Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47841.t1 | XP_003604643.1 | 89.9 | 398 | 39 | 1 | 1 | 397 | 109 | 506 | 2.50E-216 | 761.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47841.t1 | B8AVF0 | 53.7 | 417 | 156 | 5 | 1 | 390 | 102 | 508 | 2.2e-128 | 460.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47841.t1 | A8TVQ0 | 89.9 | 398 | 39 | 1 | 1 | 397 | 109 | 506 | 1.8e-216 | 761.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04932 | MS.gene47841 | 0.857936 | 1.16E-62 | -1.69E-46 |
MS.gene049549 | MS.gene47841 | 0.827956 | 1.17E-54 | -1.69E-46 |
MS.gene051131 | MS.gene47841 | 0.8099 | 1.51E-50 | -1.69E-46 |
MS.gene05240 | MS.gene47841 | 0.821068 | 4.91E-53 | -1.69E-46 |
MS.gene05244 | MS.gene47841 | 0.814554 | 1.45E-51 | -1.69E-46 |
MS.gene052606 | MS.gene47841 | 0.812473 | 4.17E-51 | -1.69E-46 |
MS.gene052702 | MS.gene47841 | 0.852415 | 4.69E-61 | -1.69E-46 |
MS.gene052705 | MS.gene47841 | 0.811967 | 5.37E-51 | -1.69E-46 |
MS.gene052706 | MS.gene47841 | 0.822084 | 2.86E-53 | -1.69E-46 |
MS.gene054107 | MS.gene47841 | -0.805844 | 1.10E-49 | -1.69E-46 |
MS.gene054181 | MS.gene47841 | 0.815391 | 9.47E-52 | -1.69E-46 |
MS.gene054277 | MS.gene47841 | 0.814256 | 1.69E-51 | -1.69E-46 |
MS.gene054742 | MS.gene47841 | 0.820082 | 8.28E-53 | -1.69E-46 |
MS.gene054884 | MS.gene47841 | 0.831246 | 1.86E-55 | -1.69E-46 |
MS.gene056590 | MS.gene47841 | 0.860704 | 1.72E-63 | -1.69E-46 |
MS.gene056591 | MS.gene47841 | 0.858715 | 6.81E-63 | -1.69E-46 |
MS.gene056688 | MS.gene47841 | 0.845351 | 4.29E-59 | -1.69E-46 |
MS.gene056694 | MS.gene47841 | 0.833857 | 4.19E-56 | -1.69E-46 |
MS.gene056697 | MS.gene47841 | 0.864221 | 1.42E-64 | -1.69E-46 |
MS.gene056856 | MS.gene47841 | 0.825974 | 3.50E-54 | -1.69E-46 |
MS.gene056920 | MS.gene47841 | 0.823341 | 1.46E-53 | -1.69E-46 |
MS.gene057261 | MS.gene47841 | 0.84817 | 7.27E-60 | -1.69E-46 |
MS.gene057544 | MS.gene47841 | 0.820809 | 5.64E-53 | -1.69E-46 |
MS.gene057548 | MS.gene47841 | 0.802139 | 6.47E-49 | -1.69E-46 |
MS.gene057768 | MS.gene47841 | 0.805177 | 1.51E-49 | -1.69E-46 |
MS.gene058381 | MS.gene47841 | 0.800621 | 1.32E-48 | -1.69E-46 |
MS.gene058603 | MS.gene47841 | 0.802295 | 6.00E-49 | -1.69E-46 |
MS.gene05926 | MS.gene47841 | 0.826766 | 2.27E-54 | -1.69E-46 |
MS.gene059955 | MS.gene47841 | 0.823315 | 1.48E-53 | -1.69E-46 |
MS.gene060087 | MS.gene47841 | 0.836269 | 1.03E-56 | -1.69E-46 |
MS.gene060405 | MS.gene47841 | 0.821434 | 4.05E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47841.t1 | MTR_4g015460 | 89.950 | 398 | 39 | 1 | 1 | 397 | 109 | 506 | 0.0 | 746 |
MS.gene47841.t1 | MTR_4g015420 | 81.472 | 394 | 69 | 3 | 1 | 391 | 132 | 524 | 0.0 | 659 |
MS.gene47841.t1 | MTR_4g066330 | 68.193 | 393 | 114 | 6 | 1 | 391 | 109 | 492 | 0.0 | 540 |
MS.gene47841.t1 | MTR_4g066280 | 65.903 | 393 | 123 | 7 | 1 | 391 | 109 | 492 | 0.0 | 526 |
MS.gene47841.t1 | MTR_2g043200 | 64.286 | 392 | 134 | 3 | 1 | 391 | 132 | 518 | 8.65e-180 | 510 |
MS.gene47841.t1 | MTR_2g098520 | 59.189 | 419 | 134 | 7 | 1 | 392 | 102 | 510 | 8.83e-173 | 492 |
MS.gene47841.t1 | MTR_2g098540 | 57.995 | 419 | 139 | 6 | 1 | 392 | 55 | 463 | 1.47e-168 | 480 |
MS.gene47841.t1 | MTR_2g098540 | 57.995 | 419 | 139 | 6 | 1 | 392 | 99 | 507 | 1.92e-168 | 481 |
MS.gene47841.t1 | MTR_2g098790 | 57.416 | 418 | 141 | 6 | 1 | 391 | 106 | 513 | 2.99e-167 | 478 |
MS.gene47841.t1 | MTR_4g066340 | 56.905 | 420 | 144 | 6 | 1 | 393 | 31 | 440 | 1.40e-166 | 474 |
MS.gene47841.t1 | MTR_3g028720 | 57.895 | 418 | 139 | 7 | 1 | 391 | 106 | 513 | 5.71e-162 | 466 |
MS.gene47841.t1 | MTR_4g066210 | 54.306 | 418 | 154 | 5 | 1 | 391 | 111 | 518 | 4.15e-161 | 463 |
MS.gene47841.t1 | MTR_4g066580 | 56.938 | 418 | 143 | 7 | 1 | 391 | 107 | 514 | 4.13e-160 | 461 |
MS.gene47841.t1 | MTR_4g066240 | 53.095 | 420 | 160 | 5 | 1 | 393 | 104 | 513 | 1.15e-158 | 456 |
MS.gene47841.t1 | MTR_6g078450 | 54.028 | 422 | 157 | 4 | 1 | 395 | 104 | 515 | 2.88e-158 | 456 |
MS.gene47841.t1 | MTR_6g078330 | 54.028 | 422 | 157 | 5 | 1 | 395 | 1 | 412 | 5.19e-158 | 451 |
MS.gene47841.t1 | MTR_4g066240 | 52.969 | 421 | 160 | 6 | 1 | 393 | 104 | 514 | 7.09e-157 | 452 |
MS.gene47841.t1 | MTR_6g078330 | 54.028 | 422 | 157 | 5 | 1 | 395 | 105 | 516 | 1.04e-156 | 452 |
MS.gene47841.t1 | MTR_4g066640 | 55.263 | 418 | 152 | 8 | 1 | 393 | 107 | 514 | 1.23e-155 | 449 |
MS.gene47841.t1 | MTR_4g066590 | 55.396 | 417 | 149 | 6 | 1 | 390 | 101 | 507 | 1.32e-154 | 446 |
MS.gene47841.t1 | MTR_4g066630 | 54.916 | 417 | 151 | 6 | 1 | 390 | 107 | 513 | 9.33e-153 | 442 |
MS.gene47841.t1 | MTR_6g078380 | 54.739 | 422 | 155 | 4 | 1 | 395 | 104 | 516 | 9.07e-150 | 434 |
MS.gene47841.t1 | MTR_5g071520 | 53.132 | 431 | 150 | 6 | 1 | 392 | 107 | 524 | 7.09e-146 | 424 |
MS.gene47841.t1 | MTR_6g078330 | 51.707 | 410 | 159 | 6 | 13 | 395 | 15 | 412 | 1.65e-144 | 417 |
MS.gene47841.t1 | MTR_4g023000 | 49.640 | 417 | 169 | 7 | 1 | 391 | 92 | 493 | 1.49e-137 | 402 |
MS.gene47841.t1 | MTR_3g026280 | 49.881 | 419 | 168 | 6 | 1 | 392 | 90 | 493 | 3.54e-136 | 399 |
MS.gene47841.t1 | MTR_3g028720 | 56.868 | 364 | 120 | 7 | 1 | 337 | 106 | 459 | 2.65e-132 | 387 |
MS.gene47841.t1 | MTR_3g026400 | 47.837 | 416 | 178 | 6 | 1 | 390 | 74 | 476 | 3.88e-132 | 388 |
MS.gene47841.t1 | MTR_3g026400 | 47.837 | 416 | 178 | 6 | 1 | 390 | 105 | 507 | 7.08e-132 | 388 |
MS.gene47841.t1 | MTR_6g078450 | 53.022 | 364 | 134 | 4 | 1 | 337 | 104 | 457 | 1.04e-127 | 375 |
MS.gene47841.t1 | MTR_3g026620 | 47.596 | 416 | 179 | 6 | 1 | 390 | 106 | 508 | 3.10e-123 | 366 |
MS.gene47841.t1 | MTR_4g066630 | 52.893 | 363 | 134 | 6 | 1 | 336 | 107 | 459 | 1.83e-122 | 362 |
MS.gene47841.t1 | MTR_4g083000 | 43.571 | 420 | 196 | 5 | 1 | 391 | 1 | 408 | 1.47e-119 | 353 |
MS.gene47841.t1 | MTR_4g083000 | 43.571 | 420 | 196 | 5 | 1 | 391 | 95 | 502 | 1.66e-118 | 354 |
MS.gene47841.t1 | MTR_5g044000 | 44.575 | 424 | 185 | 8 | 1 | 390 | 113 | 520 | 9.16e-117 | 350 |
MS.gene47841.t1 | MTR_3g028720 | 55.455 | 330 | 110 | 7 | 1 | 303 | 106 | 425 | 8.54e-113 | 337 |
MS.gene47841.t1 | MTR_4g066580 | 54.545 | 330 | 113 | 7 | 1 | 303 | 107 | 426 | 5.07e-111 | 332 |
MS.gene47841.t1 | MTR_4g081530 | 42.654 | 422 | 198 | 7 | 1 | 391 | 91 | 499 | 5.65e-111 | 335 |
MS.gene47841.t1 | MTR_4g066240 | 48.193 | 332 | 135 | 5 | 1 | 305 | 104 | 425 | 2.02e-106 | 320 |
MS.gene47841.t1 | MTR_4g066630 | 51.829 | 328 | 121 | 6 | 1 | 301 | 107 | 424 | 3.08e-104 | 315 |
MS.gene47841.t1 | MTR_2g022760 | 40.952 | 420 | 212 | 7 | 1 | 394 | 1 | 410 | 1.74e-103 | 312 |
MS.gene47841.t1 | MTR_3g033810 | 41.176 | 408 | 211 | 7 | 1 | 391 | 88 | 483 | 1.99e-103 | 315 |
MS.gene47841.t1 | MTR_3g033790 | 41.667 | 408 | 208 | 7 | 1 | 391 | 86 | 480 | 3.26e-103 | 314 |
MS.gene47841.t1 | MTR_0110s0040 | 42.654 | 422 | 197 | 9 | 1 | 394 | 110 | 514 | 8.11e-103 | 314 |
MS.gene47841.t1 | MTR_2g022760 | 40.952 | 420 | 212 | 7 | 1 | 394 | 104 | 513 | 3.28e-102 | 312 |
MS.gene47841.t1 | MTR_7g033860 | 39.467 | 413 | 216 | 7 | 1 | 393 | 116 | 514 | 1.26e-101 | 311 |
MS.gene47841.t1 | MTR_4g131810 | 39.234 | 418 | 216 | 8 | 1 | 390 | 96 | 503 | 2.66e-100 | 308 |
MS.gene47841.t1 | MTR_0110s0030 | 40.952 | 420 | 207 | 8 | 1 | 394 | 110 | 514 | 4.69e-100 | 307 |
MS.gene47841.t1 | MTR_2g079580 | 41.007 | 417 | 207 | 9 | 1 | 390 | 99 | 503 | 1.01e-98 | 304 |
MS.gene47841.t1 | MTR_2g079550 | 41.007 | 417 | 207 | 8 | 1 | 390 | 97 | 501 | 4.11e-98 | 302 |
MS.gene47841.t1 | MTR_2g022710 | 38.208 | 424 | 225 | 8 | 1 | 397 | 1 | 414 | 9.49e-98 | 298 |
MS.gene47841.t1 | MTR_2g022710 | 38.208 | 424 | 225 | 8 | 1 | 397 | 102 | 515 | 2.27e-96 | 297 |
MS.gene47841.t1 | MTR_4g067040 | 50.633 | 316 | 119 | 6 | 1 | 289 | 102 | 407 | 3.94e-96 | 293 |
MS.gene47841.t1 | MTR_3g028720 | 55.894 | 263 | 86 | 4 | 1 | 237 | 106 | 364 | 2.80e-94 | 288 |
MS.gene47841.t1 | MTR_4g131800 | 40.000 | 420 | 216 | 7 | 1 | 394 | 583 | 992 | 8.20e-94 | 303 |
MS.gene47841.t1 | MTR_7g051610 | 40.338 | 414 | 211 | 6 | 1 | 393 | 136 | 534 | 1.73e-92 | 288 |
MS.gene47841.t1 | MTR_0108s0030 | 37.981 | 416 | 200 | 8 | 1 | 393 | 71 | 451 | 3.73e-92 | 285 |
MS.gene47841.t1 | MTR_7g051650 | 39.806 | 412 | 211 | 9 | 1 | 390 | 132 | 528 | 4.19e-92 | 287 |
MS.gene47841.t1 | MTR_7g051650 | 39.806 | 412 | 211 | 9 | 1 | 390 | 136 | 532 | 5.47e-92 | 286 |
MS.gene47841.t1 | MTR_7g051510 | 40.338 | 414 | 211 | 6 | 1 | 393 | 136 | 534 | 3.67e-91 | 285 |
MS.gene47841.t1 | MTR_4g067040 | 55.686 | 255 | 87 | 3 | 1 | 229 | 102 | 356 | 7.08e-91 | 279 |
MS.gene47841.t1 | MTR_4g016920 | 38.425 | 419 | 210 | 7 | 1 | 392 | 1 | 398 | 1.07e-90 | 280 |
MS.gene47841.t1 | MTR_7g068900 | 39.192 | 421 | 203 | 8 | 1 | 391 | 22 | 419 | 1.68e-90 | 281 |
MS.gene47841.t1 | MTR_7g068910 | 38.425 | 419 | 210 | 7 | 1 | 392 | 98 | 495 | 5.74e-90 | 281 |
MS.gene47841.t1 | MTR_7g068910 | 38.425 | 419 | 210 | 7 | 1 | 392 | 108 | 505 | 6.52e-90 | 281 |
MS.gene47841.t1 | MTR_4g066640 | 56.275 | 247 | 84 | 4 | 1 | 223 | 107 | 353 | 8.57e-90 | 276 |
MS.gene47841.t1 | MTR_4g016920 | 38.425 | 419 | 210 | 7 | 1 | 392 | 94 | 491 | 1.97e-89 | 280 |
MS.gene47841.t1 | MTR_4g066630 | 54.118 | 255 | 91 | 3 | 1 | 229 | 107 | 361 | 2.43e-89 | 275 |
MS.gene47841.t1 | MTR_5g068740 | 36.792 | 424 | 215 | 8 | 1 | 394 | 92 | 492 | 3.24e-88 | 276 |
MS.gene47841.t1 | MTR_6g078330 | 51.779 | 253 | 96 | 2 | 1 | 227 | 105 | 357 | 1.05e-87 | 271 |
MS.gene47841.t1 | MTR_1g088610 | 37.857 | 420 | 209 | 8 | 1 | 391 | 92 | 488 | 2.65e-87 | 277 |
MS.gene47841.t1 | MTR_1g088610 | 39.167 | 120 | 66 | 2 | 276 | 394 | 503 | 616 | 2.48e-18 | 87.4 |
MS.gene47841.t1 | MTR_7g056747 | 37.981 | 416 | 209 | 7 | 1 | 395 | 15 | 402 | 1.60e-86 | 268 |
MS.gene47841.t1 | MTR_3g026400 | 51.004 | 249 | 95 | 3 | 1 | 224 | 105 | 351 | 1.40e-84 | 263 |
MS.gene47841.t1 | MTR_1g088630 | 35.697 | 423 | 196 | 10 | 1 | 394 | 60 | 435 | 7.83e-78 | 248 |
MS.gene47841.t1 | MTR_2g079580 | 39.939 | 328 | 159 | 8 | 1 | 301 | 99 | 415 | 1.82e-71 | 230 |
MS.gene47841.t1 | MTR_2g022710 | 35.813 | 363 | 198 | 6 | 1 | 337 | 102 | 455 | 4.55e-71 | 231 |
MS.gene47841.t1 | MTR_2g022710 | 35.813 | 363 | 198 | 6 | 1 | 337 | 102 | 455 | 9.58e-71 | 230 |
MS.gene47841.t1 | MTR_4g016920 | 44.358 | 257 | 115 | 3 | 1 | 231 | 1 | 255 | 1.19e-67 | 217 |
MS.gene47841.t1 | MTR_2g022710 | 37.003 | 327 | 171 | 6 | 1 | 301 | 102 | 419 | 6.78e-67 | 218 |
MS.gene47841.t1 | MTR_0110s0040 | 40.753 | 292 | 143 | 5 | 1 | 264 | 110 | 399 | 1.80e-64 | 211 |
MS.gene47841.t1 | MTR_2g022710 | 35.873 | 315 | 167 | 6 | 1 | 289 | 102 | 407 | 3.18e-61 | 203 |
MS.gene47841.t1 | MTR_2g022710 | 38.095 | 252 | 130 | 3 | 1 | 227 | 102 | 352 | 1.05e-54 | 186 |
MS.gene47841.t1 | MTR_1g088630 | 39.271 | 247 | 97 | 5 | 1 | 220 | 92 | 312 | 3.06e-51 | 176 |
MS.gene47841.t1 | MTR_1g088630 | 40.500 | 200 | 90 | 3 | 1 | 173 | 92 | 289 | 1.50e-42 | 151 |
MS.gene47841.t1 | MTR_0110s0020 | 40.000 | 160 | 70 | 2 | 1 | 136 | 110 | 267 | 3.67e-32 | 124 |
MS.gene47841.t1 | MTR_4g122980 | 25.592 | 422 | 214 | 11 | 2 | 395 | 188 | 537 | 2.46e-28 | 117 |
MS.gene47841.t1 | MTR_5g069350 | 41.259 | 143 | 44 | 5 | 259 | 391 | 76 | 188 | 2.31e-20 | 88.6 |
MS.gene47841.t1 | MTR_8g038650 | 40.000 | 100 | 60 | 0 | 138 | 237 | 62 | 161 | 1.76e-17 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47841.t1 | AT2G44480 | 44.153 | 419 | 198 | 4 | 1 | 393 | 1 | 409 | 4.53e-126 | 370 |
MS.gene47841.t1 | AT2G44480 | 44.153 | 419 | 198 | 4 | 1 | 393 | 103 | 511 | 7.25e-125 | 370 |
MS.gene47841.t1 | AT2G44480 | 44.153 | 419 | 198 | 4 | 1 | 393 | 134 | 542 | 1.98e-124 | 370 |
MS.gene47841.t1 | AT5G44640 | 46.506 | 415 | 179 | 7 | 8 | 394 | 106 | 505 | 1.89e-123 | 367 |
MS.gene47841.t1 | AT2G44450 | 46.265 | 415 | 181 | 6 | 7 | 394 | 105 | 504 | 7.58e-123 | 365 |
MS.gene47841.t1 | AT3G60130 | 45.024 | 422 | 183 | 8 | 1 | 391 | 46 | 449 | 2.54e-121 | 360 |
MS.gene47841.t1 | AT5G42260 | 46.135 | 414 | 180 | 7 | 1 | 386 | 99 | 497 | 5.78e-121 | 360 |
MS.gene47841.t1 | AT3G60130 | 45.024 | 422 | 183 | 8 | 1 | 391 | 98 | 501 | 3.23e-120 | 358 |
MS.gene47841.t1 | AT5G24550 | 45.843 | 421 | 193 | 8 | 1 | 393 | 99 | 512 | 4.70e-120 | 359 |
MS.gene47841.t1 | AT3G60120 | 43.675 | 419 | 201 | 5 | 1 | 392 | 81 | 491 | 1.13e-117 | 353 |
MS.gene47841.t1 | AT5G54570 | 43.705 | 421 | 193 | 7 | 1 | 390 | 1 | 408 | 2.29e-117 | 348 |
MS.gene47841.t1 | AT3G60140 | 44.893 | 421 | 192 | 8 | 1 | 391 | 93 | 503 | 3.14e-116 | 350 |
MS.gene47841.t1 | AT5G54570 | 43.705 | 421 | 193 | 7 | 1 | 390 | 98 | 505 | 4.20e-116 | 348 |
MS.gene47841.t1 | AT2G44490 | 41.608 | 423 | 210 | 6 | 1 | 394 | 82 | 496 | 6.18e-116 | 349 |
MS.gene47841.t1 | AT3G60130 | 43.780 | 418 | 183 | 7 | 1 | 391 | 46 | 438 | 9.67e-116 | 345 |
MS.gene47841.t1 | AT1G26560 | 44.762 | 420 | 190 | 8 | 1 | 390 | 99 | 506 | 2.56e-115 | 346 |
MS.gene47841.t1 | AT5G24540 | 43.943 | 421 | 201 | 7 | 1 | 393 | 99 | 512 | 6.86e-113 | 340 |
MS.gene47841.t1 | AT1G47600 | 43.099 | 413 | 199 | 6 | 1 | 390 | 110 | 509 | 2.16e-112 | 338 |
MS.gene47841.t1 | AT1G47600 | 43.099 | 413 | 198 | 7 | 1 | 390 | 110 | 508 | 4.78e-111 | 335 |
MS.gene47841.t1 | AT1G75940 | 42.755 | 421 | 203 | 6 | 1 | 390 | 104 | 517 | 6.39e-111 | 335 |
MS.gene47841.t1 | AT1G51470 | 43.341 | 413 | 198 | 6 | 1 | 390 | 110 | 509 | 1.25e-110 | 334 |
MS.gene47841.t1 | AT3G03640 | 42.518 | 421 | 203 | 6 | 1 | 391 | 102 | 513 | 1.11e-109 | 332 |
MS.gene47841.t1 | AT2G25630 | 43.405 | 417 | 178 | 8 | 1 | 390 | 98 | 483 | 2.68e-109 | 330 |
MS.gene47841.t1 | AT2G44460 | 44.630 | 419 | 195 | 6 | 1 | 391 | 96 | 505 | 8.72e-109 | 331 |
MS.gene47841.t1 | AT5G36890 | 44.030 | 402 | 196 | 7 | 8 | 391 | 90 | 480 | 1.52e-108 | 328 |
MS.gene47841.t1 | AT5G36890 | 44.030 | 402 | 196 | 7 | 8 | 391 | 90 | 480 | 1.85e-108 | 328 |
MS.gene47841.t1 | AT5G25980 | 42.823 | 418 | 202 | 8 | 1 | 391 | 116 | 523 | 3.36e-107 | 326 |
MS.gene47841.t1 | AT3G18080 | 43.365 | 422 | 193 | 9 | 1 | 393 | 106 | 510 | 1.12e-106 | 324 |
MS.gene47841.t1 | AT5G26000 | 41.866 | 418 | 205 | 7 | 1 | 390 | 104 | 511 | 1.18e-105 | 322 |
MS.gene47841.t1 | AT3G09260 | 41.330 | 421 | 208 | 6 | 1 | 392 | 102 | 512 | 3.74e-104 | 318 |
MS.gene47841.t1 | AT2G44470 | 41.289 | 419 | 208 | 9 | 1 | 390 | 96 | 505 | 4.17e-104 | 320 |
MS.gene47841.t1 | AT1G66280 | 42.823 | 418 | 201 | 7 | 1 | 390 | 103 | 510 | 1.73e-103 | 316 |
MS.gene47841.t1 | AT1G66270 | 41.866 | 418 | 205 | 6 | 1 | 390 | 103 | 510 | 1.37e-102 | 313 |
MS.gene47841.t1 | AT3G18070 | 42.080 | 423 | 197 | 10 | 1 | 394 | 97 | 500 | 5.51e-102 | 311 |
MS.gene47841.t1 | AT5G28510 | 40.566 | 424 | 208 | 6 | 1 | 390 | 106 | 519 | 2.97e-101 | 310 |
MS.gene47841.t1 | AT3G21370 | 41.232 | 422 | 208 | 8 | 1 | 391 | 100 | 512 | 4.64e-101 | 310 |
MS.gene47841.t1 | AT3G18070 | 41.844 | 423 | 192 | 10 | 1 | 394 | 97 | 494 | 5.54e-101 | 308 |
MS.gene47841.t1 | AT2G44450 | 44.022 | 368 | 164 | 6 | 54 | 394 | 1 | 353 | 5.74e-101 | 304 |
MS.gene47841.t1 | AT1G61820 | 40.476 | 420 | 213 | 8 | 1 | 393 | 98 | 507 | 1.46e-100 | 308 |
MS.gene47841.t1 | AT1G66270 | 41.627 | 418 | 204 | 7 | 1 | 390 | 103 | 508 | 2.74e-100 | 308 |
MS.gene47841.t1 | AT1G52400 | 40.618 | 421 | 210 | 8 | 1 | 391 | 106 | 516 | 3.35e-100 | 308 |
MS.gene47841.t1 | AT1G52400 | 40.618 | 421 | 210 | 8 | 1 | 391 | 106 | 516 | 3.35e-100 | 308 |
MS.gene47841.t1 | AT2G32860 | 38.876 | 427 | 219 | 7 | 1 | 396 | 162 | 577 | 2.45e-98 | 305 |
MS.gene47841.t1 | AT2G32860 | 38.642 | 427 | 219 | 8 | 1 | 396 | 162 | 576 | 1.01e-97 | 304 |
MS.gene47841.t1 | AT4G21760 | 39.573 | 422 | 214 | 9 | 1 | 396 | 121 | 527 | 8.68e-97 | 299 |
MS.gene47841.t1 | AT4G27830 | 38.849 | 417 | 207 | 8 | 1 | 390 | 1 | 396 | 9.31e-95 | 290 |
MS.gene47841.t1 | AT1G02850 | 38.095 | 420 | 207 | 10 | 1 | 391 | 91 | 486 | 1.71e-93 | 289 |
MS.gene47841.t1 | AT1G61810 | 39.762 | 420 | 216 | 8 | 1 | 393 | 1 | 410 | 2.13e-93 | 286 |
MS.gene47841.t1 | AT4G27830 | 38.849 | 417 | 207 | 8 | 1 | 390 | 89 | 484 | 2.87e-93 | 289 |
MS.gene47841.t1 | AT4G21760 | 38.717 | 421 | 209 | 9 | 1 | 396 | 121 | 517 | 1.91e-92 | 288 |
MS.gene47841.t1 | AT1G61810 | 39.762 | 420 | 216 | 8 | 1 | 393 | 101 | 510 | 2.73e-92 | 287 |
MS.gene47841.t1 | AT3G62750 | 38.480 | 408 | 213 | 8 | 1 | 390 | 1 | 388 | 8.63e-91 | 280 |
MS.gene47841.t1 | AT3G62750 | 38.480 | 408 | 213 | 8 | 1 | 390 | 1 | 388 | 8.63e-91 | 280 |
MS.gene47841.t1 | AT5G54570 | 40.599 | 367 | 175 | 6 | 1 | 337 | 98 | 451 | 3.31e-90 | 280 |
MS.gene47841.t1 | AT1G02850 | 36.117 | 443 | 207 | 10 | 1 | 391 | 91 | 509 | 5.98e-90 | 281 |
MS.gene47841.t1 | AT3G62750 | 38.235 | 408 | 214 | 8 | 1 | 390 | 86 | 473 | 1.46e-89 | 279 |
MS.gene47841.t1 | AT3G62750 | 38.235 | 408 | 214 | 8 | 1 | 390 | 112 | 499 | 2.42e-89 | 280 |
MS.gene47841.t1 | AT4G27820 | 37.410 | 417 | 214 | 8 | 1 | 390 | 1 | 397 | 2.70e-88 | 273 |
MS.gene47841.t1 | AT4G27820 | 37.410 | 417 | 214 | 8 | 1 | 390 | 1 | 397 | 2.70e-88 | 273 |
MS.gene47841.t1 | AT1G02850 | 36.036 | 444 | 207 | 11 | 1 | 391 | 91 | 510 | 3.11e-88 | 276 |
MS.gene47841.t1 | AT5G25980 | 41.436 | 362 | 177 | 6 | 1 | 337 | 116 | 467 | 8.64e-88 | 274 |
MS.gene47841.t1 | AT5G25980 | 41.436 | 362 | 177 | 6 | 1 | 337 | 116 | 467 | 8.64e-88 | 274 |
MS.gene47841.t1 | AT4G27820 | 37.410 | 417 | 214 | 8 | 1 | 390 | 86 | 482 | 3.94e-87 | 273 |
MS.gene47841.t1 | AT1G02850 | 36.993 | 419 | 186 | 10 | 1 | 391 | 91 | 459 | 1.92e-86 | 270 |
MS.gene47841.t1 | AT1G61810 | 40.050 | 397 | 202 | 7 | 1 | 370 | 101 | 488 | 2.13e-86 | 272 |
MS.gene47841.t1 | AT1G61820 | 39.572 | 374 | 190 | 7 | 47 | 393 | 4 | 368 | 8.57e-86 | 266 |
MS.gene47841.t1 | AT2G44460 | 42.935 | 368 | 173 | 6 | 52 | 391 | 1 | 359 | 8.88e-86 | 268 |
MS.gene47841.t1 | AT5G24540 | 41.047 | 363 | 180 | 6 | 1 | 336 | 99 | 454 | 1.67e-85 | 268 |
MS.gene47841.t1 | AT5G26000 | 39.945 | 363 | 182 | 5 | 1 | 337 | 104 | 456 | 4.77e-85 | 266 |
MS.gene47841.t1 | AT4G22100 | 37.709 | 419 | 217 | 7 | 1 | 393 | 85 | 485 | 1.38e-84 | 267 |
MS.gene47841.t1 | AT3G62740 | 35.593 | 413 | 222 | 8 | 1 | 390 | 87 | 478 | 7.30e-84 | 265 |
MS.gene47841.t1 | AT3G60140 | 43.939 | 330 | 146 | 7 | 1 | 301 | 93 | 412 | 6.03e-82 | 258 |
MS.gene47841.t1 | AT2G44470 | 38.356 | 365 | 186 | 7 | 1 | 336 | 96 | 450 | 1.68e-80 | 254 |
MS.gene47841.t1 | AT1G45191 | 36.277 | 419 | 213 | 10 | 1 | 391 | 92 | 484 | 8.64e-80 | 254 |
MS.gene47841.t1 | AT5G48375 | 40.548 | 365 | 159 | 9 | 1 | 355 | 95 | 411 | 2.08e-78 | 249 |
MS.gene47841.t1 | AT1G45191 | 35.646 | 418 | 228 | 8 | 1 | 391 | 92 | 495 | 1.13e-77 | 249 |
MS.gene47841.t1 | AT1G60090 | 35.731 | 417 | 222 | 8 | 1 | 391 | 87 | 483 | 1.56e-77 | 248 |
MS.gene47841.t1 | AT1G45191 | 35.646 | 418 | 228 | 8 | 1 | 391 | 104 | 507 | 1.66e-77 | 249 |
MS.gene47841.t1 | AT1G45191 | 35.697 | 423 | 216 | 8 | 1 | 391 | 92 | 490 | 6.60e-77 | 247 |
MS.gene47841.t1 | AT2G44480 | 42.160 | 287 | 154 | 3 | 109 | 393 | 29 | 305 | 1.22e-76 | 240 |
MS.gene47841.t1 | AT1G60090 | 34.491 | 432 | 214 | 10 | 1 | 391 | 87 | 490 | 1.12e-74 | 241 |
MS.gene47841.t1 | AT1G52400 | 38.630 | 365 | 185 | 7 | 1 | 336 | 106 | 460 | 1.24e-74 | 239 |
MS.gene47841.t1 | AT3G18070 | 40.000 | 345 | 163 | 8 | 79 | 394 | 94 | 423 | 9.77e-74 | 236 |
MS.gene47841.t1 | AT3G62750 | 37.079 | 356 | 187 | 7 | 1 | 339 | 112 | 447 | 5.15e-72 | 233 |
MS.gene47841.t1 | AT3G18070 | 42.955 | 291 | 146 | 7 | 109 | 394 | 36 | 311 | 6.13e-70 | 223 |
MS.gene47841.t1 | AT3G62740 | 36.047 | 344 | 181 | 7 | 1 | 320 | 87 | 415 | 3.81e-69 | 224 |
MS.gene47841.t1 | AT2G44480 | 46.087 | 230 | 99 | 2 | 1 | 205 | 134 | 363 | 8.50e-69 | 223 |
MS.gene47841.t1 | AT2G44470 | 43.083 | 253 | 117 | 4 | 1 | 226 | 96 | 348 | 2.11e-67 | 219 |
MS.gene47841.t1 | AT1G02850 | 35.043 | 351 | 161 | 7 | 1 | 301 | 91 | 424 | 1.40e-65 | 215 |
MS.gene47841.t1 | AT3G62750 | 42.510 | 247 | 123 | 4 | 1 | 230 | 86 | 330 | 3.01e-64 | 210 |
MS.gene47841.t1 | AT3G62750 | 42.510 | 247 | 123 | 4 | 1 | 230 | 86 | 330 | 3.01e-64 | 210 |
MS.gene47841.t1 | AT3G62750 | 42.510 | 247 | 123 | 4 | 1 | 230 | 112 | 356 | 2.70e-63 | 209 |
MS.gene47841.t1 | AT1G61810 | 37.195 | 328 | 170 | 7 | 1 | 301 | 101 | 419 | 1.10e-60 | 202 |
MS.gene47841.t1 | AT3G18070 | 41.434 | 251 | 118 | 4 | 1 | 226 | 97 | 343 | 3.86e-58 | 194 |
MS.gene47841.t1 | AT1G60270 | 38.047 | 297 | 145 | 7 | 1 | 268 | 1 | 287 | 9.73e-57 | 188 |
MS.gene47841.t1 | AT1G45191 | 39.841 | 251 | 124 | 3 | 1 | 226 | 92 | 340 | 4.46e-56 | 190 |
MS.gene47841.t1 | AT1G45191 | 39.841 | 251 | 124 | 3 | 1 | 226 | 92 | 340 | 5.08e-56 | 190 |
MS.gene47841.t1 | AT1G60270 | 38.047 | 297 | 145 | 7 | 1 | 268 | 88 | 374 | 1.52e-55 | 187 |
MS.gene47841.t1 | AT1G51490 | 37.993 | 279 | 141 | 7 | 1 | 254 | 85 | 356 | 5.86e-53 | 182 |
MS.gene47841.t1 | AT3G18070 | 36.220 | 254 | 121 | 6 | 79 | 303 | 94 | 335 | 2.92e-41 | 149 |
MS.gene47841.t1 | AT5G16580 | 32.990 | 291 | 155 | 6 | 79 | 347 | 27 | 299 | 2.17e-39 | 142 |
MS.gene47841.t1 | AT1G61810 | 38.308 | 201 | 98 | 3 | 1 | 176 | 101 | 300 | 8.23e-39 | 141 |
MS.gene47841.t1 | AT3G18070 | 39.698 | 199 | 103 | 5 | 109 | 302 | 36 | 222 | 1.37e-37 | 136 |
MS.gene47841.t1 | AT3G06510 | 25.231 | 432 | 237 | 12 | 2 | 395 | 165 | 548 | 2.34e-30 | 123 |
MS.gene47841.t1 | AT3G06510 | 25.829 | 422 | 213 | 12 | 2 | 395 | 165 | 514 | 5.51e-30 | 122 |
Find 92 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGAACATAATAGAATTAT+TGG | 0.142938 | 4.4:+85067251 | MS.gene47841:CDS |
GATATTTGCTTCCTGGAATT+TGG | 0.177328 | 4.4:+85065714 | MS.gene47841:CDS |
GAGCAATCTAAGAGTCTTAT+TGG | 0.216931 | 4.4:+85066162 | MS.gene47841:CDS |
ACCATTATCATAACAGAAAA+TGG | 0.263997 | 4.4:+85066625 | MS.gene47841:CDS |
GGGGAAGATCCCAATGAAAA+AGG | 0.264707 | 4.4:-85065138 | None:intergenic |
GCTTTGTCAGCGAGAATATT+AGG | 0.282531 | 4.4:+85065185 | MS.gene47841:CDS |
ATACTTTGCATGGTCCCTTT+TGG | 0.290939 | 4.4:+85067115 | MS.gene47841:CDS |
CAGGGTCAAAATGGTGTAAT+AGG | 0.298560 | 4.4:+85065870 | MS.gene47841:CDS |
ACGAAATATCAGGGTCAAAA+TGG | 0.301030 | 4.4:+85065861 | MS.gene47841:CDS |
CTTTGTGGATATTTGCTTCC+TGG | 0.303992 | 4.4:+85065707 | MS.gene47841:CDS |
TGTTTGTCCAAAAGGGATTC+AGG | 0.306903 | 4.4:+85066564 | MS.gene47841:CDS |
ATTGTTAATGTGGCTTTATC+AGG | 0.308851 | 4.4:+85066303 | MS.gene47841:CDS |
GACGGATACACTGTGCGTTT+TGG | 0.311280 | 4.4:+85067155 | MS.gene47841:CDS |
GACGCCCTTGATTTCATGTT+TGG | 0.312958 | 4.4:+85065960 | MS.gene47841:CDS |
AGTAGGTCCTGAATCCCTTT+TGG | 0.348435 | 4.4:-85066571 | None:intergenic |
CAAGCCTTACAAGATGATTA+TGG | 0.348583 | 4.4:+85065160 | MS.gene47841:CDS |
TCTAATGGGTCAGTTGAGTA+TGG | 0.348923 | 4.4:-85065921 | None:intergenic |
TGGCTATATGTTTGTCCAAA+AGG | 0.350579 | 4.4:+85066556 | MS.gene47841:CDS |
AATGTATAAAACGAAATATC+AGG | 0.351551 | 4.4:+85065851 | MS.gene47841:CDS |
ATAATCATCTTGTAAGGCTT+GGG | 0.354884 | 4.4:-85065158 | None:intergenic |
ATCGATGAGCTACTTAATAA+TGG | 0.365239 | 4.4:+85065007 | MS.gene47841:CDS |
AGCTCTCTGCCCGATGGTTT+AGG | 0.372347 | 4.4:+85067222 | MS.gene47841:CDS |
TTGTAAAATCTAATTCCGTC+TGG | 0.379933 | 4.4:-85064977 | None:intergenic |
CAATATCCTTGGCCAAGATA+TGG | 0.382965 | 4.4:-85064833 | None:intergenic |
TCTGCAGCGGGCGGCGCCGA+CGG | 0.383995 | 4.4:+85066261 | MS.gene47841:CDS |
AGGCAAGGTGTGAATGTAAA+AGG | 0.387936 | 4.4:+85067092 | MS.gene47841:intron |
ACATAAGACACCATGCTTGC+TGG | 0.388660 | 4.4:-85066111 | None:intergenic |
CTATTACTTGGCAATATCCT+TGG | 0.390771 | 4.4:-85064844 | None:intergenic |
TTACTTTGTCTCCAAATTCC+AGG | 0.398270 | 4.4:-85065725 | None:intergenic |
GCTGCAGAATGTAGAGGAAT+TGG | 0.402462 | 4.4:-85066246 | None:intergenic |
TCCATTCAAAGTTGTCCAAA+AGG | 0.405927 | 4.4:-85067130 | None:intergenic |
GTATCCATGAGCGCCTCTTC+GGG | 0.415324 | 4.4:-85066901 | None:intergenic |
CATACAGATTCTCCATATCT+TGG | 0.418726 | 4.4:+85064821 | MS.gene47841:CDS |
CATAATCATCTTGTAAGGCT+TGG | 0.430388 | 4.4:-85065159 | None:intergenic |
AGTATCCATGAGCGCCTCTT+CGG | 0.431108 | 4.4:-85066902 | None:intergenic |
GGCTATATGTTTGTCCAAAA+GGG | 0.435266 | 4.4:+85066557 | MS.gene47841:CDS |
AACCATCGGGCAGAGAGCTT+AGG | 0.440435 | 4.4:-85067218 | None:intergenic |
GATTGCTCTTGAGTGAACTT+TGG | 0.449878 | 4.4:-85066147 | None:intergenic |
TTGGAGACAAAGTAAAGCAT+TGG | 0.451185 | 4.4:+85065733 | MS.gene47841:CDS |
TGGAGACAAAGTAAAGCATT+GGG | 0.453879 | 4.4:+85065734 | MS.gene47841:CDS |
ACCATCGGGCAGAGAGCTTA+GGG | 0.457955 | 4.4:-85067217 | None:intergenic |
TTTATACAACCACTGACAAC+AGG | 0.469475 | 4.4:+85066081 | MS.gene47841:CDS |
CAAAATGGTGTAATAGGCAT+TGG | 0.471411 | 4.4:+85065876 | MS.gene47841:CDS |
ACCATCCAAACATGAAATCA+AGG | 0.473106 | 4.4:-85065965 | None:intergenic |
AGCAAGCATGGTGTCTTATG+TGG | 0.473776 | 4.4:+85066113 | MS.gene47841:CDS |
ATGACAGATGTGAATAAAGA+AGG | 0.474887 | 4.4:+85066435 | MS.gene47841:intron |
AGCAATCTAAGAGTCTTATT+GGG | 0.478362 | 4.4:+85066163 | MS.gene47841:CDS |
GCCTCCATAATCATCTTGTA+AGG | 0.480473 | 4.4:-85065164 | None:intergenic |
ACATGAAATCAAGGGCGTCT+TGG | 0.480862 | 4.4:-85065956 | None:intergenic |
ACACTTTGAGTACATCAGAT+TGG | 0.486476 | 4.4:+85065781 | MS.gene47841:CDS |
GCATTGGATTAAACTCTCAC+TGG | 0.490284 | 4.4:+85065892 | MS.gene47841:CDS |
CCATTCAAAGTTGTCCAAAA+GGG | 0.499789 | 4.4:-85067129 | None:intergenic |
ATCACCCGAAGAGGCGCTCA+TGG | 0.501395 | 4.4:+85066897 | MS.gene47841:CDS |
CCCTTGATTTCATGTTTGGA+TGG | 0.504970 | 4.4:+85065964 | MS.gene47841:CDS |
TGTAAAATCTAATTCCGTCT+GGG | 0.505528 | 4.4:-85064976 | None:intergenic |
AGGAATTGGTTTCGTTGCAT+TGG | 0.510612 | 4.4:-85066232 | None:intergenic |
GTACTCAAAGTGTAAGAGAA+TGG | 0.519200 | 4.4:-85065771 | None:intergenic |
GACAACTTTGAATGGAATGA+CGG | 0.527539 | 4.4:+85067137 | MS.gene47841:CDS |
CATCTGCATGAGCAAGAAGT+TGG | 0.530133 | 4.4:-85065821 | None:intergenic |
AATATGTGCAGGCTGCAACT+TGG | 0.539391 | 4.4:+85066536 | MS.gene47841:intron |
AAGAAACTTCCTAAACCATC+GGG | 0.539660 | 4.4:-85067231 | None:intergenic |
CAAGAAACTTCCTAAACCAT+CGG | 0.543501 | 4.4:-85067232 | None:intergenic |
ATGCAGAAGGAAAACTAAGT+GGG | 0.545587 | 4.4:+85064945 | MS.gene47841:intron |
GCCTCTTCGGGTGATAGTGT+TGG | 0.552813 | 4.4:-85066889 | None:intergenic |
TTTCCTTTGTGTACAACAGT+AGG | 0.554600 | 4.4:-85066588 | None:intergenic |
AATAAAGAAGGGATATACAT+TGG | 0.556345 | 4.4:+85066447 | MS.gene47841:CDS |
GAAATCAAGGGCGTCTTGGA+CGG | 0.557749 | 4.4:-85065952 | None:intergenic |
GAAGTTGGTTGTGTGTTGAC+TGG | 0.560031 | 4.4:-85065806 | None:intergenic |
GATTCTCCATATCTTGGCCA+AGG | 0.571513 | 4.4:+85064827 | MS.gene47841:CDS |
ATTCCTCTACATTCTGCAGC+GGG | 0.574502 | 4.4:+85066249 | MS.gene47841:CDS |
TGACAGATGTGAATAAAGAA+GGG | 0.575495 | 4.4:+85066436 | MS.gene47841:intron |
ATGTATAAAACGAAATATCA+GGG | 0.576545 | 4.4:+85065852 | MS.gene47841:CDS |
AGGAGAGTATCCAGCAAGCA+TGG | 0.588296 | 4.4:+85066101 | MS.gene47841:CDS |
TATGCAGAAGGAAAACTAAG+TGG | 0.588404 | 4.4:+85064944 | MS.gene47841:intron |
AGGGATATACATTGGACCAT+GGG | 0.596300 | 4.4:+85066455 | MS.gene47841:CDS |
GGATACTCTCCTGTTGTCAG+TGG | 0.601924 | 4.4:-85066090 | None:intergenic |
GCAAGCATGGTGTCTTATGT+GGG | 0.610839 | 4.4:+85066114 | MS.gene47841:CDS |
TGCAGAAGGAAAACTAAGTG+GGG | 0.612476 | 4.4:+85064946 | MS.gene47841:intron |
TAATCATCTTGTAAGGCTTG+GGG | 0.615173 | 4.4:-85065157 | None:intergenic |
ACCCTAAGCTCTCTGCCCGA+TGG | 0.617320 | 4.4:+85067216 | MS.gene47841:CDS |
AAGGGATATACATTGGACCA+TGG | 0.619344 | 4.4:+85066454 | MS.gene47841:CDS |
ATGTAAAAGGATACTTTGCA+TGG | 0.622027 | 4.4:+85067105 | MS.gene47841:CDS |
CCGCCCGCTGCAGAATGTAG+AGG | 0.622346 | 4.4:-85066252 | None:intergenic |
TCCAACACTATCACCCGAAG+AGG | 0.623179 | 4.4:+85066888 | MS.gene47841:CDS |
CCTCTACATTCTGCAGCGGG+CGG | 0.632639 | 4.4:+85066252 | MS.gene47841:CDS |
GCCTTACAAGATGATTATGG+AGG | 0.632737 | 4.4:+85065163 | MS.gene47841:CDS |
AATTCCTCTACATTCTGCAG+CGG | 0.640213 | 4.4:+85066248 | MS.gene47841:CDS |
CCATCCAAACATGAAATCAA+GGG | 0.640294 | 4.4:-85065964 | None:intergenic |
GAAAACACTATTAACGCCGT+CGG | 0.643210 | 4.4:-85066277 | None:intergenic |
TGCATTGGCAGCATACATGC+TGG | 0.650774 | 4.4:-85066217 | None:intergenic |
GGACCTACTGTTGTACACAA+AGG | 0.659998 | 4.4:+85066585 | MS.gene47841:CDS |
GCAGAAGGAAAACTAAGTGG+GGG | 0.675074 | 4.4:+85064947 | MS.gene47841:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCATAATAATATAAATTGA+TGG | + | chr4.4:85065082-85065101 | MS.gene47841:intron | 10.0% |
!! | TTCTAATAAATTTAAATCAT+AGG | + | chr4.4:85066847-85066866 | MS.gene47841:intron | 10.0% |
!!! | TTGACTATATTATTATTTTT+TGG | + | chr4.4:85067057-85067076 | MS.gene47841:intron | 10.0% |
!! | AAATAATTTATGTCAAACAA+GGG | - | chr4.4:85066403-85066422 | None:intergenic | 15.0% |
!! | ATTCAAGAAATAATAAATTG+AGG | + | chr4.4:85065610-85065629 | MS.gene47841:intron | 15.0% |
!! | GTAATAGAAAATGTTTAATT+TGG | + | chr4.4:85064860-85064879 | MS.gene47841:intron | 15.0% |
!! | TATGATATACTAATAAAGTA+TGG | - | chr4.4:85065047-85065066 | None:intergenic | 15.0% |
!!! | ATTAAACATTTTCTATTACT+TGG | - | chr4.4:85064859-85064878 | None:intergenic | 15.0% |
!!! | ATTTTGATTTAAGTAAATAG+AGG | - | chr4.4:85066988-85067007 | None:intergenic | 15.0% |
!!! | TTTTGATTTAAGTAAATAGA+GGG | - | chr4.4:85066987-85067006 | None:intergenic | 15.0% |
!! | AATGTATAAAACGAAATATC+AGG | + | chr4.4:85065851-85065870 | MS.gene47841:CDS | 20.0% |
!! | ATGTATAAAACGAAATATCA+GGG | + | chr4.4:85065852-85065871 | MS.gene47841:CDS | 20.0% |
!! | ATTCTAATGTTAGTTAGTTA+TGG | - | chr4.4:85065564-85065583 | None:intergenic | 20.0% |
!! | CTTGAACATAATAGAATTAT+TGG | + | chr4.4:85067251-85067270 | MS.gene47841:CDS | 20.0% |
!! | GAAATAATTTATGTCAAACA+AGG | - | chr4.4:85066404-85066423 | None:intergenic | 20.0% |
!! | TGTTTGACATAAATTATTTC+TGG | + | chr4.4:85066404-85066423 | MS.gene47841:intron | 20.0% |
!!! | AATTTTATTTATCTGTTTGC+AGG | + | chr4.4:85066058-85066077 | MS.gene47841:intron | 20.0% |
!!! | TATATGCAGAAAAGATTTTA+AGG | + | chr4.4:85065683-85065702 | MS.gene47841:intron | 20.0% |
!!! | TGTTTTCAAAATTGTTAATG+TGG | + | chr4.4:85066293-85066312 | MS.gene47841:CDS | 20.0% |
! | AATAAAGAAGGGATATACAT+TGG | + | chr4.4:85066447-85066466 | MS.gene47841:CDS | 25.0% |
! | AATAACTAAACAATATGTGC+AGG | + | chr4.4:85066525-85066544 | MS.gene47841:intron | 25.0% |
! | ACCATTATCATAACAGAAAA+TGG | + | chr4.4:85066625-85066644 | MS.gene47841:CDS | 25.0% |
! | ATAAATCCAACTATGTTTGT+TGG | - | chr4.4:85065541-85065560 | None:intergenic | 25.0% |
! | ATACATTGTGAGAGAATATT+AGG | - | chr4.4:85066783-85066802 | None:intergenic | 25.0% |
! | GTTTATAAGACACTGAAAAA+AGG | - | chr4.4:85066814-85066833 | None:intergenic | 25.0% |
! | TAACTAACTAGTTAGTTAGT+TGG | - | chr4.4:85065498-85065517 | None:intergenic | 25.0% |
!! | ACCATTTTCTGTTATGATAA+TGG | - | chr4.4:85066629-85066648 | None:intergenic | 25.0% |
!! | ATTATCTTTTATCTGCAATG+AGG | + | chr4.4:85066956-85066975 | MS.gene47841:CDS | 25.0% |
!! | ATTGGGTCATATGATTTTAT+TGG | + | chr4.4:85066180-85066199 | MS.gene47841:CDS | 25.0% |
!!! | AAAAGATTTTAAGGACTTTG+TGG | + | chr4.4:85065692-85065711 | MS.gene47841:CDS | 25.0% |
!!! | TTTTCTGTTATGATAATGGT+AGG | - | chr4.4:85066625-85066644 | None:intergenic | 25.0% |
!!! | TTTTTTGGTTTTTTGTGTGA+AGG | + | chr4.4:85067072-85067091 | MS.gene47841:intron | 25.0% |
AACTCTAACAAATATGCAGA+AGG | + | chr4.4:85064932-85064951 | MS.gene47841:intron | 30.0% | |
ATAATCATCTTGTAAGGCTT+GGG | - | chr4.4:85065161-85065180 | None:intergenic | 30.0% | |
ATCGATGAGCTACTTAATAA+TGG | + | chr4.4:85065007-85065026 | MS.gene47841:CDS | 30.0% | |
ATGACAGATGTGAATAAAGA+AGG | + | chr4.4:85066435-85066454 | MS.gene47841:intron | 30.0% | |
ATGTAAAAGGATACTTTGCA+TGG | + | chr4.4:85067105-85067124 | MS.gene47841:CDS | 30.0% | |
ATTGATGGAATTATTGATCC+AGG | + | chr4.4:85065097-85065116 | MS.gene47841:intron | 30.0% | |
GTTAGAGTTGTTAATGCATA+TGG | - | chr4.4:85064921-85064940 | None:intergenic | 30.0% | |
TGACAGATGTGAATAAAGAA+GGG | + | chr4.4:85066436-85066455 | MS.gene47841:intron | 30.0% | |
TGATTTATGCCATCTTCATT+AGG | - | chr4.4:85066351-85066370 | None:intergenic | 30.0% | |
TGTAAAATCTAATTCCGTCT+GGG | - | chr4.4:85064979-85064998 | None:intergenic | 30.0% | |
TGTAGAGATCATTCTAATCT+CGG | - | chr4.4:85065318-85065337 | None:intergenic | 30.0% | |
TTGTAAAATCTAATTCCGTC+TGG | - | chr4.4:85064980-85064999 | None:intergenic | 30.0% | |
! | CGAGAAAGATTAGAATGTTT+TGG | + | chr4.4:85065254-85065273 | MS.gene47841:intron | 30.0% |
!! | AGCAATCTAAGAGTCTTATT+GGG | + | chr4.4:85066163-85066182 | MS.gene47841:CDS | 30.0% |
!! | ATATGTGACCCTTTTTCATT+GGG | + | chr4.4:85065129-85065148 | MS.gene47841:CDS | 30.0% |
!! | ATTGTTAATGTGGCTTTATC+AGG | + | chr4.4:85066303-85066322 | MS.gene47841:CDS | 30.0% |
AACCAACCAACAAACATAGT+TGG | + | chr4.4:85065532-85065551 | MS.gene47841:intron | 35.0% | |
AAGAAACTTCCTAAACCATC+GGG | - | chr4.4:85067234-85067253 | None:intergenic | 35.0% | |
ACACTTTGAGTACATCAGAT+TGG | + | chr4.4:85065781-85065800 | MS.gene47841:CDS | 35.0% | |
ACCATCCAAACATGAAATCA+AGG | - | chr4.4:85065968-85065987 | None:intergenic | 35.0% | |
ACGAAATATCAGGGTCAAAA+TGG | + | chr4.4:85065861-85065880 | MS.gene47841:CDS | 35.0% | |
ATCCATGGTTGTTGTAGAAA+CGG | - | chr4.4:85066009-85066028 | None:intergenic | 35.0% | |
ATGCAGAAGGAAAACTAAGT+GGG | + | chr4.4:85064945-85064964 | MS.gene47841:intron | 35.0% | |
CAAAATGGTGTAATAGGCAT+TGG | + | chr4.4:85065876-85065895 | MS.gene47841:CDS | 35.0% | |
CAAGAAACTTCCTAAACCAT+CGG | - | chr4.4:85067235-85067254 | None:intergenic | 35.0% | |
CAAGCCTTACAAGATGATTA+TGG | + | chr4.4:85065160-85065179 | MS.gene47841:CDS | 35.0% | |
CAATGAAAAAGGGTCACATA+TGG | - | chr4.4:85065130-85065149 | None:intergenic | 35.0% | |
CATAATCATCTTGTAAGGCT+TGG | - | chr4.4:85065162-85065181 | None:intergenic | 35.0% | |
CATACAGATTCTCCATATCT+TGG | + | chr4.4:85064821-85064840 | MS.gene47841:CDS | 35.0% | |
CCATCCAAACATGAAATCAA+GGG | - | chr4.4:85065967-85065986 | None:intergenic | 35.0% | |
CCATTCAAAGTTGTCCAAAA+GGG | - | chr4.4:85067132-85067151 | None:intergenic | 35.0% | |
CTAGTTAGTTAGTTGGTTAG+TGG | - | chr4.4:85065491-85065510 | None:intergenic | 35.0% | |
CTATTACTTGGCAATATCCT+TGG | - | chr4.4:85064847-85064866 | None:intergenic | 35.0% | |
GACAACTTTGAATGGAATGA+CGG | + | chr4.4:85067137-85067156 | MS.gene47841:CDS | 35.0% | |
GATATTTGCTTCCTGGAATT+TGG | + | chr4.4:85065714-85065733 | MS.gene47841:CDS | 35.0% | |
GGCTATATGTTTGTCCAAAA+GGG | + | chr4.4:85066557-85066576 | MS.gene47841:CDS | 35.0% | |
GTACTCAAAGTGTAAGAGAA+TGG | - | chr4.4:85065774-85065793 | None:intergenic | 35.0% | |
TAATCATCTTGTAAGGCTTG+GGG | - | chr4.4:85065160-85065179 | None:intergenic | 35.0% | |
TATGCAGAAGGAAAACTAAG+TGG | + | chr4.4:85064944-85064963 | MS.gene47841:intron | 35.0% | |
TCCATTCAAAGTTGTCCAAA+AGG | - | chr4.4:85067133-85067152 | None:intergenic | 35.0% | |
TGGCTATATGTTTGTCCAAA+AGG | + | chr4.4:85066556-85066575 | MS.gene47841:CDS | 35.0% | |
TTACTTTGTCTCCAAATTCC+AGG | - | chr4.4:85065728-85065747 | None:intergenic | 35.0% | |
TTGGAGACAAAGTAAAGCAT+TGG | + | chr4.4:85065733-85065752 | MS.gene47841:CDS | 35.0% | |
TTTATACAACCACTGACAAC+AGG | + | chr4.4:85066081-85066100 | MS.gene47841:CDS | 35.0% | |
TTTCCTTTGTGTACAACAGT+AGG | - | chr4.4:85066591-85066610 | None:intergenic | 35.0% | |
! | AACTATGTTTGTTGGTTGGT+TGG | - | chr4.4:85065533-85065552 | None:intergenic | 35.0% |
! | ATCCAACTATGTTTGTTGGT+TGG | - | chr4.4:85065537-85065556 | None:intergenic | 35.0% |
! | GAGCAATCTAAGAGTCTTAT+TGG | + | chr4.4:85066162-85066181 | MS.gene47841:CDS | 35.0% |
! | TGGAGACAAAGTAAAGCATT+GGG | + | chr4.4:85065734-85065753 | MS.gene47841:CDS | 35.0% |
!! | CATATGTGACCCTTTTTCAT+TGG | + | chr4.4:85065128-85065147 | MS.gene47841:CDS | 35.0% |
AAGGGATATACATTGGACCA+TGG | + | chr4.4:85066454-85066473 | MS.gene47841:CDS | 40.0% | |
AATTCCTCTACATTCTGCAG+CGG | + | chr4.4:85066248-85066267 | MS.gene47841:CDS | 40.0% | |
AGGCAAGGTGTGAATGTAAA+AGG | + | chr4.4:85067092-85067111 | MS.gene47841:intron | 40.0% | |
AGGGATATACATTGGACCAT+GGG | + | chr4.4:85066455-85066474 | MS.gene47841:CDS | 40.0% | |
CAATATCCTTGGCCAAGATA+TGG | - | chr4.4:85064836-85064855 | None:intergenic | 40.0% | |
CAGGGTCAAAATGGTGTAAT+AGG | + | chr4.4:85065870-85065889 | MS.gene47841:CDS | 40.0% | |
CCCTTGATTTCATGTTTGGA+TGG | + | chr4.4:85065964-85065983 | MS.gene47841:CDS | 40.0% | |
CTTTGTGGATATTTGCTTCC+TGG | + | chr4.4:85065707-85065726 | MS.gene47841:CDS | 40.0% | |
GAAAACACTATTAACGCCGT+CGG | - | chr4.4:85066280-85066299 | None:intergenic | 40.0% | |
GATTGCTCTTGAGTGAACTT+TGG | - | chr4.4:85066150-85066169 | None:intergenic | 40.0% | |
GCATTGGATTAAACTCTCAC+TGG | + | chr4.4:85065892-85065911 | MS.gene47841:CDS | 40.0% | |
GCCTCCATAATCATCTTGTA+AGG | - | chr4.4:85065167-85065186 | None:intergenic | 40.0% | |
GCCTTACAAGATGATTATGG+AGG | + | chr4.4:85065163-85065182 | MS.gene47841:CDS | 40.0% | |
GCTTTGTCAGCGAGAATATT+AGG | + | chr4.4:85065185-85065204 | MS.gene47841:CDS | 40.0% | |
GGGAAGATCCCAATGAAAAA+GGG | - | chr4.4:85065140-85065159 | None:intergenic | 40.0% | |
GTCACATATGGTATTTGACC+TGG | - | chr4.4:85065118-85065137 | None:intergenic | 40.0% | |
TATGCCATCTTCATTAGGAG+TGG | - | chr4.4:85066346-85066365 | None:intergenic | 40.0% | |
TGCAGAAGGAAAACTAAGTG+GGG | + | chr4.4:85064946-85064965 | MS.gene47841:intron | 40.0% | |
TGTTTGTCCAAAAGGGATTC+AGG | + | chr4.4:85066564-85066583 | MS.gene47841:CDS | 40.0% | |
TTCATTAGGAGTGGTGAGAA+AGG | - | chr4.4:85066337-85066356 | None:intergenic | 40.0% | |
! | AGGAATTGGTTTCGTTGCAT+TGG | - | chr4.4:85066235-85066254 | None:intergenic | 40.0% |
! | ATACTTTGCATGGTCCCTTT+TGG | + | chr4.4:85067115-85067134 | MS.gene47841:CDS | 40.0% |
! | ATGTTTGTTGGTTGGTTGGT+TGG | - | chr4.4:85065529-85065548 | None:intergenic | 40.0% |
! | CACAATTTTGTCACGATCCA+TGG | - | chr4.4:85066024-85066043 | None:intergenic | 40.0% |
! | CCCTTTTGGACAACTTTGAA+TGG | + | chr4.4:85067129-85067148 | MS.gene47841:CDS | 40.0% |
! | GGACGGCTTTTTGATCTAAT+GGG | - | chr4.4:85065938-85065957 | None:intergenic | 40.0% |
! | TCTAATGGGTCAGTTGAGTA+TGG | - | chr4.4:85065924-85065943 | None:intergenic | 40.0% |
! | TGGACGGCTTTTTGATCTAA+TGG | - | chr4.4:85065939-85065958 | None:intergenic | 40.0% |
!!! | TGGTTTTTTGTGTGAAGGCA+AGG | + | chr4.4:85067077-85067096 | MS.gene47841:intron | 40.0% |
AAGAGAGTCTTACTCACCCA+TGG | - | chr4.4:85066474-85066493 | None:intergenic | 45.0% | |
AATATGTGCAGGCTGCAACT+TGG | + | chr4.4:85066536-85066555 | MS.gene47841:intron | 45.0% | |
ACATAAGACACCATGCTTGC+TGG | - | chr4.4:85066114-85066133 | None:intergenic | 45.0% | |
AGCAAGCATGGTGTCTTATG+TGG | + | chr4.4:85066113-85066132 | MS.gene47841:CDS | 45.0% | |
ATGGGTGAGTAAGACTCTCT+TGG | + | chr4.4:85066473-85066492 | MS.gene47841:intron | 45.0% | |
ATTCCTCTACATTCTGCAGC+GGG | + | chr4.4:85066249-85066268 | MS.gene47841:CDS | 45.0% | |
CATCTGCATGAGCAAGAAGT+TGG | - | chr4.4:85065824-85065843 | None:intergenic | 45.0% | |
CTCACCACTCCTAATGAAGA+TGG | + | chr4.4:85066339-85066358 | MS.gene47841:intron | 45.0% | |
GACCGTTTCTACAACAACCA+TGG | + | chr4.4:85066004-85066023 | MS.gene47841:intron | 45.0% | |
GACGCCCTTGATTTCATGTT+TGG | + | chr4.4:85065960-85065979 | MS.gene47841:CDS | 45.0% | |
GATTCTCCATATCTTGGCCA+AGG | + | chr4.4:85064827-85064846 | MS.gene47841:CDS | 45.0% | |
GCAAGCATGGTGTCTTATGT+GGG | + | chr4.4:85066114-85066133 | MS.gene47841:CDS | 45.0% | |
GCAGAAGGAAAACTAAGTGG+GGG | + | chr4.4:85064947-85064966 | MS.gene47841:intron | 45.0% | |
GCTGCAGAATGTAGAGGAAT+TGG | - | chr4.4:85066249-85066268 | None:intergenic | 45.0% | |
GGACCTACTGTTGTACACAA+AGG | + | chr4.4:85066585-85066604 | MS.gene47841:CDS | 45.0% | |
GGGGAAGATCCCAATGAAAA+AGG | - | chr4.4:85065141-85065160 | None:intergenic | 45.0% | |
! | AGTAGGTCCTGAATCCCTTT+TGG | - | chr4.4:85066574-85066593 | None:intergenic | 45.0% |
! | GAAGTTGGTTGTGTGTTGAC+TGG | - | chr4.4:85065809-85065828 | None:intergenic | 45.0% |
!! | ACATGAAATCAAGGGCGTCT+TGG | - | chr4.4:85065959-85065978 | None:intergenic | 45.0% |
AGTATCCATGAGCGCCTCTT+CGG | - | chr4.4:85066905-85066924 | None:intergenic | 50.0% | |
GGATACTCTCCTGTTGTCAG+TGG | - | chr4.4:85066093-85066112 | None:intergenic | 50.0% | |
TCCAACACTATCACCCGAAG+AGG | + | chr4.4:85066888-85066907 | MS.gene47841:CDS | 50.0% | |
! | GACGGATACACTGTGCGTTT+TGG | + | chr4.4:85067155-85067174 | MS.gene47841:CDS | 50.0% |
! | TGCATTGGCAGCATACATGC+TGG | - | chr4.4:85066220-85066239 | None:intergenic | 50.0% |
!! | AGGAGAGTATCCAGCAAGCA+TGG | + | chr4.4:85066101-85066120 | MS.gene47841:CDS | 50.0% |
!! | AGTGGGGGTATTAACCCAGA+CGG | + | chr4.4:85064962-85064981 | MS.gene47841:CDS | 50.0% |
!! | GAAATCAAGGGCGTCTTGGA+CGG | - | chr4.4:85065955-85065974 | None:intergenic | 50.0% |
AACCATCGGGCAGAGAGCTT+AGG | - | chr4.4:85067221-85067240 | None:intergenic | 55.0% | |
ACCATCGGGCAGAGAGCTTA+GGG | - | chr4.4:85067220-85067239 | None:intergenic | 55.0% | |
AGCTCTCTGCCCGATGGTTT+AGG | + | chr4.4:85067222-85067241 | MS.gene47841:CDS | 55.0% | |
GTATCCATGAGCGCCTCTTC+GGG | - | chr4.4:85066904-85066923 | None:intergenic | 55.0% | |
! | GCCTCTTCGGGTGATAGTGT+TGG | - | chr4.4:85066892-85066911 | None:intergenic | 55.0% |
ACCCTAAGCTCTCTGCCCGA+TGG | + | chr4.4:85067216-85067235 | MS.gene47841:CDS | 60.0% | |
CCTCTACATTCTGCAGCGGG+CGG | + | chr4.4:85066252-85066271 | MS.gene47841:CDS | 60.0% | |
!! | ATCACCCGAAGAGGCGCTCA+TGG | + | chr4.4:85066897-85066916 | MS.gene47841:CDS | 60.0% |
CCGCCCGCTGCAGAATGTAG+AGG | - | chr4.4:85066255-85066274 | None:intergenic | 65.0% | |
!! | TCTGCAGCGGGCGGCGCCGA+CGG | + | chr4.4:85066261-85066280 | MS.gene47841:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 85064799 | 85067277 | 85064799 | ID=MS.gene47841 |
chr4.4 | mRNA | 85064799 | 85067277 | 85064799 | ID=MS.gene47841.t1;Parent=MS.gene47841 |
chr4.4 | exon | 85064799 | 85064859 | 85064799 | ID=MS.gene47841.t1.exon1;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85064799 | 85064859 | 85064799 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85064951 | 85065028 | 85064951 | ID=MS.gene47841.t1.exon2;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85064951 | 85065028 | 85064951 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85065119 | 85065206 | 85065119 | ID=MS.gene47841.t1.exon3;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85065119 | 85065206 | 85065119 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85065692 | 85065985 | 85065692 | ID=MS.gene47841.t1.exon4;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85065692 | 85065985 | 85065692 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85066080 | 85066324 | 85066080 | ID=MS.gene47841.t1.exon5;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85066080 | 85066324 | 85066080 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85066442 | 85066476 | 85066442 | ID=MS.gene47841.t1.exon6;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85066442 | 85066476 | 85066442 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85066547 | 85066646 | 85066547 | ID=MS.gene47841.t1.exon7;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85066547 | 85066646 | 85066547 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85066869 | 85066977 | 85066869 | ID=MS.gene47841.t1.exon8;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85066869 | 85066977 | 85066869 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
chr4.4 | exon | 85067094 | 85067277 | 85067094 | ID=MS.gene47841.t1.exon9;Parent=MS.gene47841.t1 |
chr4.4 | CDS | 85067094 | 85067277 | 85067094 | ID=cds.MS.gene47841.t1;Parent=MS.gene47841.t1 |
Gene Sequence |
Protein sequence |