Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060525.t1 | XP_024629387.1 | 100 | 106 | 0 | 0 | 1 | 106 | 1 | 106 | 9.10E-57 | 229.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060525.t1 | Q9T096 | 66.7 | 102 | 34 | 0 | 1 | 102 | 1 | 102 | 1.3e-35 | 150.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060525.t1 | A0A072TN09 | 100.0 | 106 | 0 | 0 | 1 | 106 | 1 | 106 | 6.5e-57 | 229.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene060525 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene050559 | MS.gene060525 | 0.814439 | 1.54E-51 | -1.69E-46 |
| MS.gene050562 | MS.gene060525 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene060525 | 0.840087 | 1.07E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene060525 | 0.82318 | 1.59E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene060525 | 0.814661 | 1.38E-51 | -1.69E-46 |
| MS.gene059145 | MS.gene060525 | 0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene060525 | -0.830695 | 2.54E-55 | -1.69E-46 |
| MS.gene060525 | MS.gene061564 | 0.848895 | 4.58E-60 | -1.69E-46 |
| MS.gene060525 | MS.gene061729 | 0.80129 | 9.65E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene065055 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene068383 | 0.880815 | 4.02E-70 | -1.69E-46 |
| MS.gene060525 | MS.gene21536 | 0.824672 | 7.11E-54 | -1.69E-46 |
| MS.gene060525 | MS.gene27646 | -0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene29631 | 0.836379 | 9.69E-57 | -1.69E-46 |
| MS.gene060525 | MS.gene32688 | 0.8329 | 7.26E-56 | -1.69E-46 |
| MS.gene060525 | MS.gene32893 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene32965 | 0.803686 | 3.10E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene34950 | 0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene42653 | 0.832919 | 7.18E-56 | -1.69E-46 |
| MS.gene060525 | MS.gene43972 | 0.80772 | 4.40E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene47990 | 0.810376 | 1.19E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene48037 | 0.819177 | 1.33E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene51038 | -0.832609 | 8.57E-56 | -1.69E-46 |
| MS.gene060525 | MS.gene51040 | -0.828375 | 9.31E-55 | -1.69E-46 |
| MS.gene060525 | MS.gene51041 | -0.816841 | 4.49E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene51071 | -0.828122 | 1.07E-54 | -1.69E-46 |
| MS.gene060525 | MS.gene51072 | -0.824573 | 7.50E-54 | -1.69E-46 |
| MS.gene060525 | MS.gene51454 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene52627 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene52849 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene060525 | MS.gene55818 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene59241 | 0.807034 | 6.16E-50 | -1.69E-46 |
| MS.gene060525 | MS.gene59242 | 0.816553 | 5.21E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene68198 | 0.815622 | 8.41E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene72126 | 0.804372 | 2.23E-49 | -1.69E-46 |
| MS.gene060525 | MS.gene74537 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene74606 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene75521 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene060525 | MS.gene76227 | 0.837648 | 4.59E-57 | -1.69E-46 |
| MS.gene060525 | MS.gene76244 | 0.825314 | 5.02E-54 | -1.69E-46 |
| MS.gene060525 | MS.gene76314 | 0.836307 | 1.01E-56 | -1.69E-46 |
| MS.gene060525 | MS.gene80201 | 0.83483 | 2.39E-56 | -1.69E-46 |
| MS.gene060525 | MS.gene80687 | 0.811127 | 8.18E-51 | -1.69E-46 |
| MS.gene060525 | MS.gene84737 | 0.880742 | 4.27E-70 | -1.69E-46 |
| MS.gene060525 | MS.gene93123 | 0.829868 | 4.05E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060525.t1 | MTR_8g027255 | 100.000 | 106 | 0 | 0 | 1 | 106 | 1 | 106 | 4.12e-77 | 222 |
| MS.gene060525.t1 | MTR_3g091840 | 67.619 | 105 | 34 | 0 | 1 | 105 | 1 | 105 | 1.81e-50 | 155 |
| MS.gene060525.t1 | MTR_1g077750 | 63.736 | 91 | 33 | 0 | 1 | 91 | 1 | 91 | 1.24e-42 | 135 |
| MS.gene060525.t1 | MTR_5g082490 | 50.505 | 99 | 49 | 0 | 8 | 106 | 12 | 110 | 1.75e-33 | 113 |
| MS.gene060525.t1 | MTR_3g070330 | 52.128 | 94 | 45 | 0 | 8 | 101 | 35 | 128 | 2.35e-33 | 113 |
| MS.gene060525.t1 | MTR_3g070330 | 52.747 | 91 | 43 | 0 | 8 | 98 | 35 | 125 | 4.37e-32 | 109 |
| MS.gene060525.t1 | MTR_4g088505 | 50.000 | 100 | 49 | 1 | 3 | 102 | 8 | 106 | 1.05e-30 | 105 |
| MS.gene060525.t1 | MTR_7g068250 | 48.454 | 97 | 50 | 0 | 10 | 106 | 14 | 110 | 5.58e-30 | 103 |
| MS.gene060525.t1 | MTR_2g078670 | 48.421 | 95 | 49 | 0 | 8 | 102 | 12 | 106 | 9.53e-29 | 100 |
| MS.gene060525.t1 | MTR_8g058785 | 44.211 | 95 | 53 | 0 | 8 | 102 | 12 | 106 | 2.42e-26 | 95.1 |
| MS.gene060525.t1 | MTR_8g061270 | 44.211 | 95 | 53 | 0 | 8 | 102 | 12 | 106 | 2.42e-26 | 95.1 |
| MS.gene060525.t1 | MTR_4g088505 | 48.101 | 79 | 40 | 1 | 3 | 81 | 8 | 85 | 3.41e-21 | 81.6 |
| MS.gene060525.t1 | MTR_1g077760 | 67.273 | 55 | 18 | 0 | 44 | 98 | 1 | 55 | 1.47e-20 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060525.t1 | AT4G27745 | 66.667 | 102 | 34 | 0 | 1 | 102 | 1 | 102 | 1.56e-47 | 147 |
| MS.gene060525.t1 | AT4G27745 | 66.667 | 102 | 34 | 0 | 1 | 102 | 1 | 102 | 1.56e-47 | 147 |
| MS.gene060525.t1 | AT4G27745 | 66.667 | 102 | 34 | 0 | 1 | 102 | 1 | 102 | 1.56e-47 | 147 |
| MS.gene060525.t1 | AT4G27745 | 66.667 | 102 | 34 | 0 | 1 | 102 | 1 | 102 | 1.56e-47 | 147 |
| MS.gene060525.t1 | AT3G11230 | 50.505 | 99 | 49 | 0 | 8 | 106 | 12 | 110 | 1.18e-34 | 115 |
| MS.gene060525.t1 | AT3G11230 | 50.505 | 99 | 49 | 0 | 8 | 106 | 45 | 143 | 4.30e-34 | 115 |
| MS.gene060525.t1 | AT3G11230 | 52.174 | 92 | 44 | 0 | 8 | 99 | 12 | 103 | 1.69e-33 | 112 |
| MS.gene060525.t1 | AT4G27740 | 51.064 | 94 | 46 | 0 | 9 | 102 | 9 | 102 | 2.61e-33 | 112 |
| MS.gene060525.t1 | AT3G55890 | 52.475 | 101 | 47 | 1 | 1 | 101 | 6 | 105 | 3.09e-33 | 112 |
| MS.gene060525.t1 | AT3G55890 | 52.475 | 101 | 47 | 1 | 1 | 101 | 6 | 105 | 3.09e-33 | 112 |
| MS.gene060525.t1 | AT3G11230 | 52.747 | 91 | 43 | 0 | 8 | 98 | 45 | 135 | 5.78e-33 | 112 |
| MS.gene060525.t1 | AT5G53940 | 50.526 | 95 | 47 | 0 | 8 | 102 | 12 | 106 | 2.16e-32 | 110 |
| MS.gene060525.t1 | AT2G40110 | 49.495 | 99 | 50 | 0 | 8 | 106 | 12 | 110 | 3.76e-32 | 109 |
| MS.gene060525.t1 | AT3G55890 | 52.577 | 97 | 45 | 1 | 1 | 97 | 6 | 101 | 4.29e-32 | 108 |
| MS.gene060525.t1 | AT3G55890 | 52.577 | 97 | 45 | 1 | 1 | 97 | 6 | 101 | 4.29e-32 | 108 |
| MS.gene060525.t1 | AT3G08990 | 50.000 | 102 | 50 | 1 | 1 | 102 | 6 | 106 | 8.69e-32 | 108 |
| MS.gene060525.t1 | AT3G08990 | 50.000 | 102 | 50 | 1 | 1 | 102 | 6 | 106 | 8.69e-32 | 108 |
| MS.gene060525.t1 | AT3G08990 | 50.000 | 102 | 50 | 1 | 1 | 102 | 6 | 106 | 8.69e-32 | 108 |
| MS.gene060525.t1 | AT2G40110 | 50.000 | 92 | 46 | 0 | 8 | 99 | 12 | 103 | 8.60e-31 | 105 |
| MS.gene060525.t1 | AT2G40110 | 45.205 | 73 | 40 | 0 | 8 | 80 | 12 | 84 | 1.25e-21 | 82.0 |
| MS.gene060525.t1 | AT2G40110 | 45.205 | 73 | 40 | 0 | 8 | 80 | 12 | 84 | 1.25e-21 | 82.0 |
Find 19 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTTCCTCATAAGCTTTA+AGG | 0.102549 | 8.1:-75153013 | None:intergenic |
| TGAGAAGTTTAAGATTGTTT+TGG | 0.258269 | 8.1:+75153064 | MS.gene060525:CDS |
| AAAGTTCACCTGAAAATCTT+TGG | 0.258418 | 8.1:-75152112 | None:intergenic |
| ATAAGCTGTCTATCTTCTTT+AGG | 0.260634 | 8.1:-75152924 | None:intergenic |
| ATCATTAATGGCCGATTTGA+TGG | 0.329137 | 8.1:+75152026 | None:intergenic |
| CATGGAAAGCAACAAGGTTC+TGG | 0.376925 | 8.1:-75152077 | None:intergenic |
| TGAGGAAACACAGAAGTATA+AGG | 0.390368 | 8.1:+75153025 | MS.gene060525:CDS |
| GAAATACCTTAAAGCTTATG+AGG | 0.433394 | 8.1:+75153007 | MS.gene060525:CDS |
| GGCCGATTTGATGGGATCAC+GGG | 0.488237 | 8.1:+75152035 | MS.gene060525:CDS |
| TGCCCGTGATCCCATCAAAT+CGG | 0.500160 | 8.1:-75152037 | None:intergenic |
| TCATTAATGGCCGATTTGAT+GGG | 0.534012 | 8.1:+75152027 | None:intergenic |
| TGGCCGATTTGATGGGATCA+CGG | 0.537450 | 8.1:+75152034 | MS.gene060525:CDS |
| TATGTTTAACAGGCAAGCAA+TGG | 0.540111 | 8.1:+75152858 | MS.gene060525:intron |
| CTTTGGAAACAATATCATCA+TGG | 0.545782 | 8.1:-75152095 | None:intergenic |
| TCTGATTGTGGAGAAGAACT+TGG | 0.556503 | 8.1:+75152981 | MS.gene060525:CDS |
| ATTGTGGAGAAGAACTTGGT+TGG | 0.558548 | 8.1:+75152985 | MS.gene060525:CDS |
| GAAGATAGACAGCTTATGAC+TGG | 0.563935 | 8.1:+75152930 | MS.gene060525:CDS |
| GAAACACAGAAGTATAAGGA+AGG | 0.612715 | 8.1:+75153029 | MS.gene060525:CDS |
| TATCATCATGGAAAGCAACA+AGG | 0.636612 | 8.1:-75152083 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTTGTTTAAATCAAA+TGG | + | chr8.1:75152267-75152286 | MS.gene060525:intron | 10.0% |
| !!! | AATTTACAATATGATTTTTT+TGG | - | chr8.1:75152675-75152694 | None:intergenic | 10.0% |
| !!! | TTAATTTGTTGAATATTAAT+TGG | + | chr8.1:75152772-75152791 | MS.gene060525:intron | 10.0% |
| !!! | AATTTTTTCTCTAAATCTAA+CGG | - | chr8.1:75152254-75152273 | None:intergenic | 15.0% |
| !!! | ACTTTTCTTTCTTTCAATTT+TGG | + | chr8.1:75152130-75152149 | MS.gene060525:intron | 20.0% |
| ! | AGAAGAAATGAAACAATCAT+TGG | + | chr8.1:75152574-75152593 | MS.gene060525:intron | 25.0% |
| ! | AGAGAAGTGAAATTAATTTC+AGG | - | chr8.1:75152485-75152504 | None:intergenic | 25.0% |
| ! | ATTAATTTCACTTCTCTCAA+TGG | + | chr8.1:75152488-75152507 | MS.gene060525:intron | 25.0% |
| ! | TGAATATTAATTGGACAAGA+GGG | + | chr8.1:75152781-75152800 | MS.gene060525:intron | 25.0% |
| ! | TTCATTTCTTCTGATCAATT+CGG | - | chr8.1:75152566-75152585 | None:intergenic | 25.0% |
| ! | TTGAATATTAATTGGACAAG+AGG | + | chr8.1:75152780-75152799 | MS.gene060525:intron | 25.0% |
| ! | TTTCAAAGGTTATGTTTAAC+AGG | + | chr8.1:75152848-75152867 | MS.gene060525:intron | 25.0% |
| !! | TAACCTCAAAAGATTTTCAA+AGG | + | chr8.1:75152834-75152853 | MS.gene060525:intron | 25.0% |
| !! | TATTAGATGATCCATTTTCA+TGG | - | chr8.1:75152203-75152222 | None:intergenic | 25.0% |
| !! | TATTGTTTCCAAAGATTTTC+AGG | + | chr8.1:75152104-75152123 | MS.gene060525:CDS | 25.0% |
| !!! | GAGAAGTTTAAGATTGTTTT+GGG | + | chr8.1:75153065-75153084 | MS.gene060525:CDS | 25.0% |
| !!! | TAACCTTTGAAAATCTTTTG+AGG | - | chr8.1:75152840-75152859 | None:intergenic | 25.0% |
| !!! | TGAGAAGTTTAAGATTGTTT+TGG | + | chr8.1:75153064-75153083 | MS.gene060525:CDS | 25.0% |
| !!! | TTAAGATTGTTTTGGGAAAT+GGG | + | chr8.1:75153072-75153091 | MS.gene060525:CDS | 25.0% |
| !!! | TTTAAGATTGTTTTGGGAAA+TGG | + | chr8.1:75153071-75153090 | MS.gene060525:CDS | 25.0% |
| AAACGATTCATCCATGAAAA+TGG | + | chr8.1:75152189-75152208 | MS.gene060525:intron | 30.0% | |
| AAAGTTCACCTGAAAATCTT+TGG | - | chr8.1:75152115-75152134 | None:intergenic | 30.0% | |
| AAATGGATCATCTAATACTG+TGG | + | chr8.1:75152206-75152225 | MS.gene060525:intron | 30.0% | |
| AGCTTTCATCGTGATTATAT+TGG | - | chr8.1:75152452-75152471 | None:intergenic | 30.0% | |
| ATAAGCTGTCTATCTTCTTT+AGG | - | chr8.1:75152927-75152946 | None:intergenic | 30.0% | |
| GAAATACCTTAAAGCTTATG+AGG | + | chr8.1:75153007-75153026 | MS.gene060525:CDS | 30.0% | |
| GCTTTCATCGTGATTATATT+GGG | - | chr8.1:75152451-75152470 | None:intergenic | 30.0% | |
| TAAAGGAAATGGACAAAATC+CGG | - | chr8.1:75152629-75152648 | None:intergenic | 30.0% | |
| ! | CATGCCATGAACATATTTTT+GGG | + | chr8.1:75152900-75152919 | MS.gene060525:CDS | 30.0% |
| ! | CTTTGGAAACAATATCATCA+TGG | - | chr8.1:75152098-75152117 | None:intergenic | 30.0% |
| ! | TCATGCCATGAACATATTTT+TGG | + | chr8.1:75152899-75152918 | MS.gene060525:CDS | 30.0% |
| !!! | GATGTTTTTTGTTCTGATTG+TGG | + | chr8.1:75152969-75152988 | MS.gene060525:CDS | 30.0% |
| !!! | TTGGTTTTAATTTAACCCTC+TGG | - | chr8.1:75152656-75152675 | None:intergenic | 30.0% |
| ACCCAAAAAATGTCTTCTAG+TGG | - | chr8.1:75152350-75152369 | None:intergenic | 35.0% | |
| AGGTCCCAAAAATATGTTCA+TGG | - | chr8.1:75152907-75152926 | None:intergenic | 35.0% | |
| ATATTAATTGGACAAGAGGG+TGG | + | chr8.1:75152784-75152803 | MS.gene060525:intron | 35.0% | |
| CCCAAAAAATGTCTTCTAGT+GGG | - | chr8.1:75152349-75152368 | None:intergenic | 35.0% | |
| GTGTTTCCTCATAAGCTTTA+AGG | - | chr8.1:75153016-75153035 | None:intergenic | 35.0% | |
| TATCATCATGGAAAGCAACA+AGG | - | chr8.1:75152086-75152105 | None:intergenic | 35.0% | |
| TATGTTTAACAGGCAAGCAA+TGG | + | chr8.1:75152858-75152877 | MS.gene060525:intron | 35.0% | |
| TGCTTAACGAGCTTCAATTA+AGG | + | chr8.1:75152540-75152559 | MS.gene060525:intron | 35.0% | |
| ! | AAAATGTCTTCTAGTGGGTA+TGG | - | chr8.1:75152344-75152363 | None:intergenic | 35.0% |
| ! | GAAACACAGAAGTATAAGGA+AGG | + | chr8.1:75153029-75153048 | MS.gene060525:CDS | 35.0% |
| ! | GGATTTTGTCCATTTCCTTT+AGG | + | chr8.1:75152628-75152647 | MS.gene060525:intron | 35.0% |
| ! | TGAGGAAACACAGAAGTATA+AGG | + | chr8.1:75153025-75153044 | MS.gene060525:CDS | 35.0% |
| !!! | ACCCACTAGAAGACATTTTT+TGG | + | chr8.1:75152345-75152364 | MS.gene060525:intron | 35.0% |
| !!! | CCCACTAGAAGACATTTTTT+GGG | + | chr8.1:75152346-75152365 | MS.gene060525:intron | 35.0% |
| AATCAAATGGTTCCTACCAC+AGG | + | chr8.1:75152280-75152299 | MS.gene060525:intron | 40.0% | |
| ATCAAATGGTTCCTACCACA+GGG | + | chr8.1:75152281-75152300 | MS.gene060525:intron | 40.0% | |
| ATTGTGGAGAAGAACTTGGT+TGG | + | chr8.1:75152985-75153004 | MS.gene060525:CDS | 40.0% | |
| CAGGGATGTTCTTCTACTTA+TGG | + | chr8.1:75152299-75152318 | MS.gene060525:intron | 40.0% | |
| CTTACTTTGTGACTGAACTC+CGG | + | chr8.1:75152607-75152626 | MS.gene060525:intron | 40.0% | |
| GAAGATAGACAGCTTATGAC+TGG | + | chr8.1:75152930-75152949 | MS.gene060525:CDS | 40.0% | |
| TAAGTAGAAGAACATCCCTG+TGG | - | chr8.1:75152299-75152318 | None:intergenic | 40.0% | |
| TCTGATTGTGGAGAAGAACT+TGG | + | chr8.1:75152981-75153000 | MS.gene060525:CDS | 40.0% | |
| TGGGTATGGATGAACGAAAT+TGG | - | chr8.1:75152330-75152349 | None:intergenic | 40.0% | |
| ! | CATTTCCTTTAGGAACCAGA+GGG | + | chr8.1:75152638-75152657 | MS.gene060525:intron | 40.0% |
| ! | TTTAACCCTCTGGTTCCTAA+AGG | - | chr8.1:75152646-75152665 | None:intergenic | 40.0% |
| CATGGAAAGCAACAAGGTTC+TGG | - | chr8.1:75152080-75152099 | None:intergenic | 45.0% | |
| TAATTGGACAAGAGGGTGGT+TGG | + | chr8.1:75152788-75152807 | MS.gene060525:intron | 45.0% | |
| TAGAAGAACATCCCTGTGGT+AGG | - | chr8.1:75152295-75152314 | None:intergenic | 45.0% | |
| ! | ACTGTGGAATAGTGTTGCTG+CGG | + | chr8.1:75152222-75152241 | MS.gene060525:intron | 45.0% |
| ! | CCATTTCCTTTAGGAACCAG+AGG | + | chr8.1:75152637-75152656 | MS.gene060525:intron | 45.0% |
| ! | CCTCTGGTTCCTAAAGGAAA+TGG | - | chr8.1:75152640-75152659 | None:intergenic | 45.0% |
| TGCCCGTGATCCCATCAAAT+CGG | - | chr8.1:75152040-75152059 | None:intergenic | 50.0% | |
| !! | TGGCCGATTTGATGGGATCA+CGG | + | chr8.1:75152034-75152053 | MS.gene060525:CDS | 50.0% |
| !! | GGCCGATTTGATGGGATCAC+GGG | + | chr8.1:75152035-75152054 | MS.gene060525:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 75152033 | 75153097 | 75152033 | ID=MS.gene060525 |
| chr8.1 | mRNA | 75152033 | 75153097 | 75152033 | ID=MS.gene060525.t1;Parent=MS.gene060525 |
| chr8.1 | exon | 75152033 | 75152125 | 75152033 | ID=MS.gene060525.t1.exon1;Parent=MS.gene060525.t1 |
| chr8.1 | CDS | 75152033 | 75152125 | 75152033 | ID=cds.MS.gene060525.t1;Parent=MS.gene060525.t1 |
| chr8.1 | exon | 75152870 | 75153097 | 75152870 | ID=MS.gene060525.t1.exon2;Parent=MS.gene060525.t1 |
| chr8.1 | CDS | 75152870 | 75153097 | 75152870 | ID=cds.MS.gene060525.t1;Parent=MS.gene060525.t1 |
| Gene Sequence |
| Protein sequence |
