Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47566.t1 | RHN59492.1 | 90.3 | 134 | 13 | 0 | 75 | 208 | 1 | 134 | 6.60E-55 | 224.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47566.t1 | A9GT78 | 58.0 | 100 | 42 | 0 | 111 | 210 | 6 | 105 | 1.5e-23 | 112.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47566.t1 | G7JLY2 | 90.3 | 134 | 13 | 0 | 75 | 208 | 1 | 134 | 4.7e-55 | 224.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene47566 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene47566 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene049669 | MS.gene47566 | 0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene47566 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene47566 | 0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene47566 | 0.805772 | 1.14E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene47566 | 0.819615 | 1.06E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene47566 | 0.817333 | 3.48E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene47566 | 0.811072 | 8.40E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene47566 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene47566 | 0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene47566 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene47566 | 0.833853 | 4.20E-56 | -1.69E-46 |
| MS.gene056050 | MS.gene47566 | 0.826947 | 2.05E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene47566 | 0.826828 | 2.19E-54 | -1.69E-46 |
| MS.gene056366 | MS.gene47566 | 0.820959 | 5.21E-53 | -1.69E-46 |
| MS.gene056595 | MS.gene47566 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene47566 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene47566 | 0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene47566 | 0.811817 | 5.79E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene47566 | 0.814043 | 1.88E-51 | -1.69E-46 |
| MS.gene059584 | MS.gene47566 | 0.800275 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47566.t1 | MTR_4g031220 | 90.299 | 134 | 13 | 0 | 75 | 208 | 1 | 134 | 6.73e-78 | 238 |
| MS.gene47566.t1 | MTR_4g031220 | 90.299 | 134 | 13 | 0 | 75 | 208 | 1 | 134 | 7.63e-77 | 238 |
| MS.gene47566.t1 | MTR_4g031220 | 90.299 | 134 | 13 | 0 | 75 | 208 | 1 | 134 | 7.70e-77 | 238 |
| MS.gene47566.t1 | MTR_4g031220 | 92.661 | 109 | 8 | 0 | 100 | 208 | 4 | 112 | 2.46e-62 | 198 |
| MS.gene47566.t1 | MTR_2g006960 | 78.947 | 95 | 17 | 1 | 289 | 383 | 546 | 637 | 8.89e-40 | 152 |
| MS.gene47566.t1 | MTR_2g006960 | 93.750 | 48 | 3 | 0 | 360 | 407 | 702 | 749 | 3.60e-22 | 99.8 |
| MS.gene47566.t1 | MTR_5g068570 | 94.667 | 75 | 1 | 1 | 1 | 72 | 1 | 75 | 1.47e-39 | 147 |
| MS.gene47566.t1 | MTR_3g093520 | 72.857 | 70 | 17 | 2 | 5 | 72 | 3 | 72 | 2.01e-24 | 105 |
| MS.gene47566.t1 | MTR_6g460700 | 66.667 | 51 | 14 | 2 | 5 | 52 | 39 | 89 | 1.56e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47566.t1 | AT1G50510 | 65.414 | 133 | 37 | 1 | 76 | 208 | 3 | 126 | 1.05e-45 | 160 |
| MS.gene47566.t1 | AT3G54190 | 64.615 | 65 | 19 | 1 | 7 | 71 | 3 | 63 | 8.56e-20 | 91.7 |
| MS.gene47566.t1 | AT2G38630 | 62.121 | 66 | 20 | 2 | 7 | 71 | 4 | 65 | 1.77e-17 | 83.2 |
| MS.gene47566.t1 | AT2G38630 | 62.121 | 66 | 20 | 2 | 7 | 71 | 4 | 65 | 2.27e-17 | 83.6 |
| MS.gene47566.t1 | AT2G38630 | 62.121 | 66 | 20 | 2 | 7 | 71 | 4 | 65 | 3.90e-17 | 83.6 |
| MS.gene47566.t1 | AT1G71220 | 57.407 | 54 | 23 | 0 | 354 | 407 | 669 | 722 | 2.88e-14 | 75.5 |
| MS.gene47566.t1 | AT1G71220 | 42.222 | 90 | 43 | 2 | 289 | 372 | 513 | 599 | 4.58e-13 | 71.6 |
| MS.gene47566.t1 | AT1G71220 | 57.407 | 54 | 23 | 0 | 354 | 407 | 669 | 722 | 2.88e-14 | 75.5 |
| MS.gene47566.t1 | AT1G71220 | 42.222 | 90 | 43 | 2 | 289 | 372 | 513 | 599 | 4.50e-13 | 71.6 |
| MS.gene47566.t1 | AT1G71220 | 57.407 | 54 | 23 | 0 | 354 | 407 | 707 | 760 | 2.97e-14 | 75.5 |
| MS.gene47566.t1 | AT1G71220 | 42.222 | 90 | 43 | 2 | 289 | 372 | 551 | 637 | 4.60e-13 | 71.6 |
Find 90 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACAGGAACAAGTGTATTT+TGG | 0.236459 | 4.3:+25366399 | MS.gene47566:CDS |
| TGACATCTTCAGCAGCTTTA+CGG | 0.284366 | 4.3:+25361726 | MS.gene47566:CDS |
| GCATATGTTGTGAGTGCTTT+TGG | 0.306875 | 4.3:+25362771 | MS.gene47566:CDS |
| GGTCGTGGTGGTGCCGGTGA+TGG | 0.335031 | 4.3:+25361272 | MS.gene47566:CDS |
| ACTTGAAAGGTTAGCTACTT+TGG | 0.339699 | 4.3:+25362713 | MS.gene47566:CDS |
| AAATTTATCTCCATCCTCTT+TGG | 0.340208 | 4.3:-25365839 | None:intergenic |
| TCTAAAATTGCAATAGTTGC+AGG | 0.353501 | 4.3:-25362259 | None:intergenic |
| ACTAAACCCACGAACACTTT+TGG | 0.362386 | 4.3:-25361339 | None:intergenic |
| CTTGAAAGGTTAGCTACTTT+GGG | 0.365927 | 4.3:+25362714 | MS.gene47566:CDS |
| AGCTATATCAAGGGGAACTA+TGG | 0.372428 | 4.3:+25365996 | MS.gene47566:CDS |
| ATGGGTTTATCAACAGTGTT+AGG | 0.376927 | 4.3:+25361291 | MS.gene47566:CDS |
| AAAATCTCACACTGATGTAT+TGG | 0.390851 | 4.3:+25366428 | MS.gene47566:CDS |
| GCATACATACATATGATCTA+TGG | 0.393907 | 4.3:-25362799 | None:intergenic |
| AAAGTACATCACACAGTTAG+AGG | 0.396548 | 4.3:+25365807 | MS.gene47566:CDS |
| GTCGTGGTGGTGCCGGTGAT+GGG | 0.402381 | 4.3:+25361273 | MS.gene47566:CDS |
| TGCGGGCGACATATCTGATA+TGG | 0.403761 | 4.3:+25365861 | MS.gene47566:CDS |
| GAGGATGGAGATAAATTTGC+GGG | 0.424274 | 4.3:+25365844 | MS.gene47566:CDS |
| TTATTTGAATAGGTCTAAGT+TGG | 0.424654 | 4.3:+25362685 | MS.gene47566:intron |
| GAAATGGAAGGTGGTGGTGG+TGG | 0.425480 | 4.3:+25361185 | None:intergenic |
| ATTCCGCAATATCCGTTTGA+AGG | 0.430337 | 4.3:+25361382 | MS.gene47566:CDS |
| TCAAGACCACAAGTGGTTGC+TGG | 0.446956 | 4.3:-25365610 | None:intergenic |
| AAATTTGCAAACTGCGAAAG+AGG | 0.448124 | 4.3:+25362204 | MS.gene47566:CDS |
| AAGCAAGGTCGTGGTGGTGC+CGG | 0.460182 | 4.3:+25361266 | MS.gene47566:CDS |
| CGTGAAATGGAAGGTGGTGG+TGG | 0.462981 | 4.3:+25361182 | None:intergenic |
| GTTGAATACCAGCTTCTGAT+AGG | 0.464415 | 4.3:-25366458 | None:intergenic |
| TGGGCGTGCAGTTGTTGCTC+TGG | 0.465235 | 4.3:+25362050 | MS.gene47566:CDS |
| AAACAATCTTCGACGACACT+TGG | 0.469924 | 4.3:+25361751 | MS.gene47566:CDS |
| GGGGAACTATGGTATTGAAA+TGG | 0.472866 | 4.3:+25366007 | MS.gene47566:CDS |
| TCTCTGAGTCTCATCATTCA+AGG | 0.474928 | 4.3:-25366376 | None:intergenic |
| AAATGGAAGGTGGTGGTGGT+GGG | 0.476235 | 4.3:+25361186 | None:intergenic |
| GTTTCTGAAGCGTTATCACT+TGG | 0.477839 | 4.3:+25362030 | MS.gene47566:CDS |
| ACGTCTCTTCAGCTATATCA+AGG | 0.480183 | 4.3:+25365986 | MS.gene47566:CDS |
| TAACCTTCATTAGTGGGCTA+AGG | 0.487514 | 4.3:-25363737 | None:intergenic |
| CTTGATCCAGCAACCACTTG+TGG | 0.489525 | 4.3:+25365604 | MS.gene47566:CDS |
| ATGTTTGATGTGCAGCATAC+AGG | 0.490157 | 4.3:+25361958 | MS.gene47566:intron |
| ATTTCTACCAAAAGTGTTCG+TGG | 0.493930 | 4.3:+25361332 | MS.gene47566:CDS |
| AATGCACTAACCTTCATTAG+TGG | 0.506837 | 4.3:-25363744 | None:intergenic |
| TGGAAGGTGGTGGTGGTGGG+AGG | 0.509126 | 4.3:+25361189 | MS.gene47566:CDS |
| GTATTCAACGCTATAATCCT+CGG | 0.511958 | 4.3:+25366472 | MS.gene47566:CDS |
| TAGAATACCATGTGAAATGA+TGG | 0.512409 | 4.3:-25362079 | None:intergenic |
| GACAAATTCCTATCAGAAGC+TGG | 0.515961 | 4.3:+25366450 | MS.gene47566:CDS |
| TATTTGAATAGGTCTAAGTT+GGG | 0.519069 | 4.3:+25362686 | MS.gene47566:intron |
| AGCCCTTAGCCCACTAATGA+AGG | 0.519209 | 4.3:+25363734 | MS.gene47566:CDS |
| CGTCGGCCACAACAAGGTCT+TGG | 0.520490 | 4.3:-25361227 | None:intergenic |
| TTTCTACCAAAAGTGTTCGT+GGG | 0.521591 | 4.3:+25361333 | MS.gene47566:CDS |
| CAATGACATGATCATATCAA+TGG | 0.522376 | 4.3:-25365737 | None:intergenic |
| ACAGGTTAGACCGTATCTAC+AGG | 0.523653 | 4.3:+25365218 | MS.gene47566:CDS |
| CAAACTGCGAAAGAGGTTGA+AGG | 0.526352 | 4.3:+25362211 | MS.gene47566:CDS |
| ATCCACCTCACCTGTAGATA+CGG | 0.535977 | 4.3:-25365228 | None:intergenic |
| CAATGTGAAGGTAGCTTCAG+AGG | 0.537312 | 4.3:+25362008 | MS.gene47566:CDS |
| TATTCAACGCTATAATCCTC+GGG | 0.538721 | 4.3:+25366473 | MS.gene47566:CDS |
| CGTCTCTTCAGCTATATCAA+GGG | 0.540850 | 4.3:+25365987 | MS.gene47566:CDS |
| AACCTTCATTAGTGGGCTAA+GGG | 0.542186 | 4.3:-25363736 | None:intergenic |
| TGATGAGACTCAGAGAATAC+AGG | 0.549749 | 4.3:+25366383 | MS.gene47566:CDS |
| TTTCTGAAGCGTTATCACTT+GGG | 0.556780 | 4.3:+25362031 | MS.gene47566:CDS |
| AGCAACCACTTGTGGTCTTG+AGG | 0.559104 | 4.3:+25365612 | MS.gene47566:CDS |
| CATACAGGAGTTAATGCTGT+TGG | 0.561292 | 4.3:+25361973 | MS.gene47566:CDS |
| GATCATTCTACCAAAGAGGA+TGG | 0.562348 | 4.3:+25365829 | MS.gene47566:CDS |
| AGCTCAGAAAACAGCTCGAA+GGG | 0.563723 | 4.3:+25362743 | MS.gene47566:CDS |
| TGAGAAAAGGAACCTTCAAA+CGG | 0.564827 | 4.3:-25361394 | None:intergenic |
| GCGAAGAAGAAGCAAGGTCG+TGG | 0.567056 | 4.3:+25361257 | MS.gene47566:CDS |
| ACCTTGTTGTGGCCGACGTG+TGG | 0.570409 | 4.3:+25361232 | MS.gene47566:CDS |
| TAAGTTGGGAAGAACTTGAA+AGG | 0.573929 | 4.3:+25362700 | MS.gene47566:CDS |
| TTGTTGTGGCCGACGTGTGG+TGG | 0.576610 | 4.3:+25361235 | MS.gene47566:CDS |
| GAGAACTAAGGCTGTAACAG+AGG | 0.579135 | 4.3:+25365180 | MS.gene47566:CDS |
| AGAGGATGGAGATAAATTTG+CGG | 0.584425 | 4.3:+25365843 | MS.gene47566:CDS |
| ACTTGCCTCAAGACCACAAG+TGG | 0.585176 | 4.3:-25365617 | None:intergenic |
| GGAGTTGGCCGTGAAATGGA+AGG | 0.587151 | 4.3:+25361173 | None:intergenic |
| GAAGGTATTGTGAGAGAGAA+CGG | 0.587911 | 4.3:+25362229 | MS.gene47566:CDS |
| ATGCACTAACCTTCATTAGT+GGG | 0.590439 | 4.3:-25363743 | None:intergenic |
| AATGGATGACAAGAGAACTA+AGG | 0.597169 | 4.3:+25365168 | MS.gene47566:CDS |
| GGCCGTGAAATGGAAGGTGG+TGG | 0.597875 | 4.3:+25361179 | None:intergenic |
| AGACAATAAATACCTACGAT+AGG | 0.609485 | 4.3:-25362289 | None:intergenic |
| GAGCTCAGAAAACAGCTCGA+AGG | 0.611591 | 4.3:+25362742 | MS.gene47566:CDS |
| TTAGATGGCGTGCCTATCGT+AGG | 0.613078 | 4.3:+25362277 | MS.gene47566:CDS |
| ACTGTTGATAAACCCATCAC+CGG | 0.614575 | 4.3:-25361285 | None:intergenic |
| ATTACAACTCCAAATCTCAC+AGG | 0.615230 | 4.3:-25365775 | None:intergenic |
| GAACCTTCAAACGGATATTG+CGG | 0.621364 | 4.3:-25361385 | None:intergenic |
| GTCTCTTCAGCTATATCAAG+GGG | 0.623088 | 4.3:+25365988 | MS.gene47566:CDS |
| AGCGTGAGCAGAATCATAAG+TGG | 0.624166 | 4.3:-25363693 | None:intergenic |
| AGCTTCGTCAATCAATGTGA+AGG | 0.629269 | 4.3:+25361996 | MS.gene47566:CDS |
| ACCACACGTCGGCCACAACA+AGG | 0.637515 | 4.3:-25361233 | None:intergenic |
| TTCGTCTGACACAGTCAACA+AGG | 0.640187 | 4.3:+25361775 | MS.gene47566:CDS |
| AGAGGATCATTCTACCAAAG+AGG | 0.649479 | 4.3:+25365825 | MS.gene47566:CDS |
| GTGGTGGCGAAGAAGAAGCA+AGG | 0.655830 | 4.3:+25361251 | MS.gene47566:CDS |
| GAATCTACCATCATTTCACA+TGG | 0.666324 | 4.3:+25362072 | MS.gene47566:CDS |
| AAGAAGAAGCAAGGTCGTGG+TGG | 0.677858 | 4.3:+25361260 | MS.gene47566:CDS |
| TCAAGTCCAAGACCTTGTTG+TGG | 0.684451 | 4.3:+25361221 | MS.gene47566:CDS |
| GTTGGCCGTGAAATGGAAGG+TGG | 0.685934 | 4.3:+25361176 | None:intergenic |
| TCTTCTTCGCCACCACACGT+CGG | 0.743610 | 4.3:-25361244 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAATTTATGAAACA+TGG | - | chr4.3:25363478-25363497 | None:intergenic | 10.0% |
| !!! | AATTATATTATTTCTGTAAT+TGG | + | chr4.3:25363487-25363506 | MS.gene47566:intron | 10.0% |
| !!! | CATAACTATAAATTTAAAAT+TGG | - | chr4.3:25365328-25365347 | None:intergenic | 10.0% |
| !! | TTTAATCAATGCATTATTAT+TGG | + | chr4.3:25365389-25365408 | MS.gene47566:intron | 15.0% |
| !!! | TCTTTACTTGTTATATTTTA+GGG | + | chr4.3:25363982-25364001 | MS.gene47566:intron | 15.0% |
| !! | AAAAAATCAACTAAATTAGG+TGG | - | chr4.3:25363641-25363660 | None:intergenic | 20.0% |
| !! | AAAAATCAACTAAATTAGGT+GGG | - | chr4.3:25363640-25363659 | None:intergenic | 20.0% |
| !! | AAGAAGATTAATAGTTAAAC+AGG | - | chr4.3:25366274-25366293 | None:intergenic | 20.0% |
| !! | AGACCTATAAAATTACATTA+TGG | + | chr4.3:25364640-25364659 | MS.gene47566:intron | 20.0% |
| !! | AGTCAATACTTATACTTATT+AGG | - | chr4.3:25365430-25365449 | None:intergenic | 20.0% |
| !! | ATAATCCAAAAACTAAGATA+CGG | - | chr4.3:25362154-25362173 | None:intergenic | 20.0% |
| !! | ATATAATTTATGAAACATGG+TGG | - | chr4.3:25363475-25363494 | None:intergenic | 20.0% |
| !! | CATTAATAATTGTCATAAGA+TGG | + | chr4.3:25361522-25361541 | MS.gene47566:intron | 20.0% |
| !! | TCAATTAGAAAGAATGTAAT+TGG | + | chr4.3:25362913-25362932 | MS.gene47566:intron | 20.0% |
| !! | TGCAAAAAATCAACTAAATT+AGG | - | chr4.3:25363644-25363663 | None:intergenic | 20.0% |
| !!! | ACATTATTGCTTTTGAAATA+TGG | + | chr4.3:25364903-25364922 | MS.gene47566:intron | 20.0% |
| !!! | ATTTGCTCTTTTATTTGAAT+AGG | + | chr4.3:25362675-25362694 | MS.gene47566:intron | 20.0% |
| !!! | CACTAGTAATATTCATTTTT+AGG | + | chr4.3:25363394-25363413 | MS.gene47566:intron | 20.0% |
| !!! | CTCTTTACTTGTTATATTTT+AGG | + | chr4.3:25363981-25364000 | MS.gene47566:intron | 20.0% |
| !!! | CTTTACTTGTTATATTTTAG+GGG | + | chr4.3:25363983-25364002 | MS.gene47566:intron | 20.0% |
| !!! | GAACCATAATGTAATTTTAT+AGG | - | chr4.3:25364646-25364665 | None:intergenic | 20.0% |
| !!! | GTATTCTATATCTTTTCATA+TGG | + | chr4.3:25362094-25362113 | MS.gene47566:intron | 20.0% |
| !!! | GTCGTTTATTTTGAAAAAAA+TGG | + | chr4.3:25363911-25363930 | MS.gene47566:intron | 20.0% |
| !!! | TTCGGAATATATTTTTATCA+AGG | + | chr4.3:25362997-25363016 | MS.gene47566:intron | 20.0% |
| !!! | TTTAATCAATTGATTTTACC+AGG | + | chr4.3:25366338-25366357 | MS.gene47566:intron | 20.0% |
| !!! | TTTTGCACTTTCAATTAATT+CGG | + | chr4.3:25363657-25363676 | MS.gene47566:intron | 20.0% |
| ! | AAAGAATTGAGATTGAGAAA+AGG | - | chr4.3:25361410-25361429 | None:intergenic | 25.0% |
| ! | AACAAACATTTGCAATCATT+GGG | - | chr4.3:25362610-25362629 | None:intergenic | 25.0% |
| ! | AATATTACTAGTGACTTACT+AGG | - | chr4.3:25363387-25363406 | None:intergenic | 25.0% |
| ! | AGTATATATACCATACATAG+AGG | + | chr4.3:25364864-25364883 | MS.gene47566:intron | 25.0% |
| ! | ATAAAGTATGATTTCGATAC+TGG | + | chr4.3:25362441-25362460 | MS.gene47566:intron | 25.0% |
| ! | CTGAAGAAATCAAATAAGAA+TGG | - | chr4.3:25363282-25363301 | None:intergenic | 25.0% |
| ! | GAAATCAAATAAGAATGGTA+AGG | - | chr4.3:25363277-25363296 | None:intergenic | 25.0% |
| ! | GTTTGCATAGATAAACAATT+TGG | + | chr4.3:25364401-25364420 | MS.gene47566:intron | 25.0% |
| ! | TAAATAAAAGCAGCAAAACA+AGG | - | chr4.3:25366105-25366124 | None:intergenic | 25.0% |
| ! | TAAATCCTTGAATATTAAGC+AGG | + | chr4.3:25361697-25361716 | MS.gene47566:intron | 25.0% |
| ! | TAATACTTGATTCTCAAACT+AGG | + | chr4.3:25365452-25365471 | MS.gene47566:intron | 25.0% |
| ! | TATCTCAAAACTGTATATGT+TGG | + | chr4.3:25363196-25363215 | MS.gene47566:intron | 25.0% |
| ! | TATTTGAATAGGTCTAAGTT+GGG | + | chr4.3:25362686-25362705 | MS.gene47566:intron | 25.0% |
| ! | TGAATGTAAGAACTTTCAAA+AGG | - | chr4.3:25361882-25361901 | None:intergenic | 25.0% |
| ! | TGAGTTTCTATATGTTAAGT+TGG | + | chr4.3:25365070-25365089 | MS.gene47566:intron | 25.0% |
| ! | TGCAAATTAGTACTCAAATT+AGG | - | chr4.3:25364564-25364583 | None:intergenic | 25.0% |
| ! | TGTTCTCTTCATTACAAATA+TGG | + | chr4.3:25362477-25362496 | MS.gene47566:intron | 25.0% |
| ! | TTATTTGAATAGGTCTAAGT+TGG | + | chr4.3:25362685-25362704 | MS.gene47566:intron | 25.0% |
| ! | TTCATTACAAATATGGATGT+TGG | + | chr4.3:25362484-25362503 | MS.gene47566:intron | 25.0% |
| ! | TTTCTTACTGAAATCTTTCA+TGG | + | chr4.3:25365685-25365704 | MS.gene47566:intron | 25.0% |
| ! | TTTGCAACAAATAGTAATGA+TGG | - | chr4.3:25361826-25361845 | None:intergenic | 25.0% |
| !! | AACTTTTAACATTGTCTAAG+TGG | + | chr4.3:25363780-25363799 | MS.gene47566:intron | 25.0% |
| !! | ACACAAGAAAGTGTAAAATT+CGG | + | chr4.3:25363570-25363589 | MS.gene47566:intron | 25.0% |
| !! | CATTCTTATTTGATTTCTTC+AGG | + | chr4.3:25363280-25363299 | MS.gene47566:intron | 25.0% |
| !! | GAATTGTTTGTTAACCTTTA+CGG | - | chr4.3:25364428-25364447 | None:intergenic | 25.0% |
| !! | TGTCTTCTTATAATTTGCAA+TGG | + | chr4.3:25365036-25365055 | MS.gene47566:intron | 25.0% |
| !! | TTCATACTTATAACTTGCAA+TGG | + | chr4.3:25364959-25364978 | MS.gene47566:intron | 25.0% |
| !! | TTGTTTTCCATATTTTTCTG+AGG | + | chr4.3:25365277-25365296 | MS.gene47566:intron | 25.0% |
| !! | TTTCTCTAAGAATAAGAACA+TGG | - | chr4.3:25364250-25364269 | None:intergenic | 25.0% |
| !!! | AGAATACACGAACATTTTTT+AGG | + | chr4.3:25365906-25365925 | MS.gene47566:intron | 25.0% |
| !!! | GTTTAGGTGGTATTATTTTT+AGG | + | chr4.3:25363421-25363440 | MS.gene47566:intron | 25.0% |
| !!! | TGATGTTTTTTATATGCATG+TGG | + | chr4.3:25361479-25361498 | MS.gene47566:intron | 25.0% |
| !!! | TTAACATGGTTTTGATTCTA+AGG | + | chr4.3:25364136-25364155 | MS.gene47566:intron | 25.0% |
| !!! | TTCATTTTTAGGTTCTGTTT+AGG | + | chr4.3:25363405-25363424 | MS.gene47566:intron | 25.0% |
| AAAAGATGGCTGAAGATATT+CGG | + | chr4.3:25362979-25362998 | MS.gene47566:intron | 30.0% | |
| AAAATCTCACACTGATGTAT+TGG | + | chr4.3:25366428-25366447 | MS.gene47566:CDS | 30.0% | |
| AAATTTATCTCCATCCTCTT+TGG | - | chr4.3:25365842-25365861 | None:intergenic | 30.0% | |
| AACATACAATGAAACAAAGC+AGG | - | chr4.3:25364189-25364208 | None:intergenic | 30.0% | |
| AACATTGTCTAAGTGGAAAA+GGG | + | chr4.3:25363787-25363806 | MS.gene47566:intron | 30.0% | |
| AACCTAAATCAAGATCAGTT+TGG | - | chr4.3:25364508-25364527 | None:intergenic | 30.0% | |
| AACTACCTGCTTAATATTCA+AGG | - | chr4.3:25361705-25361724 | None:intergenic | 30.0% | |
| ACAAACATTTGCAATCATTG+GGG | - | chr4.3:25362609-25362628 | None:intergenic | 30.0% | |
| ACAAGAAACAAGATCAAAGA+AGG | - | chr4.3:25364732-25364751 | None:intergenic | 30.0% | |
| ACATTATGGTTCACCATAAT+TGG | + | chr4.3:25364654-25364673 | MS.gene47566:intron | 30.0% | |
| AGAACAAAAGCAGTATAGTT+GGG | - | chr4.3:25364215-25364234 | None:intergenic | 30.0% | |
| AGACAATAAATACCTACGAT+AGG | - | chr4.3:25362292-25362311 | None:intergenic | 30.0% | |
| AGGTATTTATTGTCTACCTT+CGG | + | chr4.3:25362297-25362316 | MS.gene47566:intron | 30.0% | |
| ATAAACAATTTGGTCCGTAA+AGG | + | chr4.3:25364411-25364430 | MS.gene47566:intron | 30.0% | |
| ATCATACAGCCATCTTAATT+CGG | + | chr4.3:25364677-25364696 | MS.gene47566:intron | 30.0% | |
| ATCCTTAGATTAGAATCTGT+TGG | + | chr4.3:25362847-25362866 | MS.gene47566:intron | 30.0% | |
| CAACAAACATTTGCAATCAT+TGG | - | chr4.3:25362611-25362630 | None:intergenic | 30.0% | |
| CAATGACATGATCATATCAA+TGG | - | chr4.3:25365740-25365759 | None:intergenic | 30.0% | |
| CAGGTATAGCTAACAATTAA+CGG | - | chr4.3:25364103-25364122 | None:intergenic | 30.0% | |
| CCACATTGAGATAATCATAT+GGG | - | chr4.3:25363111-25363130 | None:intergenic | 30.0% | |
| CGTGTATTCTTAAACTGTTA+AGG | - | chr4.3:25365896-25365915 | None:intergenic | 30.0% | |
| CTTGTTTCCAATTAACTAGA+AGG | + | chr4.3:25364586-25364605 | MS.gene47566:intron | 30.0% | |
| CTTTCAATTAATTCGGTTCT+AGG | + | chr4.3:25363664-25363683 | MS.gene47566:intron | 30.0% | |
| GATGATATAGAACGATGTTT+CGG | + | chr4.3:25364477-25364496 | MS.gene47566:intron | 30.0% | |
| GCATACATACATATGATCTA+TGG | - | chr4.3:25362802-25362821 | None:intergenic | 30.0% | |
| GTCAATTGGTGAATTTAACA+TGG | + | chr4.3:25364122-25364141 | MS.gene47566:intron | 30.0% | |
| TAACATTGTCTAAGTGGAAA+AGG | + | chr4.3:25363786-25363805 | MS.gene47566:intron | 30.0% | |
| TACCGTACGTTAAAAAAAGA+TGG | + | chr4.3:25362965-25362984 | MS.gene47566:intron | 30.0% | |
| TAGAATACCATGTGAAATGA+TGG | - | chr4.3:25362082-25362101 | None:intergenic | 30.0% | |
| TCAAGAAAACAGCAATAGTT+TGG | + | chr4.3:25364355-25364374 | MS.gene47566:intron | 30.0% | |
| TCCACATTGAGATAATCATA+TGG | - | chr4.3:25363112-25363131 | None:intergenic | 30.0% | |
| TGATATGTAGCCAAATTATG+TGG | - | chr4.3:25364612-25364631 | None:intergenic | 30.0% | |
| TGTTAAATTCACCAATTGAC+AGG | - | chr4.3:25364122-25364141 | None:intergenic | 30.0% | |
| TTATGCACCTCAGAAAAATA+TGG | - | chr4.3:25365287-25365306 | None:intergenic | 30.0% | |
| TTGAAGAAAAAACATGCTTC+TGG | + | chr4.3:25363349-25363368 | MS.gene47566:intron | 30.0% | |
| ! | AATAGTTTTCCTGTGAGATT+TGG | + | chr4.3:25365766-25365785 | MS.gene47566:CDS | 30.0% |
| ! | ATACAGGAACAAGTGTATTT+TGG | + | chr4.3:25366399-25366418 | MS.gene47566:CDS | 30.0% |
| ! | ATGTTTTTCCAGATTAGACA+TGG | + | chr4.3:25363544-25363563 | MS.gene47566:intron | 30.0% |
| ! | CAGCATGGAAAAGATTTTTA+CGG | - | chr4.3:25365576-25365595 | None:intergenic | 30.0% |
| ! | CGTTTATCTTTTAGATGTCA+TGG | - | chr4.3:25362573-25362592 | None:intergenic | 30.0% |
| ! | GCAACTATTGCAATTTTAGA+TGG | + | chr4.3:25362262-25362281 | MS.gene47566:CDS | 30.0% |
| ! | GTTCTGTTTTCTTCTTGAAT+TGG | + | chr4.3:25364525-25364544 | MS.gene47566:intron | 30.0% |
| ! | TAGCATGAAAATGTTAGTCT+TGG | - | chr4.3:25365651-25365670 | None:intergenic | 30.0% |
| ! | TCTAAAATTGCAATAGTTGC+AGG | - | chr4.3:25362262-25362281 | None:intergenic | 30.0% |
| ! | TGATCTGGTGTATAATTTGT+TGG | - | chr4.3:25366138-25366157 | None:intergenic | 30.0% |
| !! | AATCAATTGATTTTACCAGG+AGG | + | chr4.3:25366341-25366360 | MS.gene47566:intron | 30.0% |
| !! | AGCATGAAAATGTTAGTCTT+GGG | - | chr4.3:25365650-25365669 | None:intergenic | 30.0% |
| !! | CTGTTTTCTTGAACTGATTT+TGG | - | chr4.3:25364347-25364366 | None:intergenic | 30.0% |
| !! | GAAATCCGTATCTTAGTTTT+TGG | + | chr4.3:25362146-25362165 | MS.gene47566:intron | 30.0% |
| !! | GCTTTGTTTCATTGTATGTT+AGG | + | chr4.3:25364189-25364208 | MS.gene47566:intron | 30.0% |
| !! | GTTTGCAAATTTTGAGGATA+TGG | - | chr4.3:25362196-25362215 | None:intergenic | 30.0% |
| !! | TCAAGTTTTTGAGCAATGTA+TGG | + | chr4.3:25366033-25366052 | MS.gene47566:intron | 30.0% |
| !! | TGCATTGATTAAACCTTGTT+CGG | - | chr4.3:25365382-25365401 | None:intergenic | 30.0% |
| !! | TTTTCTGTAGTTTGGTAGTT+TGG | + | chr4.3:25364811-25364830 | MS.gene47566:intron | 30.0% |
| !!! | AGCCATCTTTTTTTAACGTA+CGG | - | chr4.3:25362970-25362989 | None:intergenic | 30.0% |
| !!! | AGGTTTTTTATCACTCTGTT+TGG | - | chr4.3:25361661-25361680 | None:intergenic | 30.0% |
| !!! | ATTTTTAGGTTCTGTTTAGG+TGG | + | chr4.3:25363408-25363427 | MS.gene47566:intron | 30.0% |
| !!! | CATTTTTTAGGAGAGTTTTC+TGG | + | chr4.3:25365918-25365937 | MS.gene47566:intron | 30.0% |
| !!! | GGATTATGATCTTGTTTTCA+GGG | + | chr4.3:25362167-25362186 | MS.gene47566:intron | 30.0% |
| !!! | TGGATTATGATCTTGTTTTC+AGG | + | chr4.3:25362166-25362185 | MS.gene47566:intron | 30.0% |
| AAAGATAAGTCGATCCAAAC+AGG | - | chr4.3:25366174-25366193 | None:intergenic | 35.0% | |
| AAAGTACATCACACAGTTAG+AGG | + | chr4.3:25365807-25365826 | MS.gene47566:CDS | 35.0% | |
| AAATTTGCAAACTGCGAAAG+AGG | + | chr4.3:25362204-25362223 | MS.gene47566:CDS | 35.0% | |
| AACTAGAAGGCCACATAATT+TGG | + | chr4.3:25364599-25364618 | MS.gene47566:intron | 35.0% | |
| AATCAACTAAATTAGGTGGG+TGG | - | chr4.3:25363637-25363656 | None:intergenic | 35.0% | |
| AATGCACTAACCTTCATTAG+TGG | - | chr4.3:25363747-25363766 | None:intergenic | 35.0% | |
| AATGGATGACAAGAGAACTA+AGG | + | chr4.3:25365168-25365187 | MS.gene47566:CDS | 35.0% | |
| AATGTGGAATTTGTGTTCTG+TGG | + | chr4.3:25363124-25363143 | MS.gene47566:intron | 35.0% | |
| ACACCAGATCAATATGACTT+AGG | + | chr4.3:25366147-25366166 | MS.gene47566:intron | 35.0% | |
| AGAAGGTGATTGTGTTTACA+TGG | - | chr4.3:25364715-25364734 | None:intergenic | 35.0% | |
| AGAGGATGGAGATAAATTTG+CGG | + | chr4.3:25365843-25365862 | MS.gene47566:CDS | 35.0% | |
| AGATCAGATGCATACAAGTA+AGG | - | chr4.3:25363319-25363338 | None:intergenic | 35.0% | |
| AGCCAAACTGATCTTGATTT+AGG | + | chr4.3:25364503-25364522 | MS.gene47566:intron | 35.0% | |
| ATCATATGGGTGTCTTATGA+AGG | - | chr4.3:25363098-25363117 | None:intergenic | 35.0% | |
| ATGCACTAACCTTCATTAGT+GGG | - | chr4.3:25363746-25363765 | None:intergenic | 35.0% | |
| ATGGCTGTATGATCCAATTA+TGG | - | chr4.3:25364670-25364689 | None:intergenic | 35.0% | |
| ATGGGTTTATCAACAGTGTT+AGG | + | chr4.3:25361291-25361310 | MS.gene47566:CDS | 35.0% | |
| ATTACAACTCCAAATCTCAC+AGG | - | chr4.3:25365778-25365797 | None:intergenic | 35.0% | |
| CAATTCAGTTCTGCAAAGAT+AGG | + | chr4.3:25364442-25364461 | MS.gene47566:intron | 35.0% | |
| CACCAGATCAATATGACTTA+GGG | + | chr4.3:25366148-25366167 | MS.gene47566:intron | 35.0% | |
| CCCATATGATTATCTCAATG+TGG | + | chr4.3:25363108-25363127 | MS.gene47566:intron | 35.0% | |
| CGTTCAACTCAATCGAAAAA+GGG | + | chr4.3:25363832-25363851 | MS.gene47566:intron | 35.0% | |
| GAATCTACCATCATTTCACA+TGG | + | chr4.3:25362072-25362091 | MS.gene47566:CDS | 35.0% | |
| GACCAACAGATTCTAATCTA+AGG | - | chr4.3:25362852-25362871 | None:intergenic | 35.0% | |
| GAGAACAAAAGCAGTATAGT+TGG | - | chr4.3:25364216-25364235 | None:intergenic | 35.0% | |
| GATATTCTTGTATCCGAACA+AGG | + | chr4.3:25365366-25365385 | MS.gene47566:intron | 35.0% | |
| GATCAAGAACAAAAACAGCA+TGG | - | chr4.3:25365591-25365610 | None:intergenic | 35.0% | |
| GTATGTCATACTTGACTATG+TGG | + | chr4.3:25363514-25363533 | MS.gene47566:intron | 35.0% | |
| GTATTCAACGCTATAATCCT+CGG | + | chr4.3:25366472-25366491 | MS.gene47566:CDS | 35.0% | |
| TATTCAACGCTATAATCCTC+GGG | + | chr4.3:25366473-25366492 | MS.gene47566:CDS | 35.0% | |
| TCATTTCCGCACACTTATTT+GGG | - | chr4.3:25364289-25364308 | None:intergenic | 35.0% | |
| TCGTTCAACTCAATCGAAAA+AGG | + | chr4.3:25363831-25363850 | MS.gene47566:intron | 35.0% | |
| TGAGAAAAGGAACCTTCAAA+CGG | - | chr4.3:25361397-25361416 | None:intergenic | 35.0% | |
| TGTACATCTTTCCACTTCTT+TGG | - | chr4.3:25362881-25362900 | None:intergenic | 35.0% | |
| TGTTAGCTATACCTGTCAAT+TGG | + | chr4.3:25364108-25364127 | MS.gene47566:intron | 35.0% | |
| ! | AAGGTAACTGATAGTGTTCT+TGG | + | chr4.3:25364155-25364174 | MS.gene47566:intron | 35.0% |
| ! | ACTTGAAAGGTTAGCTACTT+TGG | + | chr4.3:25362713-25362732 | MS.gene47566:CDS | 35.0% |
| ! | CTTGAAAGGTTAGCTACTTT+GGG | + | chr4.3:25362714-25362733 | MS.gene47566:CDS | 35.0% |
| ! | TAAGTTGGGAAGAACTTGAA+AGG | + | chr4.3:25362700-25362719 | MS.gene47566:CDS | 35.0% |
| ! | TATGTGGCCTTCTAGTTAAT+TGG | - | chr4.3:25364596-25364615 | None:intergenic | 35.0% |
| ! | TTCGCAGTTTGCAAATTTTG+AGG | - | chr4.3:25362202-25362221 | None:intergenic | 35.0% |
| !! | ATTTCTACCAAAAGTGTTCG+TGG | + | chr4.3:25361332-25361351 | MS.gene47566:CDS | 35.0% |
| !! | GATGTTTGTTGTTGCAATGT+TGG | + | chr4.3:25364036-25364055 | MS.gene47566:intron | 35.0% |
| !! | GCATGAAAATGTTAGTCTTG+GGG | - | chr4.3:25365649-25365668 | None:intergenic | 35.0% |
| !! | TTTAGCTTTCTAACAGCTCA+AGG | - | chr4.3:25361681-25361700 | None:intergenic | 35.0% |
| !! | TTTCTACCAAAAGTGTTCGT+GGG | + | chr4.3:25361333-25361352 | MS.gene47566:CDS | 35.0% |
| !! | TTTCTGAAGCGTTATCACTT+GGG | + | chr4.3:25362031-25362050 | MS.gene47566:CDS | 35.0% |
| !!! | TCGTACTCGTGTTATTTTTG+TGG | + | chr4.3:25362416-25362435 | MS.gene47566:intron | 35.0% |
| !!! | TGGCAACAACACTTTTTCTT+AGG | - | chr4.3:25363455-25363474 | None:intergenic | 35.0% |
| AAACAATCTTCGACGACACT+TGG | + | chr4.3:25361751-25361770 | MS.gene47566:CDS | 40.0% | |
| AAATTGAATGCACAGACCGA+AGG | - | chr4.3:25362316-25362335 | None:intergenic | 40.0% | |
| AATATGACTTAGGGCCTGTT+TGG | + | chr4.3:25366157-25366176 | MS.gene47566:intron | 40.0% | |
| ACGTCTCTTCAGCTATATCA+AGG | + | chr4.3:25365986-25366005 | MS.gene47566:CDS | 40.0% | |
| AGAGGATCATTCTACCAAAG+AGG | + | chr4.3:25365825-25365844 | MS.gene47566:CDS | 40.0% | |
| AGCCATCTTAATTCGGATCT+CGG | + | chr4.3:25364684-25364703 | MS.gene47566:intron | 40.0% | |
| AGCTATATCAAGGGGAACTA+TGG | + | chr4.3:25365996-25366015 | MS.gene47566:CDS | 40.0% | |
| AGCTTCGTCAATCAATGTGA+AGG | + | chr4.3:25361996-25362015 | MS.gene47566:CDS | 40.0% | |
| ATGTTTGATGTGCAGCATAC+AGG | + | chr4.3:25361958-25361977 | MS.gene47566:intron | 40.0% | |
| ATTCCGCAATATCCGTTTGA+AGG | + | chr4.3:25361382-25361401 | MS.gene47566:CDS | 40.0% | |
| ATTGTCTAAGTGGAAAAGGG+AGG | + | chr4.3:25363790-25363809 | MS.gene47566:intron | 40.0% | |
| ATTTCTTCAGGTATGCCTGT+TGG | + | chr4.3:25363292-25363311 | MS.gene47566:intron | 40.0% | |
| CATACAGGAGTTAATGCTGT+TGG | + | chr4.3:25361973-25361992 | MS.gene47566:CDS | 40.0% | |
| CGTCTCTTCAGCTATATCAA+GGG | + | chr4.3:25365987-25366006 | MS.gene47566:CDS | 40.0% | |
| CTCATTTCCGCACACTTATT+TGG | - | chr4.3:25364290-25364309 | None:intergenic | 40.0% | |
| GAACCTTCAAACGGATATTG+CGG | - | chr4.3:25361388-25361407 | None:intergenic | 40.0% | |
| GACAAATTCCTATCAGAAGC+TGG | + | chr4.3:25366450-25366469 | MS.gene47566:CDS | 40.0% | |
| GAGGATGGAGATAAATTTGC+GGG | + | chr4.3:25365844-25365863 | MS.gene47566:CDS | 40.0% | |
| GATCATTCTACCAAAGAGGA+TGG | + | chr4.3:25365829-25365848 | MS.gene47566:CDS | 40.0% | |
| GTCTCTTCAGCTATATCAAG+GGG | + | chr4.3:25365988-25366007 | MS.gene47566:CDS | 40.0% | |
| GTTGAATACCAGCTTCTGAT+AGG | - | chr4.3:25366461-25366480 | None:intergenic | 40.0% | |
| TACGGATTTCAGTCGTGAAA+AGG | - | chr4.3:25362136-25362155 | None:intergenic | 40.0% | |
| TAGTAGAACGGAACAATAGG+TGG | + | chr4.3:25364766-25364785 | MS.gene47566:intron | 40.0% | |
| TCAACTCAATCGAAAAAGGG+AGG | + | chr4.3:25363835-25363854 | MS.gene47566:intron | 40.0% | |
| TCTATAGCAGCGTAGTAGAA+CGG | + | chr4.3:25364754-25364773 | MS.gene47566:intron | 40.0% | |
| TCTCTGAGTCTCATCATTCA+AGG | - | chr4.3:25366379-25366398 | None:intergenic | 40.0% | |
| TGACATCTTCAGCAGCTTTA+CGG | + | chr4.3:25361726-25361745 | MS.gene47566:CDS | 40.0% | |
| TGAGTAACGATCCTGCAAAT+TGG | + | chr4.3:25362510-25362529 | MS.gene47566:intron | 40.0% | |
| TGATGAGACTCAGAGAATAC+AGG | + | chr4.3:25366383-25366402 | MS.gene47566:CDS | 40.0% | |
| TGGTCTTCTAACCAAAGAAG+TGG | + | chr4.3:25362867-25362886 | MS.gene47566:intron | 40.0% | |
| TGTGTAGACCATGTCTAATC+TGG | - | chr4.3:25363555-25363574 | None:intergenic | 40.0% | |
| ! | AACTCACTAGCCTCTATGTA+TGG | - | chr4.3:25364877-25364896 | None:intergenic | 40.0% |
| ! | ACTAAACCCACGAACACTTT+TGG | - | chr4.3:25361342-25361361 | None:intergenic | 40.0% |
| ! | ACTGTTGATAAACCCATCAC+CGG | - | chr4.3:25361288-25361307 | None:intergenic | 40.0% |
| ! | ATGAGCGGTTTTCTGTAGTT+TGG | + | chr4.3:25364803-25364822 | MS.gene47566:intron | 40.0% |
| ! | CTCTTTTCAGTGCTTCACAA+TGG | + | chr4.3:25365150-25365169 | MS.gene47566:intron | 40.0% |
| ! | CTGTAGTTTGGTAGTTTGGT+GGG | + | chr4.3:25364815-25364834 | MS.gene47566:intron | 40.0% |
| ! | GCATATGTTGTGAGTGCTTT+TGG | + | chr4.3:25362771-25362790 | MS.gene47566:CDS | 40.0% |
| ! | GCTGCTATTGAAAGTATGAG+CGG | + | chr4.3:25364788-25364807 | MS.gene47566:intron | 40.0% |
| ! | GGGGAACTATGGTATTGAAA+TGG | + | chr4.3:25366007-25366026 | MS.gene47566:CDS | 40.0% |
| ! | TCTGAGGTGCATAATAGTCA+TGG | + | chr4.3:25365293-25365312 | MS.gene47566:intron | 40.0% |
| ! | TCTGTAGTTTGGTAGTTTGG+TGG | + | chr4.3:25364814-25364833 | MS.gene47566:intron | 40.0% |
| ! | TTCTTTTCCAGCCAATTTGC+AGG | - | chr4.3:25362524-25362543 | None:intergenic | 40.0% |
| !! | AACCTTCATTAGTGGGCTAA+GGG | - | chr4.3:25363739-25363758 | None:intergenic | 40.0% |
| !! | GAAGGTATTGTGAGAGAGAA+CGG | + | chr4.3:25362229-25362248 | MS.gene47566:CDS | 40.0% |
| !! | GATCATATCAATGGACTGCA+AGG | - | chr4.3:25365731-25365750 | None:intergenic | 40.0% |
| !! | GTTTCTGAAGCGTTATCACT+TGG | + | chr4.3:25362030-25362049 | MS.gene47566:CDS | 40.0% |
| !! | TAACCTTCATTAGTGGGCTA+AGG | - | chr4.3:25363740-25363759 | None:intergenic | 40.0% |
| ACAGGTTAGACCGTATCTAC+AGG | + | chr4.3:25365218-25365237 | MS.gene47566:CDS | 45.0% | |
| AGCCGAGATCCGAATTAAGA+TGG | - | chr4.3:25364689-25364708 | None:intergenic | 45.0% | |
| AGCGTGAGCAGAATCATAAG+TGG | - | chr4.3:25363696-25363715 | None:intergenic | 45.0% | |
| AGCTCAGAAAACAGCTCGAA+GGG | + | chr4.3:25362743-25362762 | MS.gene47566:CDS | 45.0% | |
| ATCCACCTCACCTGTAGATA+CGG | - | chr4.3:25365231-25365250 | None:intergenic | 45.0% | |
| ATCTACAGGTGAGGTGGATA+AGG | + | chr4.3:25365232-25365251 | MS.gene47566:intron | 45.0% | |
| CAAACTGCGAAAGAGGTTGA+AGG | + | chr4.3:25362211-25362230 | MS.gene47566:CDS | 45.0% | |
| CAATGTGAAGGTAGCTTCAG+AGG | + | chr4.3:25362008-25362027 | MS.gene47566:CDS | 45.0% | |
| CTGACACAGTCAACAAGGTA+CGG | + | chr4.3:25361780-25361799 | MS.gene47566:intron | 45.0% | |
| GAGAACTAAGGCTGTAACAG+AGG | + | chr4.3:25365180-25365199 | MS.gene47566:CDS | 45.0% | |
| GCATACAAGTAAGGACCAAC+AGG | - | chr4.3:25363310-25363329 | None:intergenic | 45.0% | |
| GCGTAGTAGAACGGAACAAT+AGG | + | chr4.3:25364763-25364782 | MS.gene47566:intron | 45.0% | |
| GGCCCTAAGTCATATTGATC+TGG | - | chr4.3:25366153-25366172 | None:intergenic | 45.0% | |
| TAACGATCCTGCAAATTGGC+TGG | + | chr4.3:25362514-25362533 | MS.gene47566:intron | 45.0% | |
| TCAAGTCCAAGACCTTGTTG+TGG | + | chr4.3:25361221-25361240 | MS.gene47566:CDS | 45.0% | |
| TCGAAAAAGGGAGGTTGTTG+TGG | + | chr4.3:25363844-25363863 | MS.gene47566:intron | 45.0% | |
| TCGACACCCAAATAAGTGTG+CGG | + | chr4.3:25364280-25364299 | MS.gene47566:intron | 45.0% | |
| TGGAAAAGGGAGGTTGTTGT+CGG | + | chr4.3:25363800-25363819 | MS.gene47566:intron | 45.0% | |
| TTAGACCGTATCTACAGGTG+AGG | + | chr4.3:25365223-25365242 | MS.gene47566:intron | 45.0% | |
| TTCGTCTGACACAGTCAACA+AGG | + | chr4.3:25361775-25361794 | MS.gene47566:CDS | 45.0% | |
| ! | AGGCTTTTGCAAGGCTTTAC+AGG | + | chr4.3:25365200-25365219 | MS.gene47566:CDS | 45.0% |
| ! | CTGTAACAGAGGCTTTTGCA+AGG | + | chr4.3:25365191-25365210 | MS.gene47566:CDS | 45.0% |
| AAGAAGAAGCAAGGTCGTGG+TGG | + | chr4.3:25361260-25361279 | MS.gene47566:CDS | 50.0% | |
| ACTTGCCTCAAGACCACAAG+TGG | - | chr4.3:25365620-25365639 | None:intergenic | 50.0% | |
| AGCCCTTAGCCCACTAATGA+AGG | + | chr4.3:25363734-25363753 | MS.gene47566:CDS | 50.0% | |
| AGGCATTCATTAGAGCCTCC+TGG | - | chr4.3:25366359-25366378 | None:intergenic | 50.0% | |
| ATCTTGATGCCAGTCTTCCC+TGG | + | chr4.3:25365535-25365554 | MS.gene47566:intron | 50.0% | |
| ATGAAATGCCTGCGCCTAAC+TGG | + | chr4.3:25362376-25362395 | MS.gene47566:intron | 50.0% | |
| CCACAAGTAGCTAGCCAGTT+AGG | - | chr4.3:25362393-25362412 | None:intergenic | 50.0% | |
| CTTGATCCAGCAACCACTTG+TGG | + | chr4.3:25365604-25365623 | MS.gene47566:CDS | 50.0% | |
| GAGCTCAGAAAACAGCTCGA+AGG | + | chr4.3:25362742-25362761 | MS.gene47566:CDS | 50.0% | |
| TCAAGACCACAAGTGGTTGC+TGG | - | chr4.3:25365613-25365632 | None:intergenic | 50.0% | |
| TCTTGATGCCAGTCTTCCCT+GGG | + | chr4.3:25365536-25365555 | MS.gene47566:intron | 50.0% | |
| TGCGGGCGACATATCTGATA+TGG | + | chr4.3:25365861-25365880 | MS.gene47566:CDS | 50.0% | |
| TTAGATGGCGTGCCTATCGT+AGG | + | chr4.3:25362277-25362296 | MS.gene47566:CDS | 50.0% | |
| ! | AGCAACCACTTGTGGTCTTG+AGG | + | chr4.3:25365612-25365631 | MS.gene47566:CDS | 50.0% |
| ! | CCTAACTGGCTAGCTACTTG+TGG | + | chr4.3:25362390-25362409 | MS.gene47566:intron | 50.0% |
| !! | CGAGCTGTTTTCTGAGCTCT+GGG | - | chr4.3:25362741-25362760 | None:intergenic | 50.0% |
| !! | TCGAGCTGTTTTCTGAGCTC+TGG | - | chr4.3:25362742-25362761 | None:intergenic | 50.0% |
| GACCGTATCTACAGGTGAGG+TGG | + | chr4.3:25365226-25365245 | MS.gene47566:intron | 55.0% | |
| GCGAAGAAGAAGCAAGGTCG+TGG | + | chr4.3:25361257-25361276 | MS.gene47566:CDS | 55.0% | |
| GGATTTGACGTAGCTGCCCA+GGG | - | chr4.3:25365555-25365574 | None:intergenic | 55.0% | |
| TCTTCTTCGCCACCACACGT+CGG | - | chr4.3:25361247-25361266 | None:intergenic | 55.0% | |
| ! | GTGGTGGCGAAGAAGAAGCA+AGG | + | chr4.3:25361251-25361270 | MS.gene47566:CDS | 55.0% |
| ACCACACGTCGGCCACAACA+AGG | - | chr4.3:25361236-25361255 | None:intergenic | 60.0% | |
| CGGATTTGACGTAGCTGCCC+AGG | - | chr4.3:25365556-25365575 | None:intergenic | 60.0% | |
| CGTCGGCCACAACAAGGTCT+TGG | - | chr4.3:25361230-25361249 | None:intergenic | 60.0% | |
| GTAGCTAGCCAGTTAGGCGC+AGG | - | chr4.3:25362387-25362406 | None:intergenic | 60.0% | |
| TGGGCGTGCAGTTGTTGCTC+TGG | + | chr4.3:25362050-25362069 | MS.gene47566:CDS | 60.0% | |
| TTGTTGTGGCCGACGTGTGG+TGG | + | chr4.3:25361235-25361254 | MS.gene47566:CDS | 60.0% | |
| ! | AAGCAAGGTCGTGGTGGTGC+CGG | + | chr4.3:25361266-25361285 | MS.gene47566:CDS | 60.0% |
| ! | ACCTTGTTGTGGCCGACGTG+TGG | + | chr4.3:25361232-25361251 | MS.gene47566:CDS | 60.0% |
| CGTAGCTGCCCAGGGAAGAC+TGG | - | chr4.3:25365547-25365566 | None:intergenic | 65.0% | |
| !! | GTCGTGGTGGTGCCGGTGAT+GGG | + | chr4.3:25361273-25361292 | MS.gene47566:CDS | 65.0% |
| !! | TGGAAGGTGGTGGTGGTGGG+AGG | + | chr4.3:25361189-25361208 | MS.gene47566:CDS | 65.0% |
| !! | GGTCGTGGTGGTGCCGGTGA+TGG | + | chr4.3:25361272-25361291 | MS.gene47566:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25361188 | 25366500 | 25361188 | ID=MS.gene47566 |
| chr4.3 | mRNA | 25361188 | 25366500 | 25361188 | ID=MS.gene47566.t1;Parent=MS.gene47566 |
| chr4.3 | exon | 25361188 | 25361403 | 25361188 | ID=MS.gene47566.t1.exon1;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25361188 | 25361403 | 25361188 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25361719 | 25361796 | 25361719 | ID=MS.gene47566.t1.exon2;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25361719 | 25361796 | 25361719 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25361973 | 25362093 | 25361973 | ID=MS.gene47566.t1.exon3;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25361973 | 25362093 | 25361973 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25362188 | 25362298 | 25362188 | ID=MS.gene47566.t1.exon4;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25362188 | 25362298 | 25362188 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25362697 | 25362811 | 25362697 | ID=MS.gene47566.t1.exon5;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25362697 | 25362811 | 25362697 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25363686 | 25363755 | 25363686 | ID=MS.gene47566.t1.exon6;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25363686 | 25363755 | 25363686 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25365160 | 25365239 | 25365160 | ID=MS.gene47566.t1.exon7;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25365160 | 25365239 | 25365160 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25365562 | 25365637 | 25365562 | ID=MS.gene47566.t1.exon8;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25365562 | 25365637 | 25365562 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25365736 | 25365882 | 25365736 | ID=MS.gene47566.t1.exon9;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25365736 | 25365882 | 25365736 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25365981 | 25366049 | 25365981 | ID=MS.gene47566.t1.exon10;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25365981 | 25366049 | 25365981 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| chr4.3 | exon | 25366360 | 25366500 | 25366360 | ID=MS.gene47566.t1.exon11;Parent=MS.gene47566.t1 |
| chr4.3 | CDS | 25366360 | 25366500 | 25366360 | ID=cds.MS.gene47566.t1;Parent=MS.gene47566.t1 |
| Gene Sequence |
| Protein sequence |
