Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48723.t1 | XP_003605489.2 | 93 | 256 | 5 | 1 | 1 | 243 | 1 | 256 | 1.50E-102 | 382.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48723.t1 | F4HT21 | 47.6 | 254 | 110 | 3 | 2 | 242 | 6 | 249 | 2.4e-56 | 220.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48723.t1 | G7JN49 | 93.0 | 256 | 5 | 1 | 1 | 243 | 1 | 256 | 1.1e-102 | 382.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene48723 | 0.813612 | 2.34E-51 | -1.69E-46 |
| MS.gene050119 | MS.gene48723 | 0.804823 | 1.79E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene48723 | 0.802474 | 5.52E-49 | -1.69E-46 |
| MS.gene051370 | MS.gene48723 | 0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene48723 | 0.80657 | 7.72E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene48723 | 0.818202 | 2.22E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene48723 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene055166 | MS.gene48723 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene48723 | 0.826025 | 3.40E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene48723 | 0.857494 | 1.57E-62 | -1.69E-46 |
| MS.gene057060 | MS.gene48723 | 0.805943 | 1.05E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene48723 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene48723 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene48723 | 0.802767 | 4.80E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene48723 | 0.81894 | 1.51E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48723 | MS.gene56256 | PPI |
| MS.gene63514 | MS.gene48723 | PPI |
| MS.gene51627 | MS.gene48723 | PPI |
| MS.gene009458 | MS.gene48723 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48723.t1 | MTR_4g032220 | 94.813 | 347 | 5 | 1 | 1 | 334 | 1 | 347 | 0.0 | 659 |
| MS.gene48723.t1 | MTR_4g032240 | 83.954 | 349 | 40 | 3 | 1 | 334 | 1 | 348 | 0.0 | 570 |
| MS.gene48723.t1 | MTR_4g032300 | 67.049 | 349 | 90 | 4 | 2 | 334 | 1 | 340 | 1.78e-165 | 464 |
| MS.gene48723.t1 | MTR_4g032350 | 67.976 | 331 | 87 | 2 | 9 | 326 | 10 | 334 | 3.23e-159 | 450 |
| MS.gene48723.t1 | MTR_4g032330 | 67.164 | 67 | 22 | 0 | 268 | 334 | 17 | 83 | 3.62e-20 | 84.0 |
| MS.gene48723.t1 | MTR_2g026800 | 94.118 | 34 | 2 | 0 | 266 | 299 | 63 | 96 | 1.18e-11 | 61.2 |
| MS.gene48723.t1 | MTR_0098s0160 | 93.750 | 32 | 2 | 0 | 268 | 299 | 47 | 78 | 7.83e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48723.t1 | AT1G33970 | 53.868 | 349 | 130 | 4 | 2 | 333 | 6 | 340 | 9.35e-126 | 364 |
| MS.gene48723.t1 | AT1G33970 | 53.868 | 349 | 130 | 4 | 2 | 333 | 6 | 340 | 9.35e-126 | 364 |
| MS.gene48723.t1 | AT1G33970 | 53.868 | 349 | 130 | 4 | 2 | 333 | 6 | 340 | 9.35e-126 | 364 |
| MS.gene48723.t1 | AT1G33970 | 53.868 | 349 | 130 | 4 | 2 | 333 | 6 | 340 | 9.35e-126 | 364 |
| MS.gene48723.t1 | AT1G33970 | 54.225 | 284 | 99 | 4 | 2 | 268 | 6 | 275 | 2.65e-103 | 305 |
| MS.gene48723.t1 | AT1G33950 | 45.583 | 283 | 140 | 2 | 15 | 284 | 2 | 283 | 9.25e-83 | 253 |
| MS.gene48723.t1 | AT1G33960 | 47.279 | 294 | 136 | 4 | 26 | 301 | 39 | 331 | 3.84e-81 | 251 |
| MS.gene48723.t1 | AT1G33960 | 47.279 | 294 | 136 | 4 | 26 | 301 | 63 | 355 | 6.80e-81 | 251 |
| MS.gene48723.t1 | AT4G09950 | 41.888 | 339 | 177 | 7 | 13 | 334 | 1 | 336 | 1.15e-80 | 249 |
| MS.gene48723.t1 | AT4G09940 | 42.633 | 319 | 160 | 8 | 13 | 311 | 27 | 342 | 1.16e-80 | 251 |
| MS.gene48723.t1 | AT1G33900 | 42.857 | 294 | 146 | 4 | 25 | 304 | 14 | 299 | 2.67e-80 | 248 |
| MS.gene48723.t1 | AT4G09940 | 42.633 | 319 | 160 | 8 | 13 | 311 | 70 | 385 | 9.67e-80 | 250 |
| MS.gene48723.t1 | AT1G33930 | 43.537 | 294 | 146 | 3 | 9 | 283 | 9 | 301 | 2.52e-79 | 245 |
| MS.gene48723.t1 | AT1G33950 | 45.230 | 283 | 135 | 4 | 15 | 284 | 2 | 277 | 8.56e-77 | 238 |
| MS.gene48723.t1 | AT2G26820 | 43.214 | 280 | 139 | 3 | 30 | 294 | 6 | 280 | 3.58e-70 | 223 |
| MS.gene48723.t1 | AT2G26820 | 41.613 | 310 | 160 | 4 | 30 | 323 | 6 | 310 | 7.93e-70 | 223 |
| MS.gene48723.t1 | AT2G26820 | 41.613 | 310 | 160 | 4 | 30 | 323 | 6 | 310 | 1.17e-68 | 222 |
| MS.gene48723.t1 | AT4G09930 | 38.506 | 348 | 186 | 8 | 2 | 334 | 1 | 335 | 2.14e-68 | 217 |
| MS.gene48723.t1 | AT2G26820 | 43.214 | 280 | 139 | 3 | 30 | 294 | 6 | 280 | 2.38e-68 | 221 |
| MS.gene48723.t1 | AT1G33890 | 40.942 | 276 | 148 | 3 | 23 | 284 | 6 | 280 | 3.24e-67 | 214 |
| MS.gene48723.t1 | AT1G33890 | 40.942 | 276 | 148 | 3 | 23 | 284 | 6 | 280 | 3.24e-67 | 214 |
| MS.gene48723.t1 | AT1G33910 | 43.478 | 276 | 134 | 5 | 23 | 283 | 6 | 274 | 4.76e-67 | 213 |
| MS.gene48723.t1 | AT1G33830 | 44.907 | 216 | 101 | 2 | 31 | 228 | 10 | 225 | 1.18e-58 | 189 |
| MS.gene48723.t1 | AT1G33870 | 39.759 | 249 | 135 | 2 | 54 | 289 | 1 | 247 | 1.52e-58 | 189 |
| MS.gene48723.t1 | AT1G33880 | 40.488 | 205 | 107 | 2 | 29 | 222 | 23 | 223 | 2.70e-53 | 175 |
| MS.gene48723.t1 | AT1G33880 | 40.488 | 205 | 107 | 2 | 29 | 222 | 23 | 223 | 2.70e-53 | 175 |
| MS.gene48723.t1 | AT4G09950 | 39.259 | 270 | 144 | 7 | 82 | 334 | 7 | 273 | 2.40e-52 | 174 |
Find 70 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGCTTGCAGACATTATT+TGG | 0.116982 | 4.4:-72148056 | MS.gene48723:CDS |
| TAATAGTATTCTTGGGAAAA+AGG | 0.229382 | 4.4:-72149097 | MS.gene48723:CDS |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.235468 | 4.4:-72148185 | MS.gene48723:CDS |
| AAGATACACGACGATTATTT+AGG | 0.264282 | 4.4:-72147971 | MS.gene48723:CDS |
| CTGCTGGATCTGAGTTTATT+GGG | 0.278196 | 4.4:-72148184 | MS.gene48723:CDS |
| GCAAATAACTCATCTGTATA+AGG | 0.299412 | 4.4:+72146904 | None:intergenic |
| CTCCGCAAGCGAGGTGATAA+GGG | 0.358423 | 4.4:-72144927 | MS.gene48723:CDS |
| GCAACCGGTAATAGTATTCT+TGG | 0.374174 | 4.4:-72149105 | MS.gene48723:CDS |
| TTTCCCAAGAATACTATTAC+CGG | 0.377468 | 4.4:+72149101 | None:intergenic |
| GCAAAGAAAGGTTGATTCCT+TGG | 0.380823 | 4.4:-72146759 | MS.gene48723:CDS |
| GAAGCTATGTTGAAGATGAT+TGG | 0.381049 | 4.4:-72149224 | MS.gene48723:CDS |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.398135 | 4.4:-72145093 | MS.gene48723:intron |
| GATTGGGAATTGGCGTCGTC+TGG | 0.405509 | 4.4:-72149207 | MS.gene48723:CDS |
| GGTTGCACTCTTCCCATTGC+CGG | 0.411306 | 4.4:+72149122 | None:intergenic |
| ACTCCGCAAGCGAGGTGATA+AGG | 0.415841 | 4.4:-72144928 | MS.gene48723:CDS |
| AAGTCGAGGGCAAGCTCGTC+CGG | 0.440714 | 4.4:-72149069 | MS.gene48723:CDS |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4.4:-72148200 | MS.gene48723:CDS |
| AGCAGAAGACAGTGCAAAGT+TGG | 0.445685 | 4.4:-72145015 | MS.gene48723:CDS |
| TGTTGAAGATGATTGGGAAT+TGG | 0.467324 | 4.4:-72149217 | MS.gene48723:CDS |
| GCATATGCAGCAAACATATG+AGG | 0.468304 | 4.4:-72146699 | MS.gene48723:CDS |
| CAGTGATTGGAATTTATGAT+GGG | 0.469087 | 4.4:-72149249 | None:intergenic |
| TGAGTTATTTGCAGAACTAA+AGG | 0.472581 | 4.4:-72146893 | MS.gene48723:intron |
| AAGCTATGTTGAAGATGATT+GGG | 0.476526 | 4.4:-72149223 | MS.gene48723:CDS |
| TTAGTTGGACGTACCGGCAA+TGG | 0.487610 | 4.4:-72149135 | MS.gene48723:CDS |
| GGCAATGGGAAGAGTGCAAC+CGG | 0.490727 | 4.4:-72149120 | MS.gene48723:CDS |
| CAACCGGTAATAGTATTCTT+GGG | 0.491758 | 4.4:-72149104 | MS.gene48723:CDS |
| TACAAGGCTTGAGAAACAAT+TGG | 0.506471 | 4.4:-72145063 | MS.gene48723:CDS |
| TCTCTTTGACAACAAGACTA+AGG | 0.507101 | 4.4:-72147004 | MS.gene48723:CDS |
| TGCATAGACTTTGCCAAGGA+TGG | 0.507813 | 4.4:-72148146 | MS.gene48723:CDS |
| AGAAAGGTTGATTCCTTGGA+AGG | 0.509028 | 4.4:-72146755 | MS.gene48723:CDS |
| AAGGACGAAAAGAAGCGATC+TGG | 0.516709 | 4.4:-72146985 | MS.gene48723:CDS |
| TAGTTGGACGTACCGGCAAT+GGG | 0.517474 | 4.4:-72149134 | MS.gene48723:CDS |
| GTCAATGTTATTGACACTCC+AGG | 0.521632 | 4.4:-72148994 | MS.gene48723:intron |
| TCCTTCTGAATATCCTTCCA+AGG | 0.521923 | 4.4:+72146742 | None:intergenic |
| GACAGATAACACCACAAGAA+TGG | 0.522190 | 4.4:+72148115 | None:intergenic |
| TGAATGTCCAGAGTCTTTGA+AGG | 0.532393 | 4.4:-72147945 | MS.gene48723:intron |
| TCAAAGACTCTGGACATTCA+CGG | 0.540421 | 4.4:+72147948 | None:intergenic |
| AATGGCATGGATACCATCCT+TGG | 0.542900 | 4.4:+72148133 | None:intergenic |
| GTGATTGGAATTTATGATGG+GGG | 0.545427 | 4.4:-72149247 | None:intergenic |
| TGATAGTATCACAGAATGGC+GGG | 0.545440 | 4.4:-72146930 | MS.gene48723:CDS |
| TAGCAAATCCTCTCTTTGTG+TGG | 0.559170 | 4.4:-72147039 | MS.gene48723:CDS |
| AGCAAATCCTCTCTTTGTGT+GGG | 0.561083 | 4.4:-72147038 | MS.gene48723:CDS |
| TGATTGGAATTTATGATGGG+GGG | 0.573203 | 4.4:-72149246 | None:intergenic |
| AGCTAATGAAGCTCGGACAG+TGG | 0.575504 | 4.4:-72149160 | MS.gene48723:CDS |
| GCTAAAACATATTACTGAGA+TGG | 0.577150 | 4.4:-72146672 | MS.gene48723:intron |
| CTTGCTACTAGATCATAGAA+TGG | 0.577281 | 4.4:+72144896 | None:intergenic |
| AGATTTCAGCTAATGAAGCT+CGG | 0.577288 | 4.4:-72149167 | MS.gene48723:CDS |
| AGCAGTCTGCATTTCACAAG+AGG | 0.579383 | 4.4:+72149038 | None:intergenic |
| ACGATGAAATACGAAAACTA+AGG | 0.582337 | 4.4:-72144977 | MS.gene48723:CDS |
| CATGAAGAACTCCGCAAGCG+AGG | 0.587165 | 4.4:-72144936 | MS.gene48723:CDS |
| TCCTTGGAAGGATATTCAGA+AGG | 0.590769 | 4.4:-72146743 | MS.gene48723:CDS |
| AACGATTCCCACACAAAGAG+AGG | 0.592811 | 4.4:+72147031 | None:intergenic |
| GATTGTTGACTATATGATTG+TGG | 0.602009 | 4.4:-72148027 | MS.gene48723:intron |
| AGTTGAAGGAGGCAACTACA+AGG | 0.610652 | 4.4:-72145079 | MS.gene48723:CDS |
| ACTGCATAGAGAGCAAAGAA+AGG | 0.612802 | 4.4:-72146771 | MS.gene48723:CDS |
| AACATGATAGTATCACAGAA+TGG | 0.613239 | 4.4:-72146934 | MS.gene48723:CDS |
| TCCGCAAGCGAGGTGATAAG+GGG | 0.625525 | 4.4:-72144926 | MS.gene48723:CDS |
| TGGTATCCATGCCATTCTTG+TGG | 0.626101 | 4.4:-72148126 | MS.gene48723:CDS |
| ACTAAGGAAGCATCTTGAGA+AGG | 0.630580 | 4.4:-72144961 | MS.gene48723:CDS |
| AGTGATTGGAATTTATGATG+GGG | 0.631678 | 4.4:-72149248 | None:intergenic |
| CAGACTGCTGAGTTGAGTGA+TGG | 0.635531 | 4.4:-72149024 | MS.gene48723:CDS |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4.4:+72149050 | None:intergenic |
| GTCGTCTGGATCAGCTAGCG+AGG | 0.643176 | 4.4:-72149193 | MS.gene48723:CDS |
| ATAACACCACAAGAATGGCA+TGG | 0.647650 | 4.4:+72148120 | None:intergenic |
| GATTGAGTCAAAGTTGAAGG+AGG | 0.654673 | 4.4:-72145090 | MS.gene48723:CDS |
| ATGATAGTATCACAGAATGG+CGG | 0.664615 | 4.4:-72146931 | MS.gene48723:CDS |
| CCGCAAGCGAGGTGATAAGG+GGG | 0.671834 | 4.4:-72144925 | MS.gene48723:CDS |
| TGTCAGATCACGATTTAGCG+AGG | 0.673590 | 4.4:-72148096 | MS.gene48723:CDS |
| CAAGTGCATAGACTTTGCCA+AGG | 0.679540 | 4.4:-72148150 | MS.gene48723:CDS |
| CGCAAGCGAGGTGATAAGGG+GGG | 0.685418 | 4.4:-72144924 | MS.gene48723:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATTAATATTCTTAATAAA+AGG | - | chr4.4:72146533-72146552 | MS.gene48723:intron | 10.0% |
| !!! | AATTATTAATTTTTCTATAG+AGG | + | chr4.4:72147051-72147070 | None:intergenic | 10.0% |
| !!! | ATTTAGATTTTATCAAAAAT+TGG | - | chr4.4:72148646-72148665 | MS.gene48723:intron | 10.0% |
| !!! | TGACATTTTATTTTATTTTT+TGG | - | chr4.4:72147569-72147588 | MS.gene48723:intron | 10.0% |
| !! | ATAGAATAAGAAAAGAAATA+GGG | + | chr4.4:72146433-72146452 | None:intergenic | 15.0% |
| !! | ATCTAAACTATAATACTAAA+AGG | + | chr4.4:72146406-72146425 | None:intergenic | 15.0% |
| !! | TCTAAACTATAATACTAAAA+GGG | + | chr4.4:72146405-72146424 | None:intergenic | 15.0% |
| !! | TTTAATAAGGAAAACAATTA+TGG | - | chr4.4:72147978-72147997 | MS.gene48723:intron | 15.0% |
| !!! | AAACAACGTTAAATTTTTTT+AGG | - | chr4.4:72145346-72145365 | MS.gene48723:intron | 15.0% |
| !!! | AACAACGTTAAATTTTTTTA+GGG | - | chr4.4:72145347-72145366 | MS.gene48723:intron | 15.0% |
| !!! | AATTTTTTCCAGATAAAATA+AGG | + | chr4.4:72146889-72146908 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTTACATTATCT+AGG | + | chr4.4:72148277-72148296 | None:intergenic | 15.0% |
| !!! | TAATTTTGTTGATCTTTAAT+TGG | - | chr4.4:72147066-72147085 | MS.gene48723:intron | 15.0% |
| !!! | TATTTTATCTGGAAAAAATT+AGG | - | chr4.4:72146889-72146908 | MS.gene48723:intron | 15.0% |
| !! | AAATATTGAAATGTGCATTA+GGG | - | chr4.4:72148354-72148373 | MS.gene48723:intron | 20.0% |
| !! | AGAAAAAACATATATCACAA+AGG | + | chr4.4:72146659-72146678 | None:intergenic | 20.0% |
| !! | AGTATCAGAAATTAAGTAAT+GGG | - | chr4.4:72147818-72147837 | MS.gene48723:intron | 20.0% |
| !! | ATAAATTATCAAACCAAGTT+TGG | - | chr4.4:72148171-72148190 | MS.gene48723:CDS | 20.0% |
| !! | CATAGAATAAGAAAAGAAAT+AGG | + | chr4.4:72146434-72146453 | None:intergenic | 20.0% |
| !! | CTAACTTAATAAGAAAGTTT+AGG | - | chr4.4:72147637-72147656 | MS.gene48723:intron | 20.0% |
| !! | CTAAGTTAATAAGAAAGTTT+AGG | - | chr4.4:72147673-72147692 | MS.gene48723:intron | 20.0% |
| !! | TAGAATAAGAAAAGAAATAG+GGG | + | chr4.4:72146432-72146451 | None:intergenic | 20.0% |
| !! | TCAAAAAATATAGACAGAAA+AGG | + | chr4.4:72147498-72147517 | None:intergenic | 20.0% |
| !! | TTCATATATTTATTGCAGAA+AGG | - | chr4.4:72147339-72147358 | MS.gene48723:intron | 20.0% |
| !! | TTTGTGTTTGATCAATTATA+TGG | - | chr4.4:72149022-72149041 | MS.gene48723:CDS | 20.0% |
| !!! | AAAAGTAGAAGTTTTTTTGT+TGG | - | chr4.4:72146275-72146294 | MS.gene48723:intron | 20.0% |
| !!! | AACAAAAAAACTTCTACTTT+TGG | + | chr4.4:72146276-72146295 | None:intergenic | 20.0% |
| !!! | AATTTTTACATTATCTAGGA+AGG | + | chr4.4:72148273-72148292 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTTGCATTTCAT+GGG | - | chr4.4:72147846-72147865 | MS.gene48723:intron | 20.0% |
| !!! | ATTCTATTTTAAGTTCCTTA+AGG | - | chr4.4:72146363-72146382 | MS.gene48723:intron | 20.0% |
| !!! | CTATTTCTTTTCTTATTCTA+TGG | - | chr4.4:72146432-72146451 | MS.gene48723:intron | 20.0% |
| !!! | TAGATTTTATCAAAAATTGG+AGG | - | chr4.4:72148649-72148668 | MS.gene48723:intron | 20.0% |
| !!! | TATATTCTTTTTGCATTTCA+TGG | - | chr4.4:72147845-72147864 | MS.gene48723:intron | 20.0% |
| !!! | TTCTATTTTAAGTTCCTTAA+GGG | - | chr4.4:72146364-72146383 | MS.gene48723:intron | 20.0% |
| !!! | TTTGAAGGTATTTTTAGTAT+GGG | - | chr4.4:72146212-72146231 | MS.gene48723:intron | 20.0% |
| !!! | TTTGTGATATATGTTTTTTC+TGG | - | chr4.4:72146658-72146677 | MS.gene48723:intron | 20.0% |
| ! | AATAAGGAAAACAATTATGG+AGG | - | chr4.4:72147981-72148000 | MS.gene48723:intron | 25.0% |
| ! | ATAAGGAAAACAATTATGGA+GGG | - | chr4.4:72147982-72148001 | MS.gene48723:intron | 25.0% |
| ! | CAGTATCAGAAATTAAGTAA+TGG | - | chr4.4:72147817-72147836 | MS.gene48723:intron | 25.0% |
| ! | GAAATATTGAAATGTGCATT+AGG | - | chr4.4:72148353-72148372 | MS.gene48723:intron | 25.0% |
| ! | GTTCAAATATACTCTATTCT+TGG | + | chr4.4:72148520-72148539 | None:intergenic | 25.0% |
| ! | TAATAGTATTCTTGGGAAAA+AGG | - | chr4.4:72145045-72145064 | MS.gene48723:CDS | 25.0% |
| ! | TAGCAAAATGAATTCACTTT+GGG | - | chr4.4:72148300-72148319 | MS.gene48723:intron | 25.0% |
| ! | TCAAAGGAACTTTACAAATT+TGG | - | chr4.4:72145711-72145730 | MS.gene48723:intron | 25.0% |
| ! | TGAGATGAAAAAAGAACTTA+TGG | - | chr4.4:72148724-72148743 | MS.gene48723:intron | 25.0% |
| ! | TGTTCTATCTTGTAATCTTA+TGG | - | chr4.4:72146808-72146827 | MS.gene48723:intron | 25.0% |
| ! | TGTTTGCATGTTGATATAAT+TGG | - | chr4.4:72146959-72146978 | MS.gene48723:CDS | 25.0% |
| ! | TTCTAAGCTTGAACTATATT+TGG | - | chr4.4:72148918-72148937 | MS.gene48723:intron | 25.0% |
| ! | TTTCATGTTTCTTACAAGAT+TGG | - | chr4.4:72145536-72145555 | MS.gene48723:intron | 25.0% |
| !! | ATAATCCTGTAAAACTTTTC+AGG | + | chr4.4:72145929-72145948 | None:intergenic | 25.0% |
| !! | ATGTTTGTTACAAATTCACA+AGG | + | chr4.4:72147887-72147906 | None:intergenic | 25.0% |
| !! | CAATCTTGTTTCTTAAATCT+TGG | - | chr4.4:72147293-72147312 | MS.gene48723:intron | 25.0% |
| !! | CCTTTGAGAATAAAAATCAT+CGG | + | chr4.4:72145592-72145611 | None:intergenic | 25.0% |
| !! | GCTTGAATATCTAGAATTAT+AGG | - | chr4.4:72147008-72147027 | MS.gene48723:CDS | 25.0% |
| !! | TATACCAAGCTTTATCAAAA+TGG | - | chr4.4:72148750-72148769 | MS.gene48723:intron | 25.0% |
| !! | TTGTTTTCCTTATTAAACGT+TGG | + | chr4.4:72147975-72147994 | None:intergenic | 25.0% |
| !! | TTTAACCTGAAAAGTTTTAC+AGG | - | chr4.4:72145921-72145940 | MS.gene48723:intron | 25.0% |
| !! | TTTTCCAGATAAAATAAGGA+AGG | + | chr4.4:72146885-72146904 | None:intergenic | 25.0% |
| !!! | CTATGGATTACTTTTTTCAT+TGG | - | chr4.4:72146449-72146468 | MS.gene48723:intron | 25.0% |
| !!! | CTTTGAAGGTATTTTTAGTA+TGG | - | chr4.4:72146211-72146230 | MS.gene48723:intron | 25.0% |
| !!! | TTAACGTTGTTTTATTTCCA+GGG | + | chr4.4:72145338-72145357 | None:intergenic | 25.0% |
| !!! | TTTAACGTTGTTTTATTTCC+AGG | + | chr4.4:72145339-72145358 | None:intergenic | 25.0% |
| AAAAATACCTTCAAAGACTC+TGG | + | chr4.4:72146207-72146226 | None:intergenic | 30.0% | |
| AAACATGAAAATCATCTCCT+GGG | + | chr4.4:72145526-72145545 | None:intergenic | 30.0% | |
| AAATCTCCAAATGGTTCAAA+TGG | + | chr4.4:72146714-72146733 | None:intergenic | 30.0% | |
| AAATGCGAGAGAAAAATTAC+AGG | + | chr4.4:72146855-72146874 | None:intergenic | 30.0% | |
| AAATTCCCATTTGAACCATT+TGG | - | chr4.4:72146705-72146724 | MS.gene48723:CDS | 30.0% | |
| AACACACACAGGTAATAATT+GGG | + | chr4.4:72145252-72145271 | None:intergenic | 30.0% | |
| AACATGATAGTATCACAGAA+TGG | - | chr4.4:72147208-72147227 | MS.gene48723:intron | 30.0% | |
| AACTGCCAATAACTAATCTA+CGG | + | chr4.4:72148037-72148056 | None:intergenic | 30.0% | |
| AAGATACACGACGATTATTT+AGG | - | chr4.4:72146171-72146190 | MS.gene48723:intron | 30.0% | |
| AAGCTATGTTGAAGATGATT+GGG | - | chr4.4:72144919-72144938 | MS.gene48723:CDS | 30.0% | |
| AATCTCCAAATGGTTCAAAT+GGG | + | chr4.4:72146713-72146732 | None:intergenic | 30.0% | |
| AATGCGAGAGAAAAATTACA+GGG | + | chr4.4:72146854-72146873 | None:intergenic | 30.0% | |
| ACAATTTCTACAGAGTAGAA+TGG | - | chr4.4:72148571-72148590 | MS.gene48723:intron | 30.0% | |
| ACGATGAAATACGAAAACTA+AGG | - | chr4.4:72149165-72149184 | MS.gene48723:CDS | 30.0% | |
| AGGTAAATACATGGCAAATT+AGG | - | chr4.4:72145168-72145187 | MS.gene48723:intron | 30.0% | |
| AGTTATGAAAACTGCAAGAT+GGG | - | chr4.4:72148437-72148456 | MS.gene48723:intron | 30.0% | |
| ATCCCCTAGAATAATATTCT+TGG | - | chr4.4:72145752-72145771 | MS.gene48723:intron | 30.0% | |
| ATCTCATTGTTTATTCCTTG+TGG | + | chr4.4:72148014-72148033 | None:intergenic | 30.0% | |
| CAAAATCAAACATTGTACGA+GGG | + | chr4.4:72148700-72148719 | None:intergenic | 30.0% | |
| CAATTTCTACAGAGTAGAAT+GGG | - | chr4.4:72148572-72148591 | MS.gene48723:intron | 30.0% | |
| CATAACTCAAACAAAGTCAT+AGG | + | chr4.4:72145839-72145858 | None:intergenic | 30.0% | |
| CATAACTCATTACAAACTCA+TGG | + | chr4.4:72148424-72148443 | None:intergenic | 30.0% | |
| CATCTTGATCATAAATCTCA+AGG | - | chr4.4:72148199-72148218 | MS.gene48723:CDS | 30.0% | |
| CTAGCAAAATGAATTCACTT+TGG | - | chr4.4:72148299-72148318 | MS.gene48723:intron | 30.0% | |
| CTAGTGATTCGTATCAATAA+AGG | + | chr4.4:72146596-72146615 | None:intergenic | 30.0% | |
| CTGCCAAGAATATTATTCTA+GGG | + | chr4.4:72145758-72145777 | None:intergenic | 30.0% | |
| GCAAATAACTCATCTGTATA+AGG | + | chr4.4:72147241-72147260 | None:intergenic | 30.0% | |
| GCTAAAACATATTACTGAGA+TGG | - | chr4.4:72147470-72147489 | MS.gene48723:intron | 30.0% | |
| GGAGATAAAATTAAATTCGC+AGG | - | chr4.4:72148776-72148795 | MS.gene48723:intron | 30.0% | |
| GTAGGAAAAAAAGAAGATTG+AGG | - | chr4.4:72148459-72148478 | MS.gene48723:intron | 30.0% | |
| GTCATGCGAATATTATTTAG+AGG | + | chr4.4:72148952-72148971 | None:intergenic | 30.0% | |
| TACGCAAATATACTGTTTGT+TGG | + | chr4.4:72148821-72148840 | None:intergenic | 30.0% | |
| TGAGTTATTTGCAGAACTAA+AGG | - | chr4.4:72147249-72147268 | MS.gene48723:intron | 30.0% | |
| TGCCAAGAATATTATTCTAG+GGG | + | chr4.4:72145757-72145776 | None:intergenic | 30.0% | |
| TTAAAACAGTGATATGCAGA+AGG | - | chr4.4:72146732-72146751 | MS.gene48723:CDS | 30.0% | |
| TTTCCCAAGAATACTATTAC+CGG | + | chr4.4:72145044-72145063 | None:intergenic | 30.0% | |
| ! | CAAGCTTTATCAAAATGGAT+AGG | - | chr4.4:72148755-72148774 | MS.gene48723:intron | 30.0% |
| ! | CCGATGATTTTTATTCTCAA+AGG | - | chr4.4:72145589-72145608 | MS.gene48723:intron | 30.0% |
| ! | GAAAGTAGATTTTGTGAGAT+GGG | - | chr4.4:72145629-72145648 | MS.gene48723:intron | 30.0% |
| ! | GATTGTTGACTATATGATTG+TGG | - | chr4.4:72146115-72146134 | MS.gene48723:intron | 30.0% |
| ! | GATTTTTATTCTCAAAGGAG+AGG | - | chr4.4:72145594-72145613 | MS.gene48723:intron | 30.0% |
| ! | TAATTTGCCATGTATTTACC+TGG | + | chr4.4:72145169-72145188 | None:intergenic | 30.0% |
| !! | CACAAAGGTGCATATTTTAA+AGG | + | chr4.4:72146644-72146663 | None:intergenic | 30.0% |
| !! | CACTGTTTTAAATCTCCAAA+TGG | + | chr4.4:72146723-72146742 | None:intergenic | 30.0% |
| !! | CTATCCATTTTGATAAAGCT+TGG | + | chr4.4:72148757-72148776 | None:intergenic | 30.0% |
| !!! | AATGCCTTCCTTATTTTATC+TGG | - | chr4.4:72146878-72146897 | MS.gene48723:intron | 30.0% |
| !!! | GAAAAAGGTTTTTAAGTCGA+GGG | - | chr4.4:72145060-72145079 | MS.gene48723:CDS | 30.0% |
| !!! | TTTTTGGAATGTCATTCACA+AGG | - | chr4.4:72145783-72145802 | MS.gene48723:intron | 30.0% |
| AAACAGTACACACCCAAAAA+TGG | + | chr4.4:72147927-72147946 | None:intergenic | 35.0% | |
| AACAGCAAAACAACCAAGAA+AGG | + | chr4.4:72146792-72146811 | None:intergenic | 35.0% | |
| AGATTTCAGCTAATGAAGCT+CGG | - | chr4.4:72144975-72144994 | MS.gene48723:CDS | 35.0% | |
| ATAAAGGAGAGAGTTCAAGA+AGG | + | chr4.4:72146580-72146599 | None:intergenic | 35.0% | |
| ATACATGGCAAATTAGGCTA+TGG | - | chr4.4:72145174-72145193 | MS.gene48723:intron | 35.0% | |
| ATGATAGTATCACAGAATGG+CGG | - | chr4.4:72147211-72147230 | MS.gene48723:intron | 35.0% | |
| ATTTGCAGAACTAAAGGTAG+AGG | - | chr4.4:72147255-72147274 | MS.gene48723:intron | 35.0% | |
| CAACACACACAGGTAATAAT+TGG | + | chr4.4:72145253-72145272 | None:intergenic | 35.0% | |
| CAACCGGTAATAGTATTCTT+GGG | - | chr4.4:72145038-72145057 | MS.gene48723:CDS | 35.0% | |
| CATTACAAACTCATGGAATC+AGG | + | chr4.4:72148417-72148436 | None:intergenic | 35.0% | |
| CCAAAATCAAACATTGTACG+AGG | + | chr4.4:72148701-72148720 | None:intergenic | 35.0% | |
| CCTAGAATAATATTCTTGGC+AGG | - | chr4.4:72145756-72145775 | MS.gene48723:intron | 35.0% | |
| CCTGCCAAGAATATTATTCT+AGG | + | chr4.4:72145759-72145778 | None:intergenic | 35.0% | |
| CTAACAAAAACAACACACAC+AGG | + | chr4.4:72145263-72145282 | None:intergenic | 35.0% | |
| CTATATGATTGTGGTCTTCA+CGG | - | chr4.4:72146124-72146143 | MS.gene48723:intron | 35.0% | |
| CTGCAATGAATGCAACTATT+TGG | + | chr4.4:72147735-72147754 | None:intergenic | 35.0% | |
| GAAACATGAAAATCATCTCC+TGG | + | chr4.4:72145527-72145546 | None:intergenic | 35.0% | |
| GAAGCTATGTTGAAGATGAT+TGG | - | chr4.4:72144918-72144937 | MS.gene48723:CDS | 35.0% | |
| GAGTTATGAAAACTGCAAGA+TGG | - | chr4.4:72148436-72148455 | MS.gene48723:intron | 35.0% | |
| GCAAGTAGATCTTGATCAAT+GGG | - | chr4.4:72148141-72148160 | MS.gene48723:CDS | 35.0% | |
| GTACGAACCAACGTTTAATA+AGG | - | chr4.4:72147965-72147984 | MS.gene48723:CDS | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | - | chr4.4:72149049-72149068 | MS.gene48723:CDS | 35.0% | |
| TAAGTAGGGGAAATTGTACT+GGG | - | chr4.4:72148084-72148103 | MS.gene48723:CDS | 35.0% | |
| TACAAGGCTTGAGAAACAAT+TGG | - | chr4.4:72149079-72149098 | MS.gene48723:CDS | 35.0% | |
| TACATTATCTAGGAAGGAGT+TGG | + | chr4.4:72148267-72148286 | None:intergenic | 35.0% | |
| TAGTTATTGGCAGTTCCTAT+AGG | - | chr4.4:72148042-72148061 | MS.gene48723:CDS | 35.0% | |
| TATATACATGCATGACTGCA+TGG | - | chr4.4:72147608-72147627 | MS.gene48723:intron | 35.0% | |
| TATATGATTGTGGTCTTCAC+GGG | - | chr4.4:72146125-72146144 | MS.gene48723:intron | 35.0% | |
| TATCCTACAAAACACAGACA+CGG | + | chr4.4:72145410-72145429 | None:intergenic | 35.0% | |
| TCATTGCAGTTAGCTATTGT+TGG | - | chr4.4:72147746-72147765 | MS.gene48723:intron | 35.0% | |
| TCTCTTTGACAACAAGACTA+AGG | - | chr4.4:72147138-72147157 | MS.gene48723:intron | 35.0% | |
| TGCAAGTAGATCTTGATCAA+TGG | - | chr4.4:72148140-72148159 | MS.gene48723:CDS | 35.0% | |
| TGTTGAAGATGATTGGGAAT+TGG | - | chr4.4:72144925-72144944 | MS.gene48723:CDS | 35.0% | |
| TTACAAATTCACAAGGCCAT+TGG | + | chr4.4:72147880-72147899 | None:intergenic | 35.0% | |
| TTATTCTCAAAGGAGAGGTT+GGG | - | chr4.4:72145599-72145618 | MS.gene48723:intron | 35.0% | |
| TTTATTCTCAAAGGAGAGGT+TGG | - | chr4.4:72145598-72145617 | MS.gene48723:intron | 35.0% | |
| ! | CCTTTGAACTTTTCCAAAAG+CGG | + | chr4.4:72145698-72145717 | None:intergenic | 35.0% |
| ! | CTTTGAACTTTTCCAAAAGC+GGG | + | chr4.4:72145697-72145716 | None:intergenic | 35.0% |
| ! | GAGATCCGTAGATTAGTTAT+TGG | - | chr4.4:72148029-72148048 | MS.gene48723:CDS | 35.0% |
| ! | GGAAAGTAGATTTTGTGAGA+TGG | - | chr4.4:72145628-72145647 | MS.gene48723:intron | 35.0% |
| ! | GGATTATTTGAAGTTTCTGC+TGG | - | chr4.4:72145942-72145961 | MS.gene48723:intron | 35.0% |
| ! | TTTGAACTTTTCCAAAAGCG+GGG | + | chr4.4:72145696-72145715 | None:intergenic | 35.0% |
| ! | TTTTGCATTTCATGGGTCAT+TGG | - | chr4.4:72147853-72147872 | MS.gene48723:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr4.4:72146235-72146254 | MS.gene48723:intron | 35.0% |
| !! | AACTTTTGGTAGCTAAGTAG+GGG | - | chr4.4:72148071-72148090 | MS.gene48723:CDS | 35.0% |
| !! | AGAACTTTTGGTAGCTAAGT+AGG | - | chr4.4:72148069-72148088 | MS.gene48723:CDS | 35.0% |
| !! | CAAACTTTTCAAGACGTAGA+AGG | + | chr4.4:72145895-72145914 | None:intergenic | 35.0% |
| !! | CCTCGTACAATGTTTGATTT+TGG | - | chr4.4:72148698-72148717 | MS.gene48723:intron | 35.0% |
| !! | GAACTTTTGGTAGCTAAGTA+GGG | - | chr4.4:72148070-72148089 | MS.gene48723:CDS | 35.0% |
| !! | GATCTACTTGCATTTTGATC+AGG | + | chr4.4:72148132-72148151 | None:intergenic | 35.0% |
| !! | TCATAGGTGTTACTTGTTTC+AGG | + | chr4.4:72145823-72145842 | None:intergenic | 35.0% |
| !! | TGTAGGTTATTAGCCTTTCT+TGG | - | chr4.4:72146776-72146795 | MS.gene48723:CDS | 35.0% |
| !! | TGTTTTTGTTAGTGCTTCGT+AGG | - | chr4.4:72145271-72145290 | MS.gene48723:intron | 35.0% |
| !! | TTTTAGGGACAGCTTATCAT+AGG | - | chr4.4:72145362-72145381 | MS.gene48723:intron | 35.0% |
| !!! | ATTCTTGGCAGGATGTTTTT+TGG | - | chr4.4:72145767-72145786 | MS.gene48723:intron | 35.0% |
| !!! | GGAAAAAGGTTTTTAAGTCG+AGG | - | chr4.4:72145059-72145078 | MS.gene48723:CDS | 35.0% |
| AAATCATCTCCTGGGTGTAA+AGG | + | chr4.4:72145518-72145537 | None:intergenic | 40.0% | |
| AATCATCTCCTGGGTGTAAA+GGG | + | chr4.4:72145517-72145536 | None:intergenic | 40.0% | |
| ACGGACACCAAAAACGAAAT+GGG | + | chr4.4:72145391-72145410 | None:intergenic | 40.0% | |
| ACTGCATAGAGAGCAAAGAA+AGG | - | chr4.4:72147371-72147390 | MS.gene48723:intron | 40.0% | |
| AGCAAATCCTCTCTTTGTGT+GGG | - | chr4.4:72147104-72147123 | MS.gene48723:intron | 40.0% | |
| AGCAAGTCTTCTTACGCATT+TGG | - | chr4.4:72146614-72146633 | MS.gene48723:intron | 40.0% | |
| ATAACACCACAAGAATGGCA+TGG | + | chr4.4:72146025-72146044 | None:intergenic | 40.0% | |
| ATGAAAACTGCAAGATGGGT+AGG | - | chr4.4:72148441-72148460 | MS.gene48723:intron | 40.0% | |
| CAGGAGAAACTATCAAGAGT+AGG | - | chr4.4:72148795-72148814 | MS.gene48723:intron | 40.0% | |
| CTAAGTAGGGGAAATTGTAC+TGG | - | chr4.4:72148083-72148102 | MS.gene48723:CDS | 40.0% | |
| CTGCTGGATCTGAGTTTATT+GGG | - | chr4.4:72145958-72145977 | MS.gene48723:intron | 40.0% | |
| GACAGATAACACCACAAGAA+TGG | + | chr4.4:72146030-72146049 | None:intergenic | 40.0% | |
| GATTGAGTCAAAGTTGAAGG+AGG | - | chr4.4:72149052-72149071 | MS.gene48723:CDS | 40.0% | |
| GCAACCGGTAATAGTATTCT+TGG | - | chr4.4:72145037-72145056 | MS.gene48723:CDS | 40.0% | |
| GCATATGCAGCAAACATATG+AGG | - | chr4.4:72147443-72147462 | MS.gene48723:intron | 40.0% | |
| GCTTATGATAAGTTGTGCCT+CGG | + | chr4.4:72145471-72145490 | None:intergenic | 40.0% | |
| GTCAATGTTATTGACACTCC+AGG | - | chr4.4:72145148-72145167 | MS.gene48723:intron | 40.0% | |
| GTGAACTCTATGCTCTATGT+AGG | - | chr4.4:72146759-72146778 | MS.gene48723:CDS | 40.0% | |
| TAGCAAATCCTCTCTTTGTG+TGG | - | chr4.4:72147103-72147122 | MS.gene48723:intron | 40.0% | |
| TCAAAGACTCTGGACATTCA+CGG | + | chr4.4:72146197-72146216 | None:intergenic | 40.0% | |
| TCAAGATGTGATGCCAAACT+TGG | + | chr4.4:72148187-72148206 | None:intergenic | 40.0% | |
| TCCTTCTGAATATCCTTCCA+AGG | + | chr4.4:72147403-72147422 | None:intergenic | 40.0% | |
| TCCTTGGAAGGATATTCAGA+AGG | - | chr4.4:72147399-72147418 | MS.gene48723:intron | 40.0% | |
| TCTGCTGGATCTGAGTTTAT+TGG | - | chr4.4:72145957-72145976 | MS.gene48723:intron | 40.0% | |
| TGAATGTCCAGAGTCTTTGA+AGG | - | chr4.4:72146197-72146216 | MS.gene48723:intron | 40.0% | |
| TGACACTCCAGGTAAATACA+TGG | - | chr4.4:72145159-72145178 | MS.gene48723:intron | 40.0% | |
| TGATAGTATCACAGAATGGC+GGG | - | chr4.4:72147212-72147231 | MS.gene48723:intron | 40.0% | |
| TTCCTTAACTTATGCCCCAA+GGG | + | chr4.4:72146253-72146272 | None:intergenic | 40.0% | |
| ! | AGAAAGGTTGATTCCTTGGA+AGG | - | chr4.4:72147387-72147406 | MS.gene48723:intron | 40.0% |
| ! | CCAAAAGTTCTGACTCCTAT+AGG | + | chr4.4:72148060-72148079 | None:intergenic | 40.0% |
| ! | CCTATAGGAGTCAGAACTTT+TGG | - | chr4.4:72148057-72148076 | MS.gene48723:CDS | 40.0% |
| ! | CTGAAGTTCTGACTCTTGTT+GGG | - | chr4.4:72148482-72148501 | MS.gene48723:intron | 40.0% |
| ! | GATTAGTCGAGTTTAAACCG+AGG | - | chr4.4:72145451-72145470 | MS.gene48723:intron | 40.0% |
| ! | GCAAAGAAAGGTTGATTCCT+TGG | - | chr4.4:72147383-72147402 | MS.gene48723:intron | 40.0% |
| ! | TAGACACGTGCATCCATTTT+TGG | - | chr4.4:72147911-72147930 | MS.gene48723:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTTG+GGG | - | chr4.4:72146236-72146255 | MS.gene48723:intron | 40.0% |
| !! | ACTAAGGAAGCATCTTGAGA+AGG | - | chr4.4:72149181-72149200 | MS.gene48723:CDS | 40.0% |
| !! | AGACACGTGCATCCATTTTT+GGG | - | chr4.4:72147912-72147931 | MS.gene48723:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+AGG | + | chr4.4:72146381-72146400 | None:intergenic | 40.0% |
| !! | CCGCTTTTGGAAAAGTTCAA+AGG | - | chr4.4:72145695-72145714 | MS.gene48723:intron | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr4.4:72146234-72146253 | MS.gene48723:intron | 40.0% |
| !! | GAATTCACTTTGGGTTGAGA+TGG | - | chr4.4:72148309-72148328 | MS.gene48723:intron | 40.0% |
| !!! | GGGTTTTGAAGGAATGTGAA+TGG | + | chr4.4:72145497-72145516 | None:intergenic | 40.0% |
| !!! | GTTTTGACTCAACGTCACTT+AGG | - | chr4.4:72147770-72147789 | MS.gene48723:intron | 40.0% |
| AACGATTCCCACACAAAGAG+AGG | + | chr4.4:72147114-72147133 | None:intergenic | 45.0% | |
| AAGGACGAAAAGAAGCGATC+TGG | - | chr4.4:72147157-72147176 | MS.gene48723:intron | 45.0% | |
| AATGGCATGGATACCATCCT+TGG | + | chr4.4:72146012-72146031 | None:intergenic | 45.0% | |
| AGCAGAAGACAGTGCAAAGT+TGG | - | chr4.4:72149127-72149146 | MS.gene48723:CDS | 45.0% | |
| AGCAGTCTGCATTTCACAAG+AGG | + | chr4.4:72145107-72145126 | None:intergenic | 45.0% | |
| AGTTGAAGGAGGCAACTACA+AGG | - | chr4.4:72149063-72149082 | MS.gene48723:CDS | 45.0% | |
| CAAGTGCATAGACTTTGCCA+AGG | - | chr4.4:72145992-72146011 | MS.gene48723:intron | 45.0% | |
| CACGGACACCAAAAACGAAA+TGG | + | chr4.4:72145392-72145411 | None:intergenic | 45.0% | |
| CATTAGTCGAGTTTGAACCC+TGG | - | chr4.4:72145318-72145337 | MS.gene48723:intron | 45.0% | |
| CGCAGCTTGCAGACATTATT+TGG | - | chr4.4:72146086-72146105 | MS.gene48723:intron | 45.0% | |
| CGGACACCAAAAACGAAATG+GGG | + | chr4.4:72145390-72145409 | None:intergenic | 45.0% | |
| CTTCAAAACCCTTTACACCC+AGG | - | chr4.4:72145506-72145525 | MS.gene48723:intron | 45.0% | |
| GTTCCTTAACTTATGCCCCA+AGG | + | chr4.4:72146254-72146273 | None:intergenic | 45.0% | |
| TAGGGGAAATTGTACTGGGA+AGG | - | chr4.4:72148088-72148107 | MS.gene48723:CDS | 45.0% | |
| TGCATAGACTTTGCCAAGGA+TGG | - | chr4.4:72145996-72146015 | MS.gene48723:intron | 45.0% | |
| TGCATTAGGGATCAGAATGC+AGG | - | chr4.4:72148367-72148386 | MS.gene48723:intron | 45.0% | |
| TGGTATCCATGCCATTCTTG+TGG | - | chr4.4:72146016-72146035 | MS.gene48723:intron | 45.0% | |
| TGTCAGATCACGATTTAGCG+AGG | - | chr4.4:72146046-72146065 | MS.gene48723:intron | 45.0% | |
| TTCACAAGAGGAAGTGACAC+CGG | + | chr4.4:72145095-72145114 | None:intergenic | 45.0% | |
| TTCATGGGTCATTGGTCCAA+TGG | - | chr4.4:72147861-72147880 | MS.gene48723:intron | 45.0% | |
| ! | AAGTTCTGACTCTTGTTGGG+TGG | - | chr4.4:72148485-72148504 | MS.gene48723:intron | 45.0% |
| ! | AGGAAGGAGTTGGTTGAGTA+AGG | + | chr4.4:72148257-72148276 | None:intergenic | 45.0% |
| ! | AGTTCTGACTCTTGTTGGGT+GGG | - | chr4.4:72148486-72148505 | MS.gene48723:intron | 45.0% |
| ! | GCTGAAGTTCTGACTCTTGT+TGG | - | chr4.4:72148481-72148500 | MS.gene48723:intron | 45.0% |
| ! | TAGGCACCCCATTTCGTTTT+TGG | - | chr4.4:72145381-72145400 | MS.gene48723:intron | 45.0% |
| ! | TGTCCGTGTCTGTGTTTTGT+AGG | - | chr4.4:72145404-72145423 | MS.gene48723:intron | 45.0% |
| ! | TTTAACCTCAACCCCGCTTT+TGG | - | chr4.4:72145682-72145701 | MS.gene48723:intron | 45.0% |
| !! | CTGGGTGTAAAGGGTTTTGA+AGG | + | chr4.4:72145508-72145527 | None:intergenic | 45.0% |
| !! | TATGGAGGGTATCTTCCACA+AGG | - | chr4.4:72147996-72148015 | MS.gene48723:intron | 45.0% |
| !!! | GTGGTTTTAGTTGGACGTAC+CGG | - | chr4.4:72145001-72145020 | MS.gene48723:CDS | 45.0% |
| AAAGGAGAGGTTGGGCTGTT+GGG | - | chr4.4:72145607-72145626 | MS.gene48723:intron | 50.0% | |
| AGCTAATGAAGCTCGGACAG+TGG | - | chr4.4:72144982-72145001 | MS.gene48723:CDS | 50.0% | |
| ATGATTGTGGTCTTCACGGG+AGG | - | chr4.4:72146128-72146147 | MS.gene48723:intron | 50.0% | |
| GTTCTGACTCTTGTTGGGTG+GGG | - | chr4.4:72148487-72148506 | MS.gene48723:intron | 50.0% | |
| TGATTGTGGTCTTCACGGGA+GGG | - | chr4.4:72146129-72146148 | MS.gene48723:intron | 50.0% | |
| TGCCCTTGGGGCATAAGTTA+AGG | - | chr4.4:72146248-72146267 | MS.gene48723:intron | 50.0% | |
| TTCTGACTCTTGTTGGGTGG+GGG | - | chr4.4:72148488-72148507 | MS.gene48723:intron | 50.0% | |
| ! | CAGACTGCTGAGTTGAGTGA+TGG | - | chr4.4:72145118-72145137 | MS.gene48723:intron | 50.0% |
| ! | CTTTTCCAAAAGCGGGGTTG+AGG | + | chr4.4:72145690-72145709 | None:intergenic | 50.0% |
| ! | TAGTTGGACGTACCGGCAAT+GGG | - | chr4.4:72145008-72145027 | MS.gene48723:CDS | 50.0% |
| ! | TTAGTTGGACGTACCGGCAA+TGG | - | chr4.4:72145007-72145026 | MS.gene48723:CDS | 50.0% |
| !!! | GCTCGGACAGTGGTTTTAGT+TGG | - | chr4.4:72144992-72145011 | MS.gene48723:CDS | 50.0% |
| ACTCCGCAAGCGAGGTGATA+AGG | - | chr4.4:72149214-72149233 | MS.gene48723:CDS | 55.0% | |
| CAAAGGAGAGGTTGGGCTGT+TGG | - | chr4.4:72145606-72145625 | MS.gene48723:intron | 55.0% | |
| CATGAAGAACTCCGCAAGCG+AGG | - | chr4.4:72149206-72149225 | MS.gene48723:CDS | 55.0% | |
| CTCCGCAAGCGAGGTGATAA+GGG | - | chr4.4:72149215-72149234 | MS.gene48723:CDS | 55.0% | |
| GATTGGGAATTGGCGTCGTC+TGG | - | chr4.4:72144935-72144954 | MS.gene48723:CDS | 55.0% | |
| GATTGTGGTCTTCACGGGAG+GGG | - | chr4.4:72146130-72146149 | MS.gene48723:intron | 55.0% | |
| GGTTGCACTCTTCCCATTGC+CGG | + | chr4.4:72145023-72145042 | None:intergenic | 55.0% | |
| TCCGCAAGCGAGGTGATAAG+GGG | - | chr4.4:72149216-72149235 | MS.gene48723:CDS | 55.0% | |
| ! | GGCAATGGGAAGAGTGCAAC+CGG | - | chr4.4:72145022-72145041 | MS.gene48723:CDS | 55.0% |
| AAGTCGAGGGCAAGCTCGTC+CGG | - | chr4.4:72145073-72145092 | MS.gene48723:CDS | 60.0% | |
| CCCCCTTATCACCTCGCTTG+CGG | + | chr4.4:72149220-72149239 | None:intergenic | 60.0% | |
| CCGCAAGCGAGGTGATAAGG+GGG | - | chr4.4:72149217-72149236 | MS.gene48723:CDS | 60.0% | |
| CGCAAGCGAGGTGATAAGGG+GGG | - | chr4.4:72149218-72149237 | MS.gene48723:CDS | 60.0% | |
| GACTCTTGTTGGGTGGGGGA+AGG | - | chr4.4:72148492-72148511 | MS.gene48723:intron | 60.0% | |
| GTCGTCTGGATCAGCTAGCG+AGG | - | chr4.4:72144949-72144968 | MS.gene48723:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 72144908 | 72149256 | 72144908 | ID=MS.gene48723 |
| chr4.4 | mRNA | 72144908 | 72149256 | 72144908 | ID=MS.gene48723.t1;Parent=MS.gene48723 |
| chr4.4 | exon | 72148995 | 72149256 | 72148995 | ID=MS.gene48723.t1.exon1;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72148995 | 72149256 | 72148995 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| chr4.4 | exon | 72148028 | 72148221 | 72148028 | ID=MS.gene48723.t1.exon2;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72148028 | 72148221 | 72148028 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| chr4.4 | exon | 72147946 | 72147990 | 72147946 | ID=MS.gene48723.t1.exon3;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72147946 | 72147990 | 72147946 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| chr4.4 | exon | 72146894 | 72147058 | 72146894 | ID=MS.gene48723.t1.exon4;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72146894 | 72147058 | 72146894 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| chr4.4 | exon | 72146673 | 72146807 | 72146673 | ID=MS.gene48723.t1.exon5;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72146673 | 72146807 | 72146673 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| chr4.4 | exon | 72144908 | 72145111 | 72144908 | ID=MS.gene48723.t1.exon6;Parent=MS.gene48723.t1 |
| chr4.4 | CDS | 72144908 | 72145111 | 72144908 | ID=cds.MS.gene48723.t1;Parent=MS.gene48723.t1 |
| Gene Sequence |
| Protein sequence |
