGA+AGG | 0.628752 | 2.1:-7131228 | MS.gene45467:CDS |
TTCAAGGCAATGGTCCAAGT+CGG | 0.629987 | 2.1:-7129453 | MS.gene45467:CDS |
ATGAAGTAGCCAGCACAGCA+AGG | 0.630372 | 2.1:-7132131 | MS.gene45467:CDS |
AACTCAGGATGGCAAATGTG+AGG | 0.630909 | 2.1:-7129776 | MS.gene45467:CDS |
ATCAAACCTCTCAGAGACAG+AGG | 0.631888 | 2.1:-7131303 | MS.gene45467:CDS |
GCAAGCACTCGATGACCTTG+CGG | 0.634512 | 2.1:+7130938 | None:intergenic |
AGGAACGGTGTTTCAGACGC+AGG | 0.635887 | 2.1:-7128318 | MS.gene45467:CDS |
AAATTATTGAGGGAATCAGA+AGG | 0.636604 | 2.1:-7135653 | MS.gene45467:CDS |
CTCAAACTTAGAATTTCGAG+AGG | 0.643809 | 2.1:+7135376 | None:intergenic |
ACATAACACGTATTTGAACA+TGG | 0.645190 | 2.1:+7135433 | None:intergenic |
CTCACAAACATCCACAACAC+AGG | 0.646113 | 2.1:+7128259 | None:intergenic |
CAGGAACTATGCGGAAAGGG+GGG | 0.646619 | 2.1:-7132405 | MS.gene45467:CDS |
ACAGGTGACAATGATAGAGA+AGG | 0.648411 | 2.1:-7129164 | MS.gene45467:CDS |
GCTTGTTGGTGTGCAAGGAG+AGG | 0.661650 | 2.1:-7128351 | MS.gene45467:CDS |
GCTGATCTTAATAAGAAGGG+TGG | 0.661742 | 2.1:-7129550 | MS.gene45467:CDS |
CAAAGTATTAGTGTTGCGGA+CGG | 0.672111 | 2.1:-7128126 | MS.gene45467:CDS |
ACGATATCAAAACTGACGCA+AGG | 0.677238 | 2.1:+7135471 | None:intergenic |
TCGAGAGGATAAATCACACA+AGG | 0.682203 | 2.1:+7135391 | None:intergenic |
ACAATGGAGAGATATTGCAC+AGG | 0.686223 | 2.1:-7134528 | MS.gene45467:CDS |
TAGATGAACCTGATATGCAG+CGG | 0.688783 | 2.1:-7129135 | MS.gene45467:CDS |
TCTGGTAAAACAGCATCAGG+AGG | 0.694098 | 2.1:-7129403 | MS.gene45467:CDS |
ATTGCAAGCTGTTACCTCGG+TGG | 0.694425 | 2.1:-7135684 | MS.gene45467:CDS |
TCAGTATCAAAAGAAAACCC+AGG | 0.703438 | 2.1:+7130892 | None:intergenic |
TTTCTCTTACAGGAACTATG+CGG | 0.707151 | 2.1:-7132414 | MS.gene45467:intron |
CAAGTCTCAGACAGGCAGAG+GGG | 0.712019 | 2.1:-7128541 | MS.gene45467:CDS |
GATATCGTCCAATAGAGACG+AGG | 0.713931 | 2.1:-7135456 | MS.gene45467:CDS |
AAACCTCTCAGAGACAGAGG+AGG | 0.723855 | 2.1:-7131300 | MS.gene45467:CDS |
TAATTTATTAAGTTCCACCG+AGG | 0.728116 | 2.1:+7135670 | None:intergenic |
AAAAGATTGAGCTCGCACAG+AGG | 0.741409 | 2.1:-7129219 | MS.gene45467:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 7128121 | 7135899 | 7128121 | ID=MS.gene45467 |
chr2.1 | mRNA | 7128121 | 7135899 | 7128121 | ID=MS.gene45467.t1;Parent=MS.gene45467 |
chr2.1 | exon | 7135856 | 7135899 | 7135856 | ID=MS.gene45467.t1.exon1;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7135856 | 7135899 | 7135856 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7135610 | 7135735 | 7135610 | ID=MS.gene45467.t1.exon2;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7135610 | 7135735 | 7135610 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7135373 | 7135531 | 7135373 | ID=MS.gene45467.t1.exon3;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7135373 | 7135531 | 7135373 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7134714 | 7134797 | 7134714 | ID=MS.gene45467.t1.exon4;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7134714 | 7134797 | 7134714 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7134508 | 7134636 | 7134508 | ID=MS.gene45467.t1.exon5;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7134508 | 7134636 | 7134508 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7133038 | 7133256 | 7133038 | ID=MS.gene45467.t1.exon6;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7133038 | 7133256 | 7133038 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7132299 | 7132424 | 7132299 | ID=MS.gene45467.t1.exon7;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7132299 | 7132424 | 7132299 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7132098 | 7132193 | 7132098 | ID=MS.gene45467.t1.exon8;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7132098 | 7132193 | 7132098 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7131584 | 7131739 | 7131584 | ID=MS.gene45467.t1.exon9;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7131584 | 7131739 | 7131584 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7131099 | 7131387 | 7131099 | ID=MS.gene45467.t1.exon10;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7131099 | 7131387 | 7131099 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7130857 | 7130982 | 7130857 | ID=MS.gene45467.t1.exon11;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7130857 | 7130982 | 7130857 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7130700 | 7130769 | 7130700 | ID=MS.gene45467.t1.exon12;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7130700 | 7130769 | 7130700 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7129918 | 7129981 | 7129918 | ID=MS.gene45467.t1.exon13;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7129918 | 7129981 | 7129918 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7129726 | 7129800 | 7129726 | ID=MS.gene45467.t1.exon14;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7129726 | 7129800 | 7129726 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7129090 | 7129623 | 7129090 | ID=MS.gene45467.t1.exon15;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7129090 | 7129623 | 7129090 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7128978 | 7129012 | 7128978 | ID=MS.gene45467.t1.exon16;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7128978 | 7129012 | 7128978 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7128503 | 7128639 | 7128503 | ID=MS.gene45467.t1.exon17;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7128503 | 7128639 | 7128503 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
chr2.1 | exon | 7128121 | 7128386 | 7128121 | ID=MS.gene45467.t1.exon18;Parent=MS.gene45467.t1 |
chr2.1 | CDS | 7128121 | 7128386 | 7128121 | ID=cds.MS.gene45467.t1;Parent=MS.gene45467.t1 |
Gene Sequence |
Protein sequence |