Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47929.t1 | XP_003630015.1 | 89.2 | 594 | 64 | 0 | 6 | 599 | 11 | 604 | 3.00E-306 | 1060.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47929.t1 | Q84MA5 | 67.3 | 593 | 184 | 1 | 5 | 597 | 8 | 590 | 8.8e-230 | 797.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47929.t1 | G7L9L7 | 89.2 | 594 | 64 | 0 | 6 | 599 | 11 | 604 | 2.2e-306 | 1060.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042480 | MS.gene47929 | PPI |
| MS.gene58674 | MS.gene47929 | PPI |
| MS.gene032361 | MS.gene47929 | PPI |
| MS.gene00402 | MS.gene47929 | PPI |
| MS.gene041367 | MS.gene47929 | PPI |
| MS.gene47297 | MS.gene47929 | PPI |
| MS.gene08148 | MS.gene47929 | PPI |
| MS.gene042491 | MS.gene47929 | PPI |
| MS.gene32277 | MS.gene47929 | PPI |
| MS.gene49831 | MS.gene47929 | PPI |
| MS.gene41790 | MS.gene47929 | PPI |
| MS.gene08137 | MS.gene47929 | PPI |
| MS.gene007812 | MS.gene47929 | PPI |
| MS.gene007811 | MS.gene47929 | PPI |
| MS.gene41795 | MS.gene47929 | PPI |
| MS.gene08144 | MS.gene47929 | PPI |
| MS.gene47929 | MS.gene073450 | PPI |
| MS.gene41792 | MS.gene47929 | PPI |
| MS.gene38965 | MS.gene47929 | PPI |
| MS.gene38964 | MS.gene47929 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47929.t1 | MTR_8g089320 | 89.189 | 592 | 64 | 0 | 8 | 599 | 13 | 604 | 0.0 | 1086 |
| MS.gene47929.t1 | MTR_8g089360 | 74.042 | 574 | 145 | 3 | 16 | 589 | 9 | 578 | 0.0 | 867 |
| MS.gene47929.t1 | MTR_8g089360 | 74.042 | 574 | 145 | 3 | 16 | 589 | 26 | 595 | 0.0 | 867 |
| MS.gene47929.t1 | MTR_8g089340 | 85.683 | 461 | 65 | 1 | 144 | 603 | 1 | 461 | 0.0 | 780 |
| MS.gene47929.t1 | MTR_1g030660 | 66.000 | 550 | 186 | 1 | 23 | 572 | 23 | 571 | 0.0 | 766 |
| MS.gene47929.t1 | MTR_2g035430 | 56.388 | 587 | 251 | 1 | 1 | 582 | 1 | 587 | 0.0 | 698 |
| MS.gene47929.t1 | MTR_8g461380 | 51.429 | 560 | 270 | 2 | 14 | 572 | 26 | 584 | 0.0 | 581 |
| MS.gene47929.t1 | MTR_1g111740 | 42.517 | 588 | 315 | 4 | 23 | 598 | 6 | 582 | 3.73e-154 | 456 |
| MS.gene47929.t1 | MTR_4g099270 | 40.901 | 533 | 301 | 5 | 46 | 568 | 1 | 529 | 4.20e-128 | 388 |
| MS.gene47929.t1 | MTR_4g099270 | 44.670 | 394 | 212 | 3 | 29 | 418 | 5 | 396 | 1.45e-108 | 332 |
| MS.gene47929.t1 | MTR_4g099270 | 38.955 | 421 | 243 | 5 | 158 | 568 | 1 | 417 | 1.44e-90 | 287 |
| MS.gene47929.t1 | MTR_4g099270 | 44.884 | 303 | 163 | 2 | 29 | 327 | 5 | 307 | 4.49e-85 | 268 |
| MS.gene47929.t1 | MTR_6g027630 | 35.225 | 423 | 260 | 4 | 29 | 441 | 6 | 424 | 4.57e-78 | 258 |
| MS.gene47929.t1 | MTR_6g027630 | 35.225 | 423 | 260 | 4 | 29 | 441 | 6 | 424 | 1.27e-77 | 258 |
| MS.gene47929.t1 | MTR_8g089342 | 91.803 | 122 | 10 | 0 | 12 | 133 | 18 | 139 | 1.75e-76 | 239 |
| MS.gene47929.t1 | MTR_6g027680 | 34.123 | 422 | 265 | 3 | 27 | 441 | 12 | 427 | 2.22e-75 | 251 |
| MS.gene47929.t1 | MTR_6g027660 | 33.333 | 429 | 273 | 4 | 20 | 441 | 3 | 425 | 5.57e-75 | 251 |
| MS.gene47929.t1 | MTR_7g086510 | 36.228 | 403 | 246 | 4 | 46 | 441 | 21 | 419 | 2.13e-73 | 247 |
| MS.gene47929.t1 | MTR_7g086610 | 37.337 | 383 | 231 | 3 | 67 | 441 | 32 | 413 | 5.02e-73 | 246 |
| MS.gene47929.t1 | MTR_6g027650 | 33.647 | 425 | 257 | 5 | 29 | 441 | 6 | 417 | 5.58e-73 | 246 |
| MS.gene47929.t1 | MTR_6g034535 | 43.657 | 268 | 136 | 5 | 323 | 581 | 49 | 310 | 2.42e-69 | 227 |
| MS.gene47929.t1 | MTR_6g034535 | 42.708 | 96 | 30 | 1 | 93 | 188 | 19 | 89 | 4.66e-15 | 77.0 |
| MS.gene47929.t1 | MTR_7g007850 | 29.720 | 535 | 349 | 10 | 60 | 578 | 42 | 565 | 1.69e-64 | 222 |
| MS.gene47929.t1 | MTR_7g007850 | 28.142 | 565 | 349 | 11 | 60 | 578 | 42 | 595 | 2.38e-60 | 211 |
| MS.gene47929.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 3.32e-57 | 200 |
| MS.gene47929.t1 | MTR_6g027630 | 34.503 | 342 | 211 | 3 | 110 | 441 | 1 | 339 | 4.22e-57 | 201 |
| MS.gene47929.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 6.91e-57 | 201 |
| MS.gene47929.t1 | MTR_6g027670 | 34.810 | 158 | 103 | 0 | 284 | 441 | 1 | 158 | 2.55e-27 | 112 |
| MS.gene47929.t1 | MTR_2g064760 | 89.286 | 28 | 3 | 0 | 485 | 512 | 14 | 41 | 4.01e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47929.t1 | AT4G21120 | 67.059 | 595 | 186 | 1 | 5 | 599 | 8 | 592 | 0.0 | 835 |
| MS.gene47929.t1 | AT2G34960 | 58.897 | 562 | 229 | 2 | 4 | 564 | 1 | 561 | 0.0 | 684 |
| MS.gene47929.t1 | AT4G21120 | 64.823 | 452 | 149 | 1 | 148 | 599 | 1 | 442 | 0.0 | 608 |
| MS.gene47929.t1 | AT1G17120 | 53.501 | 557 | 258 | 1 | 8 | 564 | 22 | 577 | 0.0 | 592 |
| MS.gene47929.t1 | AT5G04770 | 41.953 | 553 | 301 | 5 | 25 | 562 | 15 | 562 | 2.92e-145 | 433 |
| MS.gene47929.t1 | AT3G10600 | 41.533 | 561 | 298 | 7 | 22 | 562 | 11 | 561 | 1.16e-144 | 431 |
| MS.gene47929.t1 | AT5G04770 | 42.969 | 384 | 209 | 2 | 25 | 398 | 15 | 398 | 1.28e-106 | 327 |
| MS.gene47929.t1 | AT3G10600 | 40.000 | 425 | 225 | 7 | 158 | 562 | 1 | 415 | 1.53e-100 | 313 |
| MS.gene47929.t1 | AT5G04770 | 40.476 | 420 | 230 | 5 | 158 | 562 | 1 | 415 | 4.12e-95 | 298 |
| MS.gene47929.t1 | AT5G36940 | 35.770 | 383 | 239 | 3 | 66 | 441 | 28 | 410 | 5.26e-74 | 248 |
| MS.gene47929.t1 | AT3G03720 | 33.915 | 401 | 256 | 3 | 48 | 441 | 7 | 405 | 5.96e-72 | 243 |
| MS.gene47929.t1 | AT1G58030 | 33.766 | 385 | 248 | 3 | 64 | 441 | 37 | 421 | 2.18e-68 | 234 |
| MS.gene47929.t1 | AT1G05940 | 29.151 | 542 | 354 | 7 | 59 | 583 | 40 | 568 | 2.43e-64 | 221 |
| MS.gene47929.t1 | AT1G05940 | 29.637 | 496 | 326 | 6 | 59 | 537 | 40 | 529 | 7.42e-61 | 211 |
| MS.gene47929.t1 | AT1G05940 | 30.679 | 427 | 283 | 4 | 59 | 473 | 40 | 465 | 8.42e-59 | 205 |
| MS.gene47929.t1 | AT1G05940 | 27.753 | 454 | 300 | 5 | 146 | 583 | 9 | 450 | 5.79e-43 | 160 |
Find 144 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTCCTATTGGTCTTAT+TGG | 0.099434 | 4.1:+11447864 | MS.gene47929:CDS |
| CAATTGGAATTTCAGCTTAT+TGG | 0.122057 | 4.1:+11448381 | MS.gene47929:CDS |
| TATTCTCAGTTTACGCCTTT+TGG | 0.183223 | 4.1:+11447741 | MS.gene47929:CDS |
| GTGTGTCTTGTGTTGATTAT+TGG | 0.196899 | 4.1:+11448353 | MS.gene47929:CDS |
| CTTGTATACTATGTGCTATT+AGG | 0.206726 | 4.1:+11448629 | MS.gene47929:CDS |
| AATTGGAATTTCAGCTTATT+GGG | 0.231227 | 4.1:+11448382 | MS.gene47929:CDS |
| GTTATTAACATATTCCTTCT+TGG | 0.233431 | 4.1:+11448554 | MS.gene47929:CDS |
| GCTTGTAGCCTTAGCACTTT+TGG | 0.242533 | 4.1:+11448274 | MS.gene47929:CDS |
| GGGGAGTTCCTTTGGTTCCT+TGG | 0.281218 | 4.1:+11448513 | MS.gene47929:CDS |
| TTGATAGAAAATCGTATATA+AGG | 0.283159 | 4.1:+11448582 | MS.gene47929:CDS |
| ACTATTATACGGAAATAGTT+AGG | 0.294212 | 4.1:-11447531 | None:intergenic |
| CATAACATGAACCCTGATTA+TGG | 0.301559 | 4.1:+11447555 | MS.gene47929:CDS |
| TTGTATACTATGTGCTATTA+GGG | 0.303775 | 4.1:+11448630 | MS.gene47929:CDS |
| TCATGTTATGAACTATTATA+CGG | 0.324528 | 4.1:-11447542 | None:intergenic |
| TGCGGAGCTGGTGGAGATTA+AGG | 0.326488 | 4.1:+11446936 | MS.gene47929:CDS |
| TGGCAAAGAAGCCTAAATTA+TGG | 0.332142 | 4.1:+11448492 | MS.gene47929:CDS |
| CTTCTCTTCATAGTAATTGC+TGG | 0.335458 | 4.1:+11447693 | MS.gene47929:CDS |
| AAAGGAACTCCCCATAATTT+AGG | 0.346807 | 4.1:-11448503 | None:intergenic |
| GGGTCAAGATGGCCATAATC+AGG | 0.349541 | 4.1:-11447567 | None:intergenic |
| TAAATTATGGGGAGTTCCTT+TGG | 0.356075 | 4.1:+11448505 | MS.gene47929:CDS |
| CGTATATAAGGTTTGCGGTT+TGG | 0.357696 | 4.1:+11448594 | MS.gene47929:CDS |
| GCCAAGTACATTATTTCATT+AGG | 0.357842 | 4.1:+11448014 | MS.gene47929:CDS |
| GTGAGGACCACAACAGCAAC+AGG | 0.374521 | 4.1:-11447588 | None:intergenic |
| TATAATTAATTACCTGCAAC+AGG | 0.375957 | 4.1:-11447168 | None:intergenic |
| CTGAGAATAGTTCTCGGGTT+TGG | 0.377128 | 4.1:-11447727 | None:intergenic |
| GGCTAGGGAGCAAGCAGGTC+CGG | 0.379687 | 4.1:+11447065 | MS.gene47929:CDS |
| AGAGCCTTTAGTGCTGTAAA+TGG | 0.380012 | 4.1:-11447628 | None:intergenic |
| TTCCATTGCTTCTCAACCTC+CGG | 0.382100 | 4.1:-11448716 | None:intergenic |
| ATACTCAAGGAGGATGTTCC+CGG | 0.387864 | 4.1:-11447442 | None:intergenic |
| GGCAAAGAAGCCTAAATTAT+GGG | 0.393362 | 4.1:+11448493 | MS.gene47929:CDS |
| ATTGAGATTGTAGCATTCAT+AGG | 0.394274 | 4.1:-11448164 | None:intergenic |
| TCAAGTGGGGTAACTACAAA+AGG | 0.399563 | 4.1:+11448311 | MS.gene47929:CDS |
| ATTGGTTCAGTTGTCGGGTC+TGG | 0.399959 | 4.1:+11447018 | MS.gene47929:CDS |
| TGGTGGGACTTGATGTGGTT+TGG | 0.403047 | 4.1:+11446994 | MS.gene47929:CDS |
| TTGGCATTGGTTCAGTTGTC+GGG | 0.404173 | 4.1:+11447013 | MS.gene47929:CDS |
| TTGATTATTGGATCTTCAAT+TGG | 0.407894 | 4.1:+11448365 | MS.gene47929:CDS |
| AGGGAGATGGCAACAGTTGA+TGG | 0.415607 | 4.1:+11446772 | None:intergenic |
| TAGTGCTGTTGGAATGGATT+GGG | 0.417491 | 4.1:+11447992 | MS.gene47929:CDS |
| AATTTAGGCTTCTTTGCCAT+TGG | 0.418140 | 4.1:-11448488 | None:intergenic |
| ATACATATCAAGTTATCAAT+TGG | 0.420768 | 4.1:-11448789 | None:intergenic |
| TTTGGCATTGGTTCAGTTGT+CGG | 0.423683 | 4.1:+11447012 | MS.gene47929:CDS |
| AGATGAAGAAGACGCTGAAT+TGG | 0.426669 | 4.1:+11446974 | MS.gene47929:CDS |
| GCTGTGGAAATACCTGTTGC+AGG | 0.427756 | 4.1:+11447156 | MS.gene47929:CDS |
| TCTTGACCCTGTTGCTGTTG+TGG | 0.431072 | 4.1:+11447581 | MS.gene47929:CDS |
| GCTCTTGTTGATGAAAGAAC+AGG | 0.435974 | 4.1:+11448137 | MS.gene47929:CDS |
| ATAAGGTTTGCGGTTTGGAC+AGG | 0.438702 | 4.1:+11448599 | MS.gene47929:CDS |
| GACTTGATGTGGTTTGGCAT+TGG | 0.438927 | 4.1:+11447000 | MS.gene47929:CDS |
| ATTGAGCCAATAAGACCAAT+AGG | 0.439105 | 4.1:-11447870 | None:intergenic |
| AACAGTGAGCATGGATGGAT+TGG | 0.444473 | 4.1:+11448407 | MS.gene47929:CDS |
| GTGTTGTCCTTTGTCGTCTC+CGG | 0.450135 | 4.1:+11447093 | MS.gene47929:CDS |
| GATGTTCCCGGCCGCTATAA+AGG | 0.452892 | 4.1:-11447430 | None:intergenic |
| GGAGGAGTCGTTTAAGAGTT+GGG | 0.454594 | 4.1:+11446840 | MS.gene47929:CDS |
| CTTGCCATTTACAGCACTAA+AGG | 0.456544 | 4.1:+11447624 | MS.gene47929:CDS |
| GCACTAAAAGCAACAGAGAA+AGG | 0.459176 | 4.1:-11447975 | None:intergenic |
| CGGAGGAGTCGTTTAAGAGT+TGG | 0.463490 | 4.1:+11446839 | MS.gene47929:CDS |
| ACCTAATGAAATAATGTACT+TGG | 0.470231 | 4.1:-11448015 | None:intergenic |
| TTAGTGCTGTTGGAATGGAT+TGG | 0.470694 | 4.1:+11447991 | MS.gene47929:CDS |
| TGCTTACCGGACTTGAGGCT+AGG | 0.472425 | 4.1:+11447049 | MS.gene47929:CDS |
| CCTGGTAGAGACATTCCTAT+TGG | 0.474972 | 4.1:+11447855 | MS.gene47929:CDS |
| AGATAACAAAGCGGAGATAC+CGG | 0.475452 | 4.1:-11447112 | None:intergenic |
| CTATTATACGGAAATAGTTA+GGG | 0.475715 | 4.1:-11447530 | None:intergenic |
| CAACTCTTAAACGACTCCTC+CGG | 0.477205 | 4.1:-11446838 | None:intergenic |
| TGCTAGTAAGCAATATATTA+CGG | 0.478001 | 4.1:-11447904 | None:intergenic |
| ACATAGCAGTGGTTCTGATC+CGG | 0.487510 | 4.1:+11448697 | MS.gene47929:CDS |
| AACTCTTAAACGACTCCTCC+GGG | 0.489247 | 4.1:-11446837 | None:intergenic |
| ATCCACTGATCATGCGGAGC+TGG | 0.490160 | 4.1:+11446924 | MS.gene47929:CDS |
| CACTGATCATGCGGAGCTGG+TGG | 0.500362 | 4.1:+11446927 | MS.gene47929:CDS |
| AAACGATCCTTCAACCGAAA+AGG | 0.503749 | 4.1:-11446892 | None:intergenic |
| AGTTGAGCTAGGAGACTTTG+TGG | 0.506976 | 4.1:+11447407 | MS.gene47929:CDS |
| ACGCCGCCGTAGCACGATCA+TGG | 0.508863 | 4.1:+11447475 | MS.gene47929:CDS |
| AAAATCGTATATAAGGTTTG+CGG | 0.509479 | 4.1:+11448589 | MS.gene47929:CDS |
| CGTAAACTGAGAATAGTTCT+CGG | 0.509480 | 4.1:-11447733 | None:intergenic |
| CCAATAGGAATGTCTCTACC+AGG | 0.509969 | 4.1:-11447855 | None:intergenic |
| TTCTATCAATAGATCCAAGA+AGG | 0.516981 | 4.1:-11448568 | None:intergenic |
| CAGTTGATGGAGTACGGAAG+AGG | 0.523221 | 4.1:+11446785 | MS.gene47929:CDS |
| GCATACTTAAAAGTTGAGCT+AGG | 0.528109 | 4.1:+11447396 | MS.gene47929:CDS |
| GCAGAGGGTAGCAAAATAAG+AGG | 0.528621 | 4.1:-11447499 | None:intergenic |
| GGGCTAACAGTGAGCATGGA+TGG | 0.537453 | 4.1:+11448402 | MS.gene47929:CDS |
| TAAGGTTTGCGGTTTGGACA+GGG | 0.541476 | 4.1:+11448600 | MS.gene47929:CDS |
| TTTGTGGCCTTTATAGCGGC+CGG | 0.542920 | 4.1:+11447423 | MS.gene47929:CDS |
| CTAATAGCACATAGTATACA+AGG | 0.543713 | 4.1:-11448628 | None:intergenic |
| GTGAGGCGTTACTATTCAAG+TGG | 0.544235 | 4.1:+11448296 | MS.gene47929:CDS |
| CAACAGCAACAGGGTCAAGA+TGG | 0.544563 | 4.1:-11447578 | None:intergenic |
| CTTTAGTGCTGTAAATGGCA+AGG | 0.545192 | 4.1:-11447623 | None:intergenic |
| ACAAAGGACAACACAACTGC+CGG | 0.545347 | 4.1:-11447084 | None:intergenic |
| TGGCAACAGTTGATGGAGTA+CGG | 0.547405 | 4.1:+11446779 | MS.gene47929:CDS |
| ACCATACCATGAAACCCAAA+AGG | 0.547517 | 4.1:-11447756 | None:intergenic |
| TGAAGAAGACGCTGAATTGG+TGG | 0.547778 | 4.1:+11446977 | MS.gene47929:CDS |
| TGCAGTTTCAACAATGGCTG+AGG | 0.548532 | 4.1:+11447821 | MS.gene47929:CDS |
| AGTTGATGGAGTACGGAAGA+GGG | 0.549210 | 4.1:+11446786 | MS.gene47929:CDS |
| GTAAACTGAGAATAGTTCTC+GGG | 0.549675 | 4.1:-11447732 | None:intergenic |
| CACCAGCTCCGCATGATCAG+TGG | 0.550498 | 4.1:-11446926 | None:intergenic |
| TTAATAACAATAGATAAAGA+AGG | 0.556654 | 4.1:-11448539 | None:intergenic |
| GCTTACCGGACTTGAGGCTA+GGG | 0.557372 | 4.1:+11447050 | MS.gene47929:CDS |
| ATCCGGAGGTTGAGAAGCAA+TGG | 0.560522 | 4.1:+11448714 | MS.gene47929:CDS |
| GGAGATACCGGAGACGACAA+AGG | 0.565622 | 4.1:-11447100 | None:intergenic |
| CAAGTGGGGTAACTACAAAA+GGG | 0.569446 | 4.1:+11448312 | MS.gene47929:CDS |
| TTGTGGCCTTTATAGCGGCC+GGG | 0.569869 | 4.1:+11447424 | MS.gene47929:CDS |
| CTTTGATGCAGTTTCAACAA+TGG | 0.570876 | 4.1:+11447815 | MS.gene47929:CDS |
| CAAGATGGAGCAAGGTGCTG+TGG | 0.572819 | 4.1:+11448739 | MS.gene47929:CDS |
| TATTGGGCTAACAGTGAGCA+TGG | 0.574198 | 4.1:+11448398 | MS.gene47929:CDS |
| TTTAAGAGTTGGGAAAACTA+CGG | 0.577286 | 4.1:+11446850 | MS.gene47929:CDS |
| AAACTACGGAAAATCTGTCA+TGG | 0.579172 | 4.1:+11446864 | MS.gene47929:CDS |
| TTTAGTGCTGTAAATGGCAA+GGG | 0.579804 | 4.1:-11447622 | None:intergenic |
| ATTTCATTAGGTGCTTTGAA+AGG | 0.582581 | 4.1:+11448026 | MS.gene47929:CDS |
| TGAATTGGTGGGACTTGATG+TGG | 0.584039 | 4.1:+11446989 | MS.gene47929:CDS |
| GTAAATGGCAAGGGTTGTGA+TGG | 0.589331 | 4.1:-11447613 | None:intergenic |
| ACGCCTCACCAAAAGTGCTA+AGG | 0.593995 | 4.1:-11448282 | None:intergenic |
| CTTGAGGCTAGGGAGCAAGC+AGG | 0.600694 | 4.1:+11447060 | MS.gene47929:CDS |
| TGAGGCGTTACTATTCAAGT+GGG | 0.601081 | 4.1:+11448297 | MS.gene47929:CDS |
| TGAGAAGCAATGGAACAAGA+TGG | 0.601081 | 4.1:+11448724 | MS.gene47929:CDS |
| GTACTCACATGATGCCACCT+TGG | 0.601374 | 4.1:+11448111 | MS.gene47929:CDS |
| TTGCTCCCTAGCCTCAAGTC+CGG | 0.601610 | 4.1:-11447055 | None:intergenic |
| GGTCAAGATGGCCATAATCA+GGG | 0.602250 | 4.1:-11447566 | None:intergenic |
| AGACTTTGTGGCCTTTATAG+CGG | 0.604630 | 4.1:+11447419 | MS.gene47929:CDS |
| GAAGGTAGCCAAGGAACCAA+AGG | 0.606519 | 4.1:-11448521 | None:intergenic |
| CTGTTACACAGAGTTTGCTG+TGG | 0.607651 | 4.1:+11447140 | MS.gene47929:CDS |
| GAAGAAGACGCTGAATTGGT+GGG | 0.611576 | 4.1:+11446978 | MS.gene47929:CDS |
| ATAGATAAAGAAGGTAGCCA+AGG | 0.615378 | 4.1:-11448530 | None:intergenic |
| GTGGAGATTAAGGCTCGTAG+TGG | 0.627815 | 4.1:+11446946 | MS.gene47929:CDS |
| AGAGGTCCATGATCGTGCTA+CGG | 0.630001 | 4.1:-11447481 | None:intergenic |
| CGATGCGATGTAGTTGAAGA+CGG | 0.632773 | 4.1:-11447652 | None:intergenic |
| CAATGGAACAAGATGGAGCA+AGG | 0.635963 | 4.1:+11448731 | MS.gene47929:CDS |
| TGCTTTGAAAGGAATGACAA+CGG | 0.638848 | 4.1:+11448037 | MS.gene47929:CDS |
| GAAACGATCCACTGATCATG+CGG | 0.640662 | 4.1:+11446918 | MS.gene47929:CDS |
| CGTTGCTTATAATATACTCA+AGG | 0.641365 | 4.1:-11447455 | None:intergenic |
| TGGAGATTAAGGCTCGTAGT+GGG | 0.642539 | 4.1:+11446947 | MS.gene47929:CDS |
| GCAAAGAAGCCTAAATTATG+GGG | 0.643860 | 4.1:+11448494 | MS.gene47929:CDS |
| GGTCCATGATCGTGCTACGG+CGG | 0.644699 | 4.1:-11447478 | None:intergenic |
| TAGCAGTGGTTCTGATCCGG+AGG | 0.648811 | 4.1:+11448700 | MS.gene47929:CDS |
| GTTGATGGAGTACGGAAGAG+GGG | 0.650485 | 4.1:+11446787 | MS.gene47929:CDS |
| GATAAGAGTAAACATAGCAG+TGG | 0.653043 | 4.1:+11448686 | MS.gene47929:CDS |
| GCTGAGGAAACTAAGAACCC+TGG | 0.654351 | 4.1:+11447837 | MS.gene47929:CDS |
| TGCTTATAATATACTCAAGG+AGG | 0.670617 | 4.1:-11447452 | None:intergenic |
| CAATAGGAATGTCTCTACCA+GGG | 0.688021 | 4.1:-11447854 | None:intergenic |
| ACAAAGTAGAAATCGACATG+AGG | 0.689359 | 4.1:-11448241 | None:intergenic |
| CAAGGGTTGTGATGGCTGTG+AGG | 0.703368 | 4.1:-11447605 | None:intergenic |
| TGAGGACCACAACAGCAACA+GGG | 0.726103 | 4.1:-11447587 | None:intergenic |
| TCAACAAGAGCAAACCAAGG+TGG | 0.728106 | 4.1:-11448125 | None:intergenic |
| ACAGAAGACAGATAACAAAG+CGG | 0.729498 | 4.1:-11447121 | None:intergenic |
| TCATCAACAAGAGCAAACCA+AGG | 0.735762 | 4.1:-11448128 | None:intergenic |
| TGAAGAGAAGAACAAGCACG+TGG | 0.736575 | 4.1:-11447680 | None:intergenic |
| TAGTAAGCAATATATTACGG+TGG | 0.742444 | 4.1:-11447901 | None:intergenic |
| GAGGCGTTACTATTCAAGTG+GGG | 0.751832 | 4.1:+11448298 | MS.gene47929:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAACAATAGATAAAGA+AGG | - | chr4.1:11448542-11448561 | None:intergenic | 15.0% |
| !! | ATGCTTTGATAAGATAAAAA+AGG | + | chr4.1:11447253-11447272 | MS.gene47929:intron | 20.0% |
| !! | TCATGTTATGAACTATTATA+CGG | - | chr4.1:11447545-11447564 | None:intergenic | 20.0% |
| !! | TTGATAGAAAATCGTATATA+AGG | + | chr4.1:11448582-11448601 | MS.gene47929:CDS | 20.0% |
| !!! | ACTATTTTTGTAATAGTACA+CGG | - | chr4.1:11447315-11447334 | None:intergenic | 20.0% |
| !!! | TTTTTATCTTATCAAAGCAT+TGG | - | chr4.1:11447253-11447272 | None:intergenic | 20.0% |
| ! | AAAATCGTATATAAGGTTTG+CGG | + | chr4.1:11448589-11448608 | MS.gene47929:CDS | 25.0% |
| ! | AATTGGAATTTCAGCTTATT+GGG | + | chr4.1:11448382-11448401 | MS.gene47929:CDS | 25.0% |
| ! | ACCTAATGAAATAATGTACT+TGG | - | chr4.1:11448018-11448037 | None:intergenic | 25.0% |
| ! | ACTATTATACGGAAATAGTT+AGG | - | chr4.1:11447534-11447553 | None:intergenic | 25.0% |
| ! | CTATTATACGGAAATAGTTA+GGG | - | chr4.1:11447533-11447552 | None:intergenic | 25.0% |
| ! | GTTATTAACATATTCCTTCT+TGG | + | chr4.1:11448554-11448573 | MS.gene47929:CDS | 25.0% |
| ! | TATAATTAATTACCTGCAAC+AGG | - | chr4.1:11447171-11447190 | None:intergenic | 25.0% |
| ! | TGCTAGTAAGCAATATATTA+CGG | - | chr4.1:11447907-11447926 | None:intergenic | 25.0% |
| ! | TTGATTATTGGATCTTCAAT+TGG | + | chr4.1:11448365-11448384 | MS.gene47929:CDS | 25.0% |
| !! | TTGTATACTATGTGCTATTA+GGG | + | chr4.1:11448630-11448649 | MS.gene47929:CDS | 25.0% |
| !! | TTGTTCCATTATGGTTTTTA+GGG | + | chr4.1:11448441-11448460 | MS.gene47929:CDS | 25.0% |
| !! | TTTGTTCCATTATGGTTTTT+AGG | + | chr4.1:11448440-11448459 | MS.gene47929:CDS | 25.0% |
| ATTGAGATTGTAGCATTCAT+AGG | - | chr4.1:11448167-11448186 | None:intergenic | 30.0% | |
| CAATTGGAATTTCAGCTTAT+TGG | + | chr4.1:11448381-11448400 | MS.gene47929:CDS | 30.0% | |
| CGTTGCTTATAATATACTCA+AGG | - | chr4.1:11447458-11447477 | None:intergenic | 30.0% | |
| CTAATAGCACATAGTATACA+AGG | - | chr4.1:11448631-11448650 | None:intergenic | 30.0% | |
| GCCAAGTACATTATTTCATT+AGG | + | chr4.1:11448014-11448033 | MS.gene47929:CDS | 30.0% | |
| TAGTAAGCAATATATTACGG+TGG | - | chr4.1:11447904-11447923 | None:intergenic | 30.0% | |
| TGCTTATAATATACTCAAGG+AGG | - | chr4.1:11447455-11447474 | None:intergenic | 30.0% | |
| TTCTATCAATAGATCCAAGA+AGG | - | chr4.1:11448571-11448590 | None:intergenic | 30.0% | |
| TTTAAGAGTTGGGAAAACTA+CGG | + | chr4.1:11446850-11446869 | MS.gene47929:CDS | 30.0% | |
| ! | ACGCAATTTTTGTTCCATTA+TGG | + | chr4.1:11448432-11448451 | MS.gene47929:CDS | 30.0% |
| ! | ATTTCATTAGGTGCTTTGAA+AGG | + | chr4.1:11448026-11448045 | MS.gene47929:CDS | 30.0% |
| ! | CTTGTATACTATGTGCTATT+AGG | + | chr4.1:11448629-11448648 | MS.gene47929:CDS | 30.0% |
| ! | GTTCTTTTCTTTGCTTATGT+TGG | + | chr4.1:11447792-11447811 | MS.gene47929:CDS | 30.0% |
| AAACTACGGAAAATCTGTCA+TGG | + | chr4.1:11446864-11446883 | MS.gene47929:CDS | 35.0% | |
| AAAGGAACTCCCCATAATTT+AGG | - | chr4.1:11448506-11448525 | None:intergenic | 35.0% | |
| AATTTAGGCTTCTTTGCCAT+TGG | - | chr4.1:11448491-11448510 | None:intergenic | 35.0% | |
| ACAAAGTAGAAATCGACATG+AGG | - | chr4.1:11448244-11448263 | None:intergenic | 35.0% | |
| ACAGAAGACAGATAACAAAG+CGG | - | chr4.1:11447124-11447143 | None:intergenic | 35.0% | |
| ATAGATAAAGAAGGTAGCCA+AGG | - | chr4.1:11448533-11448552 | None:intergenic | 35.0% | |
| ATTGAGCCAATAAGACCAAT+AGG | - | chr4.1:11447873-11447892 | None:intergenic | 35.0% | |
| CATAACATGAACCCTGATTA+TGG | + | chr4.1:11447555-11447574 | MS.gene47929:CDS | 35.0% | |
| CGTAAACTGAGAATAGTTCT+CGG | - | chr4.1:11447736-11447755 | None:intergenic | 35.0% | |
| CTTCTCTTCATAGTAATTGC+TGG | + | chr4.1:11447693-11447712 | MS.gene47929:CDS | 35.0% | |
| CTTTGATGCAGTTTCAACAA+TGG | + | chr4.1:11447815-11447834 | MS.gene47929:CDS | 35.0% | |
| GATAAGAGTAAACATAGCAG+TGG | + | chr4.1:11448686-11448705 | MS.gene47929:CDS | 35.0% | |
| GCAAAGAAGCCTAAATTATG+GGG | + | chr4.1:11448494-11448513 | MS.gene47929:CDS | 35.0% | |
| GCATACTTAAAAGTTGAGCT+AGG | + | chr4.1:11447396-11447415 | MS.gene47929:CDS | 35.0% | |
| GGCAAAGAAGCCTAAATTAT+GGG | + | chr4.1:11448493-11448512 | MS.gene47929:CDS | 35.0% | |
| GTAAACTGAGAATAGTTCTC+GGG | - | chr4.1:11447735-11447754 | None:intergenic | 35.0% | |
| TAAATTATGGGGAGTTCCTT+TGG | + | chr4.1:11448505-11448524 | MS.gene47929:CDS | 35.0% | |
| TCAAAAAAACGACTTCTTCC+CGG | + | chr4.1:11446819-11446838 | MS.gene47929:CDS | 35.0% | |
| TGGCAAAGAAGCCTAAATTA+TGG | + | chr4.1:11448492-11448511 | MS.gene47929:CDS | 35.0% | |
| TTTAGTGCTGTAAATGGCAA+GGG | - | chr4.1:11447625-11447644 | None:intergenic | 35.0% | |
| ! | ATTCTCAGTTTACGCCTTTT+GGG | + | chr4.1:11447742-11447761 | MS.gene47929:CDS | 35.0% |
| ! | TATTCTCAGTTTACGCCTTT+TGG | + | chr4.1:11447741-11447760 | MS.gene47929:CDS | 35.0% |
| !! | CAATGCTTTTTGCGTATGAT+TGG | + | chr4.1:11447216-11447235 | MS.gene47929:intron | 35.0% |
| !! | GACATTCCTATTGGTCTTAT+TGG | + | chr4.1:11447864-11447883 | MS.gene47929:CDS | 35.0% |
| !! | GTGTGTCTTGTGTTGATTAT+TGG | + | chr4.1:11448353-11448372 | MS.gene47929:CDS | 35.0% |
| !! | TCTGGAATTTTTGTGCTTAC+CGG | + | chr4.1:11447036-11447055 | MS.gene47929:CDS | 35.0% |
| !! | TGCTTTGAAAGGAATGACAA+CGG | + | chr4.1:11448037-11448056 | MS.gene47929:CDS | 35.0% |
| !! | TTGTTGTCACTGTTTTGTTC+AGG | + | chr4.1:11447363-11447382 | MS.gene47929:intron | 35.0% |
| !!! | TCTTTGGCTTTTTGTTCCAA+TGG | + | chr4.1:11448472-11448491 | MS.gene47929:CDS | 35.0% |
| AAACGATCCTTCAACCGAAA+AGG | - | chr4.1:11446895-11446914 | None:intergenic | 40.0% | |
| ACCATACCATGAAACCCAAA+AGG | - | chr4.1:11447759-11447778 | None:intergenic | 40.0% | |
| AGACTTTGTGGCCTTTATAG+CGG | + | chr4.1:11447419-11447438 | MS.gene47929:CDS | 40.0% | |
| AGAGCCTTTAGTGCTGTAAA+TGG | - | chr4.1:11447631-11447650 | None:intergenic | 40.0% | |
| AGATAACAAAGCGGAGATAC+CGG | - | chr4.1:11447115-11447134 | None:intergenic | 40.0% | |
| AGATGAAGAAGACGCTGAAT+TGG | + | chr4.1:11446974-11446993 | MS.gene47929:CDS | 40.0% | |
| CAAGTGGGGTAACTACAAAA+GGG | + | chr4.1:11448312-11448331 | MS.gene47929:CDS | 40.0% | |
| CAATAGGAATGTCTCTACCA+GGG | - | chr4.1:11447857-11447876 | None:intergenic | 40.0% | |
| CCTGTCCCTAAAAACCATAA+TGG | - | chr4.1:11448449-11448468 | None:intergenic | 40.0% | |
| CGTATATAAGGTTTGCGGTT+TGG | + | chr4.1:11448594-11448613 | MS.gene47929:CDS | 40.0% | |
| CTTTAGTGCTGTAAATGGCA+AGG | - | chr4.1:11447626-11447645 | None:intergenic | 40.0% | |
| GCACTAAAAGCAACAGAGAA+AGG | - | chr4.1:11447978-11447997 | None:intergenic | 40.0% | |
| TCAAGTGGGGTAACTACAAA+AGG | + | chr4.1:11448311-11448330 | MS.gene47929:CDS | 40.0% | |
| TCATCAACAAGAGCAAACCA+AGG | - | chr4.1:11448131-11448150 | None:intergenic | 40.0% | |
| TGAGAAGCAATGGAACAAGA+TGG | + | chr4.1:11448724-11448743 | MS.gene47929:CDS | 40.0% | |
| ! | CTGTCATGGAAACACCTTTT+CGG | + | chr4.1:11446878-11446897 | MS.gene47929:CDS | 40.0% |
| ! | CTTGCCATTTACAGCACTAA+AGG | + | chr4.1:11447624-11447643 | MS.gene47929:CDS | 40.0% |
| ! | GCTCTTGTTGATGAAAGAAC+AGG | + | chr4.1:11448137-11448156 | MS.gene47929:CDS | 40.0% |
| ! | TAGTGCTGTTGGAATGGATT+GGG | + | chr4.1:11447992-11448011 | MS.gene47929:CDS | 40.0% |
| ! | TGAGGCGTTACTATTCAAGT+GGG | + | chr4.1:11448297-11448316 | MS.gene47929:CDS | 40.0% |
| ! | TTAGTGCTGTTGGAATGGAT+TGG | + | chr4.1:11447991-11448010 | MS.gene47929:CDS | 40.0% |
| !! | AGGAATGACAACGGTTTTGT+TGG | + | chr4.1:11448046-11448065 | MS.gene47929:CDS | 40.0% |
| !! | CCATTATGGTTTTTAGGGAC+AGG | + | chr4.1:11448446-11448465 | MS.gene47929:CDS | 40.0% |
| !! | TGCTTTTAGTGCTGTTGGAA+TGG | + | chr4.1:11447986-11448005 | MS.gene47929:CDS | 40.0% |
| !! | TTGTCACTGTTTTGTTCAGG+TGG | + | chr4.1:11447366-11447385 | MS.gene47929:intron | 40.0% |
| !! | TTTGGCATTGGTTCAGTTGT+CGG | + | chr4.1:11447012-11447031 | MS.gene47929:CDS | 40.0% |
| !!! | ATGACAACGGTTTTGTTGGT+TGG | + | chr4.1:11448050-11448069 | MS.gene47929:CDS | 40.0% |
| !!! | GTTTTGTTGGTTGGTTCTGT+GGG | + | chr4.1:11448059-11448078 | MS.gene47929:CDS | 40.0% |
| !!! | TCTGTTGCTTTTAGTGCTGT+TGG | + | chr4.1:11447981-11448000 | MS.gene47929:CDS | 40.0% |
| !!! | TTTACGCCTTTTGGGTTTCA+TGG | + | chr4.1:11447750-11447769 | MS.gene47929:CDS | 40.0% |
| AAAAAACGACTTCTTCCCGG+AGG | + | chr4.1:11446822-11446841 | MS.gene47929:CDS | 45.0% | |
| AACAGTGAGCATGGATGGAT+TGG | + | chr4.1:11448407-11448426 | MS.gene47929:CDS | 45.0% | |
| AACTCTTAAACGACTCCTCC+GGG | - | chr4.1:11446840-11446859 | None:intergenic | 45.0% | |
| ACAAAGGACAACACAACTGC+CGG | - | chr4.1:11447087-11447106 | None:intergenic | 45.0% | |
| AGTTGAGCTAGGAGACTTTG+TGG | + | chr4.1:11447407-11447426 | MS.gene47929:CDS | 45.0% | |
| ATACTCAAGGAGGATGTTCC+CGG | - | chr4.1:11447445-11447464 | None:intergenic | 45.0% | |
| CAACTCTTAAACGACTCCTC+CGG | - | chr4.1:11446841-11446860 | None:intergenic | 45.0% | |
| CAATGGAACAAGATGGAGCA+AGG | + | chr4.1:11448731-11448750 | MS.gene47929:CDS | 45.0% | |
| CCAATAGGAATGTCTCTACC+AGG | - | chr4.1:11447858-11447877 | None:intergenic | 45.0% | |
| CCTGGTAGAGACATTCCTAT+TGG | + | chr4.1:11447855-11447874 | MS.gene47929:CDS | 45.0% | |
| CGATGCGATGTAGTTGAAGA+CGG | - | chr4.1:11447655-11447674 | None:intergenic | 45.0% | |
| CTGAGAATAGTTCTCGGGTT+TGG | - | chr4.1:11447730-11447749 | None:intergenic | 45.0% | |
| GAAACGATCCACTGATCATG+CGG | + | chr4.1:11446918-11446937 | MS.gene47929:CDS | 45.0% | |
| GAAGAAGACGCTGAATTGGT+GGG | + | chr4.1:11446978-11446997 | MS.gene47929:CDS | 45.0% | |
| GCAGAGGGTAGCAAAATAAG+AGG | - | chr4.1:11447502-11447521 | None:intergenic | 45.0% | |
| GGAGGAGTCGTTTAAGAGTT+GGG | + | chr4.1:11446840-11446859 | MS.gene47929:CDS | 45.0% | |
| GGTCAAGATGGCCATAATCA+GGG | - | chr4.1:11447569-11447588 | None:intergenic | 45.0% | |
| GTAAATGGCAAGGGTTGTGA+TGG | - | chr4.1:11447616-11447635 | None:intergenic | 45.0% | |
| TATTGGGCTAACAGTGAGCA+TGG | + | chr4.1:11448398-11448417 | MS.gene47929:CDS | 45.0% | |
| TCAACAAGAGCAAACCAAGG+TGG | - | chr4.1:11448128-11448147 | None:intergenic | 45.0% | |
| TGAAGAAGACGCTGAATTGG+TGG | + | chr4.1:11446977-11446996 | MS.gene47929:CDS | 45.0% | |
| TGAAGAGAAGAACAAGCACG+TGG | - | chr4.1:11447683-11447702 | None:intergenic | 45.0% | |
| TGAATTGGTGGGACTTGATG+TGG | + | chr4.1:11446989-11447008 | MS.gene47929:CDS | 45.0% | |
| TGCAGTTTCAACAATGGCTG+AGG | + | chr4.1:11447821-11447840 | MS.gene47929:CDS | 45.0% | |
| TGGAGATTAAGGCTCGTAGT+GGG | + | chr4.1:11446947-11446966 | MS.gene47929:CDS | 45.0% | |
| TTCCATTGCTTCTCAACCTC+CGG | - | chr4.1:11448719-11448738 | None:intergenic | 45.0% | |
| ! | AGTTAGGGTTTTCGTTGCAG+AGG | - | chr4.1:11447518-11447537 | None:intergenic | 45.0% |
| ! | ATAAGGTTTGCGGTTTGGAC+AGG | + | chr4.1:11448599-11448618 | MS.gene47929:CDS | 45.0% |
| ! | GACTTGATGTGGTTTGGCAT+TGG | + | chr4.1:11447000-11447019 | MS.gene47929:CDS | 45.0% |
| ! | GAGGCGTTACTATTCAAGTG+GGG | + | chr4.1:11448298-11448317 | MS.gene47929:CDS | 45.0% |
| ! | GGAAACACCTTTTCGGTTGA+AGG | + | chr4.1:11446885-11446904 | MS.gene47929:CDS | 45.0% |
| ! | GTGAGGCGTTACTATTCAAG+TGG | + | chr4.1:11448296-11448315 | MS.gene47929:CDS | 45.0% |
| ! | GTTAGGGTTTTCGTTGCAGA+GGG | - | chr4.1:11447517-11447536 | None:intergenic | 45.0% |
| ! | TAAGGTTTGCGGTTTGGACA+GGG | + | chr4.1:11448600-11448619 | MS.gene47929:CDS | 45.0% |
| ! | TTTTGTGCTTACCGGACTTG+AGG | + | chr4.1:11447044-11447063 | MS.gene47929:CDS | 45.0% |
| !! | ACATAGCAGTGGTTCTGATC+CGG | + | chr4.1:11448697-11448716 | MS.gene47929:CDS | 45.0% |
| !! | AGTTGATGGAGTACGGAAGA+GGG | + | chr4.1:11446786-11446805 | MS.gene47929:CDS | 45.0% |
| !! | CTGTTACACAGAGTTTGCTG+TGG | + | chr4.1:11447140-11447159 | MS.gene47929:CDS | 45.0% |
| !! | GCTTGTAGCCTTAGCACTTT+TGG | + | chr4.1:11448274-11448293 | MS.gene47929:CDS | 45.0% |
| !! | TAGCCTTAGCACTTTTGGTG+AGG | + | chr4.1:11448279-11448298 | MS.gene47929:CDS | 45.0% |
| !! | TGGCAACAGTTGATGGAGTA+CGG | + | chr4.1:11446779-11446798 | MS.gene47929:CDS | 45.0% |
| !! | TTGGCATTGGTTCAGTTGTC+GGG | + | chr4.1:11447013-11447032 | MS.gene47929:CDS | 45.0% |
| !! | TTTTAGGGACAGGTGCTCTT+TGG | + | chr4.1:11448456-11448475 | MS.gene47929:CDS | 45.0% |
| !!! | GCCTTTTGGGTTTCATGGTA+TGG | + | chr4.1:11447755-11447774 | MS.gene47929:CDS | 45.0% |
| !!! | GGTTTTGTTGGTTGGTTCTG+TGG | + | chr4.1:11448058-11448077 | MS.gene47929:CDS | 45.0% |
| AGAGGTCCATGATCGTGCTA+CGG | - | chr4.1:11447484-11447503 | None:intergenic | 50.0% | |
| ATCCGGAGGTTGAGAAGCAA+TGG | + | chr4.1:11448714-11448733 | MS.gene47929:CDS | 50.0% | |
| CAACAGCAACAGGGTCAAGA+TGG | - | chr4.1:11447581-11447600 | None:intergenic | 50.0% | |
| CGGAGGAGTCGTTTAAGAGT+TGG | + | chr4.1:11446839-11446858 | MS.gene47929:CDS | 50.0% | |
| GAAGGTAGCCAAGGAACCAA+AGG | - | chr4.1:11448524-11448543 | None:intergenic | 50.0% | |
| GCTGAGGAAACTAAGAACCC+TGG | + | chr4.1:11447837-11447856 | MS.gene47929:CDS | 50.0% | |
| GCTGTGGAAATACCTGTTGC+AGG | + | chr4.1:11447156-11447175 | MS.gene47929:CDS | 50.0% | |
| GGGTCAAGATGGCCATAATC+AGG | - | chr4.1:11447570-11447589 | None:intergenic | 50.0% | |
| GTACTCACATGATGCCACCT+TGG | + | chr4.1:11448111-11448130 | MS.gene47929:CDS | 50.0% | |
| GTGGAGATTAAGGCTCGTAG+TGG | + | chr4.1:11446946-11446965 | MS.gene47929:CDS | 50.0% | |
| GTGTTGTCCTTTGTCGTCTC+CGG | + | chr4.1:11447093-11447112 | MS.gene47929:CDS | 50.0% | |
| TGAGGACCACAACAGCAACA+GGG | - | chr4.1:11447590-11447609 | None:intergenic | 50.0% | |
| TGGTGGGACTTGATGTGGTT+TGG | + | chr4.1:11446994-11447013 | MS.gene47929:CDS | 50.0% | |
| TTTGTGGCCTTTATAGCGGC+CGG | + | chr4.1:11447423-11447442 | MS.gene47929:CDS | 50.0% | |
| ! | ATTGGTTCAGTTGTCGGGTC+TGG | + | chr4.1:11447018-11447037 | MS.gene47929:CDS | 50.0% |
| ! | GTTGATGGAGTACGGAAGAG+GGG | + | chr4.1:11446787-11446806 | MS.gene47929:CDS | 50.0% |
| ! | TCTTGACCCTGTTGCTGTTG+TGG | + | chr4.1:11447581-11447600 | MS.gene47929:CDS | 50.0% |
| !! | ACGCCTCACCAAAAGTGCTA+AGG | - | chr4.1:11448285-11448304 | None:intergenic | 50.0% |
| !! | CAGTTGATGGAGTACGGAAG+AGG | + | chr4.1:11446785-11446804 | MS.gene47929:CDS | 50.0% |
| ATCCACTGATCATGCGGAGC+TGG | + | chr4.1:11446924-11446943 | MS.gene47929:CDS | 55.0% | |
| CAAGGGTTGTGATGGCTGTG+AGG | - | chr4.1:11447608-11447627 | None:intergenic | 55.0% | |
| GATGTTCCCGGCCGCTATAA+AGG | - | chr4.1:11447433-11447452 | None:intergenic | 55.0% | |
| GCTTACCGGACTTGAGGCTA+GGG | + | chr4.1:11447050-11447069 | MS.gene47929:CDS | 55.0% | |
| GGAGATACCGGAGACGACAA+AGG | - | chr4.1:11447103-11447122 | None:intergenic | 55.0% | |
| GGGCTAACAGTGAGCATGGA+TGG | + | chr4.1:11448402-11448421 | MS.gene47929:CDS | 55.0% | |
| GTGAGGACCACAACAGCAAC+AGG | - | chr4.1:11447591-11447610 | None:intergenic | 55.0% | |
| TGCGGAGCTGGTGGAGATTA+AGG | + | chr4.1:11446936-11446955 | MS.gene47929:CDS | 55.0% | |
| TGCTTACCGGACTTGAGGCT+AGG | + | chr4.1:11447049-11447068 | MS.gene47929:CDS | 55.0% | |
| TTGCTCCCTAGCCTCAAGTC+CGG | - | chr4.1:11447058-11447077 | None:intergenic | 55.0% | |
| TTGTGGCCTTTATAGCGGCC+GGG | + | chr4.1:11447424-11447443 | MS.gene47929:CDS | 55.0% | |
| ! | GGGGAGTTCCTTTGGTTCCT+TGG | + | chr4.1:11448513-11448532 | MS.gene47929:CDS | 55.0% |
| !! | CAAGATGGAGCAAGGTGCTG+TGG | + | chr4.1:11448739-11448758 | MS.gene47929:CDS | 55.0% |
| !! | TAGCAGTGGTTCTGATCCGG+AGG | + | chr4.1:11448700-11448719 | MS.gene47929:CDS | 55.0% |
| CACCAGCTCCGCATGATCAG+TGG | - | chr4.1:11446929-11446948 | None:intergenic | 60.0% | |
| CACTGATCATGCGGAGCTGG+TGG | + | chr4.1:11446927-11446946 | MS.gene47929:CDS | 60.0% | |
| CTTGAGGCTAGGGAGCAAGC+AGG | + | chr4.1:11447060-11447079 | MS.gene47929:CDS | 60.0% | |
| GGTCCATGATCGTGCTACGG+CGG | - | chr4.1:11447481-11447500 | None:intergenic | 60.0% | |
| ACGCCGCCGTAGCACGATCA+TGG | + | chr4.1:11447475-11447494 | MS.gene47929:CDS | 65.0% | |
| GGCTAGGGAGCAAGCAGGTC+CGG | + | chr4.1:11447065-11447084 | MS.gene47929:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 11446778 | 11448796 | 11446778 | ID=MS.gene47929 |
| chr4.1 | mRNA | 11446778 | 11448796 | 11446778 | ID=MS.gene47929.t1;Parent=MS.gene47929 |
| chr4.1 | exon | 11446778 | 11447177 | 11446778 | ID=MS.gene47929.t1.exon1;Parent=MS.gene47929.t1 |
| chr4.1 | CDS | 11446778 | 11447177 | 11446778 | ID=cds.MS.gene47929.t1;Parent=MS.gene47929.t1 |
| chr4.1 | exon | 11447385 | 11448796 | 11447385 | ID=MS.gene47929.t1.exon2;Parent=MS.gene47929.t1 |
| chr4.1 | CDS | 11447385 | 11448796 | 11447385 | ID=cds.MS.gene47929.t1;Parent=MS.gene47929.t1 |
| Gene Sequence |
| Protein sequence |
