Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51041.t1 | XP_003608984.1 | 90.3 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 1.50E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51041.t1 | G7JPV2 | 90.3 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 1.1e-98 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050945 | MS.gene51041 | -0.802822 | 4.67E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene51041 | -0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene51041 | -0.832696 | 8.16E-56 | -1.69E-46 |
| MS.gene057684 | MS.gene51041 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene51041 | 0.839199 | 1.83E-57 | -1.69E-46 |
| MS.gene060525 | MS.gene51041 | -0.816841 | 4.49E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51041 | MS.gene001161 | PPI |
| MS.gene51041 | MS.gene51072 | PPI |
| MS.gene51041 | MS.gene51038 | PPI |
| MS.gene51041 | MS.gene033167 | PPI |
| MS.gene51071 | MS.gene51041 | PPI |
| MS.gene51041 | MS.gene51040 | PPI |
| MS.gene51041 | MS.gene51071 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51041.t1 | MTR_4g107630 | 90.278 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 1.65e-136 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51041.t1 | AT5G62720 | 56.250 | 176 | 74 | 2 | 42 | 215 | 58 | 232 | 3.14e-67 | 207 |
| MS.gene51041.t1 | AT3G47980 | 62.577 | 163 | 61 | 0 | 51 | 213 | 77 | 239 | 1.38e-65 | 203 |
| MS.gene51041.t1 | AT5G62720 | 55.072 | 138 | 59 | 2 | 42 | 177 | 58 | 194 | 1.74e-46 | 152 |
Find 61 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCAACAGTTGAGTTTC+TGG | 0.125934 | 8.2:-18015755 | MS.gene51041:CDS |
| CGGTGGTAGTACCAAATTTA+TGG | 0.147539 | 8.2:-18017254 | MS.gene51041:CDS |
| GCAGAAGTACAGTATGTTTA+TGG | 0.153489 | 8.2:-18016038 | MS.gene51041:intron |
| ATGTCTTCTGTAATTGTTTC+CGG | 0.215984 | 8.2:-18017274 | MS.gene51041:CDS |
| GGAATGAGTGGAAGAGGATT+TGG | 0.281069 | 8.2:+18017075 | None:intergenic |
| ATTTGCAGCAATGGCCATAT+TGG | 0.282337 | 8.2:-18016467 | MS.gene51041:CDS |
| TTGTGCAGCCATTGGTGTTT+TGG | 0.288656 | 8.2:-18016005 | MS.gene51041:CDS |
| CTGATCCATCTTTCCCAATA+TGG | 0.299857 | 8.2:+18016453 | None:intergenic |
| ACGTGGCCTCACCCTCCATC+TGG | 0.304995 | 8.2:-18017114 | MS.gene51041:CDS |
| TGACAACGGTACCATAAATT+TGG | 0.325955 | 8.2:+18017243 | None:intergenic |
| AAGAAGGAATGTGATTATTA+AGG | 0.343485 | 8.2:-18017146 | MS.gene51041:CDS |
| CAATGGCTGCACAACCTACT+TGG | 0.345485 | 8.2:+18016014 | None:intergenic |
| TTTGCAGCAATGGCCATATT+GGG | 0.365439 | 8.2:-18016466 | MS.gene51041:CDS |
| CACCCTCAGCCCCTTCTGCC+CGG | 0.367068 | 8.2:-18016360 | MS.gene51041:CDS |
| CACCCTCCATCTGGGAGAAC+TGG | 0.369226 | 8.2:-18017105 | MS.gene51041:CDS |
| GAATGAGTGGAAGAGGATTT+GGG | 0.381725 | 8.2:+18017076 | None:intergenic |
| AAAACCAATCTCTTATTCTT+CGG | 0.383257 | 8.2:+18017190 | None:intergenic |
| ATTCCTTCAGTGACATTCTC+TGG | 0.388063 | 8.2:-18017057 | MS.gene51041:CDS |
| GACATTCTCTGGCCTTCTGC+AGG | 0.394844 | 8.2:-18017046 | MS.gene51041:intron |
| ATGTTAAAAGATGGTGATAA+TGG | 0.407105 | 8.2:+18017217 | None:intergenic |
| GGCAGAAGGGGCTGAGGGTG+AGG | 0.416383 | 8.2:+18016363 | None:intergenic |
| CAAACCGAAGAATAAGAGAT+TGG | 0.426795 | 8.2:-18017194 | MS.gene51041:CDS |
| TCAATCACAGTTGCACCATT+AGG | 0.429248 | 8.2:-18016409 | MS.gene51041:CDS |
| ACTGTGATTGAGAGTCCTTT+TGG | 0.443290 | 8.2:+18016421 | None:intergenic |
| GCACTCTTGGCTAGCAATCC+AGG | 0.449810 | 8.2:+18015965 | None:intergenic |
| TACCCGGGCAGAAGGGGCTG+AGG | 0.452991 | 8.2:+18016357 | None:intergenic |
| AGCAGCAACACTAGCACTCT+TGG | 0.457034 | 8.2:+18015952 | None:intergenic |
| TAGAATGCATCCTGCTGCCC+CGG | 0.459572 | 8.2:+18015719 | None:intergenic |
| ACCCTCAGCCCCTTCTGCCC+GGG | 0.469153 | 8.2:-18016359 | MS.gene51041:intron |
| ATTTGGGTTTGAAAGGAAGA+AGG | 0.469818 | 8.2:-18017162 | MS.gene51041:CDS |
| TTCGGTTTGATGTTAAAAGA+TGG | 0.478176 | 8.2:+18017208 | None:intergenic |
| CAAGTAGGTTGTGCAGCCAT+TGG | 0.487463 | 8.2:-18016013 | MS.gene51041:CDS |
| GATCAGTTATTGACACCAAA+AGG | 0.488111 | 8.2:-18016436 | MS.gene51041:CDS |
| GAAAAGCAATGGCATGCTTA+CGG | 0.488854 | 8.2:+18015791 | None:intergenic |
| AGAGCAGACACTGCTCCTAA+TGG | 0.490696 | 8.2:+18016394 | None:intergenic |
| ATCAGGGGCATTTGCAGCAA+TGG | 0.492588 | 8.2:-18016476 | MS.gene51041:intron |
| CATAAATTTGGTACTACCAC+CGG | 0.501343 | 8.2:+18017255 | None:intergenic |
| AGGTTTCCAGTTCTCCCAGA+TGG | 0.502717 | 8.2:+18017099 | None:intergenic |
| TTAGATTATTTGGGTTTGAA+AGG | 0.508877 | 8.2:-18017169 | MS.gene51041:CDS |
| CGTGGCCTCACCCTCCATCT+GGG | 0.513595 | 8.2:-18017113 | MS.gene51041:CDS |
| TTTCCAGTTCTCCCAGATGG+AGG | 0.521215 | 8.2:+18017102 | None:intergenic |
| AATGGCCATATTGGGAAAGA+TGG | 0.522770 | 8.2:-18016458 | MS.gene51041:CDS |
| ACTGAAGGAATGAGTGGAAG+AGG | 0.523502 | 8.2:+18017069 | None:intergenic |
| AATAGTAGTACCCGGGCAGA+AGG | 0.525314 | 8.2:+18016349 | None:intergenic |
| AATGGCTGCACAACCTACTT+GGG | 0.529946 | 8.2:+18016015 | None:intergenic |
| TAGTAGTACCCGGGCAGAAG+GGG | 0.552816 | 8.2:+18016351 | None:intergenic |
| GTTCTCCCAGATGGAGGGTG+AGG | 0.554854 | 8.2:+18017108 | None:intergenic |
| GGATTTGCAATATTTGGACC+TGG | 0.557125 | 8.2:-18015983 | MS.gene51041:CDS |
| TTCCAGTTCTCCCAGATGGA+GGG | 0.561076 | 8.2:+18017103 | None:intergenic |
| ATAGTAGTACCCGGGCAGAA+GGG | 0.569371 | 8.2:+18016350 | None:intergenic |
| AGTATGTTTATGGCCCAAGT+AGG | 0.569674 | 8.2:-18016028 | MS.gene51041:CDS |
| AATGTCACTGAAGGAATGAG+TGG | 0.582208 | 8.2:+18017063 | None:intergenic |
| AGAATGCATCCTGCTGCCCC+GGG | 0.589508 | 8.2:+18015720 | None:intergenic |
| ACCCGGGCAGAAGGGGCTGA+GGG | 0.592231 | 8.2:+18016358 | None:intergenic |
| ACAGCATCAATGAAAAGCAA+TGG | 0.607570 | 8.2:+18015780 | None:intergenic |
| TGCAAATCCCAAAACACCAA+TGG | 0.618790 | 8.2:+18015997 | None:intergenic |
| AGGCCAGAGAATGTCACTGA+AGG | 0.622535 | 8.2:+18017054 | None:intergenic |
| TCTTCTGTAATTGTTTCCGG+TGG | 0.651325 | 8.2:-18017271 | MS.gene51041:CDS |
| TGAGTGGAAGAGGATTTGGG+AGG | 0.662152 | 8.2:+18017079 | None:intergenic |
| TATTAAGGCATCAAGCGACG+TGG | 0.697251 | 8.2:-18017131 | MS.gene51041:CDS |
| GGTGATAATGGTAATGACAA+CGG | 0.705821 | 8.2:+18017229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAATAATAAATAAAAAAT+AGG | + | chr8.2:18015939-18015958 | None:intergenic | 10.0% |
| !! | GATAAATATCATTAATACAA+TGG | - | chr8.2:18016659-18016678 | MS.gene51041:intron | 15.0% |
| !! | TAAATTCATCTTTCAAATAA+AGG | + | chr8.2:18015961-18015980 | None:intergenic | 15.0% |
| !!! | AAAAAAACTTTTAAATGTGA+AGG | - | chr8.2:18016014-18016033 | MS.gene51041:CDS | 15.0% |
| !!! | ATTATAATACTATTTCTTTG+AGG | + | chr8.2:18016181-18016200 | None:intergenic | 15.0% |
| !!! | TATTACTACTATTTCTTTTT+AGG | - | chr8.2:18016627-18016646 | MS.gene51041:intron | 15.0% |
| !! | ACATAATAGTGAGATAAAAT+TGG | + | chr8.2:18016056-18016075 | None:intergenic | 20.0% |
| !! | TAATGATATTTATCCCATTA+AGG | + | chr8.2:18016653-18016672 | None:intergenic | 20.0% |
| !! | TGTGTTTATAAAAATCATCA+GGG | - | chr8.2:18016465-18016484 | MS.gene51041:CDS | 20.0% |
| !!! | AGATTGGTTTTAGATTATTT+GGG | - | chr8.2:18015779-18015798 | MS.gene51041:CDS | 20.0% |
| !!! | TAATTTTATCAAATCATTGC+CGG | + | chr8.2:18016723-18016742 | None:intergenic | 20.0% |
| !!! | TTTGTTGGTTTAATATTTGA+TGG | + | chr8.2:18017128-18017147 | None:intergenic | 20.0% |
| ! | AAAACCAATCTCTTATTCTT+CGG | + | chr8.2:18015770-18015789 | None:intergenic | 25.0% |
| ! | AAGAAGGAATGTGATTATTA+AGG | - | chr8.2:18015811-18015830 | MS.gene51041:intron | 25.0% |
| ! | ATGTTAAAAGATGGTGATAA+TGG | + | chr8.2:18015743-18015762 | None:intergenic | 25.0% |
| ! | GTGTGTTTATAAAAATCATC+AGG | - | chr8.2:18016464-18016483 | MS.gene51041:CDS | 25.0% |
| ! | GTGTTTATAAAAATCATCAG+GGG | - | chr8.2:18016466-18016485 | MS.gene51041:CDS | 25.0% |
| ! | TAAACACACATCAAAACAAA+AGG | + | chr8.2:18016453-18016472 | None:intergenic | 25.0% |
| ! | TAATAAGTATATCCATCTTG+TGG | + | chr8.2:18016109-18016128 | None:intergenic | 25.0% |
| ! | TTTAAATTATCTCCACAAGA+TGG | - | chr8.2:18016094-18016113 | MS.gene51041:intron | 25.0% |
| ! | TTTCATAAAATATGCTCTTG+TGG | + | chr8.2:18016208-18016227 | None:intergenic | 25.0% |
| !! | AATAACTTCTCATTTGAAAC+TGG | + | chr8.2:18016283-18016302 | None:intergenic | 25.0% |
| !! | GAGTACTTGTCAATAATTTT+TGG | - | chr8.2:18016397-18016416 | MS.gene51041:CDS | 25.0% |
| !! | TTAGATTATTTGGGTTTGAA+AGG | - | chr8.2:18015788-18015807 | MS.gene51041:CDS | 25.0% |
| !!! | AACAAAAGCATTTAAGTAGT+AGG | + | chr8.2:18016844-18016863 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTTATACCGTTG+TGG | + | chr8.2:18016004-18016023 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTTAGGCCTTAAT+GGG | - | chr8.2:18016637-18016656 | MS.gene51041:intron | 25.0% |
| !!! | GAGATTGGTTTTAGATTATT+TGG | - | chr8.2:18015778-18015797 | MS.gene51041:CDS | 25.0% |
| !!! | TATTTCTTTTTAGGCCTTAA+TGG | - | chr8.2:18016636-18016655 | MS.gene51041:intron | 25.0% |
| AACATTGAAGCAAAAATACC+TGG | + | chr8.2:18017070-18017089 | None:intergenic | 30.0% | |
| ACATTGAAGCAAAAATACCT+GGG | + | chr8.2:18017069-18017088 | None:intergenic | 30.0% | |
| ATAGTAGTAATAGTAGTACC+CGG | + | chr8.2:18016619-18016638 | None:intergenic | 30.0% | |
| ATGTCTTCTGTAATTGTTTC+CGG | - | chr8.2:18015683-18015702 | MS.gene51041:CDS | 30.0% | |
| ATTACTATTCTATGCCACAA+CGG | - | chr8.2:18015987-18016006 | MS.gene51041:CDS | 30.0% | |
| ! | CACGATATCACAAATTTTGT+TGG | + | chr8.2:18017143-18017162 | None:intergenic | 30.0% |
| ! | TTCGGTTTGATGTTAAAAGA+TGG | + | chr8.2:18015752-18015771 | None:intergenic | 30.0% |
| !!! | GTTTTGGGATTTGCAATATT+TGG | - | chr8.2:18016968-18016987 | MS.gene51041:intron | 30.0% |
| AAAAAATAGGAACCTGCAGA+AGG | + | chr8.2:18015926-18015945 | None:intergenic | 35.0% | |
| ACAGCATCAATGAAAAGCAA+TGG | + | chr8.2:18017180-18017199 | None:intergenic | 35.0% | |
| ACTTCTGCATAATCACACTT+AGG | + | chr8.2:18016907-18016926 | None:intergenic | 35.0% | |
| AGTTTCAACAGTTGAGTTTC+TGG | - | chr8.2:18017202-18017221 | MS.gene51041:CDS | 35.0% | |
| ATTGAAGCAAAAATACCTGG+GGG | + | chr8.2:18017067-18017086 | None:intergenic | 35.0% | |
| CAAACCGAAGAATAAGAGAT+TGG | - | chr8.2:18015763-18015782 | MS.gene51041:CDS | 35.0% | |
| CATAAATTTGGTACTACCAC+CGG | + | chr8.2:18015705-18015724 | None:intergenic | 35.0% | |
| CATTGAAGCAAAAATACCTG+GGG | + | chr8.2:18017068-18017087 | None:intergenic | 35.0% | |
| GATCAGTTATTGACACCAAA+AGG | - | chr8.2:18016521-18016540 | MS.gene51041:intron | 35.0% | |
| GCATATCAATGTTGTGATGA+TGG | + | chr8.2:18016338-18016357 | None:intergenic | 35.0% | |
| TAGTAGTAATAGTAGTACCC+GGG | + | chr8.2:18016618-18016637 | None:intergenic | 35.0% | |
| TGACAACGGTACCATAAATT+TGG | + | chr8.2:18015717-18015736 | None:intergenic | 35.0% | |
| ! | ATTTGGGTTTGAAAGGAAGA+AGG | - | chr8.2:18015795-18015814 | MS.gene51041:intron | 35.0% |
| ! | GCAGAAGTACAGTATGTTTA+TGG | - | chr8.2:18016919-18016938 | MS.gene51041:intron | 35.0% |
| ! | TTCTGGTATGTTTTGTATCC+CGG | - | chr8.2:18017219-18017238 | MS.gene51041:CDS | 35.0% |
| !! | GGTGATAATGGTAATGACAA+CGG | + | chr8.2:18015731-18015750 | None:intergenic | 35.0% |
| AATGGCCATATTGGGAAAGA+TGG | - | chr8.2:18016499-18016518 | MS.gene51041:intron | 40.0% | |
| AATGTCACTGAAGGAATGAG+TGG | + | chr8.2:18015897-18015916 | None:intergenic | 40.0% | |
| AGTATGTTTATGGCCCAAGT+AGG | - | chr8.2:18016929-18016948 | MS.gene51041:intron | 40.0% | |
| ATTCCTTCAGTGACATTCTC+TGG | - | chr8.2:18015900-18015919 | MS.gene51041:intron | 40.0% | |
| ATTTGCAGCAATGGCCATAT+TGG | - | chr8.2:18016490-18016509 | MS.gene51041:intron | 40.0% | |
| CGGTGGTAGTACCAAATTTA+TGG | - | chr8.2:18015703-18015722 | MS.gene51041:CDS | 40.0% | |
| CTGATCCATCTTTCCCAATA+TGG | + | chr8.2:18016507-18016526 | None:intergenic | 40.0% | |
| GAAAAGCAATGGCATGCTTA+CGG | + | chr8.2:18017169-18017188 | None:intergenic | 40.0% | |
| GAATGAGTGGAAGAGGATTT+GGG | + | chr8.2:18015884-18015903 | None:intergenic | 40.0% | |
| GGATTTGCAATATTTGGACC+TGG | - | chr8.2:18016974-18016993 | MS.gene51041:intron | 40.0% | |
| TCAATCACAGTTGCACCATT+AGG | - | chr8.2:18016548-18016567 | MS.gene51041:intron | 40.0% | |
| TCTTCTGTAATTGTTTCCGG+TGG | - | chr8.2:18015686-18015705 | MS.gene51041:CDS | 40.0% | |
| TGCAAATCCCAAAACACCAA+TGG | + | chr8.2:18016963-18016982 | None:intergenic | 40.0% | |
| TTGAAGCAAAAATACCTGGG+GGG | + | chr8.2:18017066-18017085 | None:intergenic | 40.0% | |
| TTTGCAGCAATGGCCATATT+GGG | - | chr8.2:18016491-18016510 | MS.gene51041:intron | 40.0% | |
| ! | ACTGTGATTGAGAGTCCTTT+TGG | + | chr8.2:18016539-18016558 | None:intergenic | 40.0% |
| ! | TCTGGTATGTTTTGTATCCC+GGG | - | chr8.2:18017220-18017239 | MS.gene51041:CDS | 40.0% |
| AATGGCTGCACAACCTACTT+GGG | + | chr8.2:18016945-18016964 | None:intergenic | 45.0% | |
| ACTGAAGGAATGAGTGGAAG+AGG | + | chr8.2:18015891-18015910 | None:intergenic | 45.0% | |
| CGACACTGATACATTGACAC+CGG | - | chr8.2:18016701-18016720 | MS.gene51041:intron | 45.0% | |
| GGAATGAGTGGAAGAGGATT+TGG | + | chr8.2:18015885-18015904 | None:intergenic | 45.0% | |
| ! | CTGGTATGTTTTGTATCCCG+GGG | - | chr8.2:18017221-18017240 | MS.gene51041:CDS | 45.0% |
| ! | TATTAAGGCATCAAGCGACG+TGG | - | chr8.2:18015826-18015845 | MS.gene51041:intron | 45.0% |
| !! | TGTGCAGCCATTGGTGTTTT+GGG | - | chr8.2:18016953-18016972 | MS.gene51041:intron | 45.0% |
| !! | TTGTGCAGCCATTGGTGTTT+TGG | - | chr8.2:18016952-18016971 | MS.gene51041:intron | 45.0% |
| AATAGTAGTACCCGGGCAGA+AGG | + | chr8.2:18016611-18016630 | None:intergenic | 50.0% | |
| AGAGCAGACACTGCTCCTAA+TGG | + | chr8.2:18016566-18016585 | None:intergenic | 50.0% | |
| AGCAGCAACACTAGCACTCT+TGG | + | chr8.2:18017008-18017027 | None:intergenic | 50.0% | |
| AGGCCAGAGAATGTCACTGA+AGG | + | chr8.2:18015906-18015925 | None:intergenic | 50.0% | |
| AGGTTTCCAGTTCTCCCAGA+TGG | + | chr8.2:18015861-18015880 | None:intergenic | 50.0% | |
| ATAGTAGTACCCGGGCAGAA+GGG | + | chr8.2:18016610-18016629 | None:intergenic | 50.0% | |
| CAAGTAGGTTGTGCAGCCAT+TGG | - | chr8.2:18016944-18016963 | MS.gene51041:intron | 50.0% | |
| CAATGGCTGCACAACCTACT+TGG | + | chr8.2:18016946-18016965 | None:intergenic | 50.0% | |
| TGAGTGGAAGAGGATTTGGG+AGG | + | chr8.2:18015881-18015900 | None:intergenic | 50.0% | |
| TTCCAGTTCTCCCAGATGGA+GGG | + | chr8.2:18015857-18015876 | None:intergenic | 50.0% | |
| TTTCCAGTTCTCCCAGATGG+AGG | + | chr8.2:18015858-18015877 | None:intergenic | 50.0% | |
| !! | ATCAGGGGCATTTGCAGCAA+TGG | - | chr8.2:18016481-18016500 | MS.gene51041:intron | 50.0% |
| GCACTCTTGGCTAGCAATCC+AGG | + | chr8.2:18016995-18017014 | None:intergenic | 55.0% | |
| TAGAATGCATCCTGCTGCCC+CGG | + | chr8.2:18017241-18017260 | None:intergenic | 55.0% | |
| TAGTAGTACCCGGGCAGAAG+GGG | + | chr8.2:18016609-18016628 | None:intergenic | 55.0% | |
| ! | GACATTCTCTGGCCTTCTGC+AGG | - | chr8.2:18015911-18015930 | MS.gene51041:CDS | 55.0% |
| AGAATGCATCCTGCTGCCCC+GGG | + | chr8.2:18017240-18017259 | None:intergenic | 60.0% | |
| CACCCTCCATCTGGGAGAAC+TGG | - | chr8.2:18015852-18015871 | MS.gene51041:intron | 60.0% | |
| GTTCTCCCAGATGGAGGGTG+AGG | + | chr8.2:18015852-18015871 | None:intergenic | 60.0% | |
| ! | ACTGACTCTGTTCACCCCCC+AGG | - | chr8.2:18017049-18017068 | MS.gene51041:CDS | 60.0% |
| ! | GTTTTGTATCCCGGGGCAGC+AGG | - | chr8.2:18017228-18017247 | MS.gene51041:CDS | 60.0% |
| ACGTGGCCTCACCCTCCATC+TGG | - | chr8.2:18015843-18015862 | MS.gene51041:intron | 65.0% | |
| CGTGGCCTCACCCTCCATCT+GGG | - | chr8.2:18015844-18015863 | MS.gene51041:intron | 65.0% | |
| ACCCGGGCAGAAGGGGCTGA+GGG | + | chr8.2:18016602-18016621 | None:intergenic | 70.0% | |
| ACCCTCAGCCCCTTCTGCCC+GGG | - | chr8.2:18016598-18016617 | MS.gene51041:intron | 70.0% | |
| CACCCTCAGCCCCTTCTGCC+CGG | - | chr8.2:18016597-18016616 | MS.gene51041:intron | 70.0% | |
| GGCAGAAGGGGCTGAGGGTG+AGG | + | chr8.2:18016597-18016616 | None:intergenic | 70.0% | |
| TACCCGGGCAGAAGGGGCTG+AGG | + | chr8.2:18016603-18016622 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18015683 | 18017296 | 18015683 | ID=MS.gene51041 |
| chr8.2 | mRNA | 18015683 | 18017296 | 18015683 | ID=MS.gene51041.t1;Parent=MS.gene51041 |
| chr8.2 | exon | 18017047 | 18017296 | 18017047 | ID=MS.gene51041.t1.exon1;Parent=MS.gene51041.t1 |
| chr8.2 | CDS | 18017047 | 18017296 | 18017047 | ID=cds.MS.gene51041.t1;Parent=MS.gene51041.t1 |
| chr8.2 | exon | 18016360 | 18016493 | 18016360 | ID=MS.gene51041.t1.exon2;Parent=MS.gene51041.t1 |
| chr8.2 | CDS | 18016360 | 18016493 | 18016360 | ID=cds.MS.gene51041.t1;Parent=MS.gene51041.t1 |
| chr8.2 | exon | 18015909 | 18016056 | 18015909 | ID=MS.gene51041.t1.exon3;Parent=MS.gene51041.t1 |
| chr8.2 | CDS | 18015909 | 18016056 | 18015909 | ID=cds.MS.gene51041.t1;Parent=MS.gene51041.t1 |
| chr8.2 | exon | 18015683 | 18015813 | 18015683 | ID=MS.gene51041.t1.exon4;Parent=MS.gene51041.t1 |
| chr8.2 | CDS | 18015683 | 18015813 | 18015683 | ID=cds.MS.gene51041.t1;Parent=MS.gene51041.t1 |
| Gene Sequence |
| Protein sequence |
