Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48490.t1 | XP_024633847.1 | 99 | 406 | 4 | 0 | 1 | 406 | 1 | 406 | 2.80E-239 | 837.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48490.t1 | G7J6B6 | 99.0 | 406 | 4 | 0 | 1 | 406 | 1 | 406 | 2.0e-239 | 837.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene48490 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene48490 | 0.805168 | 1.52E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene48490 | 0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene48490 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene48490 | 0.833267 | 5.88E-56 | -1.69E-46 |
| MS.gene052176 | MS.gene48490 | 0.821825 | 3.29E-53 | -1.69E-46 |
| MS.gene052358 | MS.gene48490 | -0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene48490 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene48490 | 0.801072 | 1.07E-48 | -1.69E-46 |
| MS.gene05415 | MS.gene48490 | 0.819804 | 9.58E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene48490 | 0.805682 | 1.19E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene48490 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene48490 | 0.828746 | 7.58E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene48490 | 0.801191 | 1.01E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene48490 | 0.834665 | 2.63E-56 | -1.69E-46 |
| MS.gene057027 | MS.gene48490 | 0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene48490 | 0.822998 | 1.75E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene48490 | 0.804163 | 2.47E-49 | -1.69E-46 |
| MS.gene059317 | MS.gene48490 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene48490 | 0.821431 | 4.05E-53 | -1.69E-46 |
| MS.gene059569 | MS.gene48490 | 0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene48490 | 0.824951 | 6.11E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene48490 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene48490 | 0.828771 | 7.47E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48490.t1 | MTR_3g101490 | 99.015 | 406 | 4 | 0 | 1 | 406 | 1 | 406 | 0.0 | 838 |
| MS.gene48490.t1 | MTR_4g086420 | 48.276 | 406 | 200 | 6 | 5 | 406 | 11 | 410 | 1.14e-128 | 377 |
| MS.gene48490.t1 | MTR_5g020710 | 23.022 | 278 | 176 | 6 | 24 | 271 | 123 | 392 | 3.69e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48490.t1 | AT5G44250 | 54.964 | 413 | 169 | 7 | 1 | 406 | 1 | 403 | 7.82e-155 | 443 |
| MS.gene48490.t1 | AT2G15695 | 46.824 | 425 | 195 | 9 | 5 | 406 | 4 | 420 | 4.42e-131 | 383 |
| MS.gene48490.t1 | AT5G44250 | 52.564 | 312 | 131 | 8 | 102 | 406 | 1 | 302 | 8.15e-104 | 310 |
| MS.gene48490.t1 | AT3G19970 | 25.263 | 285 | 175 | 9 | 11 | 267 | 152 | 426 | 1.70e-11 | 65.9 |
| MS.gene48490.t1 | AT3G19970 | 25.263 | 285 | 175 | 9 | 11 | 267 | 152 | 426 | 1.70e-11 | 65.9 |
| MS.gene48490.t1 | AT3G19970 | 25.263 | 285 | 175 | 9 | 11 | 267 | 152 | 426 | 1.70e-11 | 65.9 |
| MS.gene48490.t1 | AT3G19970 | 25.263 | 285 | 175 | 9 | 11 | 267 | 152 | 426 | 1.70e-11 | 65.9 |
| MS.gene48490.t1 | AT3G19970 | 25.263 | 285 | 175 | 9 | 11 | 267 | 152 | 426 | 1.70e-11 | 65.9 |
Find 93 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTAAAGACTGTATTTC+TGG | 0.115235 | 3.1:+80585133 | MS.gene48490:CDS |
| TTTCCTTTGTTCCAGATAAT+TGG | 0.211588 | 3.1:+80584571 | MS.gene48490:intron |
| GCAAGAATTGTGGCTTTATC+AGG | 0.230117 | 3.1:-80583763 | None:intergenic |
| TGCAAAAGCTTGTATGTTAA+AGG | 0.287646 | 3.1:+80584449 | MS.gene48490:CDS |
| ATCCACCAAGATTTGCTTCA+TGG | 0.298508 | 3.1:+80585242 | MS.gene48490:CDS |
| AAGATTTGAAGACGAGAAAC+TGG | 0.308852 | 3.1:+80585956 | MS.gene48490:CDS |
| AACTGCCTTGCCAAGGATTT+CGG | 0.314879 | 3.1:-80585910 | None:intergenic |
| GGTTTGGTGGTAGATATTAT+TGG | 0.332978 | 3.1:+80582422 | MS.gene48490:CDS |
| AACAACCTCAACTAGTTTCC+AGG | 0.333050 | 3.1:+80586037 | MS.gene48490:CDS |
| TTGTATGTTAAAGGTTCTTC+AGG | 0.335530 | 3.1:+80584458 | MS.gene48490:CDS |
| GTTTGGTGGTAGATATTATT+GGG | 0.338411 | 3.1:+80582423 | MS.gene48490:CDS |
| ATATGCAGGTGCTGAAAATT+AGG | 0.346502 | 3.1:+80584391 | MS.gene48490:intron |
| TCCCAATCCTCGACTGTCTT+GGG | 0.350284 | 3.1:-80586233 | None:intergenic |
| ATCAACGCAAATGGGGTTCT+TGG | 0.367337 | 3.1:+80586185 | MS.gene48490:CDS |
| ATCTCTACTCTTCTCTTGGT+TGG | 0.375249 | 3.1:+80582539 | MS.gene48490:CDS |
| CGTCCGAGCATCAACGCAAA+TGG | 0.384206 | 3.1:+80586176 | MS.gene48490:CDS |
| ATTCAAATCTGTTGAGGAAA+AGG | 0.398136 | 3.1:-80585297 | None:intergenic |
| GTCCGAGCATCAACGCAAAT+GGG | 0.398716 | 3.1:+80586177 | MS.gene48490:CDS |
| GGAGTGTGAAACACATAATA+TGG | 0.404992 | 3.1:+80584597 | MS.gene48490:CDS |
| GTGGATCTCTACTCTTCTCT+TGG | 0.413753 | 3.1:+80582535 | MS.gene48490:CDS |
| CCCCAAGACAGTCGAGGATT+GGG | 0.422191 | 3.1:+80586232 | MS.gene48490:CDS |
| AAATCACTAGTAAAATCAAC+TGG | 0.430716 | 3.1:-80585175 | None:intergenic |
| CCTTTGTTCCAGATAATTGG+TGG | 0.445347 | 3.1:+80584574 | MS.gene48490:intron |
| ATCCCAATCCTCGACTGTCT+TGG | 0.451738 | 3.1:-80586234 | None:intergenic |
| TCCCCAAGACAGTCGAGGAT+TGG | 0.456587 | 3.1:+80586231 | MS.gene48490:CDS |
| TGCGTTGATGCTCGGACGGG+TGG | 0.459759 | 3.1:-80586171 | None:intergenic |
| AAATTTGAAACAACTTCAAA+AGG | 0.460042 | 3.1:-80585517 | None:intergenic |
| AATCGCAGCGTGCAGAGTAT+TGG | 0.468481 | 3.1:+80585317 | MS.gene48490:CDS |
| TTCTTAGCTGCTTACAGTGG+TGG | 0.472881 | 3.1:-80585353 | None:intergenic |
| CAGTCGAGGATTGGGATGTC+AGG | 0.477065 | 3.1:+80586240 | MS.gene48490:CDS |
| GAATTTGTCTCCTAGTTCAA+TGG | 0.477213 | 3.1:+80586082 | MS.gene48490:CDS |
| ACCCCATTTGCGTTGATGCT+CGG | 0.485276 | 3.1:-80586179 | None:intergenic |
| GCAATCCATGAAGCAAATCT+TGG | 0.486555 | 3.1:-80585247 | None:intergenic |
| TTCAAATCTGTTGAGGAAAA+GGG | 0.487836 | 3.1:-80585296 | None:intergenic |
| GACGAGAAACTGGGCATAGA+GGG | 0.489209 | 3.1:+80585966 | MS.gene48490:CDS |
| ATTGCCAATGGCATAGCATC+TGG | 0.497699 | 3.1:+80585265 | MS.gene48490:CDS |
| CCTTGGCGGAGATGTCAAAC+TGG | 0.512208 | 3.1:+80585558 | MS.gene48490:CDS |
| CTTTGTTCCAGATAATTGGT+GGG | 0.515096 | 3.1:+80584575 | MS.gene48490:intron |
| CATTTGCGTTGATGCTCGGA+CGG | 0.515549 | 3.1:-80586175 | None:intergenic |
| GCTTTCCTCAGCTCAGAGAA+AGG | 0.520012 | 3.1:-80586011 | None:intergenic |
| AGACGAGAAACTGGGCATAG+AGG | 0.521887 | 3.1:+80585965 | MS.gene48490:CDS |
| ATATTATTGGGGAAGAAGAA+AGG | 0.523616 | 3.1:+80582435 | MS.gene48490:CDS |
| TCGTAATACTCCATTGAACT+AGG | 0.526668 | 3.1:-80586092 | None:intergenic |
| GCTGCTATCACCGAAATCCT+TGG | 0.528163 | 3.1:+80585900 | MS.gene48490:CDS |
| ATTTGCGTTGATGCTCGGAC+GGG | 0.528746 | 3.1:-80586174 | None:intergenic |
| ACTAGTAAAATCAACTGGAC+TGG | 0.531480 | 3.1:-80585170 | None:intergenic |
| CAGGACTATTATCTGGTACA+AGG | 0.538017 | 3.1:+80586279 | MS.gene48490:CDS |
| GGATAGTTGTGGTGTTTGCA+TGG | 0.544147 | 3.1:+80582479 | MS.gene48490:CDS |
| TTTGTTCCAGATAATTGGTG+GGG | 0.545379 | 3.1:+80584576 | MS.gene48490:intron |
| ATAGCAGCTTCATATTCATC+CGG | 0.551859 | 3.1:-80585885 | None:intergenic |
| TTTCATCGACTAAAAGACCT+TGG | 0.551915 | 3.1:+80585541 | MS.gene48490:CDS |
| CAAGAATTGTGGCTTTATCA+GGG | 0.554383 | 3.1:-80583762 | None:intergenic |
| AAATACAGTCTTTAACAAGC+TGG | 0.554977 | 3.1:-80585129 | None:intergenic |
| TTTGCTTCATGGATTGCCAA+TGG | 0.557728 | 3.1:+80585253 | MS.gene48490:CDS |
| CCCAATCCTCGACTGTCTTG+GGG | 0.558714 | 3.1:-80586232 | None:intergenic |
| ATCCATGAAGCAAATCTTGG+TGG | 0.558816 | 3.1:-80585244 | None:intergenic |
| GAGATGTCAAACTGGTAAAG+TGG | 0.559575 | 3.1:+80585566 | MS.gene48490:CDS |
| TATTACGATGATAAAGATGT+TGG | 0.560606 | 3.1:+80586107 | MS.gene48490:CDS |
| ACATATTGAGAAATTGAGAA+TGG | 0.561373 | 3.1:-80582576 | None:intergenic |
| CATCGACTAAAAGACCTTGG+CGG | 0.561390 | 3.1:+80585544 | MS.gene48490:CDS |
| AAAGCATTTGATGAGATATG+TGG | 0.562448 | 3.1:+80582516 | MS.gene48490:CDS |
| AAGACCAGATGCTATGCCAT+TGG | 0.564508 | 3.1:-80585269 | None:intergenic |
| TCTGTAGCAGATGAACGAAA+AGG | 0.568832 | 3.1:+80586131 | MS.gene48490:CDS |
| AATATCAACAGCAAGAATTG+TGG | 0.572618 | 3.1:-80583773 | None:intergenic |
| ACAACCTCAACTAGTTTCCA+GGG | 0.574936 | 3.1:+80586038 | MS.gene48490:CDS |
| TAAAATGCATCCGACGCTCA+AGG | 0.583132 | 3.1:+80586324 | MS.gene48490:CDS |
| GCGTTGATGCTCGGACGGGT+GGG | 0.583643 | 3.1:-80586170 | None:intergenic |
| CTAGGAGACAAATTCTCACT+CGG | 0.584986 | 3.1:-80586074 | None:intergenic |
| TAGATTGTGAGAAAGCGAAT+GGG | 0.585596 | 3.1:+80582458 | MS.gene48490:CDS |
| TGGAGTTCCTCTCCTCATGT+AGG | 0.587941 | 3.1:+80585586 | MS.gene48490:CDS |
| GTAGATTGTGAGAAAGCGAA+TGG | 0.588482 | 3.1:+80582457 | MS.gene48490:CDS |
| TATTCTAAATGAACTAGTTG+AGG | 0.588736 | 3.1:+80583792 | MS.gene48490:CDS |
| AAATTGCAACTGCCTTGCCA+AGG | 0.588829 | 3.1:-80585917 | None:intergenic |
| CCAGTTTGACATCTCCGCCA+AGG | 0.589341 | 3.1:-80585558 | None:intergenic |
| TCGGAGCAACAGCAAAACCC+TGG | 0.590217 | 3.1:-80586055 | None:intergenic |
| TGTGACACTTTCAAAACAGA+TGG | 0.600394 | 3.1:-80585220 | None:intergenic |
| AGATTTGAAGACGAGAAACT+GGG | 0.620171 | 3.1:+80585957 | MS.gene48490:CDS |
| GCTGCGATTCAAATCTGTTG+AGG | 0.620937 | 3.1:-80585303 | None:intergenic |
| CTGATCCTTTCTCTGAGCTG+AGG | 0.621628 | 3.1:+80586006 | MS.gene48490:CDS |
| TATCACCGAAATCCTTGGCA+AGG | 0.640870 | 3.1:+80585905 | MS.gene48490:CDS |
| AATGTTACAACCTTGAGCGT+CGG | 0.641835 | 3.1:-80586334 | None:intergenic |
| TCCGAGCATCAACGCAAATG+GGG | 0.642055 | 3.1:+80586178 | MS.gene48490:CDS |
| TTGTGTCCCCAAGACAGTCG+AGG | 0.643365 | 3.1:+80586226 | MS.gene48490:CDS |
| GTGACACTTTCAAAACAGAT+GGG | 0.646924 | 3.1:-80585219 | None:intergenic |
| TTTGGTGGTAGATATTATTG+GGG | 0.651148 | 3.1:+80582424 | MS.gene48490:CDS |
| ATACTGACCTACATGAGGAG+AGG | 0.654599 | 3.1:-80585593 | None:intergenic |
| GAAGAAGAAGGAAAATGTGG+GGG | 0.662580 | 3.1:+80582401 | None:intergenic |
| GGAAGAAGAAGGAAAATGTG+GGG | 0.667071 | 3.1:+80582400 | None:intergenic |
| AAAACCCTGGAAACTAGTTG+AGG | 0.669085 | 3.1:-80586042 | None:intergenic |
| TCAAGATACTGACCTACATG+AGG | 0.682155 | 3.1:-80585598 | None:intergenic |
| GAAAGCGAATGGGATAGTTG+TGG | 0.713351 | 3.1:+80582468 | MS.gene48490:CDS |
| GACTATTATCTGGTACAAGG+AGG | 0.724614 | 3.1:+80586282 | MS.gene48490:CDS |
| GTTTGCATGGATGTCAAGTG+AGG | 0.735962 | 3.1:+80582492 | MS.gene48490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGTAAGTATAGATTAAT+TGG | + | chr3.1:80584061-80584080 | MS.gene48490:intron | 15.0% |
| !! | TTAACATTTATATTATTTGC+AGG | + | chr3.1:80583734-80583753 | MS.gene48490:intron | 15.0% |
| !!! | AAATTTTACTTGAATATGTT+AGG | + | chr3.1:80585846-80585865 | MS.gene48490:intron | 15.0% |
| !!! | TAGTATTTTATTTGTGTTTT+AGG | + | chr3.1:80584967-80584986 | MS.gene48490:intron | 15.0% |
| !!! | TTTATTTACATTTTTACCAT+TGG | + | chr3.1:80584512-80584531 | MS.gene48490:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTGAAC+AGG | - | chr3.1:80585039-80585058 | None:intergenic | 15.0% |
| !! | ATCATTTAAATTATGAAGCA+TGG | - | chr3.1:80584789-80584808 | None:intergenic | 20.0% |
| !! | CAAATTTAGCTAAAAATGTT+AGG | - | chr3.1:80583584-80583603 | None:intergenic | 20.0% |
| !! | TGTCCAAAATAATTAGTAAA+GGG | - | chr3.1:80584820-80584839 | None:intergenic | 20.0% |
| !! | TGTGCACATTAATTTAAATA+GGG | + | chr3.1:80583518-80583537 | MS.gene48490:intron | 20.0% |
| !! | TTGTCCAAAATAATTAGTAA+AGG | - | chr3.1:80584821-80584840 | None:intergenic | 20.0% |
| !! | TTGTGCACATTAATTTAAAT+AGG | + | chr3.1:80583517-80583536 | MS.gene48490:intron | 20.0% |
| !!! | AAATTTGAAACAACTTCAAA+AGG | - | chr3.1:80585520-80585539 | None:intergenic | 20.0% |
| !!! | AACTATATGAGCAATTTTTT+TGG | - | chr3.1:80584098-80584117 | None:intergenic | 20.0% |
| !!! | ACATTTTTTAAAATGTCCTT+CGG | - | chr3.1:80583557-80583576 | None:intergenic | 20.0% |
| !!! | ATGAACGAATGTAATTTTTA+TGG | + | chr3.1:80585795-80585814 | MS.gene48490:intron | 20.0% |
| !!! | CAATCTAAAGTACAAAATTA+CGG | - | chr3.1:80585686-80585705 | None:intergenic | 20.0% |
| !!! | TTTAGACATTTTCTAATCAA+CGG | - | chr3.1:80583996-80584015 | None:intergenic | 20.0% |
| !!! | TTTCCCTTTACTAATTATTT+TGG | + | chr3.1:80584814-80584833 | MS.gene48490:intron | 20.0% |
| ! | AAATCACTAGTAAAATCAAC+TGG | - | chr3.1:80585178-80585197 | None:intergenic | 25.0% |
| ! | AAATCCATGTCTTGTAAAAT+TGG | - | chr3.1:80582698-80582717 | None:intergenic | 25.0% |
| ! | AAATTGAAGCAAAAGAGAAT+TGG | + | chr3.1:80582837-80582856 | MS.gene48490:intron | 25.0% |
| ! | AATTTACACAAAAATGAGTC+TGG | + | chr3.1:80583925-80583944 | MS.gene48490:intron | 25.0% |
| ! | ACATATTGAGAAATTGAGAA+TGG | - | chr3.1:80582579-80582598 | None:intergenic | 25.0% |
| ! | AGAAAAAGATGCAAAAACAA+TGG | - | chr3.1:80584424-80584443 | None:intergenic | 25.0% |
| ! | ATCCTCAAATAAATTGCTAA+AGG | - | chr3.1:80584634-80584653 | None:intergenic | 25.0% |
| ! | ATGTTAAGTTCAATATCCAT+AGG | - | chr3.1:80583721-80583740 | None:intergenic | 25.0% |
| ! | ATTAGTCAACATAAAGACAT+AGG | - | chr3.1:80583424-80583443 | None:intergenic | 25.0% |
| ! | CAAACATAAAACAATTATCC+TGG | - | chr3.1:80582974-80582993 | None:intergenic | 25.0% |
| ! | GAAAAAGATGCAAAAACAAT+GGG | - | chr3.1:80584423-80584442 | None:intergenic | 25.0% |
| ! | GCTTATTAACTAAATAAGCT+AGG | - | chr3.1:80583625-80583644 | None:intergenic | 25.0% |
| ! | TAATTATGCATAATAGTGCA+CGG | + | chr3.1:80585622-80585641 | MS.gene48490:intron | 25.0% |
| ! | TATAAAGAAGGCTGTTAAAT+AGG | - | chr3.1:80583366-80583385 | None:intergenic | 25.0% |
| ! | TATTACGATGATAAAGATGT+TGG | + | chr3.1:80586107-80586126 | MS.gene48490:CDS | 25.0% |
| ! | TATTCTAAATGAACTAGTTG+AGG | + | chr3.1:80583792-80583811 | MS.gene48490:CDS | 25.0% |
| ! | TCTGAACAAAAAATGAGATA+CGG | - | chr3.1:80585481-80585500 | None:intergenic | 25.0% |
| ! | TGTTAAGTTCAATATCCATA+GGG | - | chr3.1:80583720-80583739 | None:intergenic | 25.0% |
| ! | TTCAAAAACCTATAAAGCAA+AGG | - | chr3.1:80583058-80583077 | None:intergenic | 25.0% |
| ! | TTTAAATTATGAAGCATGGA+TGG | - | chr3.1:80584785-80584804 | None:intergenic | 25.0% |
| !! | AAAAAATGGAGGTAATTTGT+TGG | - | chr3.1:80585400-80585419 | None:intergenic | 25.0% |
| !! | ATGCATTTTATAGGATTGAA+AGG | - | chr3.1:80586314-80586333 | None:intergenic | 25.0% |
| !! | ATGTCTTTATGTTGACTAAT+GGG | + | chr3.1:80583424-80583443 | MS.gene48490:intron | 25.0% |
| !! | CACATAATATGGTATGTTTT+CGG | + | chr3.1:80584608-80584627 | MS.gene48490:intron | 25.0% |
| !! | TATGTCTTTATGTTGACTAA+TGG | + | chr3.1:80583423-80583442 | MS.gene48490:intron | 25.0% |
| !! | TTAGACATTTTCTAATCAAC+GGG | - | chr3.1:80583995-80584014 | None:intergenic | 25.0% |
| !!! | AAATTACCTCCATTTTTTTG+AGG | + | chr3.1:80585402-80585421 | MS.gene48490:intron | 25.0% |
| !!! | AATTTTTGAAAAGCATCACT+TGG | + | chr3.1:80583332-80583351 | MS.gene48490:intron | 25.0% |
| !!! | AGTTGATTTTACTAGTGATT+TGG | + | chr3.1:80585177-80585196 | MS.gene48490:CDS | 25.0% |
| !!! | ATTGTTTTTGCATCTTTTTC+TGG | + | chr3.1:80584423-80584442 | MS.gene48490:CDS | 25.0% |
| !!! | ATTTGCTTTTAAGAAATCCT+TGG | + | chr3.1:80583599-80583618 | MS.gene48490:intron | 25.0% |
| !!! | CATTTTTTAAAATGTCCTTC+GGG | - | chr3.1:80583556-80583575 | None:intergenic | 25.0% |
| !!! | GTTGATTTTACTAGTGATTT+GGG | + | chr3.1:80585178-80585197 | MS.gene48490:CDS | 25.0% |
| !!! | TCTTCAGGTATTTTAACTAT+AGG | + | chr3.1:80584473-80584492 | MS.gene48490:intron | 25.0% |
| !!! | TTATAGCAAGCCTTTTAAAA+AGG | - | chr3.1:80583313-80583332 | None:intergenic | 25.0% |
| AAAAATGCAGGACTATTATC+TGG | + | chr3.1:80586272-80586291 | MS.gene48490:CDS | 30.0% | |
| AAATACAGTCTTTAACAAGC+TGG | - | chr3.1:80585132-80585151 | None:intergenic | 30.0% | |
| AACTTCATGAAGCTAATATG+CGG | - | chr3.1:80583009-80583028 | None:intergenic | 30.0% | |
| AAGATACCTCAAAAAAATGG+AGG | - | chr3.1:80585411-80585430 | None:intergenic | 30.0% | |
| AATATCAACAGCAAGAATTG+TGG | - | chr3.1:80583776-80583795 | None:intergenic | 30.0% | |
| AGACAATACTATTTGTTTGC+TGG | + | chr3.1:80583080-80583099 | MS.gene48490:intron | 30.0% | |
| ATATTATTGGGGAAGAAGAA+AGG | + | chr3.1:80582435-80582454 | MS.gene48490:CDS | 30.0% | |
| ATGATTCGTTGTGCAAAAAT+TGG | + | chr3.1:80585751-80585770 | MS.gene48490:intron | 30.0% | |
| ATTCAAATCTGTTGAGGAAA+AGG | - | chr3.1:80585300-80585319 | None:intergenic | 30.0% | |
| CATAAAACAATTATCCTGGA+TGG | - | chr3.1:80582970-80582989 | None:intergenic | 30.0% | |
| CTGAACAAAAAATGAGATAC+GGG | - | chr3.1:80585480-80585499 | None:intergenic | 30.0% | |
| CTTATTTAGTTAATAAGCCG+AGG | + | chr3.1:80583627-80583646 | MS.gene48490:intron | 30.0% | |
| CTTGTTAAAGACTGTATTTC+TGG | + | chr3.1:80585133-80585152 | MS.gene48490:CDS | 30.0% | |
| GTCAAGATACCTCAAAAAAA+TGG | - | chr3.1:80585414-80585433 | None:intergenic | 30.0% | |
| TAGCTTCATGAAGTTTGATT+AGG | + | chr3.1:80583014-80583033 | MS.gene48490:intron | 30.0% | |
| TAGTCTCTATACTGTATAGA+TGG | - | chr3.1:80583180-80583199 | None:intergenic | 30.0% | |
| TAGTTGTAAATGCCTGATAA+GGG | + | chr3.1:80582641-80582660 | MS.gene48490:intron | 30.0% | |
| TCATGAAGTTTGATTAGGAT+TGG | + | chr3.1:80583019-80583038 | MS.gene48490:intron | 30.0% | |
| TCATGTTTATATGTGAAACG+AGG | + | chr3.1:80584734-80584753 | MS.gene48490:intron | 30.0% | |
| TCTTGACATATCTGCTTATT+AGG | + | chr3.1:80585427-80585446 | MS.gene48490:intron | 30.0% | |
| TGCAAAAGCTTGTATGTTAA+AGG | + | chr3.1:80584449-80584468 | MS.gene48490:CDS | 30.0% | |
| TGGCTTATAACTAGAAAAAC+CGG | - | chr3.1:80584918-80584937 | None:intergenic | 30.0% | |
| TTCAAATCTGTTGAGGAAAA+GGG | - | chr3.1:80585299-80585318 | None:intergenic | 30.0% | |
| TTCGTTCATTACAATTTCCA+TGG | - | chr3.1:80585784-80585803 | None:intergenic | 30.0% | |
| TTGTATGTTAAAGGTTCTTC+AGG | + | chr3.1:80584458-80584477 | MS.gene48490:CDS | 30.0% | |
| TTTCCTTTGTTCCAGATAAT+TGG | + | chr3.1:80584571-80584590 | MS.gene48490:intron | 30.0% | |
| ! | AAAGCATTTGATGAGATATG+TGG | + | chr3.1:80582516-80582535 | MS.gene48490:CDS | 30.0% |
| ! | ACAACATGGACCTTTTTAAA+AGG | + | chr3.1:80583300-80583319 | MS.gene48490:intron | 30.0% |
| ! | ACTACCAATTTTACAAGACA+TGG | + | chr3.1:80582691-80582710 | MS.gene48490:intron | 30.0% |
| ! | CTAAGCCTTATCTTAAAACA+GGG | + | chr3.1:80583266-80583285 | MS.gene48490:intron | 30.0% |
| ! | CTTAATTTTTGTCATTGCAC+AGG | + | chr3.1:80585099-80585118 | MS.gene48490:intron | 30.0% |
| ! | GTTTGGTGGTAGATATTATT+GGG | + | chr3.1:80582423-80582442 | MS.gene48490:CDS | 30.0% |
| ! | TTTGGTGGTAGATATTATTG+GGG | + | chr3.1:80582424-80582443 | MS.gene48490:CDS | 30.0% |
| !!! | CTTCAAATCTTCTGTTTTTG+TGG | - | chr3.1:80585947-80585966 | None:intergenic | 30.0% |
| !!! | TTCGTTTATGCTAGTTTTCT+TGG | + | chr3.1:80585723-80585742 | MS.gene48490:intron | 30.0% |
| !!! | TTTTTCTAGTTATAAGCCAG+CGG | + | chr3.1:80584919-80584938 | MS.gene48490:intron | 30.0% |
| !!! | TTTTTTTGTGAACAGGAACT+TGG | - | chr3.1:80585032-80585051 | None:intergenic | 30.0% |
| AAATACTAAAATACCCCCAG+CGG | - | chr3.1:80584955-80584974 | None:intergenic | 35.0% | |
| AAATTACGGCACGAGTTATT+AGG | - | chr3.1:80585672-80585691 | None:intergenic | 35.0% | |
| AAGATTTGAAGACGAGAAAC+TGG | + | chr3.1:80585956-80585975 | MS.gene48490:CDS | 35.0% | |
| AAGTTCAATATCCATAGGGA+TGG | - | chr3.1:80583716-80583735 | None:intergenic | 35.0% | |
| ACAGTATAGAGACTATACTG+TGG | + | chr3.1:80583185-80583204 | MS.gene48490:intron | 35.0% | |
| ACTAGTAAAATCAACTGGAC+TGG | - | chr3.1:80585173-80585192 | None:intergenic | 35.0% | |
| ACTCGTATGTCTATTAGTAC+TGG | + | chr3.1:80582883-80582902 | MS.gene48490:intron | 35.0% | |
| AGACTGACTGATCTACAAAA+TGG | - | chr3.1:80583838-80583857 | None:intergenic | 35.0% | |
| AGATTTGAAGACGAGAAACT+GGG | + | chr3.1:80585957-80585976 | MS.gene48490:CDS | 35.0% | |
| AGCAAAAGAGAATTGGTGAA+TGG | + | chr3.1:80582844-80582863 | MS.gene48490:intron | 35.0% | |
| AGGTCGAATTCAAAAAATGC+AGG | + | chr3.1:80586260-80586279 | MS.gene48490:CDS | 35.0% | |
| AGTTCAATATCCATAGGGAT+GGG | - | chr3.1:80583715-80583734 | None:intergenic | 35.0% | |
| ATAGCAGCTTCATATTCATC+CGG | - | chr3.1:80585888-80585907 | None:intergenic | 35.0% | |
| ATGATTGAAGCCTGATTACA+AGG | + | chr3.1:80582931-80582950 | MS.gene48490:intron | 35.0% | |
| CACCTAAATTAACCCTTATC+AGG | - | chr3.1:80582656-80582675 | None:intergenic | 35.0% | |
| CTGATAAGGGTTAATTTAGG+TGG | + | chr3.1:80582654-80582673 | MS.gene48490:intron | 35.0% | |
| CTTTGTTCCAGATAATTGGT+GGG | + | chr3.1:80584575-80584594 | MS.gene48490:intron | 35.0% | |
| GAATTTGTCTCCTAGTTCAA+TGG | + | chr3.1:80586082-80586101 | MS.gene48490:CDS | 35.0% | |
| GCAAGGTCTTACTATAAAGA+AGG | - | chr3.1:80583378-80583397 | None:intergenic | 35.0% | |
| GGAGTGTGAAACACATAATA+TGG | + | chr3.1:80584597-80584616 | MS.gene48490:CDS | 35.0% | |
| GGCCTTTAGCAATTTATTTG+AGG | + | chr3.1:80584629-80584648 | MS.gene48490:intron | 35.0% | |
| GTAGTTGTAAATGCCTGATA+AGG | + | chr3.1:80582640-80582659 | MS.gene48490:intron | 35.0% | |
| GTATTATTCCTTACATGCCT+CGG | - | chr3.1:80583647-80583666 | None:intergenic | 35.0% | |
| GTGACACTTTCAAAACAGAT+GGG | - | chr3.1:80585222-80585241 | None:intergenic | 35.0% | |
| TAAATGACCAAAAAACCCAG+CGG | + | chr3.1:80584879-80584898 | MS.gene48490:intron | 35.0% | |
| TAACTAAATAAGCTAGGCCA+AGG | - | chr3.1:80583619-80583638 | None:intergenic | 35.0% | |
| TAAGGGTTAATTTAGGTGGA+TGG | + | chr3.1:80582658-80582677 | MS.gene48490:intron | 35.0% | |
| TAGATTGTGAGAAAGCGAAT+GGG | + | chr3.1:80582458-80582477 | MS.gene48490:CDS | 35.0% | |
| TCAGTGTTCTACAGTTTCTA+CGG | + | chr3.1:80584237-80584256 | MS.gene48490:intron | 35.0% | |
| TCGTAATACTCCATTGAACT+AGG | - | chr3.1:80586095-80586114 | None:intergenic | 35.0% | |
| TGACTGATCTACAAAATGGA+AGG | - | chr3.1:80583834-80583853 | None:intergenic | 35.0% | |
| TGCCTGATAAGGGTTAATTT+AGG | + | chr3.1:80582651-80582670 | MS.gene48490:intron | 35.0% | |
| TGTGACACTTTCAAAACAGA+TGG | - | chr3.1:80585223-80585242 | None:intergenic | 35.0% | |
| TTACACATCTCACTGTATAC+CGG | + | chr3.1:80583212-80583231 | MS.gene48490:intron | 35.0% | |
| TTTGTTCCAGATAATTGGTG+GGG | + | chr3.1:80584576-80584595 | MS.gene48490:intron | 35.0% | |
| ! | ATTTTCCTTGCATGCTAAAG+TGG | + | chr3.1:80583882-80583901 | MS.gene48490:intron | 35.0% |
| ! | CTGCTATTTGTTCAATATGC+AGG | + | chr3.1:80584377-80584396 | MS.gene48490:intron | 35.0% |
| ! | GCTAAGCCTTATCTTAAAAC+AGG | + | chr3.1:80583265-80583284 | MS.gene48490:intron | 35.0% |
| ! | GTTTTTGCATCTTTTTCTGG+TGG | + | chr3.1:80584426-80584445 | MS.gene48490:CDS | 35.0% |
| ! | TCTATTAGTACTGGACATTG+TGG | + | chr3.1:80582892-80582911 | MS.gene48490:intron | 35.0% |
| ! | TTTCATCGACTAAAAGACCT+TGG | + | chr3.1:80585541-80585560 | MS.gene48490:CDS | 35.0% |
| !! | ATATGCAGGTGCTGAAAATT+AGG | + | chr3.1:80584391-80584410 | MS.gene48490:intron | 35.0% |
| !! | CAAGAATTGTGGCTTTATCA+GGG | - | chr3.1:80583765-80583784 | None:intergenic | 35.0% |
| !! | GGGTTGGTTTATTTACAACA+TGG | + | chr3.1:80583286-80583305 | MS.gene48490:intron | 35.0% |
| !! | GGTTTGGTGGTAGATATTAT+TGG | + | chr3.1:80582422-80582441 | MS.gene48490:CDS | 35.0% |
| !!! | ACCAACCCTGTTTTAAGATA+AGG | - | chr3.1:80583274-80583293 | None:intergenic | 35.0% |
| !!! | CAAATCTTCTGTTTTTGTGG+CGG | - | chr3.1:80585944-80585963 | None:intergenic | 35.0% |
| AAAACCCTGGAAACTAGTTG+AGG | - | chr3.1:80586045-80586064 | None:intergenic | 40.0% | |
| ACCTTGCCTATCTCCAAATA+GGG | + | chr3.1:80583391-80583410 | MS.gene48490:intron | 40.0% | |
| ACTGGACATTGTGGTTTACT+GGG | + | chr3.1:80582901-80582920 | MS.gene48490:intron | 40.0% | |
| ACTGTATACCGGATGATTAC+GGG | + | chr3.1:80583223-80583242 | MS.gene48490:intron | 40.0% | |
| AGAGCATAGTTAGTACAGCT+AGG | + | chr3.1:80584036-80584055 | MS.gene48490:intron | 40.0% | |
| ATAGACCACTTTAGCATGCA+AGG | - | chr3.1:80583890-80583909 | None:intergenic | 40.0% | |
| ATCCATGAAGCAAATCTTGG+TGG | - | chr3.1:80585247-80585266 | None:intergenic | 40.0% | |
| ATCTCTACTCTTCTCTTGGT+TGG | + | chr3.1:80582539-80582558 | MS.gene48490:CDS | 40.0% | |
| CAAAAATTGGTGTGCAACCA+TGG | + | chr3.1:80585764-80585783 | MS.gene48490:intron | 40.0% | |
| CACTGTATACCGGATGATTA+CGG | + | chr3.1:80583222-80583241 | MS.gene48490:intron | 40.0% | |
| CAGGACTATTATCTGGTACA+AGG | + | chr3.1:80586279-80586298 | MS.gene48490:CDS | 40.0% | |
| CAGTCAGTCTGAATTCAAGT+CGG | + | chr3.1:80583848-80583867 | MS.gene48490:intron | 40.0% | |
| CAGTTGTGCCTTTGCTTTAT+AGG | + | chr3.1:80583047-80583066 | MS.gene48490:intron | 40.0% | |
| CCAGAATTAAGAGCTCTTAC+AGG | - | chr3.1:80584538-80584557 | None:intergenic | 40.0% | |
| CCTGTAAGAGCTCTTAATTC+TGG | + | chr3.1:80584535-80584554 | MS.gene48490:intron | 40.0% | |
| CCTTTGTTCCAGATAATTGG+TGG | + | chr3.1:80584574-80584593 | MS.gene48490:intron | 40.0% | |
| CTAATATGCGGTGGTTTCTT+CGG | - | chr3.1:80582997-80583016 | None:intergenic | 40.0% | |
| CTAATGCCCTATTTGGAGAT+AGG | - | chr3.1:80583400-80583419 | None:intergenic | 40.0% | |
| CTAGGAGACAAATTCTCACT+CGG | - | chr3.1:80586077-80586096 | None:intergenic | 40.0% | |
| GACTATTATCTGGTACAAGG+AGG | + | chr3.1:80586282-80586301 | MS.gene48490:CDS | 40.0% | |
| GAGATGTCAAACTGGTAAAG+TGG | + | chr3.1:80585566-80585585 | MS.gene48490:CDS | 40.0% | |
| GCAATCCATGAAGCAAATCT+TGG | - | chr3.1:80585250-80585269 | None:intergenic | 40.0% | |
| GCCTTATCTTAAAACAGGGT+TGG | + | chr3.1:80583270-80583289 | MS.gene48490:intron | 40.0% | |
| GTAGATTGTGAGAAAGCGAA+TGG | + | chr3.1:80582457-80582476 | MS.gene48490:CDS | 40.0% | |
| GTATTCTTAGCTGCTTACAG+TGG | - | chr3.1:80585359-80585378 | None:intergenic | 40.0% | |
| TACTGGACATTGTGGTTTAC+TGG | + | chr3.1:80582900-80582919 | MS.gene48490:intron | 40.0% | |
| TATAGTAGTTGTGCTTGTGC+AGG | - | chr3.1:80584144-80584163 | None:intergenic | 40.0% | |
| TCAAGATACTGACCTACATG+AGG | - | chr3.1:80585601-80585620 | None:intergenic | 40.0% | |
| TCTGTAGCAGATGAACGAAA+AGG | + | chr3.1:80586131-80586150 | MS.gene48490:CDS | 40.0% | |
| TTAATAAGCCGAGGCATGTA+AGG | + | chr3.1:80583636-80583655 | MS.gene48490:intron | 40.0% | |
| TTCATGAAGCTAATATGCGG+TGG | - | chr3.1:80583006-80583025 | None:intergenic | 40.0% | |
| TTTATGGCATGCATGTACAG+AGG | + | chr3.1:80585811-80585830 | MS.gene48490:intron | 40.0% | |
| ! | AACAACCTCAACTAGTTTCC+AGG | + | chr3.1:80586037-80586056 | MS.gene48490:CDS | 40.0% |
| ! | AACAGACATCGAGTTGCAAT+TGG | - | chr3.1:80583137-80583156 | None:intergenic | 40.0% |
| ! | ACAACCTCAACTAGTTTCCA+GGG | + | chr3.1:80586038-80586057 | MS.gene48490:CDS | 40.0% |
| ! | ATCCACCAAGATTTGCTTCA+TGG | + | chr3.1:80585242-80585261 | MS.gene48490:CDS | 40.0% |
| ! | CATCGAGTTGCAATTGGTAA+TGG | - | chr3.1:80583131-80583150 | None:intergenic | 40.0% |
| ! | CCACCAATTATCTGGAACAA+AGG | - | chr3.1:80584577-80584596 | None:intergenic | 40.0% |
| ! | CTATCTCCAAATAGGGCATT+AGG | + | chr3.1:80583398-80583417 | MS.gene48490:intron | 40.0% |
| ! | CTTTTTGTTGCAGAGTATGC+AGG | + | chr3.1:80585453-80585472 | MS.gene48490:intron | 40.0% |
| ! | TTTGCTTCATGGATTGCCAA+TGG | + | chr3.1:80585253-80585272 | MS.gene48490:CDS | 40.0% |
| !! | AGGTCATTTTCGTCATCATC+CGG | + | chr3.1:80585866-80585885 | MS.gene48490:intron | 40.0% |
| !! | GCAAGAATTGTGGCTTTATC+AGG | - | chr3.1:80583766-80583785 | None:intergenic | 40.0% |
| !! | TTGGTAATGGAAAATGCCTC+TGG | - | chr3.1:80583118-80583137 | None:intergenic | 40.0% |
| AAATTGCAACTGCCTTGCCA+AGG | - | chr3.1:80585920-80585939 | None:intergenic | 45.0% | |
| AACTGCCTTGCCAAGGATTT+CGG | - | chr3.1:80585913-80585932 | None:intergenic | 45.0% | |
| AAGACCAGATGCTATGCCAT+TGG | - | chr3.1:80585272-80585291 | None:intergenic | 45.0% | |
| AGATAAGGCTTAGCCTAACG+TGG | - | chr3.1:80583259-80583278 | None:intergenic | 45.0% | |
| ATACTGACCTACATGAGGAG+AGG | - | chr3.1:80585596-80585615 | None:intergenic | 45.0% | |
| ATCAACGCAAATGGGGTTCT+TGG | + | chr3.1:80586185-80586204 | MS.gene48490:CDS | 45.0% | |
| ATGAAGCATGGATGGCAAGT+TGG | - | chr3.1:80584777-80584796 | None:intergenic | 45.0% | |
| ATTGCCAATGGCATAGCATC+TGG | + | chr3.1:80585265-80585284 | MS.gene48490:CDS | 45.0% | |
| CATAGGCCTAATGCCCTATT+TGG | - | chr3.1:80583407-80583426 | None:intergenic | 45.0% | |
| CATTTCCACCCGTAATCATC+CGG | - | chr3.1:80583234-80583253 | None:intergenic | 45.0% | |
| GAAAGCGAATGGGATAGTTG+TGG | + | chr3.1:80582468-80582487 | MS.gene48490:CDS | 45.0% | |
| GACCTTGCCTATCTCCAAAT+AGG | + | chr3.1:80583390-80583409 | MS.gene48490:intron | 45.0% | |
| GCTGCGATTCAAATCTGTTG+AGG | - | chr3.1:80585306-80585325 | None:intergenic | 45.0% | |
| GGATAGTTGTGGTGTTTGCA+TGG | + | chr3.1:80582479-80582498 | MS.gene48490:CDS | 45.0% | |
| GTGGATCTCTACTCTTCTCT+TGG | + | chr3.1:80582535-80582554 | MS.gene48490:CDS | 45.0% | |
| GTTTGCATGGATGTCAAGTG+AGG | + | chr3.1:80582492-80582511 | MS.gene48490:CDS | 45.0% | |
| TAAAATGCATCCGACGCTCA+AGG | + | chr3.1:80586324-80586343 | MS.gene48490:CDS | 45.0% | |
| TAAGAGCTCTTACAGGCCAA+TGG | - | chr3.1:80584531-80584550 | None:intergenic | 45.0% | |
| TATCACCGAAATCCTTGGCA+AGG | + | chr3.1:80585905-80585924 | MS.gene48490:CDS | 45.0% | |
| TGAAGCATGGATGGCAAGTT+GGG | - | chr3.1:80584776-80584795 | None:intergenic | 45.0% | |
| TGAAGCCTGATTACAAGGCA+GGG | + | chr3.1:80582936-80582955 | MS.gene48490:intron | 45.0% | |
| TTCTTAGCTGCTTACAGTGG+TGG | - | chr3.1:80585356-80585375 | None:intergenic | 45.0% | |
| TTGAAGCCTGATTACAAGGC+AGG | + | chr3.1:80582935-80582954 | MS.gene48490:intron | 45.0% | |
| ! | CATCGACTAAAAGACCTTGG+CGG | + | chr3.1:80585544-80585563 | MS.gene48490:CDS | 45.0% |
| ! | GTAATGGAAAATGCCTCTGG+TGG | - | chr3.1:80583115-80583134 | None:intergenic | 45.0% |
| !!! | GAGCGTCGGATGCATTTTAT+AGG | - | chr3.1:80586323-80586342 | None:intergenic | 45.0% |
| !!! | TTAACTGCCGCTGGGTTTTT+TGG | - | chr3.1:80584889-80584908 | None:intergenic | 45.0% |
| AATCGCAGCGTGCAGAGTAT+TGG | + | chr3.1:80585317-80585336 | MS.gene48490:CDS | 50.0% | |
| AATGAGCCAAGTGGCTCACT+GGG | - | chr3.1:80583692-80583711 | None:intergenic | 50.0% | |
| AGACGAGAAACTGGGCATAG+AGG | + | chr3.1:80585965-80585984 | MS.gene48490:CDS | 50.0% | |
| AGCGGTAGTTAACTACCGCT+GGG | + | chr3.1:80584937-80584956 | MS.gene48490:intron | 50.0% | |
| ATCCCAATCCTCGACTGTCT+TGG | - | chr3.1:80586237-80586256 | None:intergenic | 50.0% | |
| CACACTCCCCACCAATTATC+TGG | - | chr3.1:80584585-80584604 | None:intergenic | 50.0% | |
| CTATCCCCTGCCTTGTAATC+AGG | - | chr3.1:80582944-80582963 | None:intergenic | 50.0% | |
| CTGATCCTTTCTCTGAGCTG+AGG | + | chr3.1:80586006-80586025 | MS.gene48490:CDS | 50.0% | |
| CTGATTACAAGGCAGGGGAT+AGG | + | chr3.1:80582942-80582961 | MS.gene48490:intron | 50.0% | |
| CTGGTTGAAATAGCCACCAG+AGG | + | chr3.1:80583099-80583118 | MS.gene48490:intron | 50.0% | |
| GAAGCATGGATGGCAAGTTG+GGG | - | chr3.1:80584775-80584794 | None:intergenic | 50.0% | |
| GAAGCCTGATTACAAGGCAG+GGG | + | chr3.1:80582937-80582956 | MS.gene48490:intron | 50.0% | |
| GACGAGAAACTGGGCATAGA+GGG | + | chr3.1:80585966-80585985 | MS.gene48490:CDS | 50.0% | |
| GCCCTATTTGGAGATAGGCA+AGG | - | chr3.1:80583395-80583414 | None:intergenic | 50.0% | |
| GCTGCTATCACCGAAATCCT+TGG | + | chr3.1:80585900-80585919 | MS.gene48490:CDS | 50.0% | |
| GCTTTCCTCAGCTCAGAGAA+AGG | - | chr3.1:80586014-80586033 | None:intergenic | 50.0% | |
| GTATACCGGATGATTACGGG+TGG | + | chr3.1:80583226-80583245 | MS.gene48490:intron | 50.0% | |
| GTCCGAGCATCAACGCAAAT+GGG | + | chr3.1:80586177-80586196 | MS.gene48490:CDS | 50.0% | |
| TCCCAATCCTCGACTGTCTT+GGG | - | chr3.1:80586236-80586255 | None:intergenic | 50.0% | |
| TCCGAGCATCAACGCAAATG+GGG | + | chr3.1:80586178-80586197 | MS.gene48490:CDS | 50.0% | |
| TGGAGTTCCTCTCCTCATGT+AGG | + | chr3.1:80585586-80585605 | MS.gene48490:CDS | 50.0% | |
| TTGGCTCATTCCCATCCCTA+TGG | + | chr3.1:80583702-80583721 | MS.gene48490:intron | 50.0% | |
| ! | ACCCCATTTGCGTTGATGCT+CGG | - | chr3.1:80586182-80586201 | None:intergenic | 50.0% |
| ! | ATTTGCGTTGATGCTCGGAC+GGG | - | chr3.1:80586177-80586196 | None:intergenic | 50.0% |
| ! | CATTTGCGTTGATGCTCGGA+CGG | - | chr3.1:80586178-80586197 | None:intergenic | 50.0% |
| AGGGATGGGAATGAGCCAAG+TGG | - | chr3.1:80583701-80583720 | None:intergenic | 55.0% | |
| ATGAGCCAAGTGGCTCACTG+GGG | - | chr3.1:80583691-80583710 | None:intergenic | 55.0% | |
| CAGCGGTAGTTAACTACCGC+TGG | + | chr3.1:80584936-80584955 | MS.gene48490:intron | 55.0% | |
| CAGCGGTAGTTAACTACCGC+TGG | - | chr3.1:80584955-80584936 | None:intergenic | 55.0% | |
| CAGTCGAGGATTGGGATGTC+AGG | + | chr3.1:80586240-80586259 | MS.gene48490:CDS | 55.0% | |
| CCAGTTTGACATCTCCGCCA+AGG | - | chr3.1:80585561-80585580 | None:intergenic | 55.0% | |
| CCCAATCCTCGACTGTCTTG+GGG | - | chr3.1:80586235-80586254 | None:intergenic | 55.0% | |
| CCCCAAGACAGTCGAGGATT+GGG | + | chr3.1:80586232-80586251 | MS.gene48490:CDS | 55.0% | |
| CCTTGGCGGAGATGTCAAAC+TGG | + | chr3.1:80585558-80585577 | MS.gene48490:CDS | 55.0% | |
| CGGTAGTTAACTACCGCTGG+GGG | + | chr3.1:80584939-80584958 | MS.gene48490:intron | 55.0% | |
| CGTCCGAGCATCAACGCAAA+TGG | + | chr3.1:80586176-80586195 | MS.gene48490:CDS | 55.0% | |
| GAATGAGCCAAGTGGCTCAC+TGG | - | chr3.1:80583693-80583712 | None:intergenic | 55.0% | |
| GCGGTAGTTAACTACCGCTG+GGG | + | chr3.1:80584938-80584957 | MS.gene48490:intron | 55.0% | |
| GGGTGGAAATGAGCCACGTT+AGG | + | chr3.1:80583243-80583262 | MS.gene48490:intron | 55.0% | |
| TCCCCAAGACAGTCGAGGAT+TGG | + | chr3.1:80586231-80586250 | MS.gene48490:CDS | 55.0% | |
| TCGGAGCAACAGCAAAACCC+TGG | - | chr3.1:80586058-80586077 | None:intergenic | 55.0% | |
| TTGTGTCCCCAAGACAGTCG+AGG | + | chr3.1:80586226-80586245 | MS.gene48490:CDS | 55.0% | |
| CAGCGGCAGTTAACTGCTGC+CGG | + | chr3.1:80584896-80584915 | MS.gene48490:intron | 60.0% | |
| CATAGCCCCAGTGAGCCACT+TGG | + | chr3.1:80583683-80583702 | MS.gene48490:intron | 60.0% | |
| GCAGGGGATAGGTTCCATCC+AGG | + | chr3.1:80582953-80582972 | MS.gene48490:intron | 60.0% | |
| GGCAGCAGTTAACTGCCGCT+GGG | - | chr3.1:80584897-80584916 | None:intergenic | 60.0% | |
| CGGCAGCAGTTAACTGCCGC+TGG | - | chr3.1:80584898-80584917 | None:intergenic | 65.0% | |
| GGGTGACTCGTCGATCCCGA+AGG | + | chr3.1:80583538-80583557 | MS.gene48490:intron | 65.0% | |
| ! | GCGTTGATGCTCGGACGGGT+GGG | - | chr3.1:80586173-80586192 | None:intergenic | 65.0% |
| ! | TGCGTTGATGCTCGGACGGG+TGG | - | chr3.1:80586174-80586193 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 80582415 | 80586352 | 80582415 | ID=MS.gene48490 |
| chr3.1 | mRNA | 80582415 | 80586352 | 80582415 | ID=MS.gene48490.t1;Parent=MS.gene48490 |
| chr3.1 | exon | 80582415 | 80582596 | 80582415 | ID=MS.gene48490.t1.exon1;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80582415 | 80582596 | 80582415 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80583756 | 80583813 | 80583756 | ID=MS.gene48490.t1.exon2;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80583756 | 80583813 | 80583756 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80584399 | 80584479 | 80584399 | ID=MS.gene48490.t1.exon3;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80584399 | 80584479 | 80584399 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80584586 | 80584618 | 80584586 | ID=MS.gene48490.t1.exon4;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80584586 | 80584618 | 80584586 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80585121 | 80585360 | 80585121 | ID=MS.gene48490.t1.exon5;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80585121 | 80585360 | 80585121 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80585466 | 80585607 | 80585466 | ID=MS.gene48490.t1.exon6;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80585466 | 80585607 | 80585466 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| chr3.1 | exon | 80585868 | 80586352 | 80585868 | ID=MS.gene48490.t1.exon7;Parent=MS.gene48490.t1 |
| chr3.1 | CDS | 80585868 | 80586352 | 80585868 | ID=cds.MS.gene48490.t1;Parent=MS.gene48490.t1 |
| Gene Sequence |
| Protein sequence |
