AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48786

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48786.t1 MTR_4g029620 80.430 419 42 3 1 419 1 379 1.89e-168 478
MS.gene48786.t1 MTR_4g029620 71.111 90 26 0 349 438 24 113 1.46e-20 93.2
MS.gene48786.t1 MTR_4g029550 86.478 318 33 2 1 318 1 308 2.21e-125 366
MS.gene48786.t1 MTR_4g029550 87.197 289 32 1 151 439 26 309 1.34e-116 343
MS.gene48786.t1 MTR_4g029550 86.552 290 34 1 141 430 26 310 2.14e-116 343
MS.gene48786.t1 MTR_4g029550 84.848 297 35 2 114 410 24 310 4.25e-116 342
MS.gene48786.t1 MTR_4g029550 87.153 288 32 1 91 378 26 308 8.80e-116 342
MS.gene48786.t1 MTR_4g029550 87.241 290 32 1 101 390 26 310 1.18e-115 341
MS.gene48786.t1 MTR_4g029550 86.458 288 34 1 111 398 26 308 1.71e-114 338
MS.gene48786.t1 MTR_4g029550 87.059 255 33 0 185 439 25 279 2.66e-104 312
MS.gene48786.t1 MTR_4g029550 71.875 96 22 1 349 439 24 119 2.72e-23 100
MS.gene48786.t1 MTR_4g029630 80.995 221 37 1 139 359 3 218 4.57e-82 252
MS.gene48786.t1 MTR_4g029630 79.638 221 40 1 129 349 3 218 4.15e-81 249
MS.gene48786.t1 MTR_4g029630 80.090 221 39 1 149 369 3 218 1.05e-80 248
MS.gene48786.t1 MTR_4g029630 82.110 218 34 1 161 378 5 217 5.20e-80 246
MS.gene48786.t1 MTR_4g029630 79.638 221 40 1 169 389 3 218 7.51e-80 246
MS.gene48786.t1 MTR_4g029630 78.505 214 46 0 226 439 5 218 1.33e-79 246
MS.gene48786.t1 MTR_4g029630 79.091 220 41 1 119 338 3 217 1.47e-79 245
MS.gene48786.t1 MTR_4g029630 80.374 214 42 0 185 398 4 217 9.62e-79 243
MS.gene48786.t1 MTR_4g029630 79.907 214 43 0 195 408 4 217 3.12e-78 242
MS.gene48786.t1 MTR_4g029630 79.091 220 41 1 69 288 3 217 5.66e-78 241
MS.gene48786.t1 MTR_4g029630 77.064 218 45 1 91 308 5 217 1.22e-75 235
MS.gene48786.t1 MTR_4g029630 76.606 218 46 1 81 298 5 217 5.03e-75 234
MS.gene48786.t1 MTR_4g029630 76.364 220 47 1 99 318 3 217 5.85e-75 234
MS.gene48786.t1 MTR_4g029630 77.064 218 45 1 111 328 5 217 7.10e-75 233
MS.gene48786.t1 MTR_4g029630 76.606 218 46 1 51 268 5 217 7.14e-74 231
MS.gene48786.t1 MTR_4g029630 75.688 218 48 1 41 258 5 217 7.69e-74 231
MS.gene48786.t1 MTR_4g029630 75.342 219 49 1 31 249 5 218 1.20e-73 230
MS.gene48786.t1 MTR_4g029630 74.766 214 49 1 25 238 9 217 1.48e-70 222
MS.gene48786.t1 MTR_4g029630 72.222 90 25 0 25 114 129 218 3.95e-24 100
MS.gene48786.t1 MTR_4g029630 66.279 86 24 1 359 439 3 88 2.15e-17 81.3
MS.gene48786.t1 MTR_4g029600 86.000 200 23 1 151 350 26 220 1.15e-69 220
MS.gene48786.t1 MTR_4g029600 85.859 198 23 1 141 338 26 218 1.21e-69 220
MS.gene48786.t1 MTR_4g029600 73.790 248 35 2 1 248 1 218 1.30e-69 220
MS.gene48786.t1 MTR_4g029600 83.744 203 25 2 129 328 21 218 2.14e-69 219
MS.gene48786.t1 MTR_4g029600 84.000 200 27 1 161 360 26 220 2.23e-68 217
MS.gene48786.t1 MTR_4g029600 82.353 204 26 2 195 398 25 218 2.06e-66 212
MS.gene48786.t1 MTR_4g029600 80.976 205 29 2 114 318 24 218 3.85e-65 208
MS.gene48786.t1 MTR_4g029600 80.808 198 33 1 101 298 26 218 4.40e-64 206
MS.gene48786.t1 MTR_4g029600 81.250 208 24 3 171 378 26 218 8.20e-64 205
MS.gene48786.t1 MTR_4g029600 80.808 198 33 1 111 308 26 218 9.53e-64 205
MS.gene48786.t1 MTR_4g029600 78.049 205 35 2 226 430 26 220 5.83e-63 203
MS.gene48786.t1 MTR_4g029600 76.190 210 35 3 230 439 25 219 4.01e-61 198
MS.gene48786.t1 MTR_4g029600 65.934 91 21 2 349 439 24 104 2.38e-16 78.2
MS.gene48786.t1 MTR_6g011410 42.500 160 87 1 172 331 73 227 2.98e-34 128
MS.gene48786.t1 MTR_6g011410 42.500 160 87 1 152 311 73 227 5.36e-34 127
MS.gene48786.t1 MTR_6g011410 40.881 159 94 0 143 301 69 227 1.22e-33 127
MS.gene48786.t1 MTR_6g011410 41.875 160 88 1 162 321 73 227 2.23e-33 126
MS.gene48786.t1 MTR_6g011410 41.875 160 88 1 192 351 73 227 2.28e-33 126
MS.gene48786.t1 MTR_6g011410 40.252 159 95 0 133 291 69 227 3.13e-33 125
MS.gene48786.t1 MTR_6g011410 41.875 160 88 1 182 341 73 227 3.16e-33 125
MS.gene48786.t1 MTR_6g011410 40.252 159 95 0 123 281 69 227 4.53e-33 125
MS.gene48786.t1 MTR_6g011410 40.909 154 91 0 207 360 73 226 6.96e-32 122
MS.gene48786.t1 MTR_6g011410 38.415 164 96 1 208 371 69 227 1.56e-30 118
MS.gene48786.t1 MTR_6g011410 41.509 159 93 0 218 376 69 227 1.73e-30 118
MS.gene48786.t1 MTR_6g011410 38.365 159 98 0 103 261 69 227 2.37e-30 118
MS.gene48786.t1 MTR_6g011410 42.581 155 89 0 202 356 73 227 2.96e-30 117
MS.gene48786.t1 MTR_6g011410 38.854 157 96 0 65 221 71 227 3.18e-30 117
MS.gene48786.t1 MTR_6g011410 37.870 169 95 2 73 241 69 227 8.68e-30 116
MS.gene48786.t1 MTR_6g011410 38.065 155 96 0 247 401 73 227 1.09e-29 116
MS.gene48786.t1 MTR_6g011410 38.065 155 96 0 277 431 73 227 1.88e-29 115
MS.gene48786.t1 MTR_6g011410 37.419 155 97 0 62 216 73 227 3.62e-29 114
MS.gene48786.t1 MTR_6g011410 36.585 164 99 1 43 206 69 227 4.62e-29 114
MS.gene48786.t1 MTR_6g011410 38.125 160 94 1 72 231 73 227 4.72e-29 114
MS.gene48786.t1 MTR_6g011410 37.805 164 97 1 228 391 69 227 5.95e-29 114
MS.gene48786.t1 MTR_6g011410 35.976 164 100 1 33 196 69 227 6.79e-29 114
MS.gene48786.t1 MTR_6g011410 38.710 155 95 0 257 411 73 227 7.66e-29 114
MS.gene48786.t1 MTR_6g011410 38.065 155 96 0 267 421 73 227 9.10e-29 113
MS.gene48786.t1 MTR_6g011410 39.610 154 93 0 243 396 74 227 9.57e-29 113
MS.gene48786.t1 MTR_6g011410 37.580 157 98 0 55 211 71 227 5.22e-28 111
MS.gene48786.t1 MTR_6g011410 37.255 153 96 0 287 439 73 225 1.84e-27 110
MS.gene48786.t1 MTR_6g011410 36.641 131 76 2 308 437 69 193 5.53e-17 80.5
MS.gene48786.t1 MTR_6g011410 35.714 112 70 2 328 438 69 179 7.51e-12 65.5
MS.gene48786.t1 MTR_4g029760 40.310 129 58 3 1 129 1 110 7.11e-15 70.9
MS.gene48786.t1 MTR_4g029760 49.412 85 41 2 201 284 27 110 1.48e-12 64.3
MS.gene48786.t1 MTR_4g029760 48.235 85 42 2 221 304 27 110 8.59e-12 62.0
MS.gene48786.t1 MTR_4g029760 48.235 85 42 2 241 324 27 110 3.96e-11 60.5
MS.gene48786.t1 MTR_4g029760 51.282 78 36 2 261 337 27 103 4.71e-11 60.1
MS.gene48786.t1 MTR_3g415650 46.465 99 50 2 1 96 1 99 3.58e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48786.t1 AT3G22142 43.154 482 208 4 24 439 910 1391 1.90e-86 288
MS.gene48786.t1 AT3G22142 44.328 476 199 4 30 439 876 1351 2.27e-86 288
MS.gene48786.t1 AT3G22142 43.461 497 200 6 24 439 885 1381 9.19e-86 286
MS.gene48786.t1 AT3G22142 40.590 542 196 7 24 439 680 1221 1.77e-82 277
MS.gene48786.t1 AT3G22142 41.556 527 197 6 24 439 735 1261 8.25e-82 275
MS.gene48786.t1 AT3G22142 43.011 465 189 4 24 412 930 1394 9.27e-82 275
MS.gene48786.t1 AT3G22142 41.055 531 197 6 25 439 666 1196 1.23e-80 272
MS.gene48786.t1 AT3G22142 39.852 542 200 6 24 439 750 1291 1.29e-79 269
MS.gene48786.t1 AT3G22142 41.879 511 196 6 30 439 626 1136 2.24e-76 259
MS.gene48786.t1 AT3G22142 39.252 535 205 6 25 439 501 1035 5.29e-72 247
MS.gene48786.t1 AT3G22142 37.590 556 207 7 24 439 520 1075 4.07e-71 244
MS.gene48786.t1 AT3G22142 37.828 571 200 7 24 439 370 940 1.15e-68 237
MS.gene48786.t1 AT3G22142 44.103 390 170 5 21 362 1005 1394 2.74e-68 236
MS.gene48786.t1 AT3G22142 37.138 552 207 7 24 435 415 966 3.55e-68 236
MS.gene48786.t1 AT3G22142 36.602 571 202 8 28 438 344 914 3.66e-68 236
MS.gene48786.t1 AT3G22142 36.427 571 208 7 24 439 385 955 6.24e-68 235
MS.gene48786.t1 AT3G22142 34.732 596 207 8 24 439 252 845 1.13e-65 228
MS.gene48786.t1 AT3G22142 37.163 557 206 10 24 439 202 755 7.69e-60 211
MS.gene48786.t1 AT3G22142 49.362 235 119 0 18 252 1160 1394 1.69e-41 158
MS.gene48786.t1 AT3G22142 39.516 124 55 1 27 130 1274 1397 2.40e-13 73.2
MS.gene48786.t1 AT1G54970 48.148 162 63 7 155 304 28 180 2.83e-14 73.9
MS.gene48786.t1 AT1G54970 44.172 163 69 6 280 434 28 176 2.04e-13 71.6
MS.gene48786.t1 AT1G54970 46.667 180 72 8 250 409 28 203 3.13e-13 70.9
MS.gene48786.t1 AT1G54970 38.308 201 89 9 1 189 3 180 1.32e-12 68.9
MS.gene48786.t1 AT1G54970 45.989 187 75 8 210 380 28 204 1.91e-12 68.6
MS.gene48786.t1 AT1G54970 46.626 163 69 8 270 424 28 180 3.86e-12 67.8
MS.gene48786.t1 AT1G54970 48.108 185 84 8 220 400 28 204 5.61e-12 67.0

Find 189 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTGGTGGCTTGTAAAT+TGG 0.089446 4.4:+73371279 None:intergenic
TCTACTGGTGGCTTGTAAAT+TGG 0.089446 4.4:+73371489 None:intergenic
TCAACTGGTGGCTTGTAAAT+TGG 0.137708 4.4:+73370844 None:intergenic
TCAAATGGTGGTTTGTAAAT+TGG 0.159851 4.4:+73370634 None:intergenic
TCTACTGGTGGCTTGTAAAC+TGG 0.163243 4.4:+73370904 None:intergenic
TCAACTGGTGGCTTGTAAAT+TGG 0.189823 4.4:+73371189 None:intergenic
TCTACTGGCGGTTTGTAAAT+TGG 0.198828 4.4:+73370574 None:intergenic
CAACTGGTGGCTTGTAAATT+GGG 0.242860 4.4:+73370845 None:intergenic
CTACTGGTGGCTTGTAAATT+GGG 0.242860 4.4:+73371280 None:intergenic
CTACTGGTGGCTTGTAAATT+GGG 0.242860 4.4:+73371490 None:intergenic
TCTACTGGCGGCTTGTAAAT+TGG 0.245316 4.4:+73371399 None:intergenic
TCTATTGGTGGCTTATAAAC+TGG 0.256409 4.4:+73370964 None:intergenic
TACACAGGTGGTTTCTCTAT+TGG 0.269356 4.4:+73370949 None:intergenic
TCTACGGGTGGTTTATAAAC+TGG 0.273009 4.4:+73371579 None:intergenic
TCAACCGGTGGCTTGTAAAT+AGG 0.274750 4.4:+73371129 None:intergenic
TCAACTGGAGGTTTATAAAA+TGG 0.292450 4.4:+73370454 None:intergenic
TCTACTGGTGGTTTGTATAT+AGG 0.305973 4.4:+73371249 None:intergenic
TCTACAGGTGGTTTGTAAAC+TGG 0.337913 4.4:+73370754 None:intergenic
CTCTACAGGTGGCTCGTAGA+TGG 0.340186 4.4:+73370513 None:intergenic
TTCAGGAGGTTTATCATAGT+TGG 0.347213 4.4:+73371626 None:intergenic
TCTACAGGTGGTTTGTAAAC+AGG 0.351216 4.4:+73370814 None:intergenic
TCGACTGGTGGCTTGTAAAC+AGG 0.366370 4.4:+73371159 None:intergenic
CTACTGGTGGCTTGTAAACT+GGG 0.367097 4.4:+73370905 None:intergenic
TACACTGGAGGTTTCTCAAC+TGG 0.370256 4.4:+73371009 None:intergenic
TCATAGTTGGCAAGCCCCTT+AGG 0.371862 4.4:+73371639 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4.4:+73370604 None:intergenic
TCAAATGGTGGCTTGTAAAC+AGG 0.371910 4.4:+73370664 None:intergenic
TAGACAGGAGGTTTCTCAAC+TGG 0.373909 4.4:+73371069 None:intergenic
TGCTCTCTTTGTCATCCCTA+AGG 0.380772 4.4:-73371655 MS.gene48786:CDS
TAAACGGGTGGCTGGTAAAC+AGG 0.384458 4.4:+73371099 None:intergenic
TCTACAGGTGGCTCGTAGAT+GGG 0.391692 4.4:+73370514 None:intergenic
TATATAGGTGGCTTCTCTAC+TGG 0.392320 4.4:+73371264 None:intergenic
TACACAGGTGGCTTCTCTAC+TGG 0.396236 4.4:+73371474 None:intergenic
TAAACAGGTGGCTTCTCAAC+TGG 0.397587 4.4:+73370829 None:intergenic
TATACAGGTGGTTTCTCTAC+TGG 0.398657 4.4:+73370889 None:intergenic
TCGTATGGAGGTTTGTAAAC+AGG 0.400341 4.4:+73370424 None:intergenic
TAAACTGGGGATTTCTCAAC+TGG 0.403697 4.4:+73370979 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4.4:+73370589 None:intergenic
TAAATTGGAGGTTTCTCAAA+TGG 0.409111 4.4:+73370649 None:intergenic
TAAACAGGAGGCTCCTCAAC+TGG 0.410023 4.4:+73370439 None:intergenic
TACACGGGTGGTTTCTCTAC+TGG 0.410414 4.4:+73371384 None:intergenic
TCTACAGGTGGCTTGTAAAC+CGG 0.412714 4.4:+73371429 None:intergenic
GCTCTCTTTGTCATCCCTAA+GGG 0.413698 4.4:-73371654 MS.gene48786:CDS
TACACAGGTGGTTTCTCAAC+CGG 0.415384 4.4:+73370709 None:intergenic
TCAACTGGTGGCTTGTACAC+CGG 0.424622 4.4:+73371024 None:intergenic
TCAAATGGTGGCTTGTACAC+AGG 0.426920 4.4:+73370544 None:intergenic
TAAACAGGAGGTTTCTCAAC+TGG 0.426984 4.4:+73371174 None:intergenic
TCAACTGGTGGATTATATTC+AGG 0.429790 4.4:+73371609 None:intergenic
TACACAGGTGGTTCCTCTAC+GGG 0.434677 4.4:+73371564 None:intergenic
TAAACTGGAGGCTTCTCAAC+CGG 0.439109 4.4:+73370769 None:intergenic
TCTACAGGTGGCTTGTACAC+AGG 0.439719 4.4:+73370694 None:intergenic
TCAACTGGTGGCTTGTACAC+AGG 0.445716 4.4:+73370934 None:intergenic
CTATTGGTGGCTTATAAACT+GGG 0.446930 4.4:+73370965 None:intergenic
GGATGACAAAGAGAGCAAAA+AGG 0.449281 4.4:+73371661 None:intergenic
TAGACGGGAGGTTGCTCTAC+TGG 0.451097 4.4:+73371234 None:intergenic
TCAACCGGCGGCTTGTATAC+AGG 0.452576 4.4:+73370874 None:intergenic
ACAGGTGGTTTCTCTATTGG+TGG 0.459500 4.4:+73370952 None:intergenic
TCAACCGGTGGCTTGTACAC+AGG 0.460989 4.4:+73370724 None:intergenic
TACACCGGTGGTTTCTCTAC+AGG 0.466097 4.4:+73370799 None:intergenic
GTACACAGGTGGTTCCTCTA+CGG 0.466134 4.4:+73371563 None:intergenic
CATAGTTGGCAAGCCCCTTA+GGG 0.469706 4.4:+73371640 None:intergenic
CTACGGGTGGTTTATAAACT+GGG 0.470080 4.4:+73371580 None:intergenic
TACACCGGTGGCTTCTCTAC+AGG 0.472138 4.4:+73371039 None:intergenic
TACGTAGGAGGTTTCTCTAC+AGG 0.474842 4.4:+73370499 None:intergenic
TCAACTGGTGGTTTGTACAC+TGG 0.475280 4.4:+73370994 None:intergenic
TCTACAGGTGGCTTGTAGAC+AGG 0.477895 4.4:+73371054 None:intergenic
CTACAGGTGGCTCGTAGATG+GGG 0.478069 4.4:+73370515 None:intergenic
TCAACCGGTGGCTTGTACAC+CGG 0.478251 4.4:+73370784 None:intergenic
TAAACCGGAGGTTTCTCTAC+TGG 0.478885 4.4:+73371444 None:intergenic
TAAACAGGTGGAATCTCAAA+TGG 0.481658 4.4:+73370619 None:intergenic
CTCGAACGGTGGTTTATACA+CGG 0.483753 4.4:+73371368 None:intergenic
AACTGGTGGCTTGTAAATTG+GGG 0.485575 4.4:+73370846 None:intergenic
TACTGGTGGCTTGTAAATTG+GGG 0.485575 4.4:+73371281 None:intergenic
TACTGGTGGCTTGTAAATTG+GGG 0.485575 4.4:+73371491 None:intergenic
CTCTACCGGTGGCTTATAGA+CGG 0.485999 4.4:+73371218 None:intergenic
AGGTAAGGTGGCCTCTAGAA+TGG 0.486082 4.4:+73370379 None:intergenic
TACACAGGAGGCTTCTCTAC+AGG 0.490362 4.4:+73370739 None:intergenic
AGACAGGAGGTTTCTCAACT+GGG 0.490831 4.4:+73371070 None:intergenic
AATGGTGGTTTGTAAATTGG+AGG 0.494893 4.4:+73370637 None:intergenic
TCGATTGGTGGATGGTAGAC+CGG 0.497835 4.4:+73371519 None:intergenic
TAAATTGGAGGCTTCTCTAC+CGG 0.500553 4.4:+73371204 None:intergenic
ACTGGTGGCTTGTAAATTGG+AGG 0.504597 4.4:+73371192 None:intergenic
TAAACAGGAGGTTTCTCAAC+CGG 0.505111 4.4:+73371114 None:intergenic
ACTGGCGGTTTGTAAATTGG+AGG 0.505224 4.4:+73370577 None:intergenic
TAGAATGGAGGAGTGTAAAT+CGG 0.506624 4.4:+73370394 None:intergenic
GGGGCTTGTAAACGGGTGGC+TGG 0.508050 4.4:+73371091 None:intergenic
AATGGAGGTTTCTCGAACGG+TGG 0.510085 4.4:+73371357 None:intergenic
TCTACTGGTGGTTTGTACAC+AGG 0.513567 4.4:+73371459 None:intergenic
TAAATAGGAGGTTTCTCGAC+TGG 0.516158 4.4:+73371144 None:intergenic
TAAATCGGTGGCTTCTCGTA+TGG 0.517724 4.4:+73370409 None:intergenic
GAGCAGCACTAGGAAGTTTG+AGG 0.517932 4.4:+73371683 None:intergenic
TACACAGGTGGAAACTCTAC+TGG 0.521675 4.4:+73370559 None:intergenic
TCTACCGGTGGATGGTAGAA+TGG 0.522100 4.4:+73371339 None:intergenic
TCAAATGGTGGTTTGTACAC+AGG 0.526891 4.4:+73371549 None:intergenic
CACAATGGTGGTATCTCTAC+CGG 0.529237 4.4:+73371324 None:intergenic
TACAGGTGGCTCGTAGATGG+GGG 0.540383 4.4:+73370516 None:intergenic
TAGACCGGAGGTTTCTCAAA+TGG 0.542548 4.4:+73371534 None:intergenic
CTCTCTTTGTCATCCCTAAG+GGG 0.544711 4.4:-73371653 MS.gene48786:CDS
ACTGGCGGCTTGTAAATTGG+AGG 0.546760 4.4:+73371402 None:intergenic
ACTGGTGGTTTGTATATAGG+TGG 0.547921 4.4:+73371252 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.550477 4.4:+73370847 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.550477 4.4:+73371492 None:intergenic
ACCGGAGGTTTCTCTACTGG+TGG 0.553526 4.4:+73371447 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4.4:+73370592 None:intergenic
ATTGGAGGTTTCTCAAATGG+TGG 0.554655 4.4:+73370652 None:intergenic
GTCGGAGGATTGTACGTAGG+AGG 0.561190 4.4:+73370487 None:intergenic
ACTGGGGATTTCTCAACTGG+TGG 0.564646 4.4:+73370982 None:intergenic
TCTACCGGTGGCTTATAGAC+GGG 0.564913 4.4:+73371219 None:intergenic
ATCGGTGGCTTCTCGTATGG+AGG 0.565965 4.4:+73370412 None:intergenic
TAAAATGGTGGATTGTCAGT+CGG 0.566011 4.4:+73370469 None:intergenic
TACTGGTGGCTTGTAAACTG+GGG 0.566731 4.4:+73370906 None:intergenic
ACCGGTGGCTTGTAAATAGG+AGG 0.567768 4.4:+73371132 None:intergenic
ACCGGTGGCTTGTACACCGG+TGG 0.571366 4.4:+73370787 None:intergenic
ACCTCCTATTTACAAGCCAC+CGG 0.571491 4.4:-73371133 MS.gene48786:CDS
GCCTCCTGTGTACAAGCCAC+CGG 0.571766 4.4:-73370728 MS.gene48786:CDS
ACCGGTGGTTTCTCTACAGG+TGG 0.572000 4.4:+73370802 None:intergenic
ACCGGAGGTTTCTCAAATGG+TGG 0.574468 4.4:+73371537 None:intergenic
ACAGGTGGCTTGTACACAGG+TGG 0.580231 4.4:+73370697 None:intergenic
TCGAACGGTGGTTTATACAC+GGG 0.581016 4.4:+73371369 None:intergenic
ACTGGAGGTTTCTCAACTGG+TGG 0.582035 4.4:+73371012 None:intergenic
ACAGGTGGTTTCTCTACTGG+TGG 0.582399 4.4:+73370892 None:intergenic
ACTGGTGGTTTGTACACTGG+AGG 0.583409 4.4:+73370997 None:intergenic
ACTGGAGGTTTATAAAATGG+TGG 0.586806 4.4:+73370457 None:intergenic
ACTGGTGGCTTGTAAATTGG+GGG 0.588708 4.4:+73371282 None:intergenic
ATAGGTGGCTTCTCTACTGG+TGG 0.598642 4.4:+73371267 None:intergenic
GTGGTATCTCTACCGGTGGA+TGG 0.599408 4.4:+73371331 None:intergenic
ACTGGTGGCTTGTAAACTGG+GGG 0.600648 4.4:+73370907 None:intergenic
ATTGGAGGCTTCTCTACCGG+TGG 0.601048 4.4:+73371207 None:intergenic
ATAGGAGGTTTCTCGACTGG+TGG 0.603727 4.4:+73371147 None:intergenic
GACAGGAGGTTTCTCAACTG+GGG 0.603997 4.4:+73371071 None:intergenic
AACGGTGGTTTATACACGGG+TGG 0.605717 4.4:+73371372 None:intergenic
ACTGGTGGTTTGTACACAGG+TGG 0.607164 4.4:+73371462 None:intergenic
AGTTTATAAACCACCCGTAG+AGG 0.608035 4.4:-73371577 MS.gene48786:CDS
ACAGGTGGCTTCTCTACTGG+TGG 0.608297 4.4:+73371477 None:intergenic
ACCACCATTTGAGAAACCTC+CGG 0.609108 4.4:-73371538 MS.gene48786:CDS
ACTGGTGGCTTGTACACAGG+TGG 0.611896 4.4:+73370937 None:intergenic
ACCTCCCGTCTATAAGCCAC+CGG 0.614032 4.4:-73371223 MS.gene48786:CDS
ACTGGTGGATTATATTCAGG+AGG 0.614972 4.4:+73371612 None:intergenic
ACCGGTGGCTTCTCTACAGG+TGG 0.616516 4.4:+73371042 None:intergenic
ACAGGAGGTTTCTCAACTGG+TGG 0.620067 4.4:+73371177 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.621352 4.4:+73370607 None:intergenic
ACAGGTGGTTTCTCAACCGG+TGG 0.621921 4.4:+73370712 None:intergenic
TTTACACTCCTCCATTCTAG+AGG 0.626055 4.4:-73370390 None:intergenic
ACAGGAGGTTTCTCAACTGG+GGG 0.626341 4.4:+73371072 None:intergenic
ACCTCCATTCTACCATCCAC+CGG 0.626622 4.4:-73371343 MS.gene48786:CDS
ACGGGAGGTTGCTCTACTGG+TGG 0.627982 4.4:+73371237 None:intergenic
AATGGTGGCTTGTAAACAGG+TGG 0.628173 4.4:+73370667 None:intergenic
ACCACCGGTGTACAAGCCAC+CGG 0.628704 4.4:-73370788 MS.gene48786:CDS
ACCGGTGGCTTATAGACGGG+AGG 0.629346 4.4:+73371222 None:intergenic
ACAGGTGGCTCGTAGATGGG+GGG 0.629370 4.4:+73370517 None:intergenic
ACAGGAGGCTTCTCTACAGG+TGG 0.630002 4.4:+73370742 None:intergenic
ACAGGTGGTTTGTAAACAGG+TGG 0.631583 4.4:+73370817 None:intergenic
ACAGGAGGTTTCTCAACCGG+TGG 0.631666 4.4:+73371117 None:intergenic
ACAGGTGGTTTGTAAACTGG+AGG 0.632113 4.4:+73370757 None:intergenic
TAGAATGGAGGTTTCTCGAA+CGG 0.632815 4.4:+73371354 None:intergenic
ACCACCTGTATACAAGCCGC+CGG 0.635832 4.4:-73370878 MS.gene48786:CDS
ACGGGTGGTTTCTCTACTGG+CGG 0.641147 4.4:+73371387 None:intergenic
ACAGGTGGTTCCTCTACGGG+TGG 0.641581 4.4:+73371567 None:intergenic
ACAGGTGGCTTGTAGACAGG+AGG 0.643242 4.4:+73371057 None:intergenic
ACAGGTGGAATCTCAAATGG+TGG 0.644163 4.4:+73370622 None:intergenic
AATGGTGGCTTGTACACAGG+TGG 0.644801 4.4:+73370547 None:intergenic
ACTGGAGGCTTCTCAACCGG+TGG 0.644887 4.4:+73370772 None:intergenic
ACTGGTGGCTTGTACACCGG+TGG 0.645745 4.4:+73371027 None:intergenic
AATGGTGGTTTGTACACAGG+TGG 0.645791 4.4:+73371552 None:intergenic
TACGGGTGGTTTATAAACTG+GGG 0.648391 4.4:+73371581 None:intergenic
ACCGGTGGCTTGTACACAGG+AGG 0.648771 4.4:+73370727 None:intergenic
GTAGGAGGTTTCTCTACAGG+TGG 0.648843 4.4:+73370502 None:intergenic
ATTGGTGGATGGTAGACCGG+AGG 0.649213 4.4:+73371522 None:intergenic
ACAGGTGGCTTCTCAACTGG+TGG 0.649432 4.4:+73370832 None:intergenic
ACCGGCGGCTTGTATACAGG+TGG 0.649588 4.4:+73370877 None:intergenic
AATGGTGGTATCTCTACCGG+TGG 0.651871 4.4:+73371327 None:intergenic
ACCGGTGGATGGTAGAATGG+AGG 0.651873 4.4:+73371342 None:intergenic
ACTGGTGGCTTGTAAACAGG+AGG 0.654690 4.4:+73371162 None:intergenic
TATGGAGGTTTGTAAACAGG+AGG 0.655898 4.4:+73370427 None:intergenic
AATGGTGGATTGTCAGTCGG+AGG 0.656084 4.4:+73370472 None:intergenic
ACAGGTGGCTTGTAAACCGG+AGG 0.659345 4.4:+73371432 None:intergenic
TAAGGTGGCCTCTAGAATGG+AGG 0.662226 4.4:+73370382 None:intergenic
ACCACCAGTAGAGAAACCTC+CGG 0.664962 4.4:-73371448 MS.gene48786:CDS
TATTGGTGGCTTATAAACTG+GGG 0.665356 4.4:+73370966 None:intergenic
ACGGGTGGTTTATAAACTGG+GGG 0.673772 4.4:+73371582 None:intergenic
ACAGGAGGCTCCTCAACTGG+AGG 0.674607 4.4:+73370442 None:intergenic
AATGGAGGAGTGTAAATCGG+TGG 0.681676 4.4:+73370397 None:intergenic
ACTGGTGGGTTACACAATGG+TGG 0.682821 4.4:+73371312 None:intergenic
ACCACCTGTAGAGAAACCAC+CGG 0.690613 4.4:-73370803 MS.gene48786:CDS
GCCACCTGTAGAGAAGCCAC+CGG 0.690613 4.4:-73371043 MS.gene48786:CDS
ACGGGTGGCTGGTAAACAGG+AGG 0.698135 4.4:+73371102 None:intergenic
ACAGGTGGAAACTCTACTGG+CGG 0.705018 4.4:+73370562 None:intergenic
TCAGTCGGAGGATTGTACGT+AGG 0.717151 4.4:+73370484 None:intergenic
TCAACTGGTGGGTTACACAA+TGG 0.739388 4.4:+73371309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
TAAATTGGAGGTTTCTCAAA+TGG + chr4.4:73371437-73371456 None:intergenic 30.0%
TCAACTGGAGGTTTATAAAA+TGG + chr4.4:73371632-73371651 None:intergenic 30.0%
! ATTTTATAAACCTCCAGTTG+AGG - chr4.4:73371631-73371650 MS.gene48786:CDS 30.0%
! TAAATTGGAGGATTTTCTAC+AGG + chr4.4:73370672-73370691 None:intergenic 30.0%
! TCAAATGGTGGTTTGTAAAT+TGG + chr4.4:73371452-73371471 None:intergenic 30.0%
ACTGGAGGTTTATAAAATGG+TGG + chr4.4:73371629-73371648 None:intergenic 35.0%
TAAACAGGTGGAATCTCAAA+TGG + chr4.4:73371467-73371486 None:intergenic 35.0%
TTCAGGAGGTTTATCATAGT+TGG + chr4.4:73370460-73370479 None:intergenic 35.0%
! AATGGTGGTTTGTAAATTGG+AGG + chr4.4:73371449-73371468 None:intergenic 35.0%
! CTATTGGTGGCTTATAAACT+GGG + chr4.4:73371121-73371140 None:intergenic 35.0%
! TAGAATGGAGGAGTGTAAAT+CGG + chr4.4:73371692-73371711 None:intergenic 35.0%
! TATTGGTGGCTTATAAACTG+GGG + chr4.4:73371120-73371139 None:intergenic 35.0%
! TCTACTGGTGGTTTGTATAT+AGG + chr4.4:73370837-73370856 None:intergenic 35.0%
! TCTATTGGTGGCTTATAAAC+TGG + chr4.4:73371122-73371141 None:intergenic 35.0%
!! TAAAATGGTGGATTGTCAGT+CGG + chr4.4:73371617-73371636 None:intergenic 35.0%
!! TAAACAGGTGGATTTTCTAC+AGG + chr4.4:73371407-73371426 None:intergenic 35.0%
!! TCAACTGGTGGATTATATTC+AGG + chr4.4:73370477-73370496 None:intergenic 35.0%
AGTTTATAAACCACCCGTAG+AGG - chr4.4:73370506-73370525 MS.gene48786:CDS 40.0%
ATTGGAGGTTTCTCAAATGG+TGG + chr4.4:73371434-73371453 None:intergenic 40.0%
CTACGGGTGGTTTATAAACT+GGG + chr4.4:73370506-73370525 None:intergenic 40.0%
GGATGACAAAGAGAGCAAAA+AGG + chr4.4:73370425-73370444 None:intergenic 40.0%
TAAACAGGAGGTTTCTCAAC+CGG + chr4.4:73370912-73370931 None:intergenic 40.0%
TAAACAGGAGGTTTCTCAAC+TGG + chr4.4:73370912-73370931 None:intergenic 40.0%
TAAACTGGGGATTTCTCAAC+TGG + chr4.4:73371107-73371126 None:intergenic 40.0%
TAAATAGGAGGTTTCTCGAC+TGG + chr4.4:73370942-73370961 None:intergenic 40.0%
TAAATTGGAGGCTTCTCTAC+CGG + chr4.4:73370882-73370901 None:intergenic 40.0%
TAAATTGGGGGATGTTCAAC+TGG + chr4.4:73370792-73370811 None:intergenic 40.0%
TACACAGGTGGTTTCTCTAT+TGG + chr4.4:73371137-73371156 None:intergenic 40.0%
TACGGGTGGTTTATAAACTG+GGG + chr4.4:73370505-73370524 None:intergenic 40.0%
TAGAATGGAGGTTTCTCGAA+CGG + chr4.4:73370732-73370751 None:intergenic 40.0%
TATACAGGTGGTTTCTCTAC+TGG + chr4.4:73371197-73371216 None:intergenic 40.0%
TATATAGGTGGCTTCTCTAC+TGG + chr4.4:73370822-73370841 None:intergenic 40.0%
TATGGAGGTTTGTAAACAGG+AGG + chr4.4:73371659-73371678 None:intergenic 40.0%
TCGTATGGAGGTTTGTAAAC+AGG + chr4.4:73371662-73371681 None:intergenic 40.0%
TCTACGGGTGGTTTATAAAC+TGG + chr4.4:73370507-73370526 None:intergenic 40.0%
TCTACTGGCGGTTTGTAAAT+TGG + chr4.4:73371512-73371531 None:intergenic 40.0%
! AACTGGTGGCTTGTAAATTG+GGG + chr4.4:73370895-73370914 None:intergenic 40.0%
! ACTGGTGGTTTGTATATAGG+TGG + chr4.4:73370834-73370853 None:intergenic 40.0%
! ATTGGAGGATTTTCTACAGG+TGG + chr4.4:73370669-73370688 None:intergenic 40.0%
! CAACTGGTGGCTTGTAAATT+GGG + chr4.4:73370896-73370915 None:intergenic 40.0%
! CTACTGGTGGCTTGTAAATT+GGG + chr4.4:73370596-73370615 None:intergenic 40.0%
! TAAATTGGGGGCTTTTCGAT+TGG + chr4.4:73370582-73370601 None:intergenic 40.0%
! TACTGGTGGCTTGTAAATTG+GGG + chr4.4:73370595-73370614 None:intergenic 40.0%
! TCAAATGGTGGCTTGTAAAC+AGG + chr4.4:73371422-73371441 None:intergenic 40.0%
! TCAAATGGTGGTTTGTACAC+AGG + chr4.4:73370537-73370556 None:intergenic 40.0%
! TCAACTGGTGGCTTGTAAAT+TGG + chr4.4:73370897-73370916 None:intergenic 40.0%
! TCTACAGGTGGTTTGTAAAC+AGG + chr4.4:73371272-73371291 None:intergenic 40.0%
! TCTACAGGTGGTTTGTAAAC+TGG + chr4.4:73371272-73371291 None:intergenic 40.0%
! TCTACTGGTGGCTTGTAAAT+TGG + chr4.4:73370597-73370616 None:intergenic 40.0%
!! ACTGGTGGATTATATTCAGG+AGG + chr4.4:73370474-73370493 None:intergenic 40.0%
ACAGGTGGAATCTCAAATGG+TGG + chr4.4:73371464-73371483 None:intergenic 45.0%
ACAGGTGGTTTCTCTATTGG+TGG + chr4.4:73371134-73371153 None:intergenic 45.0%
ACCACCATTTGAGAAACCTC+CGG - chr4.4:73370545-73370564 MS.gene48786:CDS 45.0%
ACCTCCTATTTACAAGCCAC+CGG - chr4.4:73370950-73370969 MS.gene48786:CDS 45.0%
ACGGGTGGTTTATAAACTGG+GGG + chr4.4:73370504-73370523 None:intergenic 45.0%
ACTGGCGGTTTGTAAATTGG+AGG + chr4.4:73371509-73371528 None:intergenic 45.0%
AGACAGGAGGTTTCTCAACT+GGG + chr4.4:73371016-73371035 None:intergenic 45.0%
CACAATGGTGGTATCTCTAC+CGG + chr4.4:73370762-73370781 None:intergenic 45.0%
CTCGAACGGTGGTTTATACA+CGG + chr4.4:73370718-73370737 None:intergenic 45.0%
CTCTCTTTGTCATCCCTAAG+GGG - chr4.4:73370430-73370449 MS.gene48786:CDS 45.0%
GCTCTCTTTGTCATCCCTAA+GGG - chr4.4:73370429-73370448 MS.gene48786:CDS 45.0%
TAAACAGGTGGCTTCTCAAC+TGG + chr4.4:73371257-73371276 None:intergenic 45.0%
TAAACCGGAGGTTTCTCTAC+TGG + chr4.4:73370642-73370661 None:intergenic 45.0%
TAAACTGGAGGCTTCTCAAC+CGG + chr4.4:73371317-73371336 None:intergenic 45.0%
TAAATCGGTGGCTTCTCGTA+TGG + chr4.4:73371677-73371696 None:intergenic 45.0%
TAAATTGGGGGCTTCTCAAC+CGG + chr4.4:73371227-73371246 None:intergenic 45.0%
TACACAGGTGGAAACTCTAC+TGG + chr4.4:73371527-73371546 None:intergenic 45.0%
TACACAGGTGGTTTCTCAAC+CGG + chr4.4:73371377-73371396 None:intergenic 45.0%
TACACTGGAGGTTTCTCAAC+TGG + chr4.4:73371077-73371096 None:intergenic 45.0%
TACGTAGGAGGTTTCTCTAC+AGG + chr4.4:73371587-73371606 None:intergenic 45.0%
TAGACAGGAGGTTTCTCAAC+TGG + chr4.4:73371017-73371036 None:intergenic 45.0%
TAGACCGGAGGTTTCTCAAA+TGG + chr4.4:73370552-73370571 None:intergenic 45.0%
TAGATGGGGGGTTTCTCAAA+TGG + chr4.4:73371557-73371576 None:intergenic 45.0%
TCGAACGGTGGTTTATACAC+GGG + chr4.4:73370717-73370736 None:intergenic 45.0%
TCTACTGGCGGCTTGTAAAT+TGG + chr4.4:73370687-73370706 None:intergenic 45.0%
TGCTCTCTTTGTCATCCCTA+AGG - chr4.4:73370428-73370447 MS.gene48786:CDS 45.0%
! AATGGAGGAGTGTAAATCGG+TGG + chr4.4:73371689-73371708 None:intergenic 45.0%
! AATGGTGGCTTGTAAACAGG+TGG + chr4.4:73371419-73371438 None:intergenic 45.0%
! AATGGTGGTTTGTACACAGG+TGG + chr4.4:73370534-73370553 None:intergenic 45.0%
! ACAGGTGGTTTGTAAACAGG+TGG + chr4.4:73371269-73371288 None:intergenic 45.0%
! ACAGGTGGTTTGTAAACTGG+AGG + chr4.4:73371329-73371348 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+AGG + chr4.4:73370594-73370613 None:intergenic 45.0%
! ACTGGTGGCTTGTAAATTGG+GGG + chr4.4:73370594-73370613 None:intergenic 45.0%
! CTACTGGTGGCTTGTAAACT+GGG + chr4.4:73371181-73371200 None:intergenic 45.0%
! TACTGGTGGCTTGTAAACTG+GGG + chr4.4:73371180-73371199 None:intergenic 45.0%
! TCAAATGGTGGCTTGTACAC+AGG + chr4.4:73371542-73371561 None:intergenic 45.0%
! TCAACCGGTGGCTTGTAAAT+AGG + chr4.4:73370957-73370976 None:intergenic 45.0%
! TCAACTGGTGGTTTGTACAC+TGG + chr4.4:73371092-73371111 None:intergenic 45.0%
! TCTACAGGTGGCTTGTAAAC+CGG + chr4.4:73370657-73370676 None:intergenic 45.0%
! TCTACTGGTGGCTTGTAAAC+TGG + chr4.4:73371182-73371201 None:intergenic 45.0%
! TCTACTGGTGGTTTGTACAC+AGG + chr4.4:73370627-73370646 None:intergenic 45.0%
!! ACAGGTGGATTTTCTACAGG+TGG + chr4.4:73371404-73371423 None:intergenic 45.0%
!! TCAACTGGTGGGTTACACAA+TGG + chr4.4:73370777-73370796 None:intergenic 45.0%
AACGGTGGTTTATACACGGG+TGG + chr4.4:73370714-73370733 None:intergenic 50.0%
AATGGAGGTTTCTCGAACGG+TGG + chr4.4:73370729-73370748 None:intergenic 50.0%
AATGGTGGTATCTCTACCGG+TGG + chr4.4:73370759-73370778 None:intergenic 50.0%
ACAGGAGGTTTCTCAACTGG+GGG + chr4.4:73370909-73370928 None:intergenic 50.0%
ACAGGAGGTTTCTCAACTGG+TGG + chr4.4:73370909-73370928 None:intergenic 50.0%
ACAGGTGGAAACTCTACTGG+CGG + chr4.4:73371524-73371543 None:intergenic 50.0%
ACAGGTGGTTTCTCTACTGG+TGG + chr4.4:73371194-73371213 None:intergenic 50.0%
ACCACCAGTAGAGAAACCTC+CGG - chr4.4:73370635-73370654 MS.gene48786:CDS 50.0%
ACCACCTGTAGAGAAACCAC+CGG - chr4.4:73371280-73371299 MS.gene48786:CDS 50.0%
ACCGGAGGTTTCTCAAATGG+TGG + chr4.4:73370549-73370568 None:intergenic 50.0%
ACCTCCATTCTACCATCCAC+CGG - chr4.4:73370740-73370759 MS.gene48786:CDS 50.0%
ACTGGAGGTTTCTCAACTGG+TGG + chr4.4:73371074-73371093 None:intergenic 50.0%
ACTGGCGGCTTGTAAATTGG+AGG + chr4.4:73370684-73370703 None:intergenic 50.0%
ACTGGGGATTTCTCAACTGG+TGG + chr4.4:73371104-73371123 None:intergenic 50.0%
ATAGGAGGTTTCTCGACTGG+TGG + chr4.4:73370939-73370958 None:intergenic 50.0%
ATAGGTGGCTTCTCTACTGG+TGG + chr4.4:73370819-73370838 None:intergenic 50.0%
ATGGGGGGTTTCTCAAATGG+TGG + chr4.4:73371554-73371573 None:intergenic 50.0%
ATTGGGGGATGTTCAACTGG+TGG + chr4.4:73370789-73370808 None:intergenic 50.0%
CATAGTTGGCAAGCCCCTTA+GGG + chr4.4:73370446-73370465 None:intergenic 50.0%
CTCAACTGGGGGCTTGTAAA+CGG + chr4.4:73371003-73371022 None:intergenic 50.0%
CTCTACCGGTGGCTTATAGA+CGG + chr4.4:73370868-73370887 None:intergenic 50.0%
GACAGGAGGTTTCTCAACTG+GGG + chr4.4:73371015-73371034 None:intergenic 50.0%
GAGCAAAAAGGAGCAGCACT+AGG + chr4.4:73370413-73370432 None:intergenic 50.0%
GAGCAGCACTAGGAAGTTTG+AGG + chr4.4:73370403-73370422 None:intergenic 50.0%
GTACACAGGTGGTTCCTCTA+CGG + chr4.4:73370523-73370542 None:intergenic 50.0%
GTAGGAGGTTTCTCTACAGG+TGG + chr4.4:73371584-73371603 None:intergenic 50.0%
TAAACAGGAGGCTCCTCAAC+TGG + chr4.4:73371647-73371666 None:intergenic 50.0%
TAAACGGGTGGCTGGTAAAC+AGG + chr4.4:73370987-73371006 None:intergenic 50.0%
TAAACTGGGGGATGCTCAAC+TGG + chr4.4:73370492-73370511 None:intergenic 50.0%
TAAACTGGGGGCTTCTCAAC+TGG + chr4.4:73371167-73371186 None:intergenic 50.0%
TACACAGGAGGCTTCTCTAC+AGG + chr4.4:73371347-73371366 None:intergenic 50.0%
TACACAGGTGGCTTCTCTAC+TGG + chr4.4:73370612-73370631 None:intergenic 50.0%
TACACAGGTGGTTCCTCTAC+GGG + chr4.4:73370522-73370541 None:intergenic 50.0%
TACACCGGTGGTTTCTCTAC+AGG + chr4.4:73371287-73371306 None:intergenic 50.0%
TACACGGGTGGTTTCTCTAC+TGG + chr4.4:73370702-73370721 None:intergenic 50.0%
TCAACTGGGGGCTTGTAAAC+GGG + chr4.4:73371002-73371021 None:intergenic 50.0%
TCAGTCGGAGGATTGTACGT+AGG + chr4.4:73371602-73371621 None:intergenic 50.0%
TCATAGTTGGCAAGCCCCTT+AGG + chr4.4:73370447-73370466 None:intergenic 50.0%
TCTACAGGTGGCTCGTAGAT+GGG + chr4.4:73371572-73371591 None:intergenic 50.0%
TCTACCGGTGGATGGTAGAA+TGG + chr4.4:73370747-73370766 None:intergenic 50.0%
TCTACCGGTGGCTTATAGAC+GGG + chr4.4:73370867-73370886 None:intergenic 50.0%
TTGGGGGATGTTCAACTGGT+GGG + chr4.4:73370788-73370807 None:intergenic 50.0%
! AATGGTGGCTTGTACACAGG+TGG + chr4.4:73371539-73371558 None:intergenic 50.0%
! ACCGGTGGCTTGTAAATAGG+AGG + chr4.4:73370954-73370973 None:intergenic 50.0%
! ACTGGTGGCTTGTAAACAGG+AGG + chr4.4:73370924-73370943 None:intergenic 50.0%
! ACTGGTGGCTTGTAAACTGG+GGG + chr4.4:73371179-73371198 None:intergenic 50.0%
! ACTGGTGGTTTGTACACAGG+TGG + chr4.4:73370624-73370643 None:intergenic 50.0%
! ACTGGTGGTTTGTACACTGG+AGG + chr4.4:73371089-73371108 None:intergenic 50.0%
! ATTGGGGGCTTTTCGATTGG+TGG + chr4.4:73370579-73370598 None:intergenic 50.0%
! TCAACTGGTGGCTTGTACAC+AGG + chr4.4:73371062-73371081 None:intergenic 50.0%
! TCAACTGGTGGCTTGTACAC+CGG + chr4.4:73371062-73371081 None:intergenic 50.0%
! TCGACTGGTGGCTTGTAAAC+AGG + chr4.4:73370927-73370946 None:intergenic 50.0%
! TCGATTGGTGGATGGTAGAC+CGG + chr4.4:73370567-73370586 None:intergenic 50.0%
! TCTACAGGTGGCTTGTACAC+AGG + chr4.4:73371392-73371411 None:intergenic 50.0%
! TCTACAGGTGGCTTGTAGAC+AGG + chr4.4:73371032-73371051 None:intergenic 50.0%
!! AATGGTGGATTGTCAGTCGG+AGG + chr4.4:73371614-73371633 None:intergenic 50.0%
!! ACTGGTGGGTTACACAATGG+TGG + chr4.4:73370774-73370793 None:intergenic 50.0%
ACAGGAGGCTTCTCTACAGG+TGG + chr4.4:73371344-73371363 None:intergenic 55.0%
ACAGGAGGTTTCTCAACCGG+TGG + chr4.4:73370969-73370988 None:intergenic 55.0%
ACAGGTGGCTTCTCAACTGG+TGG + chr4.4:73371254-73371273 None:intergenic 55.0%
ACAGGTGGCTTCTCTACTGG+TGG + chr4.4:73370609-73370628 None:intergenic 55.0%
ACAGGTGGTTTCTCAACCGG+TGG + chr4.4:73371374-73371393 None:intergenic 55.0%
ACCACCTGTATACAAGCCGC+CGG - chr4.4:73371205-73371224 MS.gene48786:CDS 55.0%
ACCGGAGGTTTCTCTACTGG+TGG + chr4.4:73370639-73370658 None:intergenic 55.0%
ACCGGTGGATGGTAGAATGG+AGG + chr4.4:73370744-73370763 None:intergenic 55.0%
ACCGGTGGTTTCTCTACAGG+TGG + chr4.4:73371284-73371303 None:intergenic 55.0%
ACCTCCCGTCTATAAGCCAC+CGG - chr4.4:73370860-73370879 MS.gene48786:CDS 55.0%
ACGGGTGGTTTCTCTACTGG+CGG + chr4.4:73370699-73370718 None:intergenic 55.0%
ATCGGTGGCTTCTCGTATGG+AGG + chr4.4:73371674-73371693 None:intergenic 55.0%
ATTGGAGGCTTCTCTACCGG+TGG + chr4.4:73370879-73370898 None:intergenic 55.0%
CTACAGGTGGCTCGTAGATG+GGG + chr4.4:73371571-73371590 None:intergenic 55.0%
CTCTACAGGTGGCTCGTAGA+TGG + chr4.4:73371573-73371592 None:intergenic 55.0%
GTCGGAGGATTGTACGTAGG+AGG + chr4.4:73371599-73371618 None:intergenic 55.0%
GTGGTATCTCTACCGGTGGA+TGG + chr4.4:73370755-73370774 None:intergenic 55.0%
TACACCGGTGGCTTCTCTAC+AGG + chr4.4:73371047-73371066 None:intergenic 55.0%
TACAGGTGGCTCGTAGATGG+GGG + chr4.4:73371570-73371589 None:intergenic 55.0%
TAGACGGGAGGTTGCTCTAC+TGG + chr4.4:73370852-73370871 None:intergenic 55.0%
TCAACCGGCGGCTTGTATAC+AGG + chr4.4:73371212-73371231 None:intergenic 55.0%
! ACAGGTGGCTTGTAAACCGG+AGG + chr4.4:73370654-73370673 None:intergenic 55.0%
! ACAGGTGGCTTGTACACAGG+TGG + chr4.4:73371389-73371408 None:intergenic 55.0%
! ACAGGTGGCTTGTAGACAGG+AGG + chr4.4:73371029-73371048 None:intergenic 55.0%
! ACTGGTGGCTTGTACACAGG+TGG + chr4.4:73371149-73371168 None:intergenic 55.0%
! ATTGGTGGATGGTAGACCGG+AGG + chr4.4:73370564-73370583 None:intergenic 55.0%
! GGGGCTTTTCGATTGGTGGA+TGG + chr4.4:73370575-73370594 None:intergenic 55.0%
! TCAACCGGTGGCTTGTACAC+AGG + chr4.4:73371302-73371321 None:intergenic 55.0%
! TCAACCGGTGGCTTGTACAC+CGG + chr4.4:73371302-73371321 None:intergenic 55.0%
ACAGGAGGCTCCTCAACTGG+AGG + chr4.4:73371644-73371663 None:intergenic 60.0%
ACAGGTGGCTCGTAGATGGG+GGG + chr4.4:73371569-73371588 None:intergenic 60.0%
ACAGGTGGTTCCTCTACGGG+TGG + chr4.4:73370519-73370538 None:intergenic 60.0%
ACCACCGGTGTACAAGCCAC+CGG - chr4.4:73371295-73371314 MS.gene48786:CDS 60.0%
ACCGGCGGCTTGTATACAGG+TGG + chr4.4:73371209-73371228 None:intergenic 60.0%
ACCGGTGGCTTATAGACGGG+AGG + chr4.4:73370864-73370883 None:intergenic 60.0%
ACCGGTGGCTTCTCTACAGG+TGG + chr4.4:73371044-73371063 None:intergenic 60.0%
ACGGGAGGTTGCTCTACTGG+TGG + chr4.4:73370849-73370868 None:intergenic 60.0%
ACGGGTGGCTGGTAAACAGG+AGG + chr4.4:73370984-73371003 None:intergenic 60.0%
ACTGGAGGCTTCTCAACCGG+TGG + chr4.4:73371314-73371333 None:intergenic 60.0%
ACTGGGGGATGCTCAACTGG+TGG + chr4.4:73370489-73370508 None:intergenic 60.0%
ACTGGGGGCTTCTCAACTGG+TGG + chr4.4:73371164-73371183 None:intergenic 60.0%
ACTGGGGGCTTGTAAACGGG+TGG + chr4.4:73370999-73371018 None:intergenic 60.0%
ATTGGGGGCTTCTCAACCGG+CGG + chr4.4:73371224-73371243 None:intergenic 60.0%
GCCACCTGTAGAGAAGCCAC+CGG - chr4.4:73371040-73371059 MS.gene48786:CDS 60.0%
GCCTCCTGTGTACAAGCCAC+CGG - chr4.4:73371355-73371374 MS.gene48786:CDS 60.0%
! ACCGGTGGCTTGTACACAGG+AGG + chr4.4:73371359-73371378 None:intergenic 60.0%
! ACTGGTGGCTTGTACACCGG+TGG + chr4.4:73371059-73371078 None:intergenic 60.0%
GGGGCTTGTAAACGGGTGGC+TGG + chr4.4:73370995-73371014 None:intergenic 65.0%
! ACCGGTGGCTTGTACACCGG+TGG + chr4.4:73371299-73371318 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 73370393 73371712 73370393 ID=MS.gene48786
chr4.4 mRNA 73370393 73371712 73370393 ID=MS.gene48786.t1;Parent=MS.gene48786
chr4.4 exon 73370393 73371712 73370393 ID=MS.gene48786.t1.exon1;Parent=MS.gene48786.t1
chr4.4 CDS 73370393 73371712 73370393 ID=cds.MS.gene48786.t1;Parent=MS.gene48786.t1
Gene Sequence

>MS.gene48786

ATGGCTTCCTCAAACTTCCTAGTGCTGCTCCTTTTTGCTCTCTTTGTCATCCCTAAGGGGCTTGCCAACTATGATAAACCTCCTGAATATAATCCACCAGTTGAGCATCCCCCAGTTTATAAACCACCCGTAGAGGAACCACCTGTGTACAAACCACCATTTGAGAAACCTCCGGTCTACCATCCACCAATCGAAAAGCCCCCAATTTACAAGCCACCAGTAGAGAAGCCACCTGTGTACAAACCACCAGTAGAGAAACCTCCGGTTTACAAGCCACCTGTAGAAAATCCTCCAATTTACAAGCCGCCAGTAGAGAAACCACCCGTGTATAAACCACCGTTCGAGAAACCTCCATTCTACCATCCACCGGTAGAGATACCACCATTGTGTAACCCACCAGTTGAACATCCCCCAATTTACAAGCCACCAGTAGAGAAGCCACCTATATACAAACCACCAGTAGAGCAACCTCCCGTCTATAAGCCACCGGTAGAGAAGCCTCCAATTTACAAGCCACCAGTTGAGAAACCTCCTGTTTACAAGCCACCAGTCGAGAAACCTCCTATTTACAAGCCACCGGTTGAGAAACCTCCTGTTTACCAGCCACCCGTTTACAAGCCCCCAGTTGAGAAACCTCCTGTCTACAAGCCACCTGTAGAGAAGCCACCGGTGTACAAGCCACCAGTTGAGAAACCTCCAGTGTACAAACCACCAGTTGAGAAATCCCCAGTTTATAAGCCACCAATAGAGAAACCACCTGTGTACAAGCCACCAGTTGAGAAGCCCCCAGTTTACAAGCCACCAGTAGAGAAACCACCTGTATACAAGCCGCCGGTTGAGAAGCCCCCAATTTACAAGCCACCAGTTGAGAAGCCACCTGTTTACAAACCACCTGTAGAGAAACCACCGGTGTACAAGCCACCGGTTGAGAAGCCTCCAGTTTACAAACCACCTGTAGAGAAGCCTCCTGTGTACAAGCCACCGGTTGAGAAACCACCTGTGTACAAGCCACCTGTAGAAAATCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCACCATTTGAGATTCCACCTGTTTACAAGCCACCATTTGAGAAACCTCCAATTTACAAACCGCCAGTAGAGTTTCCACCTGTGTACAAGCCACCATTTGAGAAACCCCCCATCTACGAGCCACCTGTAGAGAAACCTCCTACGTACAATCCTCCGACTGACAATCCACCATTTTATAAACCTCCAGTTGAGGAGCCTCCTGTTTACAAACCTCCATACGAGAAGCCACCGATTTACACTCCTCCATTCTAG
Protein sequence

>MS.gene48786.t1

MASSNFLVLLLFALFVIPKGLANYDKPPEYNPPVEHPPVYKPPVEEPPVYKPPFEKPPVYHPPIEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVENPPIYKPPVEKPPVYKPPFEKPPFYHPPVEIPPLCNPPVEHPPIYKPPVEKPPIYKPPVEQPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYQPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKSPVYKPPIEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPIYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVENPPVYKPPFEKPPIYKPPFEIPPVYKPPFEKPPIYKPPVEFPPVYKPPFEKPPIYEPPVEKPPTYNPPTDNPPFYKPPVEEPPVYKPPYEKPPIYTPPF