Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50183.t1 | XP_003615711.1 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.00E+00 | 1182.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50183.t1 | P19252 | 93.0 | 583 | 29 | 2 | 1 | 572 | 1 | 582 | 0.0e+00 | 1126.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50183.t1 | G7JZK0 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0e+00 | 1182.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene50183 | MS.gene071169 | PPI |
MS.gene30955 | MS.gene50183 | PPI |
MS.gene021114 | MS.gene50183 | PPI |
MS.gene50183 | MS.gene75475 | PPI |
MS.gene79217 | MS.gene50183 | PPI |
MS.gene50183 | MS.gene045117 | PPI |
MS.gene50183 | MS.gene31156 | PPI |
MS.gene052207 | MS.gene50183 | PPI |
MS.gene50183 | MS.gene41176 | PPI |
MS.gene50183 | MS.gene004045 | PPI |
MS.gene50183 | MS.gene052122 | PPI |
MS.gene50183 | MS.gene45489 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50183.t1 | MTR_5g071360 | 97.774 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0 | 1186 |
MS.gene50183.t1 | MTR_5g071360 | 97.451 | 510 | 2 | 1 | 1 | 499 | 1 | 510 | 0.0 | 1037 |
MS.gene50183.t1 | MTR_3g464580 | 84.471 | 586 | 78 | 3 | 1 | 573 | 1 | 586 | 0.0 | 1030 |
MS.gene50183.t1 | MTR_3g464580 | 85.658 | 509 | 61 | 2 | 1 | 497 | 1 | 509 | 0.0 | 917 |
MS.gene50183.t1 | MTR_3g087220 | 76.619 | 556 | 119 | 1 | 1 | 545 | 1 | 556 | 0.0 | 912 |
MS.gene50183.t1 | MTR_3g464580 | 85.045 | 448 | 54 | 3 | 1 | 436 | 1 | 447 | 0.0 | 795 |
MS.gene50183.t1 | MTR_5g069310 | 93.662 | 142 | 9 | 0 | 432 | 573 | 2 | 143 | 6.24e-93 | 281 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50183.t1 | AT3G47340 | 81.565 | 575 | 88 | 2 | 1 | 564 | 1 | 568 | 0.0 | 992 |
MS.gene50183.t1 | AT5G10240 | 77.544 | 570 | 117 | 1 | 1 | 559 | 1 | 570 | 0.0 | 944 |
MS.gene50183.t1 | AT5G10240 | 77.018 | 570 | 119 | 2 | 1 | 559 | 1 | 569 | 0.0 | 934 |
MS.gene50183.t1 | AT5G65010 | 78.364 | 550 | 108 | 1 | 1 | 539 | 1 | 550 | 0.0 | 928 |
MS.gene50183.t1 | AT5G65010 | 78.403 | 551 | 107 | 2 | 1 | 539 | 1 | 551 | 0.0 | 925 |
MS.gene50183.t1 | AT3G47340 | 83.465 | 508 | 73 | 1 | 1 | 497 | 1 | 508 | 0.0 | 904 |
MS.gene50183.t1 | AT3G47340 | 82.974 | 417 | 60 | 1 | 1 | 406 | 1 | 417 | 0.0 | 740 |
MS.gene50183.t1 | AT3G47340 | 86.379 | 301 | 41 | 0 | 106 | 406 | 2 | 302 | 0.0 | 558 |
Find 144 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCATAGTTGATCCTGCTTC+TGG | 0.190792 | 5.4:+62539748 | MS.gene50183:CDS |
CCTTTCGGTGTTCTACTATC+TGG | 0.286968 | 5.4:+62541215 | MS.gene50183:CDS |
TAGTATGCTTCCTTGGTGTT+TGG | 0.294339 | 5.4:-62542876 | None:intergenic |
CTTGGTGTTTGGGGTGTTGT+GGG | 0.299374 | 5.4:-62542865 | None:intergenic |
AGTATGCTTCCTTGGTGTTT+GGG | 0.315403 | 5.4:-62542875 | None:intergenic |
TGGTGAAACTCTTCCTTGTT+TGG | 0.317778 | 5.4:-62541984 | None:intergenic |
CTTGATTAGTACGAGGAATA+TGG | 0.320124 | 5.4:+62540396 | MS.gene50183:intron |
CCAATCCCCAACCAATGTAT+AGG | 0.322005 | 5.4:-62540521 | None:intergenic |
CTGTTGAGTGGGATGCTTCT+TGG | 0.325762 | 5.4:+62543279 | MS.gene50183:CDS |
CCTTGGTGTTTGGGGTGTTG+TGG | 0.329281 | 5.4:-62542866 | None:intergenic |
TAGCTCTCTGGCAATCATAT+TGG | 0.332927 | 5.4:-62542129 | None:intergenic |
CCATTGTTCAGCAGCTTTAG+TGG | 0.336373 | 5.4:-62541288 | None:intergenic |
TGAGTTTACCTTTACTGTTC+AGG | 0.336514 | 5.4:+62541522 | MS.gene50183:CDS |
TATTGATCCTGAGAATAAAA+TGG | 0.338707 | 5.4:+62542228 | MS.gene50183:CDS |
CCTATACATTGGTTGGGGAT+TGG | 0.339541 | 5.4:+62540521 | MS.gene50183:CDS |
CACTAAAGCTGCTGAACAAT+GGG | 0.342197 | 5.4:+62541289 | MS.gene50183:CDS |
GCTGCTTCCTGAGAGCTTCA+TGG | 0.346516 | 5.4:-62540235 | None:intergenic |
GTTGGTTATAGTTGGATTGA+TGG | 0.352635 | 5.4:+62542677 | MS.gene50183:CDS |
TAATAAATCAACCTTTGCTT+GGG | 0.353094 | 5.4:+62542150 | MS.gene50183:CDS |
GAAGGATCTGATGAAATATT+TGG | 0.353463 | 5.4:+62541936 | MS.gene50183:CDS |
CTCTGAATGGCAACCTCAAC+AGG | 0.354874 | 5.4:-62543425 | None:intergenic |
TGACCTTGCGGCATGTTTCT+TGG | 0.358607 | 5.4:-62542004 | None:intergenic |
ACCTGAAGGATCAAGGTTCT+TGG | 0.360091 | 5.4:-62543303 | None:intergenic |
TCAGCAAGGCTAACTGTTCC+TGG | 0.360471 | 5.4:+62543224 | MS.gene50183:CDS |
CCATAGTTGATCCTGCTTCT+GGG | 0.367703 | 5.4:+62539749 | MS.gene50183:CDS |
CTTATGATCCTCTAGCTTTG+AGG | 0.378272 | 5.4:+62540790 | MS.gene50183:CDS |
TCCAAGAACCTTGATCCTTC+AGG | 0.384997 | 5.4:+62543302 | MS.gene50183:CDS |
TGGTGGAGCCCACTCCAGTC+AGG | 0.386539 | 5.4:-62539691 | None:intergenic |
GTCTGGATTCAGGTTCTGTT+TGG | 0.394150 | 5.4:+62540625 | MS.gene50183:intron |
CTTTGAGAGGTTCTTCCCTC+AGG | 0.394486 | 5.4:+62542911 | MS.gene50183:CDS |
AACTTCCCTATACATTGGTT+GGG | 0.395146 | 5.4:+62540515 | MS.gene50183:CDS |
TTAAATCACTTGGTGTCAAA+TGG | 0.396039 | 5.4:+62541901 | MS.gene50183:CDS |
TGGAGGTTTGGACTCATCAT+TGG | 0.403230 | 5.4:+62541235 | MS.gene50183:CDS |
CTTAGTACCTTTGGCAGGTA+AGG | 0.415335 | 5.4:-62542539 | None:intergenic |
GTGATGGTGTTGGTTATAGT+TGG | 0.421617 | 5.4:+62542669 | MS.gene50183:CDS |
TCTGTAGTAGTATGCTTCCT+TGG | 0.425516 | 5.4:-62542883 | None:intergenic |
CAATCCCCAACCAATGTATA+GGG | 0.426353 | 5.4:-62540520 | None:intergenic |
TGAAGCACCGTGGCCCTGAC+TGG | 0.426940 | 5.4:+62539677 | MS.gene50183:intron |
CCCAGAAGCAGGATCAACTA+TGG | 0.430437 | 5.4:-62539749 | None:intergenic |
TGTTCTACTATCTGGAGGTT+TGG | 0.436246 | 5.4:+62541223 | MS.gene50183:CDS |
AGGTTGATTTATTAGCTCTC+TGG | 0.443552 | 5.4:-62542141 | None:intergenic |
ATAGGGCTCACCTGATCTTA+AGG | 0.455924 | 5.4:+62541459 | MS.gene50183:intron |
CTAATAAATCAACCTTTGCT+TGG | 0.458774 | 5.4:+62542149 | MS.gene50183:CDS |
CAGCAGCTTTAGTGGTTGCT+AGG | 0.459719 | 5.4:-62541280 | None:intergenic |
GGTGTCAAATGGGTGATCTC+TGG | 0.468007 | 5.4:+62541912 | MS.gene50183:CDS |
TGTGGTATACTTGCTGTGCT+TGG | 0.469074 | 5.4:+62538029 | MS.gene50183:CDS |
CATGCAACAGTTGGTCCTCC+AGG | 0.472328 | 5.4:-62543242 | None:intergenic |
TAACTTCCCTATACATTGGT+TGG | 0.473236 | 5.4:+62540514 | MS.gene50183:CDS |
ATTTGAGAAGATTATACCAT+TGG | 0.476016 | 5.4:+62543394 | MS.gene50183:CDS |
ATTGGAAGCTTCTCCTGTTG+AGG | 0.481461 | 5.4:+62543412 | MS.gene50183:CDS |
TTGATGACTGATGTGCCTTT+CGG | 0.482997 | 5.4:+62541200 | MS.gene50183:CDS |
CTCAAAGCTAGAGGATCATA+AGG | 0.487494 | 5.4:-62540789 | None:intergenic |
TAAATCACTTGGTGTCAAAT+GGG | 0.487845 | 5.4:+62541902 | MS.gene50183:CDS |
CTCATTCTGTGTTGGCCTTG+AGG | 0.489628 | 5.4:+62541325 | MS.gene50183:CDS |
CTCTCTGGCAATCATATTGG+TGG | 0.491179 | 5.4:-62542126 | None:intergenic |
GGCTCACCTGATCTTAAGGC+TGG | 0.495494 | 5.4:+62541463 | MS.gene50183:CDS |
AATTACTTAGTACCTTTGGC+AGG | 0.501660 | 5.4:-62542544 | None:intergenic |
CTGATCCTACTAGAGCTAAG+AGG | 0.503237 | 5.4:+62538057 | MS.gene50183:CDS |
TCTAACCACACATTCCGAAC+TGG | 0.503914 | 5.4:+62540260 | MS.gene50183:CDS |
TTTACAACCATGAAGCTCTC+AGG | 0.505927 | 5.4:+62540228 | MS.gene50183:CDS |
CACCGTGGCCCTGACTGGAG+TGG | 0.507750 | 5.4:+62539682 | MS.gene50183:CDS |
ACCGTGGCCCTGACTGGAGT+GGG | 0.511159 | 5.4:+62539683 | MS.gene50183:CDS |
GGAATATGGAGAAGACTTTG+TGG | 0.514584 | 5.4:+62540410 | MS.gene50183:CDS |
CATCACAATCACTTCCAGTT+CGG | 0.516313 | 5.4:-62540274 | None:intergenic |
CATAGTTGATCCTGCTTCTG+GGG | 0.518463 | 5.4:+62539750 | MS.gene50183:CDS |
CACCTATGTTTCTTATGTCA+AGG | 0.519137 | 5.4:+62541874 | MS.gene50183:CDS |
AGAGGTTGATCCCCAGAAGC+AGG | 0.522206 | 5.4:-62539760 | None:intergenic |
TGGTGTTTGGGGTGTTGTGG+GGG | 0.523651 | 5.4:-62542863 | None:intergenic |
CTGCTCTACCTGAAGGATCA+AGG | 0.523757 | 5.4:-62543310 | None:intergenic |
AGAGGATCATAAGGAGCTGA+TGG | 0.524528 | 5.4:-62540780 | None:intergenic |
GATTACAGGCAGTGATAAAG+AGG | 0.524836 | 5.4:+62541177 | MS.gene50183:intron |
GGTGGAGCCCACTCCAGTCA+GGG | 0.525107 | 5.4:-62539690 | None:intergenic |
TACATTGGTTGGGGATTGGA+TGG | 0.526541 | 5.4:+62540525 | MS.gene50183:CDS |
CCACTAAAGCTGCTGAACAA+TGG | 0.526602 | 5.4:+62541288 | MS.gene50183:CDS |
GAAGATGGTACAATCCTCCT+TGG | 0.526713 | 5.4:+62540742 | MS.gene50183:CDS |
ACTCATGGTGAACAGTTTCA+AGG | 0.527064 | 5.4:-62541504 | None:intergenic |
AGCAGTTACCTGAACAGTAA+AGG | 0.527338 | 5.4:-62541530 | None:intergenic |
CATTTGTACTCTAGCAAAGA+TGG | 0.527462 | 5.4:+62540711 | MS.gene50183:CDS |
CACTTCCAGTTCGGAATGTG+TGG | 0.528154 | 5.4:-62540265 | None:intergenic |
CGAACCCTCTTAGCTCTAGT+AGG | 0.529513 | 5.4:-62538062 | None:intergenic |
ACTTCCCTATACATTGGTTG+GGG | 0.533129 | 5.4:+62540516 | MS.gene50183:CDS |
AAACTACACTCATTCTGTGT+TGG | 0.538533 | 5.4:+62541317 | MS.gene50183:CDS |
TTGTGATGTTATTGCACACT+TGG | 0.539309 | 5.4:+62540289 | MS.gene50183:CDS |
GCCCACTCCAGTCAGGGCCA+CGG | 0.540446 | 5.4:-62539684 | None:intergenic |
AAGATGGTGGATTTAGAAGA+TGG | 0.540992 | 5.4:+62540727 | MS.gene50183:CDS |
TTCGGTGTTCTACTATCTGG+AGG | 0.541584 | 5.4:+62541218 | MS.gene50183:CDS |
AAAAGCAGTCACCATGTTGG+TGG | 0.543353 | 5.4:-62539708 | None:intergenic |
CAGCTCAAACTAGCTCTGAA+TGG | 0.544212 | 5.4:-62543438 | None:intergenic |
CTTTCACAAGGCACCAAACA+AGG | 0.545018 | 5.4:+62541971 | MS.gene50183:CDS |
TTGGTGTTTGGGGTGTTGTG+GGG | 0.552196 | 5.4:-62542864 | None:intergenic |
CACAGCAAAAGCTGTTGAGT+GGG | 0.555110 | 5.4:+62543268 | MS.gene50183:CDS |
GCTGTGCTGCATGCAACAGT+TGG | 0.559213 | 5.4:-62543251 | None:intergenic |
AGAAGACTTTGTGGACAAGT+TGG | 0.566916 | 5.4:+62540419 | MS.gene50183:CDS |
GACTTTGTGGACAAGTTGGA+TGG | 0.567732 | 5.4:+62540423 | MS.gene50183:CDS |
TTCCTTGACATAAGAAACAT+AGG | 0.569230 | 5.4:-62541876 | None:intergenic |
AGGATTCTCTTCATCATCAA+AGG | 0.569332 | 5.4:-62542519 | None:intergenic |
TTTGAGGCATGCCTTTGAGA+AGG | 0.570418 | 5.4:+62540806 | MS.gene50183:CDS |
GAACAATTCAGTGATGGTGT+TGG | 0.577943 | 5.4:+62542659 | MS.gene50183:CDS |
GTATGCTTCCTTGGTGTTTG+GGG | 0.580346 | 5.4:-62542874 | None:intergenic |
TATGAATCATACCTTCTCAA+AGG | 0.580405 | 5.4:-62540817 | None:intergenic |
ATAGTGGCTAGAGATGCTAT+AGG | 0.581258 | 5.4:+62540489 | MS.gene50183:CDS |
GGAGTAACTTCCCTATACAT+TGG | 0.585952 | 5.4:+62540510 | MS.gene50183:CDS |
GATAGGATGATGCTTAATGC+TGG | 0.589317 | 5.4:+62542831 | MS.gene50183:CDS |
TGCTAGGTAGCGAGAAGTGA+TGG | 0.589338 | 5.4:-62541264 | None:intergenic |
TGATCCTACTAGAGCTAAGA+GGG | 0.590868 | 5.4:+62538058 | MS.gene50183:CDS |
GGATCTGATGAAATATTTGG+TGG | 0.595741 | 5.4:+62541939 | MS.gene50183:CDS |
GGCTTCTAGACCCCAAGCAA+AGG | 0.595878 | 5.4:-62542161 | None:intergenic |
GCACAGCAAAAGCTGTTGAG+TGG | 0.598571 | 5.4:+62543267 | MS.gene50183:CDS |
GGATGGTATAGATGCAATTG+AGG | 0.599373 | 5.4:+62541800 | MS.gene50183:intron |
TGAGAAGTATATTCTGAGGA+AGG | 0.602559 | 5.4:+62542496 | MS.gene50183:CDS |
CCTTCAGGTAGAGCAGCACT+TGG | 0.604084 | 5.4:+62543317 | MS.gene50183:CDS |
GAACAGTAAAGGTAAACTCA+TGG | 0.604362 | 5.4:-62541519 | None:intergenic |
TCGTGACAACAGTTACATAG+TGG | 0.611665 | 5.4:+62540473 | MS.gene50183:CDS |
ACTACAGAATGATCTTTGAG+AGG | 0.611737 | 5.4:+62542898 | MS.gene50183:CDS |
TCAAGGAAGATTAAATCACT+TGG | 0.611830 | 5.4:+62541891 | MS.gene50183:CDS |
TAAACATATACTACAATGTG+TGG | 0.612941 | 5.4:+62538011 | None:intergenic |
TTATGAAAACCAGAAAACCT+TGG | 0.617746 | 5.4:+62543355 | MS.gene50183:CDS |
CAGAAGGAACAATTCAGTGA+TGG | 0.617988 | 5.4:+62542653 | MS.gene50183:CDS |
TTGTACTCTAGCAAAGATGG+TGG | 0.620516 | 5.4:+62540714 | MS.gene50183:CDS |
CCACAACACCCCAAACACCA+AGG | 0.622582 | 5.4:+62542866 | MS.gene50183:CDS |
TTGCTAGAGTACAAATGACC+AGG | 0.627197 | 5.4:-62540705 | None:intergenic |
CCAAGTGCTGCTCTACCTGA+AGG | 0.631267 | 5.4:-62543317 | None:intergenic |
AATAAATCAACCTTTGCTTG+GGG | 0.634956 | 5.4:+62542151 | MS.gene50183:CDS |
AGAGAATCCTTACCTGCCAA+AGG | 0.637793 | 5.4:+62542532 | MS.gene50183:CDS |
AAGGCATGCCTCAAAGCTAG+AGG | 0.643083 | 5.4:-62540798 | None:intergenic |
ACGAGTATCCAATAGAACAA+AGG | 0.647672 | 5.4:-62540454 | None:intergenic |
TGGATATCTGTACTTTCACA+AGG | 0.651156 | 5.4:+62541959 | MS.gene50183:CDS |
GATCAACTATGGCTAACCGT+TGG | 0.653817 | 5.4:-62539738 | None:intergenic |
AGACAAATCTGTCATTGTCA+CGG | 0.657965 | 5.4:+62539792 | MS.gene50183:CDS |
CAATCCTCCTTGGTACTCTG+AGG | 0.659380 | 5.4:+62540752 | MS.gene50183:CDS |
TCACCAAGAAACATGCCGCA+AGG | 0.661739 | 5.4:+62542001 | MS.gene50183:CDS |
GAATTGAGAAGTATATTCTG+AGG | 0.663370 | 5.4:+62542492 | MS.gene50183:CDS |
CCAGATAGTAGAACACCGAA+AGG | 0.664518 | 5.4:-62541215 | None:intergenic |
AAATGGGTGATCTCTGGTGA+AGG | 0.667269 | 5.4:+62541918 | MS.gene50183:CDS |
CTAGAGTACAAATGACCAGG+TGG | 0.679392 | 5.4:-62540702 | None:intergenic |
TCAACAGGAGAAGCTTCCAA+TGG | 0.679614 | 5.4:-62543410 | None:intergenic |
TAGAGTACAAATGACCAGGT+GGG | 0.692112 | 5.4:-62540701 | None:intergenic |
TGGAGTGGGCTCCACCAACA+TGG | 0.697527 | 5.4:+62539697 | MS.gene50183:CDS |
GGAATAGCCTCAGAGTACCA+AGG | 0.698225 | 5.4:-62540759 | None:intergenic |
TAACATCATATGTTTCAACA+TGG | 0.707488 | 5.4:-62541833 | None:intergenic |
ACTAAAGCTGCTGAACAATG+GGG | 0.720021 | 5.4:+62541290 | MS.gene50183:CDS |
GCAAGGCTAACTGTTCCTGG+AGG | 0.745250 | 5.4:+62543227 | MS.gene50183:CDS |
CGTAACAGATTGAAGCACCG+TGG | 0.776414 | 5.4:+62539667 | MS.gene50183:intron |
ATAGCCTCAGAGTACCAAGG+AGG | 0.789643 | 5.4:-62540756 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATGAAATGATTAATATA+TGG | + | chr5.4:62541763-62541782 | MS.gene50183:intron | 10.0% |
!! | GTAATTTATAAAAAAATATG+TGG | + | chr5.4:62539552-62539571 | MS.gene50183:intron | 10.0% |
!!! | ATAAATTTGTTTTCTTAATA+CGG | + | chr5.4:62538329-62538348 | MS.gene50183:intron | 10.0% |
!!! | ATTTTTTGATAAACTAATAT+TGG | + | chr5.4:62539435-62539454 | MS.gene50183:intron | 10.0% |
!! | AATATAATCATATATGTCAA+TGG | - | chr5.4:62543044-62543063 | None:intergenic | 15.0% |
!! | AATCCATAAATTAAAGTATA+AGG | - | chr5.4:62540571-62540590 | None:intergenic | 15.0% |
!! | TGAAATTAAGAATACTAAAT+AGG | - | chr5.4:62538123-62538142 | None:intergenic | 15.0% |
!! | TTACATAATCATTATTGTTA+TGG | - | chr5.4:62540167-62540186 | None:intergenic | 15.0% |
!! | TTTAGTATATGTCATATAAA+TGG | - | chr5.4:62539822-62539841 | None:intergenic | 15.0% |
!!! | AAGTTTATGTTACTTATAAT+TGG | + | chr5.4:62542782-62542801 | MS.gene50183:intron | 15.0% |
!!! | CTATTTTCTTAAATTATTAC+CGG | + | chr5.4:62543073-62543092 | MS.gene50183:intron | 15.0% |
!!! | TTAATTAGTTTAATTAACCA+TGG | + | chr5.4:62539086-62539105 | MS.gene50183:intron | 15.0% |
!!! | TTACCTTATACTTTAATTTA+TGG | + | chr5.4:62540565-62540584 | MS.gene50183:intron | 15.0% |
!! | AAAACTTTGATAAGATAAGT+GGG | + | chr5.4:62539153-62539172 | MS.gene50183:intron | 20.0% |
!! | AATCTAACCAAAAATTGTTT+CGG | - | chr5.4:62541057-62541076 | None:intergenic | 20.0% |
!! | TAGTTAAAAACTTCAATCAT+TGG | - | chr5.4:62538941-62538960 | None:intergenic | 20.0% |
!! | TTATTGAAAAATCAGGTAAA+TGG | + | chr5.4:62540200-62540219 | MS.gene50183:intron | 20.0% |
!! | TTCATGCAATTATATTCATA+TGG | + | chr5.4:62540045-62540064 | MS.gene50183:intron | 20.0% |
!! | TTGAACAACAAAAGATTAAA+AGG | + | chr5.4:62539311-62539330 | MS.gene50183:intron | 20.0% |
!! | TTTGTTTAATCTAACTTGAT+GGG | - | chr5.4:62539136-62539155 | None:intergenic | 20.0% |
!!! | AAAAACAACTATCATGTTTT+TGG | - | chr5.4:62542303-62542322 | None:intergenic | 20.0% |
!!! | ACTCATCTTATAAAGATTTT+TGG | + | chr5.4:62539477-62539496 | MS.gene50183:intron | 20.0% |
!!! | ACTTTTTTAGCTTACAATTA+GGG | + | chr5.4:62541718-62541737 | MS.gene50183:intron | 20.0% |
!!! | ATTATTGGTAAATTTTGTAG+TGG | + | chr5.4:62539256-62539275 | MS.gene50183:intron | 20.0% |
!!! | ATTTACTTAGCTTTTCATTA+TGG | + | chr5.4:62538571-62538590 | MS.gene50183:intron | 20.0% |
!!! | CATAAATTAATTTTGATGCA+CGG | - | chr5.4:62538309-62538328 | None:intergenic | 20.0% |
!!! | CTATTTTTAATATGCAAAAC+TGG | + | chr5.4:62540076-62540095 | MS.gene50183:intron | 20.0% |
!!! | CTTTGAACTAATAATTTGTT+TGG | + | chr5.4:62540320-62540339 | MS.gene50183:intron | 20.0% |
!!! | TACTTTTTTAGCTTACAATT+AGG | + | chr5.4:62541717-62541736 | MS.gene50183:intron | 20.0% |
!!! | TATATGGTTTTATGTTATGT+AGG | + | chr5.4:62541779-62541798 | MS.gene50183:intron | 20.0% |
!!! | TTATTGGTAAATTTTGTAGT+GGG | + | chr5.4:62539257-62539276 | MS.gene50183:intron | 20.0% |
!!! | TTTTCCCTTTTATTTACAAA+GGG | - | chr5.4:62542379-62542398 | None:intergenic | 20.0% |
!!! | TTTTGTTTAATCTAACTTGA+TGG | - | chr5.4:62539137-62539156 | None:intergenic | 20.0% |
! | AAATGTTTACGCAAAGTAAA+AGG | + | chr5.4:62542416-62542435 | MS.gene50183:intron | 25.0% |
! | AAATTGTAGAGTTAAAAGGT+TGG | - | chr5.4:62542737-62542756 | None:intergenic | 25.0% |
! | AACCATGGTAACTTTATAAT+TGG | + | chr5.4:62539101-62539120 | MS.gene50183:intron | 25.0% |
! | AAGACGACATAATTTAACAA+GGG | + | chr5.4:62543160-62543179 | MS.gene50183:intron | 25.0% |
! | AATGATTTAATCGGTTGAAT+TGG | + | chr5.4:62541617-62541636 | MS.gene50183:intron | 25.0% |
! | AATGTTTACGCAAAGTAAAA+GGG | + | chr5.4:62542417-62542436 | MS.gene50183:intron | 25.0% |
! | ACCATGGTAACTTTATAATT+GGG | + | chr5.4:62539102-62539121 | MS.gene50183:intron | 25.0% |
! | AGATATTAAGACAACATTGA+AGG | - | chr5.4:62541423-62541442 | None:intergenic | 25.0% |
! | ATGATGATTAAGAATAAACG+TGG | + | chr5.4:62538819-62538838 | MS.gene50183:intron | 25.0% |
! | ATGTTAGAACACAATAAAAG+AGG | + | chr5.4:62542045-62542064 | MS.gene50183:intron | 25.0% |
! | ATTCAGACACATTAAACTAA+AGG | - | chr5.4:62539609-62539628 | None:intergenic | 25.0% |
! | ATTTGAGAAGATTATACCAT+TGG | + | chr5.4:62543394-62543413 | MS.gene50183:CDS | 25.0% |
! | CAAAACTTTGATAAGATAAG+TGG | + | chr5.4:62539152-62539171 | MS.gene50183:intron | 25.0% |
! | CATGGTTCAAATGATTTAAT+CGG | + | chr5.4:62541608-62541627 | MS.gene50183:intron | 25.0% |
! | CGAGAAAAGATAAAATGTAT+TGG | + | chr5.4:62541004-62541023 | MS.gene50183:intron | 25.0% |
! | GATTTGTCTTCATTAAAAAG+AGG | - | chr5.4:62539781-62539800 | None:intergenic | 25.0% |
! | GTTTCCAATCAAAACAAAAT+AGG | - | chr5.4:62541125-62541144 | None:intergenic | 25.0% |
! | TAACATCATATGTTTCAACA+TGG | - | chr5.4:62541836-62541855 | None:intergenic | 25.0% |
! | TAAGACGACATAATTTAACA+AGG | + | chr5.4:62543159-62543178 | MS.gene50183:intron | 25.0% |
! | TAAGTGCATGTTTAGATTTA+CGG | + | chr5.4:62540875-62540894 | MS.gene50183:intron | 25.0% |
! | TAATAAATCAACCTTTGCTT+GGG | + | chr5.4:62542150-62542169 | MS.gene50183:CDS | 25.0% |
! | TAGTTTAATGTGTCTGAATA+TGG | + | chr5.4:62539610-62539629 | MS.gene50183:intron | 25.0% |
! | TATTGATCCTGAGAATAAAA+TGG | + | chr5.4:62542228-62542247 | MS.gene50183:CDS | 25.0% |
! | TGATGATTAAGAATAAACGT+GGG | + | chr5.4:62538820-62538839 | MS.gene50183:intron | 25.0% |
! | TGTTAAATTATGTCGTCTTA+TGG | - | chr5.4:62543159-62543178 | None:intergenic | 25.0% |
! | TTCGAATAAGTATTAGCATA+AGG | - | chr5.4:62539369-62539388 | None:intergenic | 25.0% |
!! | AATCATACCATTTTATTCTC+AGG | - | chr5.4:62542238-62542257 | None:intergenic | 25.0% |
!! | ACCAATTTTGCATAAATCAA+TGG | - | chr5.4:62542581-62542600 | None:intergenic | 25.0% |
!! | ACTATCTAAATCTTTTACCA+CGG | + | chr5.4:62538375-62538394 | MS.gene50183:intron | 25.0% |
!! | AGAGTGACTTTTAAATAAAG+TGG | - | chr5.4:62539025-62539044 | None:intergenic | 25.0% |
!! | CATGATTTAAAATGACACAT+TGG | + | chr5.4:62541150-62541169 | MS.gene50183:intron | 25.0% |
!! | CTTTTGTTACAATTGACTAA+CGG | - | chr5.4:62538213-62538232 | None:intergenic | 25.0% |
!! | GTTTGTATTTGAACATGTTT+TGG | + | chr5.4:62540597-62540616 | MS.gene50183:intron | 25.0% |
!! | TATCTTTTCCTTTGTTCTAT+TGG | + | chr5.4:62540446-62540465 | MS.gene50183:CDS | 25.0% |
!! | TCACTGATTGTTTATCAATT+AGG | + | chr5.4:62539196-62539215 | MS.gene50183:intron | 25.0% |
!! | TGTGTCATTATTGAAAAATC+AGG | + | chr5.4:62540193-62540212 | MS.gene50183:intron | 25.0% |
!!! | CATTTTATATGAGTTGAGTT+TGG | - | chr5.4:62539533-62539552 | None:intergenic | 25.0% |
!!! | GTTTTCCCTTTTATTTACAA+AGG | - | chr5.4:62542380-62542399 | None:intergenic | 25.0% |
!!! | TATGCCTATTTTGTTTTGAT+TGG | + | chr5.4:62541118-62541137 | MS.gene50183:intron | 25.0% |
!!! | TCCATTGATTTATGCAAAAT+TGG | + | chr5.4:62542577-62542596 | MS.gene50183:intron | 25.0% |
!!! | TTTCCCTTTTATTTACAAAG+GGG | - | chr5.4:62542378-62542397 | None:intergenic | 25.0% |
!!! | TTTGCTATTCAAATCTAATC+TGG | - | chr5.4:62538422-62538441 | None:intergenic | 25.0% |
AAAATAGGCATAAGTTACCT+TGG | - | chr5.4:62541110-62541129 | None:intergenic | 30.0% | |
AAATGTCTCGGTACATAATT+GGG | + | chr5.4:62540839-62540858 | MS.gene50183:intron | 30.0% | |
AATAAATCAACCTTTGCTTG+GGG | + | chr5.4:62542151-62542170 | MS.gene50183:CDS | 30.0% | |
ACAATGATCTTGTGAATTGA+TGG | + | chr5.4:62538270-62538289 | MS.gene50183:intron | 30.0% | |
ACCCAATTATAAAGTTACCA+TGG | - | chr5.4:62539106-62539125 | None:intergenic | 30.0% | |
AGCAAATTACTTAGTACCTT+TGG | - | chr5.4:62542551-62542570 | None:intergenic | 30.0% | |
ATAAACTCCTTGTCCAAAAA+TGG | - | chr5.4:62542193-62542212 | None:intergenic | 30.0% | |
CAAATATGACGATTGAAACA+AGG | - | chr5.4:62538869-62538888 | None:intergenic | 30.0% | |
CACGAAATTGTAGAGTTAAA+AGG | - | chr5.4:62542741-62542760 | None:intergenic | 30.0% | |
CCAATAATTCCATTTCAAAC+TGG | - | chr5.4:62539244-62539263 | None:intergenic | 30.0% | |
CTAATAAATCAACCTTTGCT+TGG | + | chr5.4:62542149-62542168 | MS.gene50183:CDS | 30.0% | |
GAAGGATCTGATGAAATATT+TGG | + | chr5.4:62541936-62541955 | MS.gene50183:CDS | 30.0% | |
GAATAAATATATGCACCTCA+AGG | - | chr5.4:62541343-62541362 | None:intergenic | 30.0% | |
GGTATGATTCATAAATGTCT+CGG | + | chr5.4:62540827-62540846 | MS.gene50183:intron | 30.0% | |
GTCCAGATAAAAAAAGATGA+AGG | + | chr5.4:62542467-62542486 | MS.gene50183:intron | 30.0% | |
TAAACAATCAGTGATCTGAT+TGG | - | chr5.4:62539190-62539209 | None:intergenic | 30.0% | |
TAAATGTCTCGGTACATAAT+TGG | + | chr5.4:62540838-62540857 | MS.gene50183:intron | 30.0% | |
TATGAATCATACCTTCTCAA+AGG | - | chr5.4:62540820-62540839 | None:intergenic | 30.0% | |
TATGTGTGTTTCATAGGATA+TGG | + | chr5.4:62540016-62540035 | MS.gene50183:intron | 30.0% | |
TCAAGGAAGATTAAATCACT+TGG | + | chr5.4:62541891-62541910 | MS.gene50183:CDS | 30.0% | |
TCATAATTCTAATGACCTTG+CGG | - | chr5.4:62542019-62542038 | None:intergenic | 30.0% | |
TGACCCCTTTGTAAATAAAA+GGG | + | chr5.4:62542372-62542391 | MS.gene50183:intron | 30.0% | |
TGGACTTTCTAATATCAATC+AGG | + | chr5.4:62538591-62538610 | MS.gene50183:intron | 30.0% | |
TGTTAATCTTGATTAGTACG+AGG | + | chr5.4:62540389-62540408 | MS.gene50183:intron | 30.0% | |
TTAACTCTACAATTTCGTGA+TGG | + | chr5.4:62542742-62542761 | MS.gene50183:intron | 30.0% | |
TTAGTGAAAACATTAGTGTC+TGG | + | chr5.4:62540944-62540963 | MS.gene50183:intron | 30.0% | |
TTATGAAAACCAGAAAACCT+TGG | + | chr5.4:62543355-62543374 | MS.gene50183:CDS | 30.0% | |
TTCCTTGACATAAGAAACAT+AGG | - | chr5.4:62541879-62541898 | None:intergenic | 30.0% | |
TTGCCTTCTAATTTCGAATA+GGG | + | chr5.4:62541442-62541461 | MS.gene50183:intron | 30.0% | |
! | ATCAATCGACTCTTCTTAAT+CGG | + | chr5.4:62542941-62542960 | MS.gene50183:intron | 30.0% |
! | CCAGTTTGAAATGGAATTAT+TGG | + | chr5.4:62539241-62539260 | MS.gene50183:intron | 30.0% |
! | CTATCTAAATCTTTTACCAC+GGG | + | chr5.4:62538376-62538395 | MS.gene50183:intron | 30.0% |
! | GAATATGGATTATGTCACTT+GGG | - | chr5.4:62538847-62538866 | None:intergenic | 30.0% |
! | GAATTGAGAAGTATATTCTG+AGG | + | chr5.4:62542492-62542511 | MS.gene50183:CDS | 30.0% |
! | GTTAGATTTTACTTACCTCT+TGG | + | chr5.4:62541069-62541088 | MS.gene50183:intron | 30.0% |
! | TTCGTTCACATTACTCTTTT+TGG | - | chr5.4:62538489-62538508 | None:intergenic | 30.0% |
! | TTTACACATGATGCTTTTGT+CGG | + | chr5.4:62538146-62538165 | MS.gene50183:intron | 30.0% |
! | TTTCTGACCGAAACAATTTT+TGG | + | chr5.4:62541047-62541066 | MS.gene50183:intron | 30.0% |
!! | GGTGTTTCTATTTTGCAAAT+TGG | + | chr5.4:62538684-62538703 | MS.gene50183:intron | 30.0% |
!! | TAAATCACTTGGTGTCAAAT+GGG | + | chr5.4:62541902-62541921 | MS.gene50183:CDS | 30.0% |
!! | TTAAATCACTTGGTGTCAAA+TGG | + | chr5.4:62541901-62541920 | MS.gene50183:CDS | 30.0% |
!! | TTGTGATGATCTTGTCATTT+TGG | + | chr5.4:62538796-62538815 | MS.gene50183:intron | 30.0% |
!!! | GTCCTTCATCTTTTTTTATC+TGG | - | chr5.4:62542472-62542491 | None:intergenic | 30.0% |
!!! | TGGTTTTATGTTATGTAGGA+TGG | + | chr5.4:62541783-62541802 | MS.gene50183:intron | 30.0% |
AAACTACACTCATTCTGTGT+TGG | + | chr5.4:62541317-62541336 | MS.gene50183:CDS | 35.0% | |
AACAAATTCCTTGTTGAGAG+TGG | + | chr5.4:62538730-62538749 | MS.gene50183:intron | 35.0% | |
AATTACTTAGTACCTTTGGC+AGG | - | chr5.4:62542547-62542566 | None:intergenic | 35.0% | |
ACGAGTATCCAATAGAACAA+AGG | - | chr5.4:62540457-62540476 | None:intergenic | 35.0% | |
ACTACAGAATGATCTTTGAG+AGG | + | chr5.4:62542898-62542917 | MS.gene50183:CDS | 35.0% | |
AGACAAATCTGTCATTGTCA+CGG | + | chr5.4:62539792-62539811 | MS.gene50183:CDS | 35.0% | |
AGGATTCTCTTCATCATCAA+AGG | - | chr5.4:62542522-62542541 | None:intergenic | 35.0% | |
CAATGCTGTAGCATATATTG+CGG | - | chr5.4:62539504-62539523 | None:intergenic | 35.0% | |
CACCTATGTTTCTTATGTCA+AGG | + | chr5.4:62541874-62541893 | MS.gene50183:CDS | 35.0% | |
CATGTCTATGTGTGTTTCAT+AGG | + | chr5.4:62540010-62540029 | MS.gene50183:intron | 35.0% | |
CATTTGTACTCTAGCAAAGA+TGG | + | chr5.4:62540711-62540730 | MS.gene50183:CDS | 35.0% | |
CTTGATTAGTACGAGGAATA+TGG | + | chr5.4:62540396-62540415 | MS.gene50183:intron | 35.0% | |
CTTGCCTTCTAATTTCGAAT+AGG | + | chr5.4:62541441-62541460 | MS.gene50183:intron | 35.0% | |
GAACAGTAAAGGTAAACTCA+TGG | - | chr5.4:62541522-62541541 | None:intergenic | 35.0% | |
GACGATTGAAACAAGGAATA+TGG | - | chr5.4:62538862-62538881 | None:intergenic | 35.0% | |
GGATCTGATGAAATATTTGG+TGG | + | chr5.4:62541939-62541958 | MS.gene50183:CDS | 35.0% | |
GTGACCCCTTTGTAAATAAA+AGG | + | chr5.4:62542371-62542390 | MS.gene50183:intron | 35.0% | |
GTTGGTTATAGTTGGATTGA+TGG | + | chr5.4:62542677-62542696 | MS.gene50183:CDS | 35.0% | |
TAACTTCCCTATACATTGGT+TGG | + | chr5.4:62540514-62540533 | MS.gene50183:CDS | 35.0% | |
TAGAAACACCCAAAAAGTCA+CGG | - | chr5.4:62538674-62538693 | None:intergenic | 35.0% | |
TATCAATTAGGACCAACAAG+TGG | + | chr5.4:62539208-62539227 | MS.gene50183:intron | 35.0% | |
TGAGTTTACCTTTACTGTTC+AGG | + | chr5.4:62541522-62541541 | MS.gene50183:CDS | 35.0% | |
TGATATTGACACGTAAACAC+CGG | - | chr5.4:62543095-62543114 | None:intergenic | 35.0% | |
TGGATATCTGTACTTTCACA+AGG | + | chr5.4:62541959-62541978 | MS.gene50183:CDS | 35.0% | |
TGTCAATATCAGGTCGTATT+TGG | + | chr5.4:62543104-62543123 | MS.gene50183:intron | 35.0% | |
TTGCTCCTTTGAATTGTTCA+TGG | - | chr5.4:62539285-62539304 | None:intergenic | 35.0% | |
TTGTGATGTTATTGCACACT+TGG | + | chr5.4:62540289-62540308 | MS.gene50183:CDS | 35.0% | |
! | AACTTCCCTATACATTGGTT+GGG | + | chr5.4:62540515-62540534 | MS.gene50183:CDS | 35.0% |
! | AGGTTGATTTATTAGCTCTC+TGG | - | chr5.4:62542144-62542163 | None:intergenic | 35.0% |
! | ATATCCAACCGTGACTTTTT+GGG | + | chr5.4:62538663-62538682 | MS.gene50183:intron | 35.0% |
! | ATGGCAATACTCTCTTTTAC+AGG | + | chr5.4:62538772-62538791 | MS.gene50183:intron | 35.0% |
! | CTTCAGGTTAAAGGTGTATA+TGG | + | chr5.4:62542995-62543014 | MS.gene50183:intron | 35.0% |
! | GGAATATGGATTATGTCACT+TGG | - | chr5.4:62538848-62538867 | None:intergenic | 35.0% |
! | TACCTTGGTAATCCAAAGTT+CGG | - | chr5.4:62541095-62541114 | None:intergenic | 35.0% |
! | TATATCCAACCGTGACTTTT+TGG | + | chr5.4:62538662-62538681 | MS.gene50183:intron | 35.0% |
! | TCATGCAGCACATTTTATAC+AGG | + | chr5.4:62542630-62542649 | MS.gene50183:intron | 35.0% |
! | TGAGAAGTATATTCTGAGGA+AGG | + | chr5.4:62542496-62542515 | MS.gene50183:CDS | 35.0% |
! | TGGCAATACTCTCTTTTACA+GGG | + | chr5.4:62538773-62538792 | MS.gene50183:intron | 35.0% |
! | TGTTTTCAGAACCAAACTGT+CGG | - | chr5.4:62541684-62541703 | None:intergenic | 35.0% |
! | TTAATCTAACTTGATGGGCA+TGG | - | chr5.4:62539131-62539150 | None:intergenic | 35.0% |
! | TTATCTTTTCTCGTCAAACG+AGG | - | chr5.4:62540997-62541016 | None:intergenic | 35.0% |
! | TTTTGTTGACCAAGGTTTTC+TGG | - | chr5.4:62543367-62543386 | None:intergenic | 35.0% |
!! | AAGATGGTGGATTTAGAAGA+TGG | + | chr5.4:62540727-62540746 | MS.gene50183:CDS | 35.0% |
!!! | AACATGTTTTGGAATGTGTC+TGG | + | chr5.4:62540608-62540627 | MS.gene50183:intron | 35.0% |
!!! | AGGGGTCACTTGTTTTAAAT+CGG | - | chr5.4:62542360-62542379 | None:intergenic | 35.0% |
!!! | TTCTACAGTTTTGTTGACCA+AGG | - | chr5.4:62543375-62543394 | None:intergenic | 35.0% |
AAATCTGTCATTGTCACGGT+AGG | + | chr5.4:62539796-62539815 | MS.gene50183:intron | 40.0% | |
ACTAAAGCTGCTGAACAATG+GGG | + | chr5.4:62541290-62541309 | MS.gene50183:CDS | 40.0% | |
ACTCATGGTGAACAGTTTCA+AGG | - | chr5.4:62541507-62541526 | None:intergenic | 40.0% | |
AGAAGACTTTGTGGACAAGT+TGG | + | chr5.4:62540419-62540438 | MS.gene50183:CDS | 40.0% | |
AGCAGTTACCTGAACAGTAA+AGG | - | chr5.4:62541533-62541552 | None:intergenic | 40.0% | |
ATAGTGGCTAGAGATGCTAT+AGG | + | chr5.4:62540489-62540508 | MS.gene50183:CDS | 40.0% | |
ATCAAACCGATGAAACCTCT+AGG | + | chr5.4:62541584-62541603 | MS.gene50183:intron | 40.0% | |
CAATCCCCAACCAATGTATA+GGG | - | chr5.4:62540523-62540542 | None:intergenic | 40.0% | |
CACTAAAGCTGCTGAACAAT+GGG | + | chr5.4:62541289-62541308 | MS.gene50183:CDS | 40.0% | |
CAGAAGGAACAATTCAGTGA+TGG | + | chr5.4:62542653-62542672 | MS.gene50183:CDS | 40.0% | |
CATCACAATCACTTCCAGTT+CGG | - | chr5.4:62540277-62540296 | None:intergenic | 40.0% | |
CTCAAAGCTAGAGGATCATA+AGG | - | chr5.4:62540792-62540811 | None:intergenic | 40.0% | |
CTTGTCCAAAAATGGAACTC+TGG | - | chr5.4:62542185-62542204 | None:intergenic | 40.0% | |
GAGCCCTATTCGAAATTAGA+AGG | - | chr5.4:62541448-62541467 | None:intergenic | 40.0% | |
GATAGGATGATGCTTAATGC+TGG | + | chr5.4:62542831-62542850 | MS.gene50183:CDS | 40.0% | |
GATTACAGGCAGTGATAAAG+AGG | + | chr5.4:62541177-62541196 | MS.gene50183:intron | 40.0% | |
GCAGTGCTACAAAGCTTATA+TGG | - | chr5.4:62542973-62542992 | None:intergenic | 40.0% | |
GGAATATGGAGAAGACTTTG+TGG | + | chr5.4:62540410-62540429 | MS.gene50183:CDS | 40.0% | |
GGAGTAACTTCCCTATACAT+TGG | + | chr5.4:62540510-62540529 | MS.gene50183:CDS | 40.0% | |
GGATGGTATAGATGCAATTG+AGG | + | chr5.4:62541800-62541819 | MS.gene50183:intron | 40.0% | |
GGGAACCATGAACAATTCAA+AGG | + | chr5.4:62539277-62539296 | MS.gene50183:intron | 40.0% | |
GGTGTTTACGTGTCAATATC+AGG | + | chr5.4:62543094-62543113 | MS.gene50183:intron | 40.0% | |
TAGAGTACAAATGACCAGGT+GGG | - | chr5.4:62540704-62540723 | None:intergenic | 40.0% | |
TAGCTCTCTGGCAATCATAT+TGG | - | chr5.4:62542132-62542151 | None:intergenic | 40.0% | |
TCATTTGAACCATGACCTAG+AGG | - | chr5.4:62541602-62541621 | None:intergenic | 40.0% | |
TCGTGACAACAGTTACATAG+TGG | + | chr5.4:62540473-62540492 | MS.gene50183:CDS | 40.0% | |
TCTGTAGTAGTATGCTTCCT+TGG | - | chr5.4:62542886-62542905 | None:intergenic | 40.0% | |
TGATCCTACTAGAGCTAAGA+GGG | + | chr5.4:62538058-62538077 | MS.gene50183:CDS | 40.0% | |
TGGTGAAACTCTTCCTTGTT+TGG | - | chr5.4:62541987-62542006 | None:intergenic | 40.0% | |
TGTTCTACTATCTGGAGGTT+TGG | + | chr5.4:62541223-62541242 | MS.gene50183:CDS | 40.0% | |
TTGCTAGAGTACAAATGACC+AGG | - | chr5.4:62540708-62540727 | None:intergenic | 40.0% | |
TTGTACTCTAGCAAAGATGG+TGG | + | chr5.4:62540714-62540733 | MS.gene50183:CDS | 40.0% | |
TTTACAACCATGAAGCTCTC+AGG | + | chr5.4:62540228-62540247 | MS.gene50183:CDS | 40.0% | |
! | AAACTGTCGGTTGGTTCAAT+CGG | - | chr5.4:62541671-62541690 | None:intergenic | 40.0% |
! | ACTTCCCTATACATTGGTTG+GGG | + | chr5.4:62540516-62540535 | MS.gene50183:CDS | 40.0% |
! | AGAAGCCAGAGTTCCATTTT+TGG | + | chr5.4:62542177-62542196 | MS.gene50183:CDS | 40.0% |
! | GAACAATTCAGTGATGGTGT+TGG | + | chr5.4:62542659-62542678 | MS.gene50183:CDS | 40.0% |
! | GACACATTGGTTGTGATTAC+AGG | + | chr5.4:62541163-62541182 | MS.gene50183:intron | 40.0% |
! | GCACATTTTATACAGGCAGA+AGG | + | chr5.4:62542637-62542656 | MS.gene50183:intron | 40.0% |
! | GGTTCTTCACATTTTCCACT+AGG | + | chr5.4:62542803-62542822 | MS.gene50183:intron | 40.0% |
! | GTTTTGCAGCATGAGCTTTA+AGG | - | chr5.4:62542703-62542722 | None:intergenic | 40.0% |
! | TCTTTTCCAGCCTTAAGATC+AGG | - | chr5.4:62541472-62541491 | None:intergenic | 40.0% |
! | TTGATGACTGATGTGCCTTT+CGG | + | chr5.4:62541200-62541219 | MS.gene50183:CDS | 40.0% |
! | TTTGGAATGTGTCTGGATTC+AGG | + | chr5.4:62540615-62540634 | MS.gene50183:intron | 40.0% |
! | TTTTCCACTAGGTGACTGAT+AGG | + | chr5.4:62542814-62542833 | MS.gene50183:intron | 40.0% |
!! | AGTATGCTTCCTTGGTGTTT+GGG | - | chr5.4:62542878-62542897 | None:intergenic | 40.0% |
!! | CAGAGTTCCATTTTTGGACA+AGG | + | chr5.4:62542183-62542202 | MS.gene50183:CDS | 40.0% |
!! | CGATTGATTAACTTGCCTGA+GGG | - | chr5.4:62542929-62542948 | None:intergenic | 40.0% |
!! | CTGTTTTGGATAGCAAGACA+TGG | + | chr5.4:62538753-62538772 | MS.gene50183:intron | 40.0% |
!! | CTTATGATCCTCTAGCTTTG+AGG | + | chr5.4:62540790-62540809 | MS.gene50183:CDS | 40.0% |
!! | GTGATGGTGTTGGTTATAGT+TGG | + | chr5.4:62542669-62542688 | MS.gene50183:CDS | 40.0% |
!! | TAAAAGGGCACTAACTAAGC+TGG | + | chr5.4:62542432-62542451 | MS.gene50183:intron | 40.0% |
!! | TAGTATGCTTCCTTGGTGTT+TGG | - | chr5.4:62542879-62542898 | None:intergenic | 40.0% |
!! | TCGATTGATTAACTTGCCTG+AGG | - | chr5.4:62542930-62542949 | None:intergenic | 40.0% |
!! | TTGTTTTGCAGAACTCAGCA+AGG | + | chr5.4:62543210-62543229 | MS.gene50183:intron | 40.0% |
AAAAGCAGTCACCATGTTGG+TGG | - | chr5.4:62539711-62539730 | None:intergenic | 45.0% | |
AAATGGGTGATCTCTGGTGA+AGG | + | chr5.4:62541918-62541937 | MS.gene50183:CDS | 45.0% | |
AACACCCAAAAAGTCACGGT+TGG | - | chr5.4:62538670-62538689 | None:intergenic | 45.0% | |
ACCTGAAGGATCAAGGTTCT+TGG | - | chr5.4:62543306-62543325 | None:intergenic | 45.0% | |
AGAGAATCCTTACCTGCCAA+AGG | + | chr5.4:62542532-62542551 | MS.gene50183:CDS | 45.0% | |
AGAGGATCATAAGGAGCTGA+TGG | - | chr5.4:62540783-62540802 | None:intergenic | 45.0% | |
AGGACCAACAAGTGGTATGT+GGG | + | chr5.4:62539216-62539235 | MS.gene50183:intron | 45.0% | |
ATAGGGCTCACCTGATCTTA+AGG | + | chr5.4:62541459-62541478 | MS.gene50183:intron | 45.0% | |
ATATGGTGTTTGACGCGTGA+CGG | + | chr5.4:62543012-62543031 | MS.gene50183:intron | 45.0% | |
ATGTGGGGTCCAGTTTGAAA+TGG | + | chr5.4:62539232-62539251 | MS.gene50183:intron | 45.0% | |
ATTGGAAGCTTCTCCTGTTG+AGG | + | chr5.4:62543412-62543431 | MS.gene50183:CDS | 45.0% | |
CAAAACAGCCACTCTCAACA+AGG | - | chr5.4:62538741-62538760 | None:intergenic | 45.0% | |
CACAGCAAAAGCTGTTGAGT+GGG | + | chr5.4:62543268-62543287 | MS.gene50183:CDS | 45.0% | |
CATAGTTGATCCTGCTTCTG+GGG | + | chr5.4:62539750-62539769 | MS.gene50183:CDS | 45.0% | |
CCAAAAAGCAGTCACCATGT+TGG | - | chr5.4:62539714-62539733 | None:intergenic | 45.0% | |
CCAATCCCCAACCAATGTAT+AGG | - | chr5.4:62540524-62540543 | None:intergenic | 45.0% | |
CCACTAAAGCTGCTGAACAA+TGG | + | chr5.4:62541288-62541307 | MS.gene50183:CDS | 45.0% | |
CCAGATAGTAGAACACCGAA+AGG | - | chr5.4:62541218-62541237 | None:intergenic | 45.0% | |
CCATAGTTGATCCTGCTTCT+GGG | + | chr5.4:62539749-62539768 | MS.gene50183:CDS | 45.0% | |
CCATGACCTAGAGGTTTCAT+CGG | - | chr5.4:62541593-62541612 | None:intergenic | 45.0% | |
CTAGAGTACAAATGACCAGG+TGG | - | chr5.4:62540705-62540724 | None:intergenic | 45.0% | |
CTCTCTGGCAATCATATTGG+TGG | - | chr5.4:62542129-62542148 | None:intergenic | 45.0% | |
CTGATCCTACTAGAGCTAAG+AGG | + | chr5.4:62538057-62538076 | MS.gene50183:CDS | 45.0% | |
CTGGTCGAAGCCACTATAAT+TGG | - | chr5.4:62538403-62538422 | None:intergenic | 45.0% | |
CTTAGTACCTTTGGCAGGTA+AGG | - | chr5.4:62542542-62542561 | None:intergenic | 45.0% | |
GAAGATGGTACAATCCTCCT+TGG | + | chr5.4:62540742-62540761 | MS.gene50183:CDS | 45.0% | |
GATCAACTATGGCTAACCGT+TGG | - | chr5.4:62539741-62539760 | None:intergenic | 45.0% | |
GATTGAACCAACCGACAGTT+TGG | + | chr5.4:62541670-62541689 | MS.gene50183:intron | 45.0% | |
TAATCCAAAGTTCGGCCAAG+AGG | - | chr5.4:62541087-62541106 | None:intergenic | 45.0% | |
TACCACGGGACCAATTATAG+TGG | + | chr5.4:62538390-62538409 | MS.gene50183:intron | 45.0% | |
TAGGACCAACAAGTGGTATG+TGG | + | chr5.4:62539215-62539234 | MS.gene50183:intron | 45.0% | |
TCAACAGGAGAAGCTTCCAA+TGG | - | chr5.4:62543413-62543432 | None:intergenic | 45.0% | |
TCATCCTATCAGTCACCTAG+TGG | - | chr5.4:62542821-62542840 | None:intergenic | 45.0% | |
TCCAAGAACCTTGATCCTTC+AGG | + | chr5.4:62543302-62543321 | MS.gene50183:CDS | 45.0% | |
TCTAACCACACATTCCGAAC+TGG | + | chr5.4:62540260-62540279 | MS.gene50183:CDS | 45.0% | |
TGGAGGTTTGGACTCATCAT+TGG | + | chr5.4:62541235-62541254 | MS.gene50183:CDS | 45.0% | |
TTCAGAACCAAACTGTCGGT+TGG | - | chr5.4:62541680-62541699 | None:intergenic | 45.0% | |
! | CCATTGTTCAGCAGCTTTAG+TGG | - | chr5.4:62541291-62541310 | None:intergenic | 45.0% |
! | CCTATACATTGGTTGGGGAT+TGG | + | chr5.4:62540521-62540540 | MS.gene50183:CDS | 45.0% |
! | CTTGTTGAGAGTGGCTGTTT+TGG | + | chr5.4:62538739-62538758 | MS.gene50183:intron | 45.0% |
! | CTTTCACAAGGCACCAAACA+AGG | + | chr5.4:62541971-62541990 | MS.gene50183:CDS | 45.0% |
! | CTTTGTAGCACTGCTACTTC+AGG | + | chr5.4:62542979-62542998 | MS.gene50183:intron | 45.0% |
! | GACTTTGTGGACAAGTTGGA+TGG | + | chr5.4:62540423-62540442 | MS.gene50183:CDS | 45.0% |
! | GCACTGCTACTTCAGGTTAA+AGG | + | chr5.4:62542986-62543005 | MS.gene50183:intron | 45.0% |
! | GTCTGGATTCAGGTTCTGTT+TGG | + | chr5.4:62540625-62540644 | MS.gene50183:intron | 45.0% |
! | TACATTGGTTGGGGATTGGA+TGG | + | chr5.4:62540525-62540544 | MS.gene50183:CDS | 45.0% |
! | TTTGAGGCATGCCTTTGAGA+AGG | + | chr5.4:62540806-62540825 | MS.gene50183:CDS | 45.0% |
!! | CATTTTGAGTGTTTCCCACC+TGG | + | chr5.4:62540687-62540706 | MS.gene50183:CDS | 45.0% |
!! | CCAACATGGTGACTGCTTTT+TGG | + | chr5.4:62539711-62539730 | MS.gene50183:CDS | 45.0% |
!! | CCTTTCGGTGTTCTACTATC+TGG | + | chr5.4:62541215-62541234 | MS.gene50183:CDS | 45.0% |
!! | GTATGCTTCCTTGGTGTTTG+GGG | - | chr5.4:62542877-62542896 | None:intergenic | 45.0% |
!! | TGTGGTATACTTGCTGTGCT+TGG | + | chr5.4:62538029-62538048 | MS.gene50183:CDS | 45.0% |
!! | TTCGGTGTTCTACTATCTGG+AGG | + | chr5.4:62541218-62541237 | MS.gene50183:CDS | 45.0% |
!!! | ACTGCTTTTTGGCACACCAA+CGG | + | chr5.4:62539722-62539741 | MS.gene50183:CDS | 45.0% |
!! | ATTAAATATATTAGATAATA+TGG | + | chr5.4:62538632-62538651 | MS.gene50183:intron | 5.0% |
AAGGCATGCCTCAAAGCTAG+AGG | - | chr5.4:62540801-62540820 | None:intergenic | 50.0% | |
AGCCACTATAATTGGTCCCG+TGG | - | chr5.4:62538395-62538414 | None:intergenic | 50.0% | |
ATTGCCTGCGTGAAAGCTCA+AGG | - | chr5.4:62538091-62538110 | None:intergenic | 50.0% | |
CAATCCTCCTTGGTACTCTG+AGG | + | chr5.4:62540752-62540771 | MS.gene50183:CDS | 50.0% | |
CACTTCCAGTTCGGAATGTG+TGG | - | chr5.4:62540268-62540287 | None:intergenic | 50.0% | |
CCCAGAAGCAGGATCAACTA+TGG | - | chr5.4:62539752-62539771 | None:intergenic | 50.0% | |
CCGATGAAACCTCTAGGTCA+TGG | + | chr5.4:62541590-62541609 | MS.gene50183:intron | 50.0% | |
CTCTGAATGGCAACCTCAAC+AGG | - | chr5.4:62543428-62543447 | None:intergenic | 50.0% | |
CTGCTCTACCTGAAGGATCA+AGG | - | chr5.4:62543313-62543332 | None:intergenic | 50.0% | |
CTGTTGAGTGGGATGCTTCT+TGG | + | chr5.4:62543279-62543298 | MS.gene50183:CDS | 50.0% | |
CTTACCTCTTGGCCGAACTT+TGG | + | chr5.4:62541080-62541099 | MS.gene50183:intron | 50.0% | |
GCACAGCAAAAGCTGTTGAG+TGG | + | chr5.4:62543267-62543286 | MS.gene50183:CDS | 50.0% | |
GCCATAGTTGATCCTGCTTC+TGG | + | chr5.4:62539748-62539767 | MS.gene50183:CDS | 50.0% | |
GGACCAACAAGTGGTATGTG+GGG | + | chr5.4:62539217-62539236 | MS.gene50183:intron | 50.0% | |
GGCCGAACTTTGGATTACCA+AGG | + | chr5.4:62541090-62541109 | MS.gene50183:intron | 50.0% | |
GGTGTCAAATGGGTGATCTC+TGG | + | chr5.4:62541912-62541931 | MS.gene50183:CDS | 50.0% | |
TCACCAAGAAACATGCCGCA+AGG | + | chr5.4:62542001-62542020 | MS.gene50183:CDS | 50.0% | |
TCAGCAAGGCTAACTGTTCC+TGG | + | chr5.4:62543224-62543243 | MS.gene50183:CDS | 50.0% | |
TGACCTTGCGGCATGTTTCT+TGG | - | chr5.4:62542007-62542026 | None:intergenic | 50.0% | |
TGAGGTTGCCATTCAGAGCT+AGG | + | chr5.4:62543430-62543449 | MS.gene50183:CDS | 50.0% | |
TGCTAGGTAGCGAGAAGTGA+TGG | - | chr5.4:62541267-62541286 | None:intergenic | 50.0% | |
! | ATAGCCTCAGAGTACCAAGG+AGG | - | chr5.4:62540759-62540778 | None:intergenic | 50.0% |
! | CAGCAGCTTTAGTGGTTGCT+AGG | - | chr5.4:62541283-62541302 | None:intergenic | 50.0% |
! | CTTTGAGAGGTTCTTCCCTC+AGG | + | chr5.4:62542911-62542930 | MS.gene50183:CDS | 50.0% |
! | GGAATAGCCTCAGAGTACCA+AGG | - | chr5.4:62540762-62540781 | None:intergenic | 50.0% |
!! | CGAACCCTCTTAGCTCTAGT+AGG | - | chr5.4:62538065-62538084 | None:intergenic | 50.0% |
!! | CGTAACAGATTGAAGCACCG+TGG | + | chr5.4:62539667-62539686 | MS.gene50183:intron | 50.0% |
!! | CTCATTCTGTGTTGGCCTTG+AGG | + | chr5.4:62541325-62541344 | MS.gene50183:CDS | 50.0% |
!! | CTTGGTGTTTGGGGTGTTGT+GGG | - | chr5.4:62542868-62542887 | None:intergenic | 50.0% |
!! | TTGGTGTTTGGGGTGTTGTG+GGG | - | chr5.4:62542867-62542886 | None:intergenic | 50.0% |
CATGCAACAGTTGGTCCTCC+AGG | - | chr5.4:62543245-62543264 | None:intergenic | 55.0% | |
CCACAACACCCCAAACACCA+AGG | + | chr5.4:62542866-62542885 | MS.gene50183:CDS | 55.0% | |
CCTTCAGGTAGAGCAGCACT+TGG | + | chr5.4:62543317-62543336 | MS.gene50183:CDS | 55.0% | |
GCAAGGCTAACTGTTCCTGG+AGG | + | chr5.4:62543227-62543246 | MS.gene50183:CDS | 55.0% | |
GCTGCTTCCTGAGAGCTTCA+TGG | - | chr5.4:62540238-62540257 | None:intergenic | 55.0% | |
GCTGTGCTGCATGCAACAGT+TGG | - | chr5.4:62543254-62543273 | None:intergenic | 55.0% | |
GGACCCCACATACCACTTGT+TGG | - | chr5.4:62539223-62539242 | None:intergenic | 55.0% | |
GGCTCACCTGATCTTAAGGC+TGG | + | chr5.4:62541463-62541482 | MS.gene50183:CDS | 55.0% | |
GGCTTCTAGACCCCAAGCAA+AGG | - | chr5.4:62542164-62542183 | None:intergenic | 55.0% | |
GTGTCCTTGAGCTTTCACGC+AGG | + | chr5.4:62538084-62538103 | MS.gene50183:intron | 55.0% | |
TGTTTGACGCGTGACGGTGT+TGG | + | chr5.4:62543018-62543037 | MS.gene50183:intron | 55.0% | |
! | AGAGGTTGATCCCCAGAAGC+AGG | - | chr5.4:62539763-62539782 | None:intergenic | 55.0% |
! | CCAAGTGCTGCTCTACCTGA+AGG | - | chr5.4:62543320-62543339 | None:intergenic | 55.0% |
!! | CCTTGGTGTTTGGGGTGTTG+TGG | - | chr5.4:62542869-62542888 | None:intergenic | 55.0% |
!! | TGGTGTTTGGGGTGTTGTGG+GGG | - | chr5.4:62542866-62542885 | None:intergenic | 55.0% |
! | TGGAGTGGGCTCCACCAACA+TGG | + | chr5.4:62539697-62539716 | MS.gene50183:CDS | 60.0% |
ACCGTGGCCCTGACTGGAGT+GGG | + | chr5.4:62539683-62539702 | MS.gene50183:CDS | 65.0% | |
GGTGGAGCCCACTCCAGTCA+GGG | - | chr5.4:62539693-62539712 | None:intergenic | 65.0% | |
TGGTGGAGCCCACTCCAGTC+AGG | - | chr5.4:62539694-62539713 | None:intergenic | 65.0% | |
!! | TGAAGCACCGTGGCCCTGAC+TGG | + | chr5.4:62539677-62539696 | MS.gene50183:intron | 65.0% |
CACCGTGGCCCTGACTGGAG+TGG | + | chr5.4:62539682-62539701 | MS.gene50183:CDS | 70.0% | |
GCCCACTCCAGTCAGGGCCA+CGG | - | chr5.4:62539687-62539706 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 62538026 | 62543451 | 62538026 | ID=MS.gene50183 |
chr5.4 | mRNA | 62538026 | 62543451 | 62538026 | ID=MS.gene50183.t1;Parent=MS.gene50183 |
chr5.4 | exon | 62538026 | 62538079 | 62538026 | ID=MS.gene50183.t1.exon1;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62538026 | 62538079 | 62538026 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62539682 | 62539813 | 62539682 | ID=MS.gene50183.t1.exon2;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62539682 | 62539813 | 62539682 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62540215 | 62540310 | 62540215 | ID=MS.gene50183.t1.exon3;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62540215 | 62540310 | 62540215 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62540405 | 62540546 | 62540405 | ID=MS.gene50183.t1.exon4;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62540405 | 62540546 | 62540405 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62540637 | 62540827 | 62540637 | ID=MS.gene50183.t1.exon5;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62540637 | 62540827 | 62540637 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62541185 | 62541346 | 62541185 | ID=MS.gene50183.t1.exon6;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62541185 | 62541346 | 62541185 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62541463 | 62541543 | 62541463 | ID=MS.gene50183.t1.exon7;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62541463 | 62541543 | 62541463 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62541801 | 62542022 | 62541801 | ID=MS.gene50183.t1.exon8;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62541801 | 62542022 | 62541801 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62542115 | 62542249 | 62542115 | ID=MS.gene50183.t1.exon9;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62542115 | 62542249 | 62542115 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62542473 | 62542553 | 62542473 | ID=MS.gene50183.t1.exon10;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62542473 | 62542553 | 62542473 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62542638 | 62542724 | 62542638 | ID=MS.gene50183.t1.exon11;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62542638 | 62542724 | 62542638 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62542825 | 62542932 | 62542825 | ID=MS.gene50183.t1.exon12;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62542825 | 62542932 | 62542825 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
chr5.4 | exon | 62543221 | 62543451 | 62543221 | ID=MS.gene50183.t1.exon13;Parent=MS.gene50183.t1 |
chr5.4 | CDS | 62543221 | 62543451 | 62543221 | ID=cds.MS.gene50183.t1;Parent=MS.gene50183.t1 |
Gene Sequence |
Protein sequence |