Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46537.t1 | XP_003622423.1 | 100 | 515 | 0 | 0 | 1 | 515 | 1 | 515 | 9.10E-304 | 1052 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46537.t1 | Q42919 | 99.2 | 515 | 4 | 0 | 1 | 515 | 1 | 515 | 3.0e-303 | 1041.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46537.t1 | G7KS28 | 100.0 | 515 | 0 | 0 | 1 | 515 | 1 | 515 | 6.6e-304 | 1052.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049402 | MS.gene46537 | 0.803437 | 3.49E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene46537 | 0.820898 | 5.38E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene46537 | -0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene46537 | -0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene050338 | MS.gene46537 | 0.800195 | 1.61E-48 | -1.69E-46 |
| MS.gene050521 | MS.gene46537 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene46537 | -0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene050832 | MS.gene46537 | 0.80491 | 1.72E-49 | -1.69E-46 |
| MS.gene050876 | MS.gene46537 | -0.804717 | 1.89E-49 | -1.69E-46 |
| MS.gene051142 | MS.gene46537 | 0.815911 | 7.25E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene46537 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene054057 | MS.gene46537 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene055204 | MS.gene46537 | 0.852864 | 3.49E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene46537 | -0.830031 | 3.69E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene46537 | -0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene46537 | -0.856572 | 2.94E-62 | -1.69E-46 |
| MS.gene055776 | MS.gene46537 | -0.828968 | 6.69E-55 | -1.69E-46 |
| MS.gene055849 | MS.gene46537 | -0.826339 | 2.86E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene46537 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene059079 | MS.gene46537 | -0.827422 | 1.58E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene46537 | -0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene46537 | 0.831498 | 1.61E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46537.t1 | MTR_7g037440 | 100.000 | 515 | 0 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1058 |
| MS.gene46537.t1 | MTR_6g022860 | 81.274 | 518 | 94 | 2 | 1 | 515 | 1 | 518 | 0.0 | 877 |
| MS.gene46537.t1 | MTR_7g022440 | 51.646 | 486 | 211 | 6 | 29 | 499 | 107 | 583 | 2.59e-164 | 479 |
| MS.gene46537.t1 | MTR_7g111760 | 41.309 | 489 | 264 | 8 | 29 | 511 | 8 | 479 | 3.92e-124 | 372 |
| MS.gene46537.t1 | MTR_7g111760 | 41.309 | 489 | 264 | 8 | 29 | 511 | 128 | 599 | 5.98e-123 | 373 |
| MS.gene46537.t1 | MTR_0590s0010 | 45.238 | 378 | 152 | 7 | 142 | 499 | 5 | 347 | 1.33e-100 | 307 |
| MS.gene46537.t1 | MTR_0275s0010 | 52.190 | 274 | 92 | 5 | 104 | 365 | 4 | 250 | 3.42e-86 | 266 |
| MS.gene46537.t1 | MTR_7g037420 | 67.692 | 195 | 54 | 4 | 26 | 213 | 7 | 199 | 2.43e-74 | 239 |
| MS.gene46537.t1 | MTR_7g037420 | 60.417 | 96 | 30 | 1 | 312 | 407 | 201 | 288 | 1.02e-27 | 114 |
| MS.gene46537.t1 | MTR_4g085930 | 36.957 | 138 | 64 | 4 | 367 | 499 | 14 | 133 | 5.34e-19 | 84.0 |
| MS.gene46537.t1 | MTR_1034s0010 | 58.065 | 62 | 24 | 2 | 27 | 87 | 92 | 152 | 9.16e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46537.t1 | AT5G40760 | 83.012 | 518 | 82 | 3 | 1 | 515 | 1 | 515 | 0.0 | 900 |
| MS.gene46537.t1 | AT5G40760 | 83.012 | 518 | 82 | 3 | 1 | 515 | 1 | 515 | 0.0 | 900 |
| MS.gene46537.t1 | AT3G27300 | 80.077 | 517 | 100 | 2 | 1 | 515 | 55 | 570 | 0.0 | 872 |
| MS.gene46537.t1 | AT3G27300 | 80.077 | 517 | 100 | 2 | 1 | 515 | 72 | 587 | 0.0 | 872 |
| MS.gene46537.t1 | AT3G27300 | 80.077 | 517 | 100 | 2 | 1 | 515 | 1 | 516 | 0.0 | 870 |
| MS.gene46537.t1 | AT3G27300 | 80.077 | 517 | 100 | 2 | 1 | 515 | 1 | 516 | 0.0 | 870 |
| MS.gene46537.t1 | AT3G27300 | 80.077 | 517 | 100 | 2 | 1 | 515 | 1 | 516 | 0.0 | 870 |
| MS.gene46537.t1 | AT5G13110 | 52.263 | 486 | 207 | 6 | 29 | 499 | 109 | 584 | 1.72e-166 | 484 |
| MS.gene46537.t1 | AT5G35790 | 51.646 | 486 | 210 | 6 | 29 | 499 | 90 | 565 | 3.28e-165 | 480 |
| MS.gene46537.t1 | AT1G24280 | 51.738 | 489 | 211 | 6 | 26 | 499 | 109 | 587 | 3.37e-165 | 481 |
| MS.gene46537.t1 | AT1G09420 | 39.841 | 502 | 277 | 8 | 13 | 501 | 130 | 619 | 4.98e-116 | 356 |
| MS.gene46537.t1 | AT1G09420 | 38.867 | 512 | 278 | 9 | 13 | 501 | 130 | 629 | 3.80e-112 | 346 |
Find 109 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGTATTGATCACTATTT+AGG | 0.153510 | 7.1:+59631490 | MS.gene46537:CDS |
| TCTCTGCCTTTCTAGAATTT+AGG | 0.182640 | 7.1:-59633348 | None:intergenic |
| CTCTGCCTTTCTAGAATTTA+GGG | 0.212903 | 7.1:-59633347 | None:intergenic |
| ATCGGTTCTTCTTGCCTCTT+TGG | 0.218581 | 7.1:+59631678 | MS.gene46537:CDS |
| ATTGTTGTGCTTGGTGCTTC+TGG | 0.249489 | 7.1:+59629596 | MS.gene46537:CDS |
| TTCAAACACATGGTTATATA+TGG | 0.252064 | 7.1:+59635341 | MS.gene46537:CDS |
| TGTTCGCAGAGACGAATTAA+AGG | 0.261720 | 7.1:+59635105 | MS.gene46537:CDS |
| TTAAATTTGGTCACTCTATA+AGG | 0.266198 | 7.1:-59635374 | None:intergenic |
| TGCAGGAAATGTCTTCTTCT+TGG | 0.274158 | 7.1:-59629627 | None:intergenic |
| GATACATCATCTAACTGTTT+AGG | 0.287751 | 7.1:-59630356 | None:intergenic |
| AGAGATGATGAAGTTGTTCT+TGG | 0.290851 | 7.1:+59632872 | MS.gene46537:CDS |
| TTCCTCTTATTAGCTGATCT+TGG | 0.296184 | 7.1:+59631364 | MS.gene46537:intron |
| ATAGTATTTAGAGAGGATTT+TGG | 0.310785 | 7.1:+59631856 | MS.gene46537:CDS |
| TTCTAGAAAGGCAGAGATTC+GGG | 0.339963 | 7.1:+59633354 | MS.gene46537:CDS |
| ACAACTTCATCATCTCTGAT+AGG | 0.372544 | 7.1:-59632866 | None:intergenic |
| TGTTGACCTGTTTATATAAG+TGG | 0.385220 | 7.1:-59629655 | None:intergenic |
| AATATGTTCTACAGAATTAG+AGG | 0.395958 | 7.1:+59635067 | MS.gene46537:intron |
| GAATCGTAGTTGCAAAAGTC+GGG | 0.402062 | 7.1:-59632946 | None:intergenic |
| TTAGGAGAAGCACCTTTCTC+TGG | 0.403884 | 7.1:-59630338 | None:intergenic |
| CATTCAAAACCATCTGTTGC+AGG | 0.406222 | 7.1:+59632165 | MS.gene46537:CDS |
| AACTTAACACATACCCATAT+TGG | 0.409607 | 7.1:-59631906 | None:intergenic |
| TGCTCAGGCTTGAGAGAAAC+GGG | 0.411666 | 7.1:-59632525 | None:intergenic |
| AGTGAACTAGACTTGTCATA+TGG | 0.414484 | 7.1:+59634286 | MS.gene46537:CDS |
| TTGTTTCTTGTTAGGCATCA+TGG | 0.414804 | 7.1:+59635200 | MS.gene46537:intron |
| TGAAGATGGATTTCGCTTGT+TGG | 0.415598 | 7.1:+59630529 | MS.gene46537:CDS |
| GTTCAATTCAAGGATGTTCC+TGG | 0.418935 | 7.1:+59633376 | MS.gene46537:CDS |
| ATTCTAGAAAGGCAGAGATT+CGG | 0.422585 | 7.1:+59633353 | MS.gene46537:CDS |
| GGTTCTTTGCTTGATTGCTA+TGG | 0.422658 | 7.1:+59632497 | MS.gene46537:intron |
| AGAGATTCGGGTTCAATTCA+AGG | 0.426463 | 7.1:+59633366 | MS.gene46537:CDS |
| GGCCCTTATGATTCTGAAGA+TGG | 0.427377 | 7.1:+59630515 | MS.gene46537:CDS |
| CTCTTATTAGCTGATCTTGG+TGG | 0.430594 | 7.1:+59631367 | MS.gene46537:intron |
| TCTGCAGGACCTCTACTTCC+CGG | 0.432492 | 7.1:-59635286 | None:intergenic |
| GCAGGTCAAGCAACCTGGAC+TGG | 0.444296 | 7.1:+59634246 | MS.gene46537:intron |
| CCTCTACTTCCCGGCTTGTA+AGG | 0.444570 | 7.1:-59635277 | None:intergenic |
| GCAAGAGAGGTACTTGAAAC+TGG | 0.447171 | 7.1:+59629563 | MS.gene46537:CDS |
| TTCTCATCTCGAATGTGCTC+AGG | 0.450398 | 7.1:-59632540 | None:intergenic |
| AATCCATCTTCAGAATCATA+AGG | 0.464977 | 7.1:-59630518 | None:intergenic |
| GTTCCTTTCATTGTGAAAGC+AGG | 0.468803 | 7.1:+59633319 | MS.gene46537:CDS |
| ACACTCTCTATTGTTGTGCT+TGG | 0.470207 | 7.1:+59629587 | MS.gene46537:CDS |
| CTTCCCGGCTTGTAAGGAAC+CGG | 0.470765 | 7.1:-59635271 | None:intergenic |
| GTCGGGGTGTTTGAATCGTC+AGG | 0.483999 | 7.1:-59632929 | None:intergenic |
| TCAAGTACCTCTCTTGCTAC+AGG | 0.484307 | 7.1:-59629557 | None:intergenic |
| TTCCCTGCTTTCACAATGAA+AGG | 0.485117 | 7.1:-59633322 | None:intergenic |
| GTTGTTCTTGGACAATATGA+AGG | 0.485435 | 7.1:+59632884 | MS.gene46537:CDS |
| TGCATGCAGGTCAAGCAACC+TGG | 0.485610 | 7.1:+59634241 | MS.gene46537:intron |
| TCATATGGGCAACGATATCA+AGG | 0.488911 | 7.1:+59634301 | MS.gene46537:CDS |
| AGCTATCTTGTTCCAGAGAA+AGG | 0.490597 | 7.1:+59630326 | MS.gene46537:intron |
| TTTGAATCGTCAGGTACAGT+TGG | 0.490922 | 7.1:-59632920 | None:intergenic |
| GCACATTGTCAATGTGGTTG+TGG | 0.497347 | 7.1:-59631703 | None:intergenic |
| TGCGGATACACAATGAAAGA+TGG | 0.498148 | 7.1:+59632969 | MS.gene46537:CDS |
| GTGCTCAGGCTTGAGAGAAA+CGG | 0.503292 | 7.1:-59632526 | None:intergenic |
| TTGTTGAGAAACCCTTTGGT+AGG | 0.509647 | 7.1:+59631404 | MS.gene46537:CDS |
| GTTGTTGTTGAGAAACCCTT+TGG | 0.510673 | 7.1:+59631400 | MS.gene46537:CDS |
| ACTGCAGACATTTCCAGTCC+AGG | 0.513892 | 7.1:-59634259 | None:intergenic |
| TTGATCATCTTGCAAACGGA+TGG | 0.515322 | 7.1:-59630644 | None:intergenic |
| AAGCCGGTTCCTTACAAGCC+GGG | 0.516977 | 7.1:+59635268 | MS.gene46537:CDS |
| ATTAGACGCTCATAAGCCTC+TGG | 0.517339 | 7.1:-59634334 | None:intergenic |
| GTGAACTAGACTTGTCATAT+GGG | 0.517809 | 7.1:+59634287 | MS.gene46537:CDS |
| GAAGAACTCAGTACTCAGAT+TGG | 0.521932 | 7.1:+59631442 | MS.gene46537:CDS |
| AATAACTCATCTGCTTCTGC+AGG | 0.524471 | 7.1:-59635301 | None:intergenic |
| ATCCATCTTCAGAATCATAA+GGG | 0.527019 | 7.1:-59630517 | None:intergenic |
| TGATAGAGGGGAGTTGAAGC+CGG | 0.534075 | 7.1:+59635252 | MS.gene46537:CDS |
| TTGAATCGTCAGGTACAGTT+GGG | 0.534649 | 7.1:-59632919 | None:intergenic |
| CAACTTCATCATCTCTGATA+GGG | 0.535556 | 7.1:-59632865 | None:intergenic |
| AGCTATTTACATGAAGCTTA+CGG | 0.538172 | 7.1:+59633932 | MS.gene46537:CDS |
| TTATAGGTTAAATATGTAAG+TGG | 0.542299 | 7.1:+59630494 | MS.gene46537:intron |
| TTTCATTGTGAAAGCAGGGA+AGG | 0.547491 | 7.1:+59633324 | MS.gene46537:CDS |
| TATTAGCTGATCTTGGTGGA+TGG | 0.548066 | 7.1:+59631371 | MS.gene46537:intron |
| TGTTGAGAAACCCTTTGGTA+GGG | 0.549697 | 7.1:+59631405 | MS.gene46537:CDS |
| TTCCTTTCATTGTGAAAGCA+GGG | 0.552641 | 7.1:+59633320 | MS.gene46537:CDS |
| TTCATGTAAATAGCTTCTGA+AGG | 0.553309 | 7.1:-59633924 | None:intergenic |
| GATTCTAGATCCCTACCAAA+GGG | 0.554571 | 7.1:-59631415 | None:intergenic |
| AGAAGATGGGAACAAATGAA+TGG | 0.557625 | 7.1:+59629498 | None:intergenic |
| GAAGGCCCTAAATTCTAGAA+AGG | 0.558077 | 7.1:+59633342 | MS.gene46537:CDS |
| AGAATCGTAGTTGCAAAAGT+CGG | 0.562118 | 7.1:-59632947 | None:intergenic |
| ATTTGGTCACTCTATAAGGT+AGG | 0.563656 | 7.1:-59635370 | None:intergenic |
| TTATATAAGTGGAAAAGTGC+AGG | 0.567564 | 7.1:-59629644 | None:intergenic |
| CTTGCAGATAGTATTTAGAG+AGG | 0.573620 | 7.1:+59631849 | MS.gene46537:intron |
| GAAGCCGGTTCCTTACAAGC+CGG | 0.575682 | 7.1:+59635267 | MS.gene46537:CDS |
| CCTTACAAGCCGGGAAGTAG+AGG | 0.577449 | 7.1:+59635277 | MS.gene46537:CDS |
| CAACCACATTGACAATGTGC+AGG | 0.580745 | 7.1:+59631706 | MS.gene46537:CDS |
| GCGGATACACAATGAAAGAT+GGG | 0.581132 | 7.1:+59632970 | MS.gene46537:CDS |
| TTTACACAAAATTGATAGAG+GGG | 0.587444 | 7.1:+59635240 | MS.gene46537:CDS |
| AAGGCCTTACCTGCAACAGA+TGG | 0.596779 | 7.1:-59632174 | None:intergenic |
| TGAATCTCCTGTAGCAAGAG+AGG | 0.597747 | 7.1:+59629550 | MS.gene46537:CDS |
| TATTGATCACTATTTAGGAA+AGG | 0.606498 | 7.1:+59631495 | MS.gene46537:CDS |
| GTAGAAAGAAGAGATAGCAT+AGG | 0.611814 | 7.1:+59629524 | MS.gene46537:CDS |
| TGGTCACTCTATAAGGTAGG+AGG | 0.612519 | 7.1:-59635367 | None:intergenic |
| AATTGAGAAACAAATTGCGT+AGG | 0.617863 | 7.1:+59630060 | MS.gene46537:CDS |
| GCTGGATATGTTCAAACACA+TGG | 0.621030 | 7.1:+59635331 | MS.gene46537:CDS |
| ACGCTCATAAGCCTCTGGAA+TGG | 0.622611 | 7.1:-59634329 | None:intergenic |
| AGATTCTAGATCCCTACCAA+AGG | 0.632140 | 7.1:-59631416 | None:intergenic |
| TAGCTTCTGAAGGTTGTAGA+CGG | 0.636037 | 7.1:-59633914 | None:intergenic |
| TCACCTGCACATTGTCAATG+TGG | 0.641121 | 7.1:-59631709 | None:intergenic |
| AAAATGTGAACTTCATCAGG+TGG | 0.641225 | 7.1:-59630005 | None:intergenic |
| CAAACGGATGGATACACTGA+AGG | 0.643595 | 7.1:-59630632 | None:intergenic |
| ACGGATGGATACACTGAAGG+AGG | 0.651720 | 7.1:-59630629 | None:intergenic |
| ATAGTAAAGAGGGTTCATCT+CGG | 0.652229 | 7.1:+59630585 | MS.gene46537:CDS |
| CATTCGAGATGAGAAAGTGA+AGG | 0.654543 | 7.1:+59632548 | MS.gene46537:CDS |
| ATGTGGTTGTGGTTCCAAAG+AGG | 0.659117 | 7.1:-59631692 | None:intergenic |
| ATACACAATGAAAGATGGGA+AGG | 0.667227 | 7.1:+59632974 | MS.gene46537:CDS |
| TTTGGAACTGATGGTCGTGG+TGG | 0.667951 | 7.1:+59631874 | MS.gene46537:CDS |
| TGATCAATACGATAAATCTG+TGG | 0.674571 | 7.1:-59631481 | None:intergenic |
| TCAAGGGATAACCATTCCAG+AGG | 0.682270 | 7.1:+59634318 | MS.gene46537:CDS |
| CATATGGGCAACGATATCAA+GGG | 0.685875 | 7.1:+59634302 | MS.gene46537:CDS |
| AAAGGAACTAGTGCAAAACA+TGG | 0.686361 | 7.1:+59631513 | MS.gene46537:CDS |
| AATCGTAGTTGCAAAAGTCG+GGG | 0.687500 | 7.1:-59632945 | None:intergenic |
| GTACTCCTGAAAATGTCACC+AGG | 0.694766 | 7.1:-59633394 | None:intergenic |
| GTAAAGAGGGTTCATCTCGG+AGG | 0.714169 | 7.1:+59630588 | MS.gene46537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | + | chr7.1:59631546-59631565 | MS.gene46537:intron | 0.0% |
| !! | AGTAAATTATCAATTTAATT+AGG | - | chr7.1:59634972-59634991 | None:intergenic | 10.0% |
| !! | GTAAATTATCAATTTAATTA+GGG | - | chr7.1:59634971-59634990 | None:intergenic | 10.0% |
| !!! | ATAATTTTTAAGACTAAAAT+TGG | - | chr7.1:59634605-59634624 | None:intergenic | 10.0% |
| !!! | ATATTTATGTACTTTTTTTA+CGG | - | chr7.1:59632275-59632294 | None:intergenic | 10.0% |
| !!! | ATTTTATAATGAAATAGATT+TGG | + | chr7.1:59632198-59632217 | MS.gene46537:intron | 10.0% |
| !!! | TAACTAGTAATTATAATTTT+AGG | + | chr7.1:59631950-59631969 | MS.gene46537:intron | 10.0% |
| !! | AATTTGTGATATCATTAAAA+GGG | + | chr7.1:59634641-59634660 | MS.gene46537:intron | 15.0% |
| !! | ATATTTGAAAAATAGTAAAG+AGG | + | chr7.1:59630574-59630593 | MS.gene46537:CDS | 15.0% |
| !! | ATTTCTGAATAATAATAAAC+AGG | - | chr7.1:59631329-59631348 | None:intergenic | 15.0% |
| !! | TAGAAAAATTGTTAGTTATT+AGG | + | chr7.1:59634176-59634195 | MS.gene46537:intron | 15.0% |
| !! | TATTTGAAAAATAGTAAAGA+GGG | + | chr7.1:59630575-59630594 | MS.gene46537:CDS | 15.0% |
| !! | TCAAGAATAGTAAAATAAAT+TGG | - | chr7.1:59631304-59631323 | None:intergenic | 15.0% |
| !! | TCTATTTCATTATAAAATCA+AGG | - | chr7.1:59632196-59632215 | None:intergenic | 15.0% |
| !! | TTAATATATAATAGTTGTTG+AGG | + | chr7.1:59629862-59629881 | MS.gene46537:intron | 15.0% |
| !!! | AACTTAATGTTAACAATTTT+AGG | + | chr7.1:59633861-59633880 | MS.gene46537:intron | 15.0% |
| !!! | GAGTATTGTTTTTTATAATT+AGG | + | chr7.1:59629884-59629903 | MS.gene46537:intron | 15.0% |
| !!! | GATAAAGTTTTAAAATATTC+AGG | - | chr7.1:59632350-59632369 | None:intergenic | 15.0% |
| !!! | TAATTTGTGATATCATTAAA+AGG | + | chr7.1:59634640-59634659 | MS.gene46537:intron | 15.0% |
| !! | CATATATACAACAATATAAG+AGG | - | chr7.1:59634019-59634038 | None:intergenic | 20.0% |
| !! | TAAATTAGCTATAGTATATC+AGG | - | chr7.1:59631101-59631120 | None:intergenic | 20.0% |
| !! | TAACAAGAAACAAAAGAATA+TGG | - | chr7.1:59635193-59635212 | None:intergenic | 20.0% |
| !! | TATTTCCTTGTTCATATTTA+TGG | + | chr7.1:59634374-59634393 | MS.gene46537:intron | 20.0% |
| !! | TCAAAGCTAAGTAAAAATAA+AGG | - | chr7.1:59632768-59632787 | None:intergenic | 20.0% |
| !! | TTAAGCAGAAAAAGTAAAAT+TGG | - | chr7.1:59632011-59632030 | None:intergenic | 20.0% |
| !! | TTAATTAGGGTTACATAATT+TGG | - | chr7.1:59634958-59634977 | None:intergenic | 20.0% |
| !! | TTATAGGTTAAATATGTAAG+TGG | + | chr7.1:59630494-59630513 | MS.gene46537:intron | 20.0% |
| !!! | ATATTCTTTTGTTTCTTGTT+AGG | + | chr7.1:59635192-59635211 | MS.gene46537:intron | 20.0% |
| !!! | ATATTTACTTGTTTTCACTT+TGG | + | chr7.1:59633530-59633549 | MS.gene46537:intron | 20.0% |
| !!! | TCTTTTTCATTTCAATTTTC+TGG | + | chr7.1:59632575-59632594 | MS.gene46537:intron | 20.0% |
| !!! | TGTATCAAAGTTTTTACAAT+TGG | + | chr7.1:59630373-59630392 | MS.gene46537:CDS | 20.0% |
| !!! | TTTTACACAAAATTGATAGA+GGG | + | chr7.1:59635239-59635258 | MS.gene46537:CDS | 20.0% |
| ! | AAAACCCAAGTTTAAATTTG+TGG | - | chr7.1:59631817-59631836 | None:intergenic | 25.0% |
| ! | AATATGTTCTACAGAATTAG+AGG | + | chr7.1:59635067-59635086 | MS.gene46537:intron | 25.0% |
| ! | AATTAAAAAGTCCAATCGTT+CGG | + | chr7.1:59629769-59629788 | MS.gene46537:intron | 25.0% |
| ! | ACATATTTAACCTATAAGCA+AGG | - | chr7.1:59630491-59630510 | None:intergenic | 25.0% |
| ! | ACCAACGATTAAGTAATAAA+AGG | - | chr7.1:59631048-59631067 | None:intergenic | 25.0% |
| ! | AGAAATAGAACATCGATAAA+TGG | - | chr7.1:59630419-59630438 | None:intergenic | 25.0% |
| ! | AGTTCTTCAAATTGTAGAAA+CGG | - | chr7.1:59633721-59633740 | None:intergenic | 25.0% |
| ! | ATATGAACTTGAGTTTATGA+TGG | - | chr7.1:59634521-59634540 | None:intergenic | 25.0% |
| ! | ATATGCCACAAATTTAAACT+TGG | + | chr7.1:59631809-59631828 | MS.gene46537:intron | 25.0% |
| ! | ATATTTAACCTATAAGCAAG+GGG | - | chr7.1:59630489-59630508 | None:intergenic | 25.0% |
| ! | ATTGAGTGTATTTATAGTGT+CGG | - | chr7.1:59630876-59630895 | None:intergenic | 25.0% |
| ! | ATTGTTAAGAATCTTCAAGA+AGG | - | chr7.1:59633022-59633041 | None:intergenic | 25.0% |
| ! | CATATTTAACCTATAAGCAA+GGG | - | chr7.1:59630490-59630509 | None:intergenic | 25.0% |
| ! | GAAATATAGAAGAAACTGAA+TGG | + | chr7.1:59633128-59633147 | MS.gene46537:intron | 25.0% |
| ! | GCGTTATAATTTAAAGATGA+AGG | - | chr7.1:59632803-59632822 | None:intergenic | 25.0% |
| ! | GCTTAATGTTAGTTCATTAA+GGG | - | chr7.1:59629962-59629981 | None:intergenic | 25.0% |
| ! | TAGTGCTAAAAAGACTTATA+TGG | + | chr7.1:59634494-59634513 | MS.gene46537:intron | 25.0% |
| ! | TATGCCACAAATTTAAACTT+GGG | + | chr7.1:59631810-59631829 | MS.gene46537:intron | 25.0% |
| ! | TATTGATCACTATTTAGGAA+AGG | + | chr7.1:59631495-59631514 | MS.gene46537:CDS | 25.0% |
| ! | TATTTCATCAAGTTTCTCAA+CGG | + | chr7.1:59631220-59631239 | MS.gene46537:intron | 25.0% |
| ! | TGAAATGTAACAATGAGAAT+TGG | + | chr7.1:59635044-59635063 | MS.gene46537:intron | 25.0% |
| ! | TGTGATATCACAAAAATCTT+TGG | - | chr7.1:59633635-59633654 | None:intergenic | 25.0% |
| ! | TTCAAACACATGGTTATATA+TGG | + | chr7.1:59635341-59635360 | MS.gene46537:CDS | 25.0% |
| ! | TTGAAATTTAAGTGACTGTA+AGG | - | chr7.1:59634791-59634810 | None:intergenic | 25.0% |
| ! | TTTACACAAAATTGATAGAG+GGG | + | chr7.1:59635240-59635259 | MS.gene46537:CDS | 25.0% |
| !! | ACAAATTTAAACTTGGGTTT+TGG | + | chr7.1:59631816-59631835 | MS.gene46537:intron | 25.0% |
| !! | ACTTTTCCACTTATATAAAC+AGG | + | chr7.1:59629649-59629668 | MS.gene46537:CDS | 25.0% |
| !! | ATAGTATTTAGAGAGGATTT+TGG | + | chr7.1:59631856-59631875 | MS.gene46537:CDS | 25.0% |
| !! | ATGAAATTACTTTGCTGTAT+AGG | + | chr7.1:59634073-59634092 | MS.gene46537:intron | 25.0% |
| !! | CTATCAATTTTGTGTAAAAG+CGG | - | chr7.1:59635238-59635257 | None:intergenic | 25.0% |
| !! | CTTTTACACAAAATTGATAG+AGG | + | chr7.1:59635238-59635257 | MS.gene46537:CDS | 25.0% |
| !! | TATCGTATTGATCACTATTT+AGG | + | chr7.1:59631490-59631509 | MS.gene46537:CDS | 25.0% |
| !! | TCCTTTTATTACTTAATCGT+TGG | + | chr7.1:59631044-59631063 | MS.gene46537:intron | 25.0% |
| !! | TGTATTTGATCTTTGTTTAG+TGG | - | chr7.1:59632390-59632409 | None:intergenic | 25.0% |
| !!! | AATTCTATCTTTTGTTTCCT+TGG | + | chr7.1:59631757-59631776 | MS.gene46537:intron | 25.0% |
| !!! | ACAATTTTAGGTAAAAAGCA+AGG | + | chr7.1:59633873-59633892 | MS.gene46537:intron | 25.0% |
| !!! | CAATTTTAGGTAAAAAGCAA+GGG | + | chr7.1:59633874-59633893 | MS.gene46537:intron | 25.0% |
| !!! | GTTTGTGATTCTAAAACTTA+TGG | + | chr7.1:59630293-59630312 | MS.gene46537:intron | 25.0% |
| !!! | TAATATTTTGAAGACAACAG+AGG | - | chr7.1:59633842-59633861 | None:intergenic | 25.0% |
| !!! | TTTTAAAATATTCAGGAGAC+TGG | - | chr7.1:59632343-59632362 | None:intergenic | 25.0% |
| AACTTAACACATACCCATAT+TGG | - | chr7.1:59631909-59631928 | None:intergenic | 30.0% | |
| AATCCATCTTCAGAATCATA+AGG | - | chr7.1:59630521-59630540 | None:intergenic | 30.0% | |
| AATTGAGAAACAAATTGCGT+AGG | + | chr7.1:59630060-59630079 | MS.gene46537:CDS | 30.0% | |
| ACCAACCATAAATATGAACA+AGG | - | chr7.1:59634382-59634401 | None:intergenic | 30.0% | |
| ACCTGATGCAAAAAAGTAAT+TGG | - | chr7.1:59633299-59633318 | None:intergenic | 30.0% | |
| ACTAACACAGATATAGACAA+CGG | - | chr7.1:59630942-59630961 | None:intergenic | 30.0% | |
| AGCTATTTACATGAAGCTTA+CGG | + | chr7.1:59633932-59633951 | MS.gene46537:CDS | 30.0% | |
| ATCCATCTTCAGAATCATAA+GGG | - | chr7.1:59630520-59630539 | None:intergenic | 30.0% | |
| ATGTCTTGTAAATTCTGACT+GGG | + | chr7.1:59630442-59630461 | MS.gene46537:intron | 30.0% | |
| ATTAAAAAGTCCAATCGTTC+GGG | + | chr7.1:59629770-59629789 | MS.gene46537:intron | 30.0% | |
| CAATTATTCCATAGACTCAT+TGG | - | chr7.1:59634573-59634592 | None:intergenic | 30.0% | |
| CAGTATTTCTTGTCACAAAA+AGG | - | chr7.1:59631272-59631291 | None:intergenic | 30.0% | |
| CGCTTAATGTTAGTTCATTA+AGG | - | chr7.1:59629963-59629982 | None:intergenic | 30.0% | |
| CTTGTTACTCAATCTAGAAA+GGG | + | chr7.1:59634842-59634861 | MS.gene46537:intron | 30.0% | |
| GAGAAAACCAATATTGCATA+AGG | - | chr7.1:59633435-59633454 | None:intergenic | 30.0% | |
| GAGTATAAGTCGTATTAAGA+AGG | - | chr7.1:59631635-59631654 | None:intergenic | 30.0% | |
| GATACATCATCTAACTGTTT+AGG | - | chr7.1:59630359-59630378 | None:intergenic | 30.0% | |
| GATGAGTTATTAGAAAAAGC+TGG | + | chr7.1:59635313-59635332 | MS.gene46537:CDS | 30.0% | |
| GATGCGTAGTCAAATATAAA+AGG | - | chr7.1:59632685-59632704 | None:intergenic | 30.0% | |
| GCAGAAAATGATGAGAAAAA+AGG | - | chr7.1:59633255-59633274 | None:intergenic | 30.0% | |
| GCATAACATGAAAAGTTTCA+AGG | - | chr7.1:59632746-59632765 | None:intergenic | 30.0% | |
| GCATTATGATCTCAACAAAA+TGG | - | chr7.1:59632308-59632327 | None:intergenic | 30.0% | |
| GGAAAAAAAATCTTGCAGAA+AGG | - | chr7.1:59631080-59631099 | None:intergenic | 30.0% | |
| GTCTTAAAAATTATAAGCGC+TGG | + | chr7.1:59634611-59634630 | MS.gene46537:intron | 30.0% | |
| TATCTGTGTTAGTCATATGT+AGG | + | chr7.1:59630949-59630968 | MS.gene46537:intron | 30.0% | |
| TATTTAACCTATAAGCAAGG+GGG | - | chr7.1:59630488-59630507 | None:intergenic | 30.0% | |
| TCCTTGTTCATATTTATGGT+TGG | + | chr7.1:59634378-59634397 | MS.gene46537:intron | 30.0% | |
| TCTTGTTACTCAATCTAGAA+AGG | + | chr7.1:59634841-59634860 | MS.gene46537:intron | 30.0% | |
| TGATCAATACGATAAATCTG+TGG | - | chr7.1:59631484-59631503 | None:intergenic | 30.0% | |
| TGCTATACCTTATGCAATAT+TGG | + | chr7.1:59633425-59633444 | MS.gene46537:intron | 30.0% | |
| TGTTGACCTGTTTATATAAG+TGG | - | chr7.1:59629658-59629677 | None:intergenic | 30.0% | |
| TTATTCGCTAATACACTGTT+TGG | + | chr7.1:59634122-59634141 | MS.gene46537:intron | 30.0% | |
| TTCATGTAAATAGCTTCTGA+AGG | - | chr7.1:59633927-59633946 | None:intergenic | 30.0% | |
| TTGATATGTATAGCAACTTG+TGG | - | chr7.1:59634459-59634478 | None:intergenic | 30.0% | |
| TTGTTAACGAATTTGTCCAA+TGG | + | chr7.1:59633585-59633604 | MS.gene46537:intron | 30.0% | |
| ! | ACTGCTTTGATAGTAGAATT+TGG | + | chr7.1:59631120-59631139 | MS.gene46537:intron | 30.0% |
| ! | ATCAATCTTGGAAGTGTAAA+TGG | + | chr7.1:59633501-59633520 | MS.gene46537:intron | 30.0% |
| ! | CATATTAGTCTGATAAGTGT+CGG | - | chr7.1:59632446-59632465 | None:intergenic | 30.0% |
| ! | GGTAAATAAGTTTTGCAATC+AGG | - | chr7.1:59633700-59633719 | None:intergenic | 30.0% |
| ! | TAGTACTTCGTTTTGCAAAT+CGG | + | chr7.1:59631660-59631679 | MS.gene46537:CDS | 30.0% |
| ! | TATAAACCATCTGCATTGAT+AGG | - | chr7.1:59632417-59632436 | None:intergenic | 30.0% |
| ! | TCATATTTATGGTTGGTCAA+TGG | + | chr7.1:59634385-59634404 | MS.gene46537:intron | 30.0% |
| ! | TTATATAAGTGGAAAAGTGC+AGG | - | chr7.1:59629647-59629666 | None:intergenic | 30.0% |
| ! | TTTTCTTCAAGAATTCCACT+CGG | + | chr7.1:59631608-59631627 | MS.gene46537:intron | 30.0% |
| ! | TTTTGTGATATCACAACCTT+GGG | + | chr7.1:59633640-59633659 | MS.gene46537:intron | 30.0% |
| ! | TTTTTGTGATATCACAACCT+TGG | + | chr7.1:59633639-59633658 | MS.gene46537:intron | 30.0% |
| !! | AGTTTTGATCATCTTGCAAA+CGG | - | chr7.1:59630651-59630670 | None:intergenic | 30.0% |
| !! | GCATATCAACTTTGATAATG+TGG | - | chr7.1:59631795-59631814 | None:intergenic | 30.0% |
| !!! | ACCAATTACTTTTTTGCATC+AGG | + | chr7.1:59633295-59633314 | MS.gene46537:intron | 30.0% |
| !!! | GATGGTTTTGAATGATATCT+CGG | - | chr7.1:59632159-59632178 | None:intergenic | 30.0% |
| !!! | GTGGATATTTTGACCAATAT+GGG | + | chr7.1:59631893-59631912 | MS.gene46537:CDS | 30.0% |
| !!! | TTGGTCAATGGTTTTAATTC+AGG | + | chr7.1:59634397-59634416 | MS.gene46537:intron | 30.0% |
| !!! | TTTTTACTTAGCTTTGAGAC+AGG | + | chr7.1:59632771-59632790 | MS.gene46537:intron | 30.0% |
| AAAATGTGAACTTCATCAGG+TGG | - | chr7.1:59630008-59630027 | None:intergenic | 35.0% | |
| AAAGGAACTAGTGCAAAACA+TGG | + | chr7.1:59631513-59631532 | MS.gene46537:CDS | 35.0% | |
| AATCTTCAAGAAGGAAATGC+AGG | - | chr7.1:59633013-59633032 | None:intergenic | 35.0% | |
| ACAACTTCATCATCTCTGAT+AGG | - | chr7.1:59632869-59632888 | None:intergenic | 35.0% | |
| AGAATCGTAGTTGCAAAAGT+CGG | - | chr7.1:59632950-59632969 | None:intergenic | 35.0% | |
| AGAGATGATGAAGTTGTTCT+TGG | + | chr7.1:59632872-59632891 | MS.gene46537:CDS | 35.0% | |
| AGTGAACTAGACTTGTCATA+TGG | + | chr7.1:59634286-59634305 | MS.gene46537:CDS | 35.0% | |
| ATACACAATGAAAGATGGGA+AGG | + | chr7.1:59632974-59632993 | MS.gene46537:CDS | 35.0% | |
| ATAGTAAAGAGGGTTCATCT+CGG | + | chr7.1:59630585-59630604 | MS.gene46537:CDS | 35.0% | |
| ATATCATTAAAAGGGCAACC+CGG | + | chr7.1:59634649-59634668 | MS.gene46537:intron | 35.0% | |
| ATCTTCAAGAAGGAAATGCA+GGG | - | chr7.1:59633012-59633031 | None:intergenic | 35.0% | |
| CAACAATATAAGAGGCAATC+CGG | - | chr7.1:59634011-59634030 | None:intergenic | 35.0% | |
| CAACTTCATCATCTCTGATA+GGG | - | chr7.1:59632868-59632887 | None:intergenic | 35.0% | |
| CATAAACCTATCAATGCAGA+TGG | + | chr7.1:59632408-59632427 | MS.gene46537:intron | 35.0% | |
| CATCAACATATTCACATGGA+AGG | + | chr7.1:59630832-59630851 | MS.gene46537:intron | 35.0% | |
| CCAAAAATGTGAACTTCATC+AGG | - | chr7.1:59630011-59630030 | None:intergenic | 35.0% | |
| CGAATTTGTCCAATGGAAAA+AGG | + | chr7.1:59633592-59633611 | MS.gene46537:intron | 35.0% | |
| CTTGCAGATAGTATTTAGAG+AGG | + | chr7.1:59631849-59631868 | MS.gene46537:intron | 35.0% | |
| GACAAGAAATACTGTAGCAT+TGG | + | chr7.1:59631278-59631297 | MS.gene46537:intron | 35.0% | |
| GATGTCTTGTAAATTCTGAC+TGG | + | chr7.1:59630441-59630460 | MS.gene46537:intron | 35.0% | |
| GCTTATAAGACTTGTCAATC+AGG | + | chr7.1:59634419-59634438 | MS.gene46537:intron | 35.0% | |
| GGCATAGTTGTTCACATTAT+GGG | - | chr7.1:59633978-59633997 | None:intergenic | 35.0% | |
| GTAGAAAGAAGAGATAGCAT+AGG | + | chr7.1:59629524-59629543 | MS.gene46537:CDS | 35.0% | |
| GTAGCATCAACATATTCACA+TGG | + | chr7.1:59630828-59630847 | MS.gene46537:intron | 35.0% | |
| GTGAACTAGACTTGTCATAT+GGG | + | chr7.1:59634287-59634306 | MS.gene46537:CDS | 35.0% | |
| GTTGTTCTTGGACAATATGA+AGG | + | chr7.1:59632884-59632903 | MS.gene46537:CDS | 35.0% | |
| TAAAATATTCAGGAGACTGG+AGG | - | chr7.1:59632340-59632359 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr7.1:59634741-59634760 | None:intergenic | 35.0% | |
| TGGCATAGTTGTTCACATTA+TGG | - | chr7.1:59633979-59633998 | None:intergenic | 35.0% | |
| TGTGTTAGTCATATGTAGGT+TGG | + | chr7.1:59630953-59630972 | MS.gene46537:intron | 35.0% | |
| TTCCTCTTATTAGCTGATCT+TGG | + | chr7.1:59631364-59631383 | MS.gene46537:intron | 35.0% | |
| TTCCTTTCATTGTGAAAGCA+GGG | + | chr7.1:59633320-59633339 | MS.gene46537:CDS | 35.0% | |
| ! | ATGGCTGTATATGCTTTAGA+AGG | + | chr7.1:59630724-59630743 | MS.gene46537:intron | 35.0% |
| ! | ATTCTAGAAAGGCAGAGATT+CGG | + | chr7.1:59633353-59633372 | MS.gene46537:CDS | 35.0% |
| ! | CAACAGAAACCTTTTTCCAT+TGG | - | chr7.1:59633604-59633623 | None:intergenic | 35.0% |
| ! | CCTGATGAAGTTCACATTTT+TGG | + | chr7.1:59630008-59630027 | MS.gene46537:CDS | 35.0% |
| ! | GGGAGACAGAATGATTATTT+TGG | - | chr7.1:59630468-59630487 | None:intergenic | 35.0% |
| ! | GGTGAGAATATCGTGATTTT+TGG | + | chr7.1:59630081-59630100 | MS.gene46537:intron | 35.0% |
| ! | TTGTTTCTTGTTAGGCATCA+TGG | + | chr7.1:59635200-59635219 | MS.gene46537:intron | 35.0% |
| !! | CTCTGCCTTTCTAGAATTTA+GGG | - | chr7.1:59633350-59633369 | None:intergenic | 35.0% |
| !! | GATGTTTGATTTTCATACGC+GGG | + | chr7.1:59634095-59634114 | MS.gene46537:intron | 35.0% |
| !! | GGATGTTTGATTTTCATACG+CGG | + | chr7.1:59634094-59634113 | MS.gene46537:intron | 35.0% |
| !! | TAGTCTCTAAAATTGTCACG+AGG | + | chr7.1:59634870-59634889 | MS.gene46537:intron | 35.0% |
| !! | TCTCTGCCTTTCTAGAATTT+AGG | - | chr7.1:59633351-59633370 | None:intergenic | 35.0% |
| !!! | AACTATGCCACTTGTTTTAC+CGG | + | chr7.1:59633989-59634008 | MS.gene46537:intron | 35.0% |
| !!! | CATTAAGCGTTTTGATTTGC+AGG | + | chr7.1:59629974-59629993 | MS.gene46537:intron | 35.0% |
| !!! | GGTGGATATTTTGACCAATA+TGG | + | chr7.1:59631892-59631911 | MS.gene46537:CDS | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7.1:59634740-59634759 | MS.gene46537:intron | 35.0% |
| !!! | TTCACATTTTTGGCTATGCA+AGG | + | chr7.1:59630018-59630037 | MS.gene46537:CDS | 35.0% |
| AAAACCATCTGTTGCAGGTA+AGG | + | chr7.1:59632170-59632189 | MS.gene46537:intron | 40.0% | |
| AAACTGAATGGAACTACACC+TGG | + | chr7.1:59633140-59633159 | MS.gene46537:intron | 40.0% | |
| AATAACTCATCTGCTTCTGC+AGG | - | chr7.1:59635304-59635323 | None:intergenic | 40.0% | |
| AATCAGCTAAAGTCTAGCCA+AGG | - | chr7.1:59629828-59629847 | None:intergenic | 40.0% | |
| AATCGTAGTTGCAAAAGTCG+GGG | - | chr7.1:59632948-59632967 | None:intergenic | 40.0% | |
| AATGTTCACGAATCAAGACG+TGG | - | chr7.1:59635162-59635181 | None:intergenic | 40.0% | |
| ACACTCTCTATTGTTGTGCT+TGG | + | chr7.1:59629587-59629606 | MS.gene46537:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7.1:59634747-59634766 | None:intergenic | 40.0% | |
| ACTCAAGTTTGAATCCTGAC+TGG | + | chr7.1:59629796-59629815 | MS.gene46537:intron | 40.0% | |
| AGATTCTAGATCCCTACCAA+AGG | - | chr7.1:59631419-59631438 | None:intergenic | 40.0% | |
| AGCTATCTTGTTCCAGAGAA+AGG | + | chr7.1:59630326-59630345 | MS.gene46537:intron | 40.0% | |
| ATCAAGCAAAGAACCTGAGT+TGG | - | chr7.1:59632492-59632511 | None:intergenic | 40.0% | |
| ATGGATTCCTCCTACCTTAT+AGG | + | chr7.1:59635360-59635379 | MS.gene46537:CDS | 40.0% | |
| CACCAAGATCAGCTAATAAG+AGG | - | chr7.1:59631369-59631388 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr7.1:59634746-59634765 | None:intergenic | 40.0% | |
| CATATGGGCAACGATATCAA+GGG | + | chr7.1:59634302-59634321 | MS.gene46537:CDS | 40.0% | |
| CATCAATCACTTGAGTCGAA+CGG | - | chr7.1:59629743-59629762 | None:intergenic | 40.0% | |
| CATTCAAAACCATCTGTTGC+AGG | + | chr7.1:59632165-59632184 | MS.gene46537:CDS | 40.0% | |
| CATTCGAGATGAGAAAGTGA+AGG | + | chr7.1:59632548-59632567 | MS.gene46537:CDS | 40.0% | |
| CCAAGATTGATGTAGAGAAC+AGG | - | chr7.1:59633492-59633511 | None:intergenic | 40.0% | |
| CCTGTTCTCTACATCAATCT+TGG | + | chr7.1:59633489-59633508 | MS.gene46537:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr7.1:59634715-59634734 | None:intergenic | 40.0% | |
| CTCTTATTAGCTGATCTTGG+TGG | + | chr7.1:59631367-59631386 | MS.gene46537:intron | 40.0% | |
| GAAGAACTCAGTACTCAGAT+TGG | + | chr7.1:59631442-59631461 | MS.gene46537:CDS | 40.0% | |
| GAAGTTCACCAATGAGTCTA+TGG | + | chr7.1:59634562-59634581 | MS.gene46537:intron | 40.0% | |
| GAATCGTAGTTGCAAAAGTC+GGG | - | chr7.1:59632949-59632968 | None:intergenic | 40.0% | |
| GATAAATGGTGATAGACAGC+TGG | - | chr7.1:59630405-59630424 | None:intergenic | 40.0% | |
| GATTCTAGATCCCTACCAAA+GGG | - | chr7.1:59631418-59631437 | None:intergenic | 40.0% | |
| GCGGATACACAATGAAAGAT+GGG | + | chr7.1:59632970-59632989 | MS.gene46537:CDS | 40.0% | |
| GCTGGATATGTTCAAACACA+TGG | + | chr7.1:59635331-59635350 | MS.gene46537:CDS | 40.0% | |
| GGTTCTTTGCTTGATTGCTA+TGG | + | chr7.1:59632497-59632516 | MS.gene46537:intron | 40.0% | |
| GTTCAATTCAAGGATGTTCC+TGG | + | chr7.1:59633376-59633395 | MS.gene46537:CDS | 40.0% | |
| GTTCCTTTCATTGTGAAAGC+AGG | + | chr7.1:59633319-59633338 | MS.gene46537:CDS | 40.0% | |
| TATTAGCTGATCTTGGTGGA+TGG | + | chr7.1:59631371-59631390 | MS.gene46537:intron | 40.0% | |
| TCATATGGGCAACGATATCA+AGG | + | chr7.1:59634301-59634320 | MS.gene46537:CDS | 40.0% | |
| TGACGTAGCTTAACTGTAGT+TGG | + | chr7.1:59630794-59630813 | MS.gene46537:intron | 40.0% | |
| TGCAGGAAATGTCTTCTTCT+TGG | - | chr7.1:59629630-59629649 | None:intergenic | 40.0% | |
| TGCGGATACACAATGAAAGA+TGG | + | chr7.1:59632969-59632988 | MS.gene46537:CDS | 40.0% | |
| TGTCTGACAATGATACGTGT+CGG | + | chr7.1:59633177-59633196 | MS.gene46537:intron | 40.0% | |
| TGTTCGCAGAGACGAATTAA+AGG | + | chr7.1:59635105-59635124 | MS.gene46537:CDS | 40.0% | |
| TGTTGAGAAACCCTTTGGTA+GGG | + | chr7.1:59631405-59631424 | MS.gene46537:CDS | 40.0% | |
| TGTTGAGATCATAATGCACC+TGG | + | chr7.1:59632311-59632330 | MS.gene46537:intron | 40.0% | |
| TTAAGTGACTGTAAGGTCAC+AGG | - | chr7.1:59634784-59634803 | None:intergenic | 40.0% | |
| TTCCCTGCTTTCACAATGAA+AGG | - | chr7.1:59633325-59633344 | None:intergenic | 40.0% | |
| TTGAATCGTCAGGTACAGTT+GGG | - | chr7.1:59632922-59632941 | None:intergenic | 40.0% | |
| TTGATCATCTTGCAAACGGA+TGG | - | chr7.1:59630647-59630666 | None:intergenic | 40.0% | |
| TTGTTGAGAAACCCTTTGGT+AGG | + | chr7.1:59631404-59631423 | MS.gene46537:CDS | 40.0% | |
| TTTCATTGTGAAAGCAGGGA+AGG | + | chr7.1:59633324-59633343 | MS.gene46537:CDS | 40.0% | |
| TTTGAATCGTCAGGTACAGT+TGG | - | chr7.1:59632923-59632942 | None:intergenic | 40.0% | |
| ! | AGAGATTCGGGTTCAATTCA+AGG | + | chr7.1:59633366-59633385 | MS.gene46537:CDS | 40.0% |
| ! | ATGTTCCTGGTGACATTTTC+AGG | + | chr7.1:59633389-59633408 | MS.gene46537:CDS | 40.0% |
| ! | ATTCACATGGAAGGCTTGTT+CGG | + | chr7.1:59630841-59630860 | MS.gene46537:intron | 40.0% |
| ! | CTTTTGCAACTACGATTCTG+CGG | + | chr7.1:59632951-59632970 | MS.gene46537:CDS | 40.0% |
| ! | GAAGGCCCTAAATTCTAGAA+AGG | + | chr7.1:59633342-59633361 | MS.gene46537:CDS | 40.0% |
| ! | GCACTGACACTTCAGATTAA+AGG | - | chr7.1:59633215-59633234 | None:intergenic | 40.0% |
| ! | GCTTTACCTGACATTAGTCT+AGG | + | chr7.1:59630980-59630999 | MS.gene46537:intron | 40.0% |
| ! | GTTGTTGTTGAGAAACCCTT+TGG | + | chr7.1:59631400-59631419 | MS.gene46537:CDS | 40.0% |
| ! | TAGCTTCTGAAGGTTGTAGA+CGG | - | chr7.1:59633917-59633936 | None:intergenic | 40.0% |
| ! | TGAAGATGGATTTCGCTTGT+TGG | + | chr7.1:59630529-59630548 | MS.gene46537:CDS | 40.0% |
| ! | TGCATATTTTCCACCAACTC+AGG | + | chr7.1:59632476-59632495 | MS.gene46537:intron | 40.0% |
| ! | TTCTAGAAAGGCAGAGATTC+GGG | + | chr7.1:59633354-59633373 | MS.gene46537:CDS | 40.0% |
| !!! | AGAGAGGATTTTGGAACTGA+TGG | + | chr7.1:59631865-59631884 | MS.gene46537:CDS | 40.0% |
| AAATGCAGCACATCATCCCA+AGG | - | chr7.1:59633659-59633678 | None:intergenic | 45.0% | |
| ACTTGAGTCGAACGGCTAAT+TGG | - | chr7.1:59629735-59629754 | None:intergenic | 45.0% | |
| AGGCAATCCGGTAAAACAAG+TGG | - | chr7.1:59633999-59634018 | None:intergenic | 45.0% | |
| ATCCTGACTGGAACAATCCT+TGG | + | chr7.1:59629808-59629827 | MS.gene46537:intron | 45.0% | |
| ATGTGGTTGTGGTTCCAAAG+AGG | - | chr7.1:59631695-59631714 | None:intergenic | 45.0% | |
| ATTAGACGCTCATAAGCCTC+TGG | - | chr7.1:59634337-59634356 | None:intergenic | 45.0% | |
| CAAACGGATGGATACACTGA+AGG | - | chr7.1:59630635-59630654 | None:intergenic | 45.0% | |
| CAACCACATTGACAATGTGC+AGG | + | chr7.1:59631706-59631725 | MS.gene46537:CDS | 45.0% | |
| CTTATGCTTGTCTTGCATGC+AGG | + | chr7.1:59634228-59634247 | MS.gene46537:intron | 45.0% | |
| CTTGAGTTATCCCGAACGAT+TGG | - | chr7.1:59629783-59629802 | None:intergenic | 45.0% | |
| GCACATTGTCAATGTGGTTG+TGG | - | chr7.1:59631706-59631725 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr7.1:59634716-59634735 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7.1:59634719-59634738 | None:intergenic | 45.0% | |
| GTACTCCTGAAAATGTCACC+AGG | - | chr7.1:59633397-59633416 | None:intergenic | 45.0% | |
| TCAAGGGATAACCATTCCAG+AGG | + | chr7.1:59634318-59634337 | MS.gene46537:CDS | 45.0% | |
| TCAAGTACCTCTCTTGCTAC+AGG | - | chr7.1:59629560-59629579 | None:intergenic | 45.0% | |
| TCACCTGCACATTGTCAATG+TGG | - | chr7.1:59631712-59631731 | None:intergenic | 45.0% | |
| TCGTATTAAGAAGGACCGAG+TGG | - | chr7.1:59631626-59631645 | None:intergenic | 45.0% | |
| TGAATCTCCTGTAGCAAGAG+AGG | + | chr7.1:59629550-59629569 | MS.gene46537:CDS | 45.0% | |
| TGGCTATGCATCGTAGTACA+TGG | + | chr7.1:59630101-59630120 | MS.gene46537:intron | 45.0% | |
| TGTGGTATCTACGTTAGCCA+AGG | - | chr7.1:59631777-59631796 | None:intergenic | 45.0% | |
| TTCTCATCTCGAATGTGCTC+AGG | - | chr7.1:59632543-59632562 | None:intergenic | 45.0% | |
| TTGTAGTATTGCTGGAGGGA+GGG | + | chr7.1:59630749-59630768 | MS.gene46537:intron | 45.0% | |
| ! | AAGCAAAGAACCTGAGTTGG+TGG | - | chr7.1:59632489-59632508 | None:intergenic | 45.0% |
| ! | AGAAGGCCTTGTAGTATTGC+TGG | + | chr7.1:59630741-59630760 | MS.gene46537:intron | 45.0% |
| ! | ATCGGTTCTTCTTGCCTCTT+TGG | + | chr7.1:59631678-59631697 | MS.gene46537:CDS | 45.0% |
| ! | GGCCCTTATGATTCTGAAGA+TGG | + | chr7.1:59630515-59630534 | MS.gene46537:CDS | 45.0% |
| ! | TGGGATGATGTGCTGCATTT+TGG | + | chr7.1:59633659-59633678 | MS.gene46537:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7.1:59634751-59634770 | MS.gene46537:intron | 45.0% |
| !! | ATTGTTGTGCTTGGTGCTTC+TGG | + | chr7.1:59629596-59629615 | MS.gene46537:CDS | 45.0% |
| !! | GCAAGAGAGGTACTTGAAAC+TGG | + | chr7.1:59629563-59629582 | MS.gene46537:CDS | 45.0% |
| !! | TTAGGAGAAGCACCTTTCTC+TGG | - | chr7.1:59630341-59630360 | None:intergenic | 45.0% |
| !!! | GATTTTGGAACTGATGGTCG+TGG | + | chr7.1:59631871-59631890 | MS.gene46537:CDS | 45.0% |
| !!! | TGTTTTTATATTTATTTTTA+TGG | + | chr7.1:59630705-59630724 | MS.gene46537:intron | 5.0% |
| AAGGCCTTACCTGCAACAGA+TGG | - | chr7.1:59632177-59632196 | None:intergenic | 50.0% | |
| AAGGTCACAGGTTCAAGTCC+TGG | - | chr7.1:59634772-59634791 | None:intergenic | 50.0% | |
| ACGGATGGATACACTGAAGG+AGG | - | chr7.1:59630632-59630651 | None:intergenic | 50.0% | |
| ACTGCAGACATTTCCAGTCC+AGG | - | chr7.1:59634262-59634281 | None:intergenic | 50.0% | |
| AGCCAAGGATTGTTCCAGTC+AGG | - | chr7.1:59629813-59629832 | None:intergenic | 50.0% | |
| CCACAGCCTAGACTAATGTC+AGG | - | chr7.1:59630989-59631008 | None:intergenic | 50.0% | |
| CGTGCTGCATTGAAATGTGC+AGG | + | chr7.1:59632826-59632845 | MS.gene46537:intron | 50.0% | |
| CTCCCTCCAGCAATACTACA+AGG | - | chr7.1:59630750-59630769 | None:intergenic | 50.0% | |
| CTTGTAGTATTGCTGGAGGG+AGG | + | chr7.1:59630748-59630767 | MS.gene46537:intron | 50.0% | |
| GTAAAGAGGGTTCATCTCGG+AGG | + | chr7.1:59630588-59630607 | MS.gene46537:CDS | 50.0% | |
| GTGCTCAGGCTTGAGAGAAA+CGG | - | chr7.1:59632529-59632548 | None:intergenic | 50.0% | |
| TCTGTCTCCCCCTTGCTTAT+AGG | + | chr7.1:59630478-59630497 | MS.gene46537:intron | 50.0% | |
| TGATAGAGGGGAGTTGAAGC+CGG | + | chr7.1:59635252-59635271 | MS.gene46537:CDS | 50.0% | |
| TGCTCAGGCTTGAGAGAAAC+GGG | - | chr7.1:59632528-59632547 | None:intergenic | 50.0% | |
| ! | ACGCTCATAAGCCTCTGGAA+TGG | - | chr7.1:59634332-59634351 | None:intergenic | 50.0% |
| ! | AGGCCTTGTAGTATTGCTGG+AGG | + | chr7.1:59630744-59630763 | MS.gene46537:intron | 50.0% |
| ! | CCTGACATTAGTCTAGGCTG+TGG | + | chr7.1:59630986-59631005 | MS.gene46537:intron | 50.0% |
| ! | GGCCTTGTAGTATTGCTGGA+GGG | + | chr7.1:59630745-59630764 | MS.gene46537:intron | 50.0% |
| ! | TTTGGAACTGATGGTCGTGG+TGG | + | chr7.1:59631874-59631893 | MS.gene46537:CDS | 50.0% |
| !! | TACACCTGGCAGTGTCGTTT+CGG | + | chr7.1:59633154-59633173 | MS.gene46537:intron | 50.0% |
| ACATACGCAGGGTCCAGGAA+GGG | + | chr7.1:59634687-59634706 | MS.gene46537:intron | 55.0% | |
| ACTGAAGCTCCCACATACGC+AGG | + | chr7.1:59634675-59634694 | MS.gene46537:intron | 55.0% | |
| ATGTGGGAGCTTCAGTGCAC+CGG | - | chr7.1:59634671-59634690 | None:intergenic | 55.0% | |
| CCTTACAAGCCGGGAAGTAG+AGG | + | chr7.1:59635277-59635296 | MS.gene46537:CDS | 55.0% | |
| CTGAAGCTCCCACATACGCA+GGG | + | chr7.1:59634676-59634695 | MS.gene46537:intron | 55.0% | |
| GAGGGAGGGCTCAGGAAAAT+TGG | + | chr7.1:59630763-59630782 | MS.gene46537:intron | 55.0% | |
| TCAGGAGACTGGAGGTTACC+AGG | - | chr7.1:59632332-59632351 | None:intergenic | 55.0% | |
| TCTGCAGGACCTCTACTTCC+CGG | - | chr7.1:59635289-59635308 | None:intergenic | 55.0% | |
| TGCATGCAGGTCAAGCAACC+TGG | + | chr7.1:59634241-59634260 | MS.gene46537:intron | 55.0% | |
| TTCCTGGACCCTGCGTATGT+GGG | - | chr7.1:59634687-59634706 | None:intergenic | 55.0% | |
| ! | AAGCCGGTTCCTTACAAGCC+GGG | + | chr7.1:59635268-59635287 | MS.gene46537:CDS | 55.0% |
| ! | CCTCTACTTCCCGGCTTGTA+AGG | - | chr7.1:59635280-59635299 | None:intergenic | 55.0% |
| ! | CTTCCCGGCTTGTAAGGAAC+CGG | - | chr7.1:59635274-59635293 | None:intergenic | 55.0% |
| ! | GAAGCCGGTTCCTTACAAGC+CGG | + | chr7.1:59635267-59635286 | MS.gene46537:CDS | 55.0% |
| ! | GTCGGGGTGTTTGAATCGTC+AGG | - | chr7.1:59632932-59632951 | None:intergenic | 55.0% |
| CACATACGCAGGGTCCAGGA+AGG | + | chr7.1:59634686-59634705 | MS.gene46537:intron | 60.0% | |
| CAGGAAGGGGTCCCACCATT+TGG | + | chr7.1:59634701-59634720 | MS.gene46537:intron | 60.0% | |
| CATACGCAGGGTCCAGGAAG+GGG | + | chr7.1:59634688-59634707 | MS.gene46537:intron | 60.0% | |
| CGGATGCGACACGTTGACAC+AGG | - | chr7.1:59630922-59630941 | None:intergenic | 60.0% | |
| CTTCCTGGACCCTGCGTATG+TGG | - | chr7.1:59634688-59634707 | None:intergenic | 60.0% | |
| GACACCGAAACGACACTGCC+AGG | - | chr7.1:59633161-59633180 | None:intergenic | 60.0% | |
| GCAGGTCAAGCAACCTGGAC+TGG | + | chr7.1:59634246-59634265 | MS.gene46537:intron | 60.0% | |
| TATTGCTGGAGGGAGGGCTC+AGG | + | chr7.1:59630755-59630774 | MS.gene46537:intron | 60.0% | |
| TGTGGGAGCTTCAGTGCACC+GGG | - | chr7.1:59634670-59634689 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+TGG | - | chr7.1:59634703-59634722 | None:intergenic | 60.0% |
| CTCCCACATACGCAGGGTCC+AGG | + | chr7.1:59634682-59634701 | MS.gene46537:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 59629503 | 59635381 | 59629503 | ID=MS.gene46537 |
| chr7.1 | mRNA | 59629503 | 59635381 | 59629503 | ID=MS.gene46537.t1;Parent=MS.gene46537 |
| chr7.1 | exon | 59629503 | 59629670 | 59629503 | ID=MS.gene46537.t1.exon1;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59629503 | 59629670 | 59629503 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59629996 | 59630081 | 59629996 | ID=MS.gene46537.t1.exon2;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59629996 | 59630081 | 59629996 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59630328 | 59630394 | 59630328 | ID=MS.gene46537.t1.exon3;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59630328 | 59630394 | 59630328 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59630500 | 59630686 | 59630500 | ID=MS.gene46537.t1.exon4;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59630500 | 59630686 | 59630500 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59631377 | 59631534 | 59631377 | ID=MS.gene46537.t1.exon5;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59631377 | 59631534 | 59631377 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59631659 | 59631727 | 59631659 | ID=MS.gene46537.t1.exon6;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59631659 | 59631727 | 59631659 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59631856 | 59631914 | 59631856 | ID=MS.gene46537.t1.exon7;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59631856 | 59631914 | 59631856 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59632150 | 59632186 | 59632150 | ID=MS.gene46537.t1.exon8;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59632150 | 59632186 | 59632150 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59632498 | 59632569 | 59632498 | ID=MS.gene46537.t1.exon9;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59632498 | 59632569 | 59632498 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59632848 | 59632995 | 59632848 | ID=MS.gene46537.t1.exon10;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59632848 | 59632995 | 59632848 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59633317 | 59633412 | 59633317 | ID=MS.gene46537.t1.exon11;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59633317 | 59633412 | 59633317 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59633883 | 59633953 | 59633883 | ID=MS.gene46537.t1.exon12;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59633883 | 59633953 | 59633883 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59634250 | 59634365 | 59634250 | ID=MS.gene46537.t1.exon13;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59634250 | 59634365 | 59634250 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59635081 | 59635126 | 59635081 | ID=MS.gene46537.t1.exon14;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59635081 | 59635126 | 59635081 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| chr7.1 | exon | 59635214 | 59635381 | 59635214 | ID=MS.gene46537.t1.exon15;Parent=MS.gene46537.t1 |
| chr7.1 | CDS | 59635214 | 59635381 | 59635214 | ID=cds.MS.gene46537.t1;Parent=MS.gene46537.t1 |
| Gene Sequence |
| Protein sequence |
