Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47280.t1 | XP_013451520.1 | 97 | 1013 | 26 | 2 | 1 | 1013 | 1 | 1009 | 0.00E+00 | 1734.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47280.t1 | B8XCH5 | 50.3 | 1081 | 444 | 16 | 10 | 1013 | 17 | 1081 | 1.0e-238 | 828.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47280.t1 | A0A072U8X0 | 97.0 | 1013 | 26 | 2 | 1 | 1013 | 1 | 1009 | 0.0e+00 | 1734.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene47280 | 0.814529 | 1.47E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene47280 | 0.853194 | 2.81E-61 | -1.69E-46 |
| MS.gene050297 | MS.gene47280 | 0.883016 | 6.41E-71 | -1.69E-46 |
| MS.gene050310 | MS.gene47280 | 0.808306 | 3.30E-50 | -1.69E-46 |
| MS.gene050648 | MS.gene47280 | 0.832674 | 8.26E-56 | -1.69E-46 |
| MS.gene051263 | MS.gene47280 | 0.849902 | 2.40E-60 | -1.69E-46 |
| MS.gene051478 | MS.gene47280 | 0.818578 | 1.82E-52 | -1.69E-46 |
| MS.gene051629 | MS.gene47280 | 0.809405 | 1.92E-50 | -1.69E-46 |
| MS.gene051698 | MS.gene47280 | 0.83237 | 9.83E-56 | -1.69E-46 |
| MS.gene052143 | MS.gene47280 | 0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene47280 | 0.829844 | 4.10E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene47280 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene053417 | MS.gene47280 | 0.82221 | 2.68E-53 | -1.69E-46 |
| MS.gene054643 | MS.gene47280 | 0.860312 | 2.26E-63 | -1.69E-46 |
| MS.gene055331 | MS.gene47280 | 0.834697 | 2.58E-56 | -1.69E-46 |
| MS.gene055764 | MS.gene47280 | 0.830998 | 2.14E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene47280 | 0.813285 | 2.77E-51 | -1.69E-46 |
| MS.gene058197 | MS.gene47280 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene058198 | MS.gene47280 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene058818 | MS.gene47280 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene058844 | MS.gene47280 | 0.832059 | 1.17E-55 | -1.69E-46 |
| MS.gene059300 | MS.gene47280 | 0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene06057 | MS.gene47280 | 0.858542 | 7.67E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene47280 | 0.805846 | 1.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47280.t1 | MTR_6g027540 | 97.236 | 1013 | 24 | 2 | 1 | 1013 | 1 | 1009 | 0.0 | 2017 |
| MS.gene47280.t1 | MTR_4g107850 | 45.920 | 1054 | 492 | 22 | 8 | 1013 | 15 | 1038 | 0.0 | 899 |
| MS.gene47280.t1 | MTR_5g010390 | 43.690 | 1046 | 503 | 22 | 11 | 1013 | 5 | 1007 | 0.0 | 853 |
| MS.gene47280.t1 | MTR_6g028050 | 42.938 | 1055 | 526 | 23 | 6 | 1013 | 1 | 1026 | 0.0 | 831 |
| MS.gene47280.t1 | MTR_8g031270 | 41.905 | 1050 | 512 | 20 | 11 | 1013 | 5 | 1003 | 0.0 | 822 |
| MS.gene47280.t1 | MTR_7g092770 | 51.232 | 771 | 324 | 13 | 272 | 1013 | 28 | 775 | 0.0 | 784 |
| MS.gene47280.t1 | MTR_0305s0020 | 51.432 | 768 | 325 | 12 | 272 | 1013 | 29 | 774 | 0.0 | 782 |
| MS.gene47280.t1 | MTR_7g076900 | 41.801 | 1055 | 524 | 23 | 7 | 1013 | 1 | 1013 | 0.0 | 771 |
| MS.gene47280.t1 | MTR_0291s0010 | 48.642 | 773 | 345 | 14 | 272 | 1013 | 46 | 797 | 0.0 | 747 |
| MS.gene47280.t1 | MTR_4g066150 | 49.741 | 772 | 342 | 15 | 264 | 1013 | 23 | 770 | 0.0 | 745 |
| MS.gene47280.t1 | MTR_4g023460 | 48.638 | 771 | 346 | 14 | 272 | 1013 | 393 | 1142 | 0.0 | 737 |
| MS.gene47280.t1 | MTR_4g023460 | 46.512 | 129 | 69 | 0 | 11 | 139 | 2 | 130 | 9.46e-29 | 125 |
| MS.gene47280.t1 | MTR_3g027150 | 48.325 | 776 | 346 | 14 | 272 | 1013 | 68 | 822 | 0.0 | 736 |
| MS.gene47280.t1 | MTR_4g057675 | 41.985 | 786 | 389 | 14 | 263 | 1013 | 30 | 783 | 0.0 | 600 |
| MS.gene47280.t1 | MTR_4g071870 | 40.585 | 786 | 366 | 16 | 263 | 1013 | 30 | 749 | 0.0 | 571 |
| MS.gene47280.t1 | MTR_1g015540 | 40.467 | 771 | 390 | 16 | 275 | 1007 | 28 | 767 | 8.03e-174 | 527 |
| MS.gene47280.t1 | MTR_5g096980 | 33.639 | 764 | 454 | 15 | 276 | 1013 | 27 | 763 | 1.01e-141 | 443 |
| MS.gene47280.t1 | MTR_4g023250 | 51.538 | 130 | 61 | 1 | 883 | 1012 | 1 | 128 | 4.91e-40 | 144 |
| MS.gene47280.t1 | MTR_6g028070 | 49.275 | 138 | 69 | 1 | 6 | 142 | 1 | 138 | 8.86e-40 | 147 |
| MS.gene47280.t1 | MTR_4g033215 | 41.085 | 129 | 66 | 4 | 9 | 134 | 1 | 122 | 8.56e-18 | 89.7 |
| MS.gene47280.t1 | MTR_4g023390 | 41.489 | 94 | 33 | 1 | 896 | 989 | 26 | 97 | 4.64e-16 | 75.1 |
| MS.gene47280.t1 | MTR_4g023230 | 32.800 | 125 | 63 | 2 | 800 | 921 | 49 | 155 | 1.43e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47280.t1 | AT3G03680 | 69.485 | 1029 | 273 | 15 | 9 | 1013 | 6 | 1017 | 0.0 | 1401 |
| MS.gene47280.t1 | AT4G11610 | 43.624 | 1043 | 516 | 19 | 6 | 1013 | 2 | 1007 | 0.0 | 867 |
| MS.gene47280.t1 | AT4G11610 | 43.457 | 1047 | 516 | 19 | 6 | 1013 | 2 | 1011 | 0.0 | 866 |
| MS.gene47280.t1 | AT5G17980 | 42.740 | 1095 | 494 | 32 | 6 | 1013 | 1 | 1049 | 0.0 | 834 |
| MS.gene47280.t1 | AT5G48060 | 43.097 | 1072 | 500 | 23 | 11 | 1013 | 6 | 1036 | 0.0 | 833 |
| MS.gene47280.t1 | AT1G04150 | 44.004 | 1034 | 515 | 21 | 11 | 1013 | 12 | 1012 | 0.0 | 825 |
| MS.gene47280.t1 | AT1G22610 | 41.082 | 1054 | 547 | 18 | 9 | 1013 | 1 | 1029 | 0.0 | 795 |
| MS.gene47280.t1 | AT3G57880 | 50.911 | 768 | 328 | 13 | 272 | 1013 | 29 | 773 | 0.0 | 777 |
| MS.gene47280.t1 | AT3G57880 | 50.911 | 768 | 328 | 13 | 272 | 1013 | 29 | 773 | 0.0 | 777 |
| MS.gene47280.t1 | AT3G57880 | 50.911 | 768 | 328 | 13 | 272 | 1013 | 29 | 773 | 0.0 | 777 |
| MS.gene47280.t1 | AT3G57880 | 50.911 | 768 | 328 | 13 | 272 | 1013 | 29 | 773 | 0.0 | 777 |
| MS.gene47280.t1 | AT5G12970 | 50.525 | 762 | 335 | 12 | 272 | 1013 | 30 | 769 | 0.0 | 775 |
| MS.gene47280.t1 | AT1G51570 | 49.091 | 770 | 342 | 13 | 272 | 1013 | 29 | 776 | 0.0 | 757 |
| MS.gene47280.t1 | AT4G11610 | 44.649 | 869 | 420 | 16 | 170 | 1013 | 42 | 874 | 0.0 | 747 |
| MS.gene47280.t1 | AT4G00700 | 40.173 | 1043 | 543 | 20 | 11 | 1013 | 5 | 1006 | 0.0 | 738 |
| MS.gene47280.t1 | AT4G00700 | 40.173 | 1043 | 543 | 20 | 11 | 1013 | 5 | 1006 | 0.0 | 738 |
| MS.gene47280.t1 | AT5G06850 | 47.933 | 774 | 348 | 14 | 272 | 1013 | 44 | 794 | 0.0 | 729 |
| MS.gene47280.t1 | AT3G61300 | 39.461 | 1039 | 531 | 25 | 6 | 1013 | 1 | 972 | 0.0 | 709 |
| MS.gene47280.t1 | AT4G20080 | 46.003 | 763 | 367 | 13 | 272 | 1013 | 36 | 774 | 0.0 | 669 |
| MS.gene47280.t1 | AT3G61720 | 33.833 | 801 | 429 | 24 | 272 | 1010 | 31 | 792 | 6.92e-127 | 405 |
| MS.gene47280.t1 | AT5G03435 | 35.371 | 769 | 406 | 27 | 272 | 1007 | 30 | 740 | 6.04e-124 | 395 |
| MS.gene47280.t1 | AT5G03435 | 36.140 | 570 | 293 | 19 | 272 | 813 | 30 | 556 | 3.10e-96 | 316 |
| MS.gene47280.t1 | AT5G44760 | 38.619 | 391 | 186 | 12 | 263 | 644 | 19 | 364 | 3.30e-68 | 236 |
| MS.gene47280.t1 | AT1G74720 | 57.895 | 133 | 53 | 1 | 10 | 139 | 17 | 149 | 1.37e-41 | 166 |
Find 229 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCTGTGCCGTTTAA+AGG | 0.159382 | 6.4:+2348736 | MS.gene47280:CDS |
| TCTGCTGGAGTTTCTTCTTT+TGG | 0.208232 | 6.4:-2346026 | None:intergenic |
| GTCCTAGTTCGAACCCATTT+TGG | 0.213836 | 6.4:-2347755 | None:intergenic |
| CAGCTGGGTTTGGGTGGTTT+GGG | 0.228556 | 6.4:+2346806 | MS.gene47280:CDS |
| AGCTCGGTCTGAACCGGCTT+TGG | 0.243409 | 6.4:+2348171 | MS.gene47280:CDS |
| GATTGGAAGCTTTGTTTAGT+TGG | 0.245110 | 6.4:+2348656 | MS.gene47280:CDS |
| CATATTCGTGCTTGTTTAGA+AGG | 0.246593 | 6.4:+2347545 | MS.gene47280:CDS |
| ACAGCTGGGTTTGGGTGGTT+TGG | 0.253899 | 6.4:+2346805 | MS.gene47280:CDS |
| GTTTAAAGGGTTTGTGCTTT+TGG | 0.255765 | 6.4:+2348750 | MS.gene47280:CDS |
| TGTTCCACGTGTCCCGTCTT+TGG | 0.300966 | 6.4:-2347702 | None:intergenic |
| TAATGCATTCTTGGTAGAAT+TGG | 0.304819 | 6.4:-2348076 | None:intergenic |
| GGTTTAACATAATGCATTCT+TGG | 0.306858 | 6.4:-2348085 | None:intergenic |
| CCAGGATTTACAGCTGGGTT+TGG | 0.309363 | 6.4:+2346796 | MS.gene47280:CDS |
| GATAGGGTGCGTGCTCTTGC+GGG | 0.324280 | 6.4:+2348589 | MS.gene47280:CDS |
| GCGAATTGGTTTAGATTAGT+TGG | 0.335655 | 6.4:+2348259 | MS.gene47280:CDS |
| GCTGTTCCTTGACCGTCTTT+TGG | 0.344445 | 6.4:-2345504 | None:intergenic |
| GCTCGGTCTGAACCGGCTTT+GGG | 0.345208 | 6.4:+2348172 | MS.gene47280:CDS |
| GTTTCGAATTCAAGATCAAT+TGG | 0.348596 | 6.4:+2347004 | MS.gene47280:CDS |
| GCTTATGTGGTGGCGAAATA+TGG | 0.356278 | 6.4:+2347731 | MS.gene47280:CDS |
| TGGCGAAATATGGTCCAAAA+TGG | 0.360595 | 6.4:+2347741 | MS.gene47280:CDS |
| CTCACTATCACCGGCTGATT+CGG | 0.367845 | 6.4:-2345922 | None:intergenic |
| TCACCGGCTGATTCGGTTAC+CGG | 0.369695 | 6.4:-2345915 | None:intergenic |
| GATTGGCGATGTTGCAGCTC+AGG | 0.375492 | 6.4:+2348627 | MS.gene47280:CDS |
| TGAACTAAAACCGTTGTTGC+CGG | 0.377060 | 6.4:-2348343 | None:intergenic |
| CAGGATTTACAGCTGGGTTT+GGG | 0.378911 | 6.4:+2346797 | MS.gene47280:CDS |
| GAGTCGTGGCAGTCGGATTC+CGG | 0.386228 | 6.4:+2346695 | MS.gene47280:CDS |
| TTAGGAAAAGTTAAAATCTC+TGG | 0.386303 | 6.4:+2345714 | MS.gene47280:CDS |
| ATCCTCGGATCCATGTTCTT+TGG | 0.388714 | 6.4:-2348472 | None:intergenic |
| CCAATTGGTTTACTTGAAGT+TGG | 0.392682 | 6.4:+2347644 | MS.gene47280:CDS |
| TCCGGCGCCGGTGCAGTTGC+CGG | 0.396311 | 6.4:-2346086 | None:intergenic |
| TCTATGCTGTGCCGTTTAAA+GGG | 0.398920 | 6.4:+2348737 | MS.gene47280:CDS |
| GTGAAAGTGAAGGTAAAGAT+TGG | 0.399749 | 6.4:+2346387 | MS.gene47280:CDS |
| TCACCGGTTGAATCGGTAAC+AGG | 0.400370 | 6.4:-2345858 | None:intergenic |
| CCTTGCACGGTTCTCACAAT+TGG | 0.400687 | 6.4:+2347836 | MS.gene47280:CDS |
| CAATTGGTTTACTTGAAGTT+GGG | 0.401660 | 6.4:+2347645 | MS.gene47280:CDS |
| AACTGCACCGGCGCCGGAGG+TGG | 0.406115 | 6.4:+2346091 | MS.gene47280:CDS |
| TCGAGATGGTTTAATCTTTG+TGG | 0.409096 | 6.4:+2347088 | MS.gene47280:CDS |
| CTGTGGAAGTGGTTCGAATC+AGG | 0.410881 | 6.4:+2348563 | MS.gene47280:CDS |
| TTTACTATCCGTTAGAGAAA+AGG | 0.414602 | 6.4:+2345772 | MS.gene47280:CDS |
| CTTCTCATCACCGGCTGAAT+CGG | 0.414927 | 6.4:-2345970 | None:intergenic |
| TGCAGCTCAGGGCGAGAGAT+TGG | 0.417555 | 6.4:+2348639 | MS.gene47280:CDS |
| ATGACGTTATGATTGCAGTA+TGG | 0.419939 | 6.4:+2346642 | MS.gene47280:CDS |
| GAGTCCTGAGCTTTATGTTA+AGG | 0.421173 | 6.4:+2346847 | MS.gene47280:CDS |
| GTATACCATTGCGGTGCTAA+TGG | 0.421746 | 6.4:-2346593 | None:intergenic |
| CCAGCTGTAAATCCTGGGTT+TGG | 0.421812 | 6.4:-2346790 | None:intergenic |
| GGGAGGGCACAAAGTTTGAT+TGG | 0.422832 | 6.4:+2348610 | MS.gene47280:CDS |
| TGAGGAAAAGTAAAGCGAAT+TGG | 0.426414 | 6.4:+2348245 | MS.gene47280:CDS |
| GGTGCGTGCTCTTGCGGGGA+GGG | 0.427713 | 6.4:+2348594 | MS.gene47280:CDS |
| TAAACTTTCGCTCGTGTCTC+CGG | 0.428687 | 6.4:-2346728 | None:intergenic |
| CCAAACCCAGCTGTAAATCC+TGG | 0.433014 | 6.4:-2346796 | None:intergenic |
| AATTCGCACGTGGGTGAATC+CGG | 0.433417 | 6.4:+2348324 | MS.gene47280:CDS |
| CTACGTGGACATGGTAAGTT+TGG | 0.434355 | 6.4:+2348498 | MS.gene47280:CDS |
| GGTTCAGTTCATGCTTGATT+CGG | 0.439464 | 6.4:+2348204 | MS.gene47280:CDS |
| TCGTTTAGCTCGGTCTGAAC+CGG | 0.441535 | 6.4:+2348165 | MS.gene47280:CDS |
| ACATCCTTCGTTTCAGCTAC+CGG | 0.443201 | 6.4:-2346122 | None:intergenic |
| ACTTCCACAGACCTCATTGT+TGG | 0.444809 | 6.4:-2348550 | None:intergenic |
| ACTGTTGGTAGAATCAAATA+AGG | 0.446566 | 6.4:-2348394 | None:intergenic |
| GTCAATGACCTCTGAGACGA+TGG | 0.447157 | 6.4:+2345641 | MS.gene47280:CDS |
| CGATAGGGTGCGTGCTCTTG+CGG | 0.447912 | 6.4:+2348588 | MS.gene47280:CDS |
| CCAAACCCAGGATTTACAGC+TGG | 0.448616 | 6.4:+2346790 | MS.gene47280:CDS |
| ATGCATTATGTTAAACCATT+CGG | 0.448741 | 6.4:+2348091 | MS.gene47280:CDS |
| CAAGAGATTTGAATCCTCAA+TGG | 0.452098 | 6.4:+2345583 | MS.gene47280:CDS |
| TGCGGTGCTAATGGACTATC+CGG | 0.452139 | 6.4:-2346584 | None:intergenic |
| TTTCGAATTCAAGATCAATT+GGG | 0.452813 | 6.4:+2347005 | MS.gene47280:CDS |
| TGGAGCAACGAATCTTCTTC+CGG | 0.452951 | 6.4:+2347673 | MS.gene47280:CDS |
| TTATGATTGCAGTATGGATT+GGG | 0.454958 | 6.4:+2346648 | MS.gene47280:CDS |
| AGATGCTAGAGATGTTAGAA+TGG | 0.455686 | 6.4:+2347886 | MS.gene47280:CDS |
| GATGCTAGAGATGTTAGAAT+GGG | 0.456619 | 6.4:+2347887 | MS.gene47280:CDS |
| AACAATGAGGTCTGTGGAAG+TGG | 0.457588 | 6.4:+2348552 | MS.gene47280:CDS |
| CTATCCGGTGGAACTCTCTT+CGG | 0.457963 | 6.4:-2346569 | None:intergenic |
| TTCATGGTTGAGTTTAATGC+AGG | 0.457985 | 6.4:+2348042 | MS.gene47280:CDS |
| GAACTTGATGAAGAGTTTGA+TGG | 0.458680 | 6.4:+2348523 | MS.gene47280:CDS |
| TAAGGCTCAGCTTGGTGCAC+AGG | 0.461853 | 6.4:+2346865 | MS.gene47280:CDS |
| TGAGGTTTAGGAACAGAATG+AGG | 0.463797 | 6.4:+2348446 | MS.gene47280:CDS |
| TTACTTGAAGTTGGGATTCG+TGG | 0.464302 | 6.4:+2347653 | MS.gene47280:CDS |
| TTACCTGTTACCGATTCAAC+CGG | 0.466066 | 6.4:+2345855 | MS.gene47280:CDS |
| CTTCTTTAGAAGTTTCCGTT+TGG | 0.466514 | 6.4:+2346450 | MS.gene47280:CDS |
| ACAACGCGAACATATAGAAA+TGG | 0.467257 | 6.4:-2346278 | None:intergenic |
| CATTCCATCTCGGGTTAAAC+CGG | 0.467359 | 6.4:-2347787 | None:intergenic |
| GATGTTCGCTGTGTTCTGTT+TGG | 0.470972 | 6.4:+2348699 | MS.gene47280:CDS |
| GTGTATTGCTCATTCCATCT+CGG | 0.471544 | 6.4:-2347797 | None:intergenic |
| TTATGTTAAACCATTCGGTC+CGG | 0.472094 | 6.4:+2348096 | MS.gene47280:CDS |
| TGTATTGCTCATTCCATCTC+GGG | 0.473085 | 6.4:-2347796 | None:intergenic |
| AAAAGAAGAAAATACAAAAG+AGG | 0.474664 | 6.4:+2345995 | MS.gene47280:CDS |
| TCTCAGATTAAAGGTGAACT+TGG | 0.475536 | 6.4:+2345804 | MS.gene47280:CDS |
| TGGTTTGGGTTCCGAACCTA+AGG | 0.475732 | 6.4:+2346820 | MS.gene47280:CDS |
| CCAACTTCAAGTAAACCAAT+TGG | 0.475732 | 6.4:-2347644 | None:intergenic |
| TGGGTTCCGAACCTAAGGTT+CGG | 0.482409 | 6.4:+2346825 | MS.gene47280:CDS |
| GAATCCACCGGCAACTGCAC+CGG | 0.482713 | 6.4:+2346079 | MS.gene47280:CDS |
| AGCTCAGGACTCCGAACCTT+AGG | 0.484228 | 6.4:-2346836 | None:intergenic |
| TGAAGGTAAAGATTGGGATC+AGG | 0.487382 | 6.4:+2346394 | MS.gene47280:CDS |
| GGATTCACCACCTCCGGCGC+CGG | 0.488583 | 6.4:-2346098 | None:intergenic |
| CCCATTCTCCTCGCACCACC+TGG | 0.489919 | 6.4:-2347986 | None:intergenic |
| AAAAGCACAAACCCTTTAAA+CGG | 0.491505 | 6.4:-2348748 | None:intergenic |
| TCCGACGTGGAATGAAGATC+TGG | 0.495816 | 6.4:+2346928 | MS.gene47280:CDS |
| TCACCGGCTGAATCGGTAAC+CGG | 0.496144 | 6.4:-2345963 | None:intergenic |
| CTCAAAACGTCTTGTTGACC+CGG | 0.496992 | 6.4:-2348115 | None:intergenic |
| GCCAGGTGGTGCGAGGAGAA+TGG | 0.497164 | 6.4:+2347985 | MS.gene47280:CDS |
| GATTTACAGCTGGGTTTGGG+TGG | 0.500175 | 6.4:+2346800 | MS.gene47280:CDS |
| CCAGGTGGTGCGAGGAGAAT+GGG | 0.500720 | 6.4:+2347986 | MS.gene47280:CDS |
| GGCGAAATATGGTCCAAAAT+GGG | 0.500863 | 6.4:+2347742 | MS.gene47280:CDS |
| TGAAAGTGAAGGTAAAGATT+GGG | 0.501945 | 6.4:+2346388 | MS.gene47280:CDS |
| CTTTATGTTAAGGCTCAGCT+TGG | 0.503072 | 6.4:+2346857 | MS.gene47280:CDS |
| CGACGGAAGTAGTTTCTGTA+AGG | 0.503747 | 6.4:+2345442 | MS.gene47280:CDS |
| AAGAGATTTGAATCCTCAAT+GGG | 0.506511 | 6.4:+2345584 | MS.gene47280:CDS |
| GTCCAAAATGGGTTCGAACT+AGG | 0.506579 | 6.4:+2347753 | MS.gene47280:CDS |
| CAGTTAACGAAGCCTCCAAT+TGG | 0.508014 | 6.4:+2347629 | MS.gene47280:CDS |
| CTGAGGCATCCGAGGTTTCG+CGG | 0.508921 | 6.4:+2348787 | MS.gene47280:CDS |
| AGCAGAGAAAACTCCGGCAC+CGG | 0.509315 | 6.4:+2346043 | MS.gene47280:CDS |
| ACCGGCAACTGCACCGGCGC+CGG | 0.511022 | 6.4:+2346085 | MS.gene47280:CDS |
| ATGACTAGAAACGGTTCAAA+CGG | 0.513831 | 6.4:-2346968 | None:intergenic |
| TATGTTAAACCATTCGGTCC+GGG | 0.515413 | 6.4:+2348097 | MS.gene47280:CDS |
| CAAACCCAGGATTTACAGCT+GGG | 0.518498 | 6.4:+2346791 | MS.gene47280:CDS |
| AAATCCACCGGCGAATCCAC+CGG | 0.518908 | 6.4:+2346067 | MS.gene47280:CDS |
| TCTAATGTAATGACTAGAAA+CGG | 0.519759 | 6.4:-2346977 | None:intergenic |
| GAGGAAAATCTTTCTTACAC+AGG | 0.520301 | 6.4:+2347115 | MS.gene47280:CDS |
| CTTGAATCGGAAAATTCACC+GGG | 0.520754 | 6.4:+2346617 | MS.gene47280:CDS |
| TCTTGTTGACCCGGACCGAA+TGG | 0.521610 | 6.4:-2348106 | None:intergenic |
| GCAGTTGCCGGTGGATTCGC+CGG | 0.523067 | 6.4:-2346074 | None:intergenic |
| AATCTCAGATACCACAGCTT+CGG | 0.527472 | 6.4:-2346758 | None:intergenic |
| ACCGGTGGATTCACCACCTC+CGG | 0.529411 | 6.4:-2346104 | None:intergenic |
| GGATTCCGGTGGTTTGATAC+CGG | 0.531419 | 6.4:+2346709 | MS.gene47280:CDS |
| GTTATGATTGCAGTATGGAT+TGG | 0.533211 | 6.4:+2346647 | MS.gene47280:CDS |
| GTTCTGTTTGGTAATGTCGT+TGG | 0.534929 | 6.4:+2348711 | MS.gene47280:CDS |
| TCCACCGGTAGCTGAAACGA+AGG | 0.535373 | 6.4:+2346118 | MS.gene47280:CDS |
| TCTCAGAGGTCATTGACTCT+TGG | 0.535745 | 6.4:-2345635 | None:intergenic |
| ATTGGCGATGTTGCAGCTCA+GGG | 0.536874 | 6.4:+2348628 | MS.gene47280:CDS |
| TGATTCTGATTCTAACCAAA+CGG | 0.537770 | 6.4:-2346465 | None:intergenic |
| ACTTCAAGTAAACCAATTGG+AGG | 0.542639 | 6.4:-2347641 | None:intergenic |
| ACCGGCTTTGGGTTCAGAAG+TGG | 0.542962 | 6.4:+2348183 | MS.gene47280:CDS |
| TGGTTCGAATCAGGTACGAT+AGG | 0.544765 | 6.4:+2348572 | MS.gene47280:CDS |
| TGAGCCTTAACATAAAGCTC+AGG | 0.546895 | 6.4:-2346851 | None:intergenic |
| GGGTGCGTGCTCTTGCGGGG+AGG | 0.546936 | 6.4:+2348593 | MS.gene47280:CDS |
| GGCAACTGCACCGGCGCCGG+AGG | 0.548202 | 6.4:+2346088 | MS.gene47280:CDS |
| AACTTGATGAAGAGTTTGAT+GGG | 0.549538 | 6.4:+2348524 | MS.gene47280:CDS |
| TAGTAACGGCTCGTTTAGCT+CGG | 0.551888 | 6.4:+2348155 | MS.gene47280:CDS |
| ATTCGTGCTTGTTTAGAAGG+TGG | 0.552112 | 6.4:+2347548 | MS.gene47280:CDS |
| TTAACTGCTTCGCAGAAGCA+CGG | 0.552505 | 6.4:-2347613 | None:intergenic |
| GGCATGTCACCGCGAAACCT+CGG | 0.552514 | 6.4:-2348796 | None:intergenic |
| TCCTCTCGATCGAAGCCACA+TGG | 0.553051 | 6.4:-2347039 | None:intergenic |
| ACCACTTCTGAACCCAAAGC+CGG | 0.553210 | 6.4:-2348184 | None:intergenic |
| GTTTAATCTTTGTGGTTCAG+AGG | 0.554034 | 6.4:+2347096 | MS.gene47280:CDS |
| AGGACTCCGAACCTTAGGTT+CGG | 0.555214 | 6.4:-2346831 | None:intergenic |
| TGGAACAACTGATGCTTATG+TGG | 0.556975 | 6.4:+2347718 | MS.gene47280:CDS |
| TCGAGTTTCTCGTCCCATTG+AGG | 0.558223 | 6.4:-2345597 | None:intergenic |
| AGAAGAAAATACAAAAGAGG+AGG | 0.559072 | 6.4:+2345998 | MS.gene47280:CDS |
| CGGATTGGTTTAGTCAACTC+GGG | 0.559219 | 6.4:+2346902 | MS.gene47280:CDS |
| TCGGATTGGTTTAGTCAACT+CGG | 0.561294 | 6.4:+2346901 | MS.gene47280:CDS |
| CGACTCCTGAAAAGCTTCAT+CGG | 0.561784 | 6.4:-2346678 | None:intergenic |
| GAACTAGGACTATTGTAGAC+CGG | 0.568885 | 6.4:+2347768 | MS.gene47280:CDS |
| GCAATGGTATACGCTTGAAT+CGG | 0.574115 | 6.4:+2346604 | MS.gene47280:CDS |
| AATGAGGGTGCCAAAGAACA+TGG | 0.574433 | 6.4:+2348462 | MS.gene47280:CDS |
| TTCCGGTGAAAACCAAAGAC+GGG | 0.574843 | 6.4:+2347690 | MS.gene47280:CDS |
| GCTGTGGTATCTGAGATTAA+CGG | 0.575786 | 6.4:+2346763 | MS.gene47280:CDS |
| TAGACCGGTTTAACCCGAGA+TGG | 0.580601 | 6.4:+2347783 | MS.gene47280:CDS |
| GTGGGTGAATCCGGCAACAA+CGG | 0.581645 | 6.4:+2348333 | MS.gene47280:CDS |
| TTTATTATCTGAGGCATCCG+AGG | 0.583279 | 6.4:+2348779 | MS.gene47280:CDS |
| GGACGGATGTGAAGTCGAGA+TGG | 0.583605 | 6.4:+2347074 | MS.gene47280:CDS |
| TTTATCTTTCTCCGAAGCTG+TGG | 0.583621 | 6.4:+2346747 | MS.gene47280:CDS |
| GGTTAGATGGAATTCGCACG+TGG | 0.584819 | 6.4:+2348314 | MS.gene47280:CDS |
| GGTTCGAATCAGGTACGATA+GGG | 0.586450 | 6.4:+2348573 | MS.gene47280:CDS |
| GCTTGAATCGGAAAATTCAC+CGG | 0.587335 | 6.4:+2346616 | MS.gene47280:CDS |
| GAGGATGTCCTACGTGGACA+TGG | 0.588871 | 6.4:+2348489 | MS.gene47280:CDS |
| TACGCGATCGTTGATTTCGA+CGG | 0.589131 | 6.4:+2345534 | MS.gene47280:CDS |
| CTTCCGGTGAAAACCAAAGA+CGG | 0.591203 | 6.4:+2347689 | MS.gene47280:CDS |
| AACAGAGATTTCACTCGGAA+CGG | 0.593560 | 6.4:+2346523 | MS.gene47280:CDS |
| GAGGTTTAGGAACAGAATGA+GGG | 0.595506 | 6.4:+2348447 | MS.gene47280:CDS |
| ATAGGGTGCGTGCTCTTGCG+GGG | 0.595621 | 6.4:+2348590 | MS.gene47280:CDS |
| TCCGGCACCGGAAAATCCAC+CGG | 0.596866 | 6.4:+2346055 | MS.gene47280:CDS |
| TTGATGGGTTTCCAACAATG+AGG | 0.598771 | 6.4:+2348539 | MS.gene47280:CDS |
| TCGAGAGGAGATTAGATGAT+CGG | 0.599775 | 6.4:+2347053 | MS.gene47280:CDS |
| GGCGCCGGTGCAGTTGCCGG+TGG | 0.600320 | 6.4:-2346083 | None:intergenic |
| AAGAAGTTCACGAAAACAGA+TGG | 0.600678 | 6.4:-2348817 | None:intergenic |
| CAAACCCAGCTGTAAATCCT+GGG | 0.602265 | 6.4:-2346795 | None:intergenic |
| TCCATGTGGCTTCGATCGAG+AGG | 0.602643 | 6.4:+2347038 | MS.gene47280:CDS |
| GGATGTTTATGATCCTTGCA+CGG | 0.603723 | 6.4:+2347823 | MS.gene47280:CDS |
| GCGAACATCGCTGTAGCACG+TGG | 0.604446 | 6.4:-2348685 | None:intergenic |
| GTTGCCGGTGGATTCGCCGG+TGG | 0.605637 | 6.4:-2346071 | None:intergenic |
| TCGTGGCAGTCGGATTCCGG+TGG | 0.606208 | 6.4:+2346698 | MS.gene47280:CDS |
| TGGTTTGAAAATTTCTTACG+TGG | 0.608351 | 6.4:+2345824 | MS.gene47280:CDS |
| CCACCGGTTACCGATTCAGC+CGG | 0.608774 | 6.4:+2345960 | MS.gene47280:CDS |
| CAAATAACAGAGATTTCACT+CGG | 0.613819 | 6.4:+2346518 | MS.gene47280:CDS |
| CCAATTGTGAGAACCGTGCA+AGG | 0.616508 | 6.4:-2347836 | None:intergenic |
| GCCGGAGGTGGTGAATCCAC+CGG | 0.617633 | 6.4:+2346103 | MS.gene47280:CDS |
| TCCTTCGTTTCAGCTACCGG+TGG | 0.618506 | 6.4:-2346119 | None:intergenic |
| TGTCTCCGGTATCAAACCAC+CGG | 0.619470 | 6.4:-2346714 | None:intergenic |
| ATGTCCACGTAGGACATCCT+CGG | 0.620138 | 6.4:-2348487 | None:intergenic |
| AGTTCCGAAGAGAGTTCCAC+CGG | 0.620502 | 6.4:+2346565 | MS.gene47280:CDS |
| GAAAGTTGAAGAGAAGTCAC+CGG | 0.622851 | 6.4:+2345896 | MS.gene47280:CDS |
| AGGTCATTGACTCTTGGTCA+AGG | 0.623725 | 6.4:-2345629 | None:intergenic |
| ATACTCATGTGTGGAGCATG+AGG | 0.623826 | 6.4:+2348227 | MS.gene47280:CDS |
| GCAATCATAACGTCATTCCC+CGG | 0.627372 | 6.4:-2346635 | None:intergenic |
| GTTGACTAAACCAATCCGAC+CGG | 0.631922 | 6.4:-2346897 | None:intergenic |
| GAGGAGATTAGATGATCGGA+CGG | 0.634983 | 6.4:+2347057 | MS.gene47280:CDS |
| ATGCTAGAGATGTTAGAATG+GGG | 0.636316 | 6.4:+2347888 | MS.gene47280:CDS |
| ATAGTCCATTAGCACCGCAA+TGG | 0.637924 | 6.4:+2346588 | MS.gene47280:CDS |
| AGAACAAAGAGTGAAAGTGA+AGG | 0.638791 | 6.4:+2346377 | MS.gene47280:CDS |
| AAAACCAAAGACGGGACACG+TGG | 0.639862 | 6.4:+2347698 | MS.gene47280:CDS |
| GGAAGCACGTTTGTGAAAAG+CGG | 0.639955 | 6.4:+2345735 | MS.gene47280:CDS |
| TGCCAAAGAACATGGATCCG+AGG | 0.642801 | 6.4:+2348470 | MS.gene47280:CDS |
| ATTGATCTCCATCGTCTCAG+AGG | 0.644785 | 6.4:-2345649 | None:intergenic |
| CCGGCTGAATCGGTAACCGG+TGG | 0.645500 | 6.4:-2345960 | None:intergenic |
| AAGAATCTAATGCCAAAAGA+CGG | 0.650000 | 6.4:+2345492 | MS.gene47280:CDS |
| AACTGCTATGAAGATAGTAA+CGG | 0.650640 | 6.4:+2348141 | MS.gene47280:CDS |
| GTTTCCAACAATGAGGTCTG+TGG | 0.653670 | 6.4:+2348546 | MS.gene47280:CDS |
| TCACCGGTAACCGAATCAGC+CGG | 0.654339 | 6.4:+2345912 | MS.gene47280:CDS |
| TAGAGATCGAAGCAGAAGTG+CGG | 0.658980 | 6.4:+2346232 | MS.gene47280:CDS |
| AACTCCAGCAGAGAAAACTC+CGG | 0.662938 | 6.4:+2346037 | MS.gene47280:CDS |
| GAATGGGGAAAATTCGTGTG+CGG | 0.663673 | 6.4:+2347903 | MS.gene47280:CDS |
| ATTAACGGTTATCCAAACCC+AGG | 0.667051 | 6.4:+2346778 | MS.gene47280:CDS |
| CAATTCATCAATGACTACGA+CGG | 0.677450 | 6.4:+2345425 | None:intergenic |
| ATAATCTGATCAGAAAACGA+AGG | 0.682260 | 6.4:-2348850 | None:intergenic |
| AATAAGAATTCACGTAGACA+CGG | 0.683583 | 6.4:-2347946 | None:intergenic |
| TATGAAATTGTTCAGAAACG+TGG | 0.688236 | 6.4:+2346167 | MS.gene47280:CDS |
| ACCAGATCTTCATTCCACGT+CGG | 0.689433 | 6.4:-2346929 | None:intergenic |
| GTTAGATGGAATTCGCACGT+GGG | 0.694324 | 6.4:+2348315 | MS.gene47280:CDS |
| CTAATGCCAAAAGACGGTCA+AGG | 0.705237 | 6.4:+2345498 | MS.gene47280:CDS |
| GGTGCTAATGGACTATCCGG+TGG | 0.707887 | 6.4:-2346581 | None:intergenic |
| GATTCAAGCGTATACCATTG+CGG | 0.708958 | 6.4:-2346602 | None:intergenic |
| ATGGAATGAGCAATACACAT+GGG | 0.710143 | 6.4:+2347802 | MS.gene47280:CDS |
| TCAACTCGGGTAATCCGACG+TGG | 0.717880 | 6.4:+2346915 | MS.gene47280:CDS |
| GATGGAATGAGCAATACACA+TGG | 0.725517 | 6.4:+2347801 | MS.gene47280:CDS |
| GGATCCGAGGATGTCCTACG+TGG | 0.726968 | 6.4:+2348483 | MS.gene47280:CDS |
| AACAACTGATGCTTATGTGG+TGG | 0.739510 | 6.4:+2347721 | MS.gene47280:CDS |
| CGAACATCGCTGTAGCACGT+GGG | 0.743703 | 6.4:-2348684 | None:intergenic |
| CAAACTTACCATGTCCACGT+AGG | 0.751076 | 6.4:-2348497 | None:intergenic |
| TTGATTCGGATACTCATGTG+TGG | 0.755979 | 6.4:+2348218 | MS.gene47280:CDS |
| TGGGAAAACGAAGATCCATG+TGG | 0.766661 | 6.4:+2347024 | MS.gene47280:CDS |
| TTGAATCGGAAAATTCACCG+GGG | 0.804497 | 6.4:+2346618 | MS.gene47280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAATACTATCAATT+AGG | + | chr6.4:2347277-2347296 | MS.gene47280:intron | 15.0% |
| !!! | CAAATATATTGCATATTTTA+CGG | + | chr6.4:2347156-2347175 | MS.gene47280:intron | 15.0% |
| !!! | TAATTGATAGTATTTTTTGA+AGG | - | chr6.4:2347278-2347297 | None:intergenic | 15.0% |
| !! | AAAAGAAGAAAATACAAAAG+AGG | + | chr6.4:2345995-2346014 | MS.gene47280:CDS | 20.0% |
| !! | CGTAAAATATGCAATATATT+TGG | - | chr6.4:2347158-2347177 | None:intergenic | 20.0% |
| ! | AAAGCATACATAAAAACTGT+TGG | - | chr6.4:2348412-2348431 | None:intergenic | 25.0% |
| ! | AAATCCAAAATGTCAATTAG+TGG | - | chr6.4:2347505-2347524 | None:intergenic | 25.0% |
| ! | AATCCAAAATGTCAATTAGT+GGG | - | chr6.4:2347504-2347523 | None:intergenic | 25.0% |
| ! | AATGAGCTTATATTTAGAGA+CGG | + | chr6.4:2347344-2347363 | MS.gene47280:intron | 25.0% |
| ! | ACAATGACAAAAAAACAACT+GGG | + | chr6.4:2345676-2345695 | MS.gene47280:CDS | 25.0% |
| ! | ATGCATTATGTTAAACCATT+CGG | + | chr6.4:2348091-2348110 | MS.gene47280:CDS | 25.0% |
| ! | TACAATGACAAAAAAACAAC+TGG | + | chr6.4:2345675-2345694 | MS.gene47280:CDS | 25.0% |
| ! | TCTAATGTAATGACTAGAAA+CGG | - | chr6.4:2346980-2346999 | None:intergenic | 25.0% |
| ! | TTAGGAAAAGTTAAAATCTC+TGG | + | chr6.4:2345714-2345733 | MS.gene47280:CDS | 25.0% |
| ! | TTTCGAATTCAAGATCAATT+GGG | + | chr6.4:2347005-2347024 | MS.gene47280:CDS | 25.0% |
| !! | TTAGATTTTCATGTTCTTCA+TGG | + | chr6.4:2348026-2348045 | MS.gene47280:CDS | 25.0% |
| AACTGCTATGAAGATAGTAA+CGG | + | chr6.4:2348141-2348160 | MS.gene47280:CDS | 30.0% | |
| AACTTGATGAAGAGTTTGAT+GGG | + | chr6.4:2348524-2348543 | MS.gene47280:CDS | 30.0% | |
| AAGAATCTAATGCCAAAAGA+CGG | + | chr6.4:2345492-2345511 | MS.gene47280:CDS | 30.0% | |
| AAGAGATTTGAATCCTCAAT+GGG | + | chr6.4:2345584-2345603 | MS.gene47280:CDS | 30.0% | |
| AATAAGAATTCACGTAGACA+CGG | - | chr6.4:2347949-2347968 | None:intergenic | 30.0% | |
| AGAAGAAAATACAAAAGAGG+AGG | + | chr6.4:2345998-2346017 | MS.gene47280:CDS | 30.0% | |
| ATAATCTGATCAGAAAACGA+AGG | - | chr6.4:2348853-2348872 | None:intergenic | 30.0% | |
| CAAATAACAGAGATTTCACT+CGG | + | chr6.4:2346518-2346537 | MS.gene47280:CDS | 30.0% | |
| GGTTTAACATAATGCATTCT+TGG | - | chr6.4:2348088-2348107 | None:intergenic | 30.0% | |
| GTTTCGAATTCAAGATCAAT+TGG | + | chr6.4:2347004-2347023 | MS.gene47280:CDS | 30.0% | |
| TAATGCATTCTTGGTAGAAT+TGG | - | chr6.4:2348079-2348098 | None:intergenic | 30.0% | |
| TATGAAATTGTTCAGAAACG+TGG | + | chr6.4:2346167-2346186 | MS.gene47280:CDS | 30.0% | |
| TGAAAGTGAAGGTAAAGATT+GGG | + | chr6.4:2346388-2346407 | MS.gene47280:CDS | 30.0% | |
| TGATTCTGATTCTAACCAAA+CGG | - | chr6.4:2346468-2346487 | None:intergenic | 30.0% | |
| TGGTTTGAAAATTTCTTACG+TGG | + | chr6.4:2345824-2345843 | MS.gene47280:CDS | 30.0% | |
| TTATGATTGCAGTATGGATT+GGG | + | chr6.4:2346648-2346667 | MS.gene47280:CDS | 30.0% | |
| TTTACTATCCGTTAGAGAAA+AGG | + | chr6.4:2345772-2345791 | MS.gene47280:CDS | 30.0% | |
| ! | AAAAGCACAAACCCTTTAAA+CGG | - | chr6.4:2348751-2348770 | None:intergenic | 30.0% |
| ! | ACTGTTGGTAGAATCAAATA+AGG | - | chr6.4:2348397-2348416 | None:intergenic | 30.0% |
| ! | CAATTGGTTTACTTGAAGTT+GGG | + | chr6.4:2347645-2347664 | MS.gene47280:CDS | 30.0% |
| ! | CTTTCTTGATTCTGATTTTG+AGG | + | chr6.4:2348428-2348447 | MS.gene47280:CDS | 30.0% |
| !! | ACAATTGGTGTTTTCGATAA+TGG | + | chr6.4:2347851-2347870 | MS.gene47280:CDS | 30.0% |
| !! | ACTGTGTTTTATTGGTTAGA+TGG | + | chr6.4:2348301-2348320 | MS.gene47280:CDS | 30.0% |
| !! | GTTTTCGCTTTTGATAAAGA+AGG | + | chr6.4:2346416-2346435 | MS.gene47280:CDS | 30.0% |
| !!! | TGATTCTGATTTTGAGGTTT+AGG | + | chr6.4:2348434-2348453 | MS.gene47280:CDS | 30.0% |
| !!! | TTCTTTTTTCTTCTCATCAC+CGG | - | chr6.4:2345982-2346001 | None:intergenic | 30.0% |
| AAGAAGTTCACGAAAACAGA+TGG | - | chr6.4:2348820-2348839 | None:intergenic | 35.0% | |
| ACAACGCGAACATATAGAAA+TGG | - | chr6.4:2346281-2346300 | None:intergenic | 35.0% | |
| ACTTCAAGTAAACCAATTGG+AGG | - | chr6.4:2347644-2347663 | None:intergenic | 35.0% | |
| AGAACAAAGAGTGAAAGTGA+AGG | + | chr6.4:2346377-2346396 | MS.gene47280:CDS | 35.0% | |
| AGATGCTAGAGATGTTAGAA+TGG | + | chr6.4:2347886-2347905 | MS.gene47280:CDS | 35.0% | |
| ATGACGTTATGATTGCAGTA+TGG | + | chr6.4:2346642-2346661 | MS.gene47280:CDS | 35.0% | |
| ATGACTAGAAACGGTTCAAA+CGG | - | chr6.4:2346971-2346990 | None:intergenic | 35.0% | |
| ATGCTAGAGATGTTAGAATG+GGG | + | chr6.4:2347888-2347907 | MS.gene47280:CDS | 35.0% | |
| ATGGAATGAGCAATACACAT+GGG | + | chr6.4:2347802-2347821 | MS.gene47280:CDS | 35.0% | |
| CAAGAGATTTGAATCCTCAA+TGG | + | chr6.4:2345583-2345602 | MS.gene47280:CDS | 35.0% | |
| CATATTCGTGCTTGTTTAGA+AGG | + | chr6.4:2347545-2347564 | MS.gene47280:CDS | 35.0% | |
| CCAACTTCAAGTAAACCAAT+TGG | - | chr6.4:2347647-2347666 | None:intergenic | 35.0% | |
| GAACTTGATGAAGAGTTTGA+TGG | + | chr6.4:2348523-2348542 | MS.gene47280:CDS | 35.0% | |
| GAGGAAAATCTTTCTTACAC+AGG | + | chr6.4:2347115-2347134 | MS.gene47280:CDS | 35.0% | |
| GATGCTAGAGATGTTAGAAT+GGG | + | chr6.4:2347887-2347906 | MS.gene47280:CDS | 35.0% | |
| GTGAAAGTGAAGGTAAAGAT+TGG | + | chr6.4:2346387-2346406 | MS.gene47280:CDS | 35.0% | |
| GTTATGATTGCAGTATGGAT+TGG | + | chr6.4:2346647-2346666 | MS.gene47280:CDS | 35.0% | |
| GTTTAATCTTTGTGGTTCAG+AGG | + | chr6.4:2347096-2347115 | MS.gene47280:CDS | 35.0% | |
| TCGAGATGGTTTAATCTTTG+TGG | + | chr6.4:2347088-2347107 | MS.gene47280:CDS | 35.0% | |
| TCTCAGATTAAAGGTGAACT+TGG | + | chr6.4:2345804-2345823 | MS.gene47280:CDS | 35.0% | |
| TGAGGAAAAGTAAAGCGAAT+TGG | + | chr6.4:2348245-2348264 | MS.gene47280:CDS | 35.0% | |
| TTATGTTAAACCATTCGGTC+CGG | + | chr6.4:2348096-2348115 | MS.gene47280:CDS | 35.0% | |
| TTCATGGTTGAGTTTAATGC+AGG | + | chr6.4:2348042-2348061 | MS.gene47280:CDS | 35.0% | |
| ! | AAAACGCTCCTTTTCTCTAA+CGG | - | chr6.4:2345783-2345802 | None:intergenic | 35.0% |
| ! | AGCGTTTTCTCTCAGATTAA+AGG | + | chr6.4:2345795-2345814 | MS.gene47280:CDS | 35.0% |
| ! | CCAATTGGTTTACTTGAAGT+TGG | + | chr6.4:2347644-2347663 | MS.gene47280:CDS | 35.0% |
| ! | CTCATCTTTCTTTTCATCAC+CGG | - | chr6.4:2345877-2345896 | None:intergenic | 35.0% |
| ! | CTGTTTTCGTGAACTTCTTT+CGG | + | chr6.4:2348821-2348840 | MS.gene47280:CDS | 35.0% |
| ! | CTTCTTTAGAAGTTTCCGTT+TGG | + | chr6.4:2346450-2346469 | MS.gene47280:CDS | 35.0% |
| ! | CTTTTCTCAAAGCTTGTGAT+TGG | + | chr6.4:2346341-2346360 | MS.gene47280:CDS | 35.0% |
| ! | GCGAATTGGTTTAGATTAGT+TGG | + | chr6.4:2348259-2348278 | MS.gene47280:CDS | 35.0% |
| ! | GTTTAAAGGGTTTGTGCTTT+TGG | + | chr6.4:2348750-2348769 | MS.gene47280:CDS | 35.0% |
| !! | GATTGGAAGCTTTGTTTAGT+TGG | + | chr6.4:2348656-2348675 | MS.gene47280:CDS | 35.0% |
| !!! | GGGAAGAGAAGTACTTTTTT+AGG | + | chr6.4:2345696-2345715 | MS.gene47280:CDS | 35.0% |
| !!! | GTCTTTTTTCTCACTATCAC+CGG | - | chr6.4:2345934-2345953 | None:intergenic | 35.0% |
| !!! | TTGGTGTTTTCGATAATGGA+AGG | + | chr6.4:2347855-2347874 | MS.gene47280:CDS | 35.0% |
| AAATGTCAATTAGTGGGAGC+AGG | - | chr6.4:2347498-2347517 | None:intergenic | 40.0% | |
| AACAACTGATGCTTATGTGG+TGG | + | chr6.4:2347721-2347740 | MS.gene47280:CDS | 40.0% | |
| AACAGAGATTTCACTCGGAA+CGG | + | chr6.4:2346523-2346542 | MS.gene47280:CDS | 40.0% | |
| AATCTCAGATACCACAGCTT+CGG | - | chr6.4:2346761-2346780 | None:intergenic | 40.0% | |
| ATTAACGGTTATCCAAACCC+AGG | + | chr6.4:2346778-2346797 | MS.gene47280:CDS | 40.0% | |
| ATTCGTGCTTGTTTAGAAGG+TGG | + | chr6.4:2347548-2347567 | MS.gene47280:CDS | 40.0% | |
| CTTGAATCGGAAAATTCACC+GGG | + | chr6.4:2346617-2346636 | MS.gene47280:CDS | 40.0% | |
| CTTTATGTTAAGGCTCAGCT+TGG | + | chr6.4:2346857-2346876 | MS.gene47280:CDS | 40.0% | |
| GAAAAAAGACGAGAATCCAC+CGG | + | chr6.4:2345944-2345963 | MS.gene47280:CDS | 40.0% | |
| GAAAGTTGAAGAGAAGTCAC+CGG | + | chr6.4:2345896-2345915 | MS.gene47280:CDS | 40.0% | |
| GAACTAGGACTATTGTAGAC+CGG | + | chr6.4:2347768-2347787 | MS.gene47280:CDS | 40.0% | |
| GAGGTTTAGGAACAGAATGA+GGG | + | chr6.4:2348447-2348466 | MS.gene47280:CDS | 40.0% | |
| GATGGAATGAGCAATACACA+TGG | + | chr6.4:2347801-2347820 | MS.gene47280:CDS | 40.0% | |
| GATTCAAGCGTATACCATTG+CGG | - | chr6.4:2346605-2346624 | None:intergenic | 40.0% | |
| GCAATGGTATACGCTTGAAT+CGG | + | chr6.4:2346604-2346623 | MS.gene47280:CDS | 40.0% | |
| GCTTGAATCGGAAAATTCAC+CGG | + | chr6.4:2346616-2346635 | MS.gene47280:CDS | 40.0% | |
| GGATGTTTATGATCCTTGCA+CGG | + | chr6.4:2347823-2347842 | MS.gene47280:CDS | 40.0% | |
| GGCGAAATATGGTCCAAAAT+GGG | + | chr6.4:2347742-2347761 | MS.gene47280:CDS | 40.0% | |
| GGTTCAGTTCATGCTTGATT+CGG | + | chr6.4:2348204-2348223 | MS.gene47280:CDS | 40.0% | |
| GTGTATTGCTCATTCCATCT+CGG | - | chr6.4:2347800-2347819 | None:intergenic | 40.0% | |
| TATGTTAAACCATTCGGTCC+GGG | + | chr6.4:2348097-2348116 | MS.gene47280:CDS | 40.0% | |
| TCGAGAGGAGATTAGATGAT+CGG | + | chr6.4:2347053-2347072 | MS.gene47280:CDS | 40.0% | |
| TGAACTAAAACCGTTGTTGC+CGG | - | chr6.4:2348346-2348365 | None:intergenic | 40.0% | |
| TGAAGGTAAAGATTGGGATC+AGG | + | chr6.4:2346394-2346413 | MS.gene47280:CDS | 40.0% | |
| TGAGCCTTAACATAAAGCTC+AGG | - | chr6.4:2346854-2346873 | None:intergenic | 40.0% | |
| TGAGGTTTAGGAACAGAATG+AGG | + | chr6.4:2348446-2348465 | MS.gene47280:CDS | 40.0% | |
| TGGAACAACTGATGCTTATG+TGG | + | chr6.4:2347718-2347737 | MS.gene47280:CDS | 40.0% | |
| TGGCGAAATATGGTCCAAAA+TGG | + | chr6.4:2347741-2347760 | MS.gene47280:CDS | 40.0% | |
| TGTATTGCTCATTCCATCTC+GGG | - | chr6.4:2347799-2347818 | None:intergenic | 40.0% | |
| TTACTTGAAGTTGGGATTCG+TGG | + | chr6.4:2347653-2347672 | MS.gene47280:CDS | 40.0% | |
| TTGAATCGGAAAATTCACCG+GGG | + | chr6.4:2346618-2346637 | MS.gene47280:CDS | 40.0% | |
| TTTATCTTTCTCCGAAGCTG+TGG | + | chr6.4:2346747-2346766 | MS.gene47280:CDS | 40.0% | |
| ! | GAGTCCTGAGCTTTATGTTA+AGG | + | chr6.4:2346847-2346866 | MS.gene47280:CDS | 40.0% |
| ! | GCTCCCACTAATTGACATTT+TGG | + | chr6.4:2347498-2347517 | MS.gene47280:intron | 40.0% |
| ! | GCTGTGGTATCTGAGATTAA+CGG | + | chr6.4:2346763-2346782 | MS.gene47280:CDS | 40.0% |
| ! | GTTCGACGACTGTGTTTTAT+TGG | + | chr6.4:2348293-2348312 | MS.gene47280:CDS | 40.0% |
| ! | TCTGCTGGAGTTTCTTCTTT+TGG | - | chr6.4:2346029-2346048 | None:intergenic | 40.0% |
| ! | TTTATTATCTGAGGCATCCG+AGG | + | chr6.4:2348779-2348798 | MS.gene47280:CDS | 40.0% |
| ! | TTTTGGATTTGTCTCTGCAC+AGG | + | chr6.4:2347515-2347534 | MS.gene47280:intron | 40.0% |
| !! | CTTTTCATCACCGGTTGAAT+CGG | - | chr6.4:2345868-2345887 | None:intergenic | 40.0% |
| !! | GTTCTGTTTGGTAATGTCGT+TGG | + | chr6.4:2348711-2348730 | MS.gene47280:CDS | 40.0% |
| !! | TCGGATTGGTTTAGTCAACT+CGG | + | chr6.4:2346901-2346920 | MS.gene47280:CDS | 40.0% |
| !! | TCGTTGATTGTTTTACTGCC+AGG | + | chr6.4:2347968-2347987 | MS.gene47280:CDS | 40.0% |
| !! | TCTATGCTGTGCCGTTTAAA+GGG | + | chr6.4:2348737-2348756 | MS.gene47280:CDS | 40.0% |
| !! | TTACCTGTTACCGATTCAAC+CGG | + | chr6.4:2345855-2345874 | MS.gene47280:CDS | 40.0% |
| !! | TTCTATGCTGTGCCGTTTAA+AGG | + | chr6.4:2348736-2348755 | MS.gene47280:CDS | 40.0% |
| !! | TTGATGGGTTTCCAACAATG+AGG | + | chr6.4:2348539-2348558 | MS.gene47280:CDS | 40.0% |
| !! | TTGATTCGGATACTCATGTG+TGG | + | chr6.4:2348218-2348237 | MS.gene47280:CDS | 40.0% |
| !! | TTGATTGTTTTACTGCCAGG+TGG | + | chr6.4:2347971-2347990 | MS.gene47280:CDS | 40.0% |
| !!! | CACAGGTTTTTAAAACCGGT+CGG | + | chr6.4:2346882-2346901 | MS.gene47280:CDS | 40.0% |
| !!! | GGTGCACAGGTTTTTAAAAC+CGG | + | chr6.4:2346878-2346897 | MS.gene47280:CDS | 40.0% |
| !!! | GTTTTTAAAACCGGTCGGAT+TGG | + | chr6.4:2346887-2346906 | MS.gene47280:CDS | 40.0% |
| !!! | TGGCTGGGTTTTATTATCTG+AGG | + | chr6.4:2348770-2348789 | MS.gene47280:CDS | 40.0% |
| AACAATGAGGTCTGTGGAAG+TGG | + | chr6.4:2348552-2348571 | MS.gene47280:CDS | 45.0% | |
| AACTCCAGCAGAGAAAACTC+CGG | + | chr6.4:2346037-2346056 | MS.gene47280:CDS | 45.0% | |
| ACATCCTTCGTTTCAGCTAC+CGG | - | chr6.4:2346125-2346144 | None:intergenic | 45.0% | |
| ACCAGATCTTCATTCCACGT+CGG | - | chr6.4:2346932-2346951 | None:intergenic | 45.0% | |
| ACTTCCACAGACCTCATTGT+TGG | - | chr6.4:2348553-2348572 | None:intergenic | 45.0% | |
| ATACTCATGTGTGGAGCATG+AGG | + | chr6.4:2348227-2348246 | MS.gene47280:CDS | 45.0% | |
| ATAGTCCATTAGCACCGCAA+TGG | + | chr6.4:2346588-2346607 | MS.gene47280:CDS | 45.0% | |
| ATCCTCGGATCCATGTTCTT+TGG | - | chr6.4:2348475-2348494 | None:intergenic | 45.0% | |
| ATTGATCTCCATCGTCTCAG+AGG | - | chr6.4:2345652-2345671 | None:intergenic | 45.0% | |
| CAAACCCAGCTGTAAATCCT+GGG | - | chr6.4:2346798-2346817 | None:intergenic | 45.0% | |
| CAAACCCAGGATTTACAGCT+GGG | + | chr6.4:2346791-2346810 | MS.gene47280:CDS | 45.0% | |
| CAAACTTACCATGTCCACGT+AGG | - | chr6.4:2348500-2348519 | None:intergenic | 45.0% | |
| CAGGATTTACAGCTGGGTTT+GGG | + | chr6.4:2346797-2346816 | MS.gene47280:CDS | 45.0% | |
| CAGTTAACGAAGCCTCCAAT+TGG | + | chr6.4:2347629-2347648 | MS.gene47280:CDS | 45.0% | |
| CATTCCATCTCGGGTTAAAC+CGG | - | chr6.4:2347790-2347809 | None:intergenic | 45.0% | |
| CGACGGAAGTAGTTTCTGTA+AGG | + | chr6.4:2345442-2345461 | MS.gene47280:CDS | 45.0% | |
| CGACTCCTGAAAAGCTTCAT+CGG | - | chr6.4:2346681-2346700 | None:intergenic | 45.0% | |
| CTAATGCCAAAAGACGGTCA+AGG | + | chr6.4:2345498-2345517 | MS.gene47280:CDS | 45.0% | |
| CTACGTGGACATGGTAAGTT+TGG | + | chr6.4:2348498-2348517 | MS.gene47280:CDS | 45.0% | |
| CTTCCGGTGAAAACCAAAGA+CGG | + | chr6.4:2347689-2347708 | MS.gene47280:CDS | 45.0% | |
| GAATGGGGAAAATTCGTGTG+CGG | + | chr6.4:2347903-2347922 | MS.gene47280:CDS | 45.0% | |
| GAGGAGATTAGATGATCGGA+CGG | + | chr6.4:2347057-2347076 | MS.gene47280:CDS | 45.0% | |
| GATGTTCGCTGTGTTCTGTT+TGG | + | chr6.4:2348699-2348718 | MS.gene47280:CDS | 45.0% | |
| GCAATCATAACGTCATTCCC+CGG | - | chr6.4:2346638-2346657 | None:intergenic | 45.0% | |
| GGTTCGAATCAGGTACGATA+GGG | + | chr6.4:2348573-2348592 | MS.gene47280:CDS | 45.0% | |
| GTTAGATGGAATTCGCACGT+GGG | + | chr6.4:2348315-2348334 | MS.gene47280:CDS | 45.0% | |
| GTTGACTAAACCAATCCGAC+CGG | - | chr6.4:2346900-2346919 | None:intergenic | 45.0% | |
| GTTTCCAACAATGAGGTCTG+TGG | + | chr6.4:2348546-2348565 | MS.gene47280:CDS | 45.0% | |
| TAAACTTTCGCTCGTGTCTC+CGG | - | chr6.4:2346731-2346750 | None:intergenic | 45.0% | |
| TAGAGATCGAAGCAGAAGTG+CGG | + | chr6.4:2346232-2346251 | MS.gene47280:CDS | 45.0% | |
| TAGTAACGGCTCGTTTAGCT+CGG | + | chr6.4:2348155-2348174 | MS.gene47280:CDS | 45.0% | |
| TGGAGCAACGAATCTTCTTC+CGG | + | chr6.4:2347673-2347692 | MS.gene47280:CDS | 45.0% | |
| TGGGAAAACGAAGATCCATG+TGG | + | chr6.4:2347024-2347043 | MS.gene47280:CDS | 45.0% | |
| TGGTTCGAATCAGGTACGAT+AGG | + | chr6.4:2348572-2348591 | MS.gene47280:CDS | 45.0% | |
| TTAACTGCTTCGCAGAAGCA+CGG | - | chr6.4:2347616-2347635 | None:intergenic | 45.0% | |
| TTCCGGTGAAAACCAAAGAC+GGG | + | chr6.4:2347690-2347709 | MS.gene47280:CDS | 45.0% | |
| ! | AAAGGGTTTGTGCTTTTGGC+TGG | + | chr6.4:2348754-2348773 | MS.gene47280:CDS | 45.0% |
| ! | CTCAAAACGTCTTGTTGACC+CGG | - | chr6.4:2348118-2348137 | None:intergenic | 45.0% |
| ! | GCTTATGTGGTGGCGAAATA+TGG | + | chr6.4:2347731-2347750 | MS.gene47280:CDS | 45.0% |
| ! | GGAAGCACGTTTGTGAAAAG+CGG | + | chr6.4:2345735-2345754 | MS.gene47280:CDS | 45.0% |
| ! | GTATACCATTGCGGTGCTAA+TGG | - | chr6.4:2346596-2346615 | None:intergenic | 45.0% |
| ! | GTCCAAAATGGGTTCGAACT+AGG | + | chr6.4:2347753-2347772 | MS.gene47280:CDS | 45.0% |
| ! | GTCCTAGTTCGAACCCATTT+TGG | - | chr6.4:2347758-2347777 | None:intergenic | 45.0% |
| !! | AAGGGTTTGTGCTTTTGGCT+GGG | + | chr6.4:2348755-2348774 | MS.gene47280:CDS | 45.0% |
| !! | AATGAGGGTGCCAAAGAACA+TGG | + | chr6.4:2348462-2348481 | MS.gene47280:CDS | 45.0% |
| !! | AGGTCATTGACTCTTGGTCA+AGG | - | chr6.4:2345632-2345651 | None:intergenic | 45.0% |
| !! | ATGAAGCTTTTCAGGAGTCG+TGG | + | chr6.4:2346681-2346700 | MS.gene47280:CDS | 45.0% |
| !! | CGGATTGGTTTAGTCAACTC+GGG | + | chr6.4:2346902-2346921 | MS.gene47280:CDS | 45.0% |
| !! | TACGCGATCGTTGATTTCGA+CGG | + | chr6.4:2345534-2345553 | MS.gene47280:CDS | 45.0% |
| !! | TCTCAGAGGTCATTGACTCT+TGG | - | chr6.4:2345638-2345657 | None:intergenic | 45.0% |
| AAAACCAAAGACGGGACACG+TGG | + | chr6.4:2347698-2347717 | MS.gene47280:CDS | 50.0% | |
| AATTCGCACGTGGGTGAATC+CGG | + | chr6.4:2348324-2348343 | MS.gene47280:CDS | 50.0% | |
| ACCACTTCTGAACCCAAAGC+CGG | - | chr6.4:2348187-2348206 | None:intergenic | 50.0% | |
| AGGACTCCGAACCTTAGGTT+CGG | - | chr6.4:2346834-2346853 | None:intergenic | 50.0% | |
| AGTTCCGAAGAGAGTTCCAC+CGG | + | chr6.4:2346565-2346584 | MS.gene47280:CDS | 50.0% | |
| ATGTCCACGTAGGACATCCT+CGG | - | chr6.4:2348490-2348509 | None:intergenic | 50.0% | |
| ATTGGCGATGTTGCAGCTCA+GGG | + | chr6.4:2348628-2348647 | MS.gene47280:CDS | 50.0% | |
| CCAAACCCAGCTGTAAATCC+TGG | - | chr6.4:2346799-2346818 | None:intergenic | 50.0% | |
| CCAAACCCAGGATTTACAGC+TGG | + | chr6.4:2346790-2346809 | MS.gene47280:CDS | 50.0% | |
| CCAATTGTGAGAACCGTGCA+AGG | - | chr6.4:2347839-2347858 | None:intergenic | 50.0% | |
| CCAGCTGTAAATCCTGGGTT+TGG | - | chr6.4:2346793-2346812 | None:intergenic | 50.0% | |
| CCAGGATTTACAGCTGGGTT+TGG | + | chr6.4:2346796-2346815 | MS.gene47280:CDS | 50.0% | |
| CCTTGCACGGTTCTCACAAT+TGG | + | chr6.4:2347836-2347855 | MS.gene47280:CDS | 50.0% | |
| CTATCCGGTGGAACTCTCTT+CGG | - | chr6.4:2346572-2346591 | None:intergenic | 50.0% | |
| CTGTGGAAGTGGTTCGAATC+AGG | + | chr6.4:2348563-2348582 | MS.gene47280:CDS | 50.0% | |
| GATTTACAGCTGGGTTTGGG+TGG | + | chr6.4:2346800-2346819 | MS.gene47280:CDS | 50.0% | |
| GGATTCCGGTGGTTTGATAC+CGG | + | chr6.4:2346709-2346728 | MS.gene47280:CDS | 50.0% | |
| GGATTTGTCTCTGCACAGGT+AGG | + | chr6.4:2347519-2347538 | MS.gene47280:intron | 50.0% | |
| GGTTAGATGGAATTCGCACG+TGG | + | chr6.4:2348314-2348333 | MS.gene47280:CDS | 50.0% | |
| TCCGACGTGGAATGAAGATC+TGG | + | chr6.4:2346928-2346947 | MS.gene47280:CDS | 50.0% | |
| TCGAGTTTCTCGTCCCATTG+AGG | - | chr6.4:2345600-2345619 | None:intergenic | 50.0% | |
| TGCCAAAGAACATGGATCCG+AGG | + | chr6.4:2348470-2348489 | MS.gene47280:CDS | 50.0% | |
| TGGGTTCCGAACCTAAGGTT+CGG | + | chr6.4:2346825-2346844 | MS.gene47280:CDS | 50.0% | |
| TGTCTCCGGTATCAAACCAC+CGG | - | chr6.4:2346717-2346736 | None:intergenic | 50.0% | |
| ! | CTCACTATCACCGGCTGATT+CGG | - | chr6.4:2345925-2345944 | None:intergenic | 50.0% |
| ! | CTTCTCATCACCGGCTGAAT+CGG | - | chr6.4:2345973-2345992 | None:intergenic | 50.0% |
| ! | GCAAGCCGATGAAGCTTTTC+AGG | + | chr6.4:2346673-2346692 | MS.gene47280:CDS | 50.0% |
| ! | GCTGTTCCTTGACCGTCTTT+TGG | - | chr6.4:2345507-2345526 | None:intergenic | 50.0% |
| ! | GGGAGGGCACAAAGTTTGAT+TGG | + | chr6.4:2348610-2348629 | MS.gene47280:CDS | 50.0% |
| ! | TAGACCGGTTTAACCCGAGA+TGG | + | chr6.4:2347783-2347802 | MS.gene47280:CDS | 50.0% |
| ! | TCACCGGTTGAATCGGTAAC+AGG | - | chr6.4:2345861-2345880 | None:intergenic | 50.0% |
| ! | TCGTTTAGCTCGGTCTGAAC+CGG | + | chr6.4:2348165-2348184 | MS.gene47280:CDS | 50.0% |
| ! | TGGTTTGGGTTCCGAACCTA+AGG | + | chr6.4:2346820-2346839 | MS.gene47280:CDS | 50.0% |
| !! | GTCAATGACCTCTGAGACGA+TGG | + | chr6.4:2345641-2345660 | MS.gene47280:CDS | 50.0% |
| !! | TGCGGTGCTAATGGACTATC+CGG | - | chr6.4:2346587-2346606 | None:intergenic | 50.0% |
| !! | TTTTCAGGAGTCGTGGCAGT+CGG | + | chr6.4:2346688-2346707 | MS.gene47280:CDS | 50.0% |
| !!! | GTCCCGTCTTTGGTTTTCAC+CGG | - | chr6.4:2347695-2347714 | None:intergenic | 50.0% |
| AAATCCACCGGCGAATCCAC+CGG | + | chr6.4:2346067-2346086 | MS.gene47280:CDS | 55.0% | |
| ACAGCTGGGTTTGGGTGGTT+TGG | + | chr6.4:2346805-2346824 | MS.gene47280:CDS | 55.0% | |
| AGCAGAGAAAACTCCGGCAC+CGG | + | chr6.4:2346043-2346062 | MS.gene47280:CDS | 55.0% | |
| AGCTCAGGACTCCGAACCTT+AGG | - | chr6.4:2346839-2346858 | None:intergenic | 55.0% | |
| CAGCTGGGTTTGGGTGGTTT+GGG | + | chr6.4:2346806-2346825 | MS.gene47280:CDS | 55.0% | |
| CGAACATCGCTGTAGCACGT+GGG | - | chr6.4:2348687-2348706 | None:intergenic | 55.0% | |
| GAGGATGTCCTACGTGGACA+TGG | + | chr6.4:2348489-2348508 | MS.gene47280:CDS | 55.0% | |
| GATTGGCGATGTTGCAGCTC+AGG | + | chr6.4:2348627-2348646 | MS.gene47280:CDS | 55.0% | |
| GGACGGATGTGAAGTCGAGA+TGG | + | chr6.4:2347074-2347093 | MS.gene47280:CDS | 55.0% | |
| GTGGGTGAATCCGGCAACAA+CGG | + | chr6.4:2348333-2348352 | MS.gene47280:CDS | 55.0% | |
| TCAACTCGGGTAATCCGACG+TGG | + | chr6.4:2346915-2346934 | MS.gene47280:CDS | 55.0% | |
| TCACCGGTAACCGAATCAGC+CGG | + | chr6.4:2345912-2345931 | MS.gene47280:CDS | 55.0% | |
| TCCACCGGTAGCTGAAACGA+AGG | + | chr6.4:2346118-2346137 | MS.gene47280:CDS | 55.0% | |
| TCCATGTGGCTTCGATCGAG+AGG | + | chr6.4:2347038-2347057 | MS.gene47280:CDS | 55.0% | |
| TCCTCTCGATCGAAGCCACA+TGG | - | chr6.4:2347042-2347061 | None:intergenic | 55.0% | |
| TCCTTCGTTTCAGCTACCGG+TGG | - | chr6.4:2346122-2346141 | None:intergenic | 55.0% | |
| TCTTGTTGACCCGGACCGAA+TGG | - | chr6.4:2348109-2348128 | None:intergenic | 55.0% | |
| TGTTCCACGTGTCCCGTCTT+TGG | - | chr6.4:2347705-2347724 | None:intergenic | 55.0% | |
| ! | TCACCGGCTGAATCGGTAAC+CGG | - | chr6.4:2345966-2345985 | None:intergenic | 55.0% |
| ! | TTTTACTGCCAGGTGGTGCG+AGG | + | chr6.4:2347978-2347997 | MS.gene47280:CDS | 55.0% |
| !! | ACCGGCTTTGGGTTCAGAAG+TGG | + | chr6.4:2348183-2348202 | MS.gene47280:CDS | 55.0% |
| !! | GGATTCGCCGGTGGATTTTC+CGG | - | chr6.4:2346065-2346084 | None:intergenic | 55.0% |
| !! | GGTGCTAATGGACTATCCGG+TGG | - | chr6.4:2346584-2346603 | None:intergenic | 55.0% |
| !! | TAAGGCTCAGCTTGGTGCAC+AGG | + | chr6.4:2346865-2346884 | MS.gene47280:CDS | 55.0% |
| !! | TCACCGGCTGATTCGGTTAC+CGG | - | chr6.4:2345918-2345937 | None:intergenic | 55.0% |
| ATAGGGTGCGTGCTCTTGCG+GGG | + | chr6.4:2348590-2348609 | MS.gene47280:CDS | 60.0% | |
| CCAGGTGGTGCGAGGAGAAT+GGG | + | chr6.4:2347986-2348005 | MS.gene47280:CDS | 60.0% | |
| CGATAGGGTGCGTGCTCTTG+CGG | + | chr6.4:2348588-2348607 | MS.gene47280:CDS | 60.0% | |
| GAATCCACCGGCAACTGCAC+CGG | + | chr6.4:2346079-2346098 | MS.gene47280:CDS | 60.0% | |
| GAGTCGTGGCAGTCGGATTC+CGG | + | chr6.4:2346695-2346714 | MS.gene47280:CDS | 60.0% | |
| GATAGGGTGCGTGCTCTTGC+GGG | + | chr6.4:2348589-2348608 | MS.gene47280:CDS | 60.0% | |
| GCGAACATCGCTGTAGCACG+TGG | - | chr6.4:2348688-2348707 | None:intergenic | 60.0% | |
| GGATCCGAGGATGTCCTACG+TGG | + | chr6.4:2348483-2348502 | MS.gene47280:CDS | 60.0% | |
| GGCATGTCACCGCGAAACCT+CGG | - | chr6.4:2348799-2348818 | None:intergenic | 60.0% | |
| TGCAGCTCAGGGCGAGAGAT+TGG | + | chr6.4:2348639-2348658 | MS.gene47280:CDS | 60.0% | |
| ! | ACCGGTGGATTCACCACCTC+CGG | - | chr6.4:2346107-2346126 | None:intergenic | 60.0% |
| ! | AGCTCGGTCTGAACCGGCTT+TGG | + | chr6.4:2348171-2348190 | MS.gene47280:CDS | 60.0% |
| ! | CTGAGGCATCCGAGGTTTCG+CGG | + | chr6.4:2348787-2348806 | MS.gene47280:CDS | 60.0% |
| ! | GCTCGGTCTGAACCGGCTTT+GGG | + | chr6.4:2348172-2348191 | MS.gene47280:CDS | 60.0% |
| ! | TCCGGCACCGGAAAATCCAC+CGG | + | chr6.4:2346055-2346074 | MS.gene47280:CDS | 60.0% |
| !! | CCACCGGTTACCGATTCAGC+CGG | + | chr6.4:2345960-2345979 | MS.gene47280:CDS | 60.0% |
| !! | GGTGCCGGAGTTTTCTCTGC+TGG | - | chr6.4:2346044-2346063 | None:intergenic | 60.0% |
| CCCATTCTCCTCGCACCACC+TGG | - | chr6.4:2347989-2348008 | None:intergenic | 65.0% | |
| CCGGCTGAATCGGTAACCGG+TGG | - | chr6.4:2345963-2345982 | None:intergenic | 65.0% | |
| GCCAGGTGGTGCGAGGAGAA+TGG | + | chr6.4:2347985-2348004 | MS.gene47280:CDS | 65.0% | |
| GCCGGAGGTGGTGAATCCAC+CGG | + | chr6.4:2346103-2346122 | MS.gene47280:CDS | 65.0% | |
| TCGTGGCAGTCGGATTCCGG+TGG | + | chr6.4:2346698-2346717 | MS.gene47280:CDS | 65.0% | |
| ! | GCAGTTGCCGGTGGATTCGC+CGG | - | chr6.4:2346077-2346096 | None:intergenic | 65.0% |
| !! | GCCGGTGGATTTTCCGGTGC+CGG | - | chr6.4:2346059-2346078 | None:intergenic | 65.0% |
| GGATTCACCACCTCCGGCGC+CGG | - | chr6.4:2346101-2346120 | None:intergenic | 70.0% | |
| GGTGCGTGCTCTTGCGGGGA+GGG | + | chr6.4:2348594-2348613 | MS.gene47280:CDS | 70.0% | |
| ! | GTTGCCGGTGGATTCGCCGG+TGG | - | chr6.4:2346074-2346093 | None:intergenic | 70.0% |
| GGGTGCGTGCTCTTGCGGGG+AGG | + | chr6.4:2348593-2348612 | MS.gene47280:CDS | 75.0% | |
| ! | AACTGCACCGGCGCCGGAGG+TGG | + | chr6.4:2346091-2346110 | MS.gene47280:CDS | 75.0% |
| ! | ACCGGCAACTGCACCGGCGC+CGG | + | chr6.4:2346085-2346104 | MS.gene47280:CDS | 75.0% |
| !! | TCCGGCGCCGGTGCAGTTGC+CGG | - | chr6.4:2346089-2346108 | None:intergenic | 75.0% |
| !! | GGCAACTGCACCGGCGCCGG+AGG | + | chr6.4:2346088-2346107 | MS.gene47280:CDS | 80.0% |
| !!! | GGCGCCGGTGCAGTTGCCGG+TGG | - | chr6.4:2346086-2346105 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 2345435 | 2348876 | 2345435 | ID=MS.gene47280 |
| chr6.4 | mRNA | 2345435 | 2348876 | 2345435 | ID=MS.gene47280.t1;Parent=MS.gene47280 |
| chr6.4 | exon | 2345435 | 2347136 | 2345435 | ID=MS.gene47280.t1.exon1;Parent=MS.gene47280.t1 |
| chr6.4 | CDS | 2345435 | 2347136 | 2345435 | ID=cds.MS.gene47280.t1;Parent=MS.gene47280.t1 |
| chr6.4 | exon | 2347537 | 2348876 | 2347537 | ID=MS.gene47280.t1.exon2;Parent=MS.gene47280.t1 |
| chr6.4 | CDS | 2347537 | 2348876 | 2347537 | ID=cds.MS.gene47280.t1;Parent=MS.gene47280.t1 |
| Gene Sequence |
| Protein sequence |
