Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51040.t1 | XP_003608984.1 | 90.3 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 1.50E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51040.t1 | G7JPV2 | 90.3 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 1.1e-98 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene51040 | -0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene51040 | -0.805333 | 1.40E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene51040 | -0.821896 | 3.16E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene51040 | -0.823366 | 1.44E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene51040 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene51040 | -0.806205 | 9.21E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene51040 | -0.810919 | 9.07E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene51040 | -0.806204 | 9.22E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene51040 | -0.85257 | 4.23E-61 | -1.69E-46 |
| MS.gene057684 | MS.gene51040 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene51040 | 0.859441 | 4.13E-63 | -1.69E-46 |
| MS.gene060525 | MS.gene51040 | -0.828375 | 9.31E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51040 | MS.gene001161 | PPI |
| MS.gene51040 | MS.gene51072 | PPI |
| MS.gene51071 | MS.gene51040 | PPI |
| MS.gene51041 | MS.gene51040 | PPI |
| MS.gene033167 | MS.gene51040 | PPI |
| MS.gene51038 | MS.gene51040 | PPI |
| MS.gene001161 | MS.gene51040 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51040.t1 | MTR_4g107630 | 90.278 | 216 | 18 | 1 | 1 | 213 | 1 | 216 | 2.90e-136 | 381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51040.t1 | AT5G62720 | 56.322 | 174 | 73 | 2 | 42 | 213 | 58 | 230 | 5.88e-67 | 206 |
| MS.gene51040.t1 | AT3G47980 | 62.577 | 163 | 61 | 0 | 51 | 213 | 77 | 239 | 1.77e-65 | 202 |
| MS.gene51040.t1 | AT5G62720 | 55.072 | 138 | 59 | 2 | 42 | 177 | 58 | 194 | 2.45e-46 | 152 |
Find 61 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCAACAGTTGAGTTTC+TGG | 0.125934 | 8.2:-18045215 | MS.gene51040:CDS |
| CGGTGGTAGTACCAAATTTA+TGG | 0.147539 | 8.2:-18046716 | MS.gene51040:CDS |
| GCAGAAGTACAGTATGTTTA+TGG | 0.153489 | 8.2:-18045498 | MS.gene51040:intron |
| ATGTCTTCTGTAATTGTTTC+CGG | 0.215984 | 8.2:-18046736 | MS.gene51040:CDS |
| GGAATGAGTGGAAGAGGATT+TGG | 0.281069 | 8.2:+18046537 | None:intergenic |
| ATTTGCAGCAATGGCCATAT+TGG | 0.282337 | 8.2:-18045927 | MS.gene51040:CDS |
| TTGTGCAGCCATTGGTGTTT+TGG | 0.288656 | 8.2:-18045465 | MS.gene51040:CDS |
| CTGATCCATCTTTCCCAATA+TGG | 0.299857 | 8.2:+18045913 | None:intergenic |
| ACGTGGCCTCACCCTCCATC+TGG | 0.304995 | 8.2:-18046576 | MS.gene51040:CDS |
| TGACAACGGTACCATAAATT+TGG | 0.325955 | 8.2:+18046705 | None:intergenic |
| AAGAAGGAATGTGATTATTA+AGG | 0.343485 | 8.2:-18046608 | MS.gene51040:CDS |
| CAATGGCTGCACAACCTACT+TGG | 0.345485 | 8.2:+18045474 | None:intergenic |
| TTTGCAGCAATGGCCATATT+GGG | 0.365439 | 8.2:-18045926 | MS.gene51040:CDS |
| CACCCTCAGCCCCTTCTGCC+CGG | 0.367068 | 8.2:-18045820 | MS.gene51040:CDS |
| CACCCTCCATCTGGGAGAAC+TGG | 0.369226 | 8.2:-18046567 | MS.gene51040:CDS |
| GAATGAGTGGAAGAGGATTT+GGG | 0.381725 | 8.2:+18046538 | None:intergenic |
| AAAACCAATCTCTTATTCTT+CGG | 0.383257 | 8.2:+18046652 | None:intergenic |
| ATTCCTTCAGTGACATTCTC+TGG | 0.388063 | 8.2:-18046519 | MS.gene51040:CDS |
| GACATTCTCTGGCCTTCTGC+AGG | 0.394844 | 8.2:-18046508 | MS.gene51040:intron |
| ATGTTAAAAGATGGTGATAA+TGG | 0.407105 | 8.2:+18046679 | None:intergenic |
| GGCAGAAGGGGCTGAGGGTG+AGG | 0.416383 | 8.2:+18045823 | None:intergenic |
| CAAACCGAAGAATAAGAGAT+TGG | 0.426795 | 8.2:-18046656 | MS.gene51040:CDS |
| TCAATCACAGTTGCACCATT+AGG | 0.429248 | 8.2:-18045869 | MS.gene51040:CDS |
| ACTGTGATTGAGAGTCCTTT+TGG | 0.443290 | 8.2:+18045881 | None:intergenic |
| GCACTCTTGGCTAGCAATCC+AGG | 0.449810 | 8.2:+18045425 | None:intergenic |
| TACCCGGGCAGAAGGGGCTG+AGG | 0.452991 | 8.2:+18045817 | None:intergenic |
| AGCAGCAACACTAGCACTCT+TGG | 0.457034 | 8.2:+18045412 | None:intergenic |
| TAGAATGCATCCTGCTGCCC+CGG | 0.459572 | 8.2:+18045179 | None:intergenic |
| ACCCTCAGCCCCTTCTGCCC+GGG | 0.469153 | 8.2:-18045819 | MS.gene51040:intron |
| ATTTGGGTTTGAAAGGAAGA+AGG | 0.469818 | 8.2:-18046624 | MS.gene51040:CDS |
| TTCGGTTTGATGTTAAAAGA+TGG | 0.478176 | 8.2:+18046670 | None:intergenic |
| CAAGTAGGTTGTGCAGCCAT+TGG | 0.487463 | 8.2:-18045473 | MS.gene51040:CDS |
| GATCAGTTATTGACACCAAA+AGG | 0.488111 | 8.2:-18045896 | MS.gene51040:CDS |
| GAAAAGCAATGGCATGCTTA+CGG | 0.488854 | 8.2:+18045251 | None:intergenic |
| AGAGCAGACACTGCTCCTAA+TGG | 0.490696 | 8.2:+18045854 | None:intergenic |
| ATCAGGGGCATTTGCAGCAA+TGG | 0.492588 | 8.2:-18045936 | MS.gene51040:intron |
| CATAAATTTGGTACTACCAC+CGG | 0.501343 | 8.2:+18046717 | None:intergenic |
| AGGTTTCCAGTTCTCCCAGA+TGG | 0.502717 | 8.2:+18046561 | None:intergenic |
| TTAGATTATTTGGGTTTGAA+AGG | 0.508877 | 8.2:-18046631 | MS.gene51040:CDS |
| CGTGGCCTCACCCTCCATCT+GGG | 0.513595 | 8.2:-18046575 | MS.gene51040:CDS |
| TTTCCAGTTCTCCCAGATGG+AGG | 0.521215 | 8.2:+18046564 | None:intergenic |
| AATGGCCATATTGGGAAAGA+TGG | 0.522770 | 8.2:-18045918 | MS.gene51040:CDS |
| ACTGAAGGAATGAGTGGAAG+AGG | 0.523502 | 8.2:+18046531 | None:intergenic |
| AATAGTAGTACCCGGGCAGA+AGG | 0.525314 | 8.2:+18045809 | None:intergenic |
| AATGGCTGCACAACCTACTT+GGG | 0.529946 | 8.2:+18045475 | None:intergenic |
| TAGTAGTACCCGGGCAGAAG+GGG | 0.552816 | 8.2:+18045811 | None:intergenic |
| GTTCTCCCAGATGGAGGGTG+AGG | 0.554854 | 8.2:+18046570 | None:intergenic |
| GGATTTGCAATATTTGGACC+TGG | 0.557125 | 8.2:-18045443 | MS.gene51040:CDS |
| TTCCAGTTCTCCCAGATGGA+GGG | 0.561076 | 8.2:+18046565 | None:intergenic |
| ATAGTAGTACCCGGGCAGAA+GGG | 0.569371 | 8.2:+18045810 | None:intergenic |
| AGTATGTTTATGGCCCAAGT+AGG | 0.569674 | 8.2:-18045488 | MS.gene51040:CDS |
| AATGTCACTGAAGGAATGAG+TGG | 0.582208 | 8.2:+18046525 | None:intergenic |
| AGAATGCATCCTGCTGCCCC+GGG | 0.589508 | 8.2:+18045180 | None:intergenic |
| ACCCGGGCAGAAGGGGCTGA+GGG | 0.592231 | 8.2:+18045818 | None:intergenic |
| ACAGCATCAATGAAAAGCAA+TGG | 0.607570 | 8.2:+18045240 | None:intergenic |
| TGCAAATCCCAAAACACCAA+TGG | 0.618790 | 8.2:+18045457 | None:intergenic |
| AGGCCAGAGAATGTCACTGA+AGG | 0.622535 | 8.2:+18046516 | None:intergenic |
| TCTTCTGTAATTGTTTCCGG+TGG | 0.651325 | 8.2:-18046733 | MS.gene51040:CDS |
| TGAGTGGAAGAGGATTTGGG+AGG | 0.662152 | 8.2:+18046541 | None:intergenic |
| TATTAAGGCATCAAGCGACG+TGG | 0.697251 | 8.2:-18046593 | MS.gene51040:CDS |
| GGTGATAATGGTAATGACAA+CGG | 0.705821 | 8.2:+18046691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAATAATAAATAAAAAAT+AGG | + | chr8.2:18045423-18045442 | None:intergenic | 10.0% |
| !! | GATAAATATCATTAATACAA+TGG | - | chr8.2:18046145-18046164 | MS.gene51040:intron | 15.0% |
| !! | TAAATTCATCTTTCAAATAA+AGG | + | chr8.2:18045445-18045464 | None:intergenic | 15.0% |
| !!! | AAAAAACTTTTTAAATGTGA+AGG | - | chr8.2:18045499-18045518 | MS.gene51040:intron | 15.0% |
| !!! | ATTATAATACTATTTCTTTG+AGG | + | chr8.2:18045666-18045685 | None:intergenic | 15.0% |
| !!! | TATTACTACTATTTCTTTTT+AGG | - | chr8.2:18046113-18046132 | MS.gene51040:intron | 15.0% |
| !! | ACATAATAGTGAGATAAAAT+TGG | + | chr8.2:18045541-18045560 | None:intergenic | 20.0% |
| !! | TAATGATATTTATCCCATTA+AGG | + | chr8.2:18046139-18046158 | None:intergenic | 20.0% |
| !! | TGTGTTTATAAAAATCATCA+GGG | - | chr8.2:18045951-18045970 | MS.gene51040:intron | 20.0% |
| !!! | AGATTGGTTTTAGATTATTT+GGG | - | chr8.2:18045263-18045282 | MS.gene51040:intron | 20.0% |
| !!! | TAATTTTATCAAATCATTGC+CGG | + | chr8.2:18046209-18046228 | None:intergenic | 20.0% |
| !!! | TTTGTTGGTTTAATATTTGA+TGG | + | chr8.2:18046614-18046633 | None:intergenic | 20.0% |
| ! | AAAACCAATCTCTTATTCTT+CGG | + | chr8.2:18045254-18045273 | None:intergenic | 25.0% |
| ! | AAGAAGGAATGTGATTATTA+AGG | - | chr8.2:18045295-18045314 | MS.gene51040:intron | 25.0% |
| ! | ATGTTAAAAGATGGTGATAA+TGG | + | chr8.2:18045227-18045246 | None:intergenic | 25.0% |
| ! | GTGTGTTTATAAAAATCATC+AGG | - | chr8.2:18045950-18045969 | MS.gene51040:intron | 25.0% |
| ! | GTGTTTATAAAAATCATCAG+GGG | - | chr8.2:18045952-18045971 | MS.gene51040:intron | 25.0% |
| ! | TAAACACACATCAAAACAAA+AGG | + | chr8.2:18045939-18045958 | None:intergenic | 25.0% |
| ! | TAATAAGTATATCCATCTTG+TGG | + | chr8.2:18045594-18045613 | None:intergenic | 25.0% |
| ! | TTTAAATTATCTCCACAAGA+TGG | - | chr8.2:18045579-18045598 | MS.gene51040:intron | 25.0% |
| ! | TTTCATAAAATATGCTCTTG+TGG | + | chr8.2:18045693-18045712 | None:intergenic | 25.0% |
| !! | AATAACTTCTCATTTGAAAC+TGG | + | chr8.2:18045769-18045788 | None:intergenic | 25.0% |
| !! | GAGTACTTGTCAATAATTTT+TGG | - | chr8.2:18045883-18045902 | MS.gene51040:CDS | 25.0% |
| !! | TTAGATTATTTGGGTTTGAA+AGG | - | chr8.2:18045272-18045291 | MS.gene51040:intron | 25.0% |
| !!! | AACAAAAGCATTTAAGTAGT+AGG | + | chr8.2:18046330-18046349 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTTATACCGTTG+TGG | + | chr8.2:18045488-18045507 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTTAGGCCTTAAT+GGG | - | chr8.2:18046123-18046142 | MS.gene51040:intron | 25.0% |
| !!! | GAGATTGGTTTTAGATTATT+TGG | - | chr8.2:18045262-18045281 | MS.gene51040:intron | 25.0% |
| !!! | TATTTCTTTTTAGGCCTTAA+TGG | - | chr8.2:18046122-18046141 | MS.gene51040:intron | 25.0% |
| AACATTGAAGCAAAAATACC+TGG | + | chr8.2:18046556-18046575 | None:intergenic | 30.0% | |
| ACATTGAAGCAAAAATACCT+GGG | + | chr8.2:18046555-18046574 | None:intergenic | 30.0% | |
| ATAGTAGTAATAGTAGTACC+CGG | + | chr8.2:18046105-18046124 | None:intergenic | 30.0% | |
| ATGTCTTCTGTAATTGTTTC+CGG | - | chr8.2:18045167-18045186 | MS.gene51040:CDS | 30.0% | |
| ATTACTATTCTATGCCACAA+CGG | - | chr8.2:18045471-18045490 | MS.gene51040:CDS | 30.0% | |
| ! | CACGATATCACAAATTTTGT+TGG | + | chr8.2:18046629-18046648 | None:intergenic | 30.0% |
| ! | TTCGGTTTGATGTTAAAAGA+TGG | + | chr8.2:18045236-18045255 | None:intergenic | 30.0% |
| !!! | GTTTTGGGATTTGCAATATT+TGG | - | chr8.2:18046454-18046473 | MS.gene51040:intron | 30.0% |
| AAAAAATAGGAACCTGCAGA+AGG | + | chr8.2:18045410-18045429 | None:intergenic | 35.0% | |
| ACAGCATCAATGAAAAGCAA+TGG | + | chr8.2:18046666-18046685 | None:intergenic | 35.0% | |
| ACTTCTGCATAATCACACTT+AGG | + | chr8.2:18046393-18046412 | None:intergenic | 35.0% | |
| AGTTTCAACAGTTGAGTTTC+TGG | - | chr8.2:18046688-18046707 | MS.gene51040:CDS | 35.0% | |
| ATTGAAGCAAAAATACCTGG+GGG | + | chr8.2:18046553-18046572 | None:intergenic | 35.0% | |
| CAAACCGAAGAATAAGAGAT+TGG | - | chr8.2:18045247-18045266 | MS.gene51040:CDS | 35.0% | |
| CATAAATTTGGTACTACCAC+CGG | + | chr8.2:18045189-18045208 | None:intergenic | 35.0% | |
| CATTGAAGCAAAAATACCTG+GGG | + | chr8.2:18046554-18046573 | None:intergenic | 35.0% | |
| GATCAGTTATTGACACCAAA+AGG | - | chr8.2:18046007-18046026 | MS.gene51040:intron | 35.0% | |
| GCATATCAATGTTGTGATGA+TGG | + | chr8.2:18045824-18045843 | None:intergenic | 35.0% | |
| TAGTAGTAATAGTAGTACCC+GGG | + | chr8.2:18046104-18046123 | None:intergenic | 35.0% | |
| TGACAACGGTACCATAAATT+TGG | + | chr8.2:18045201-18045220 | None:intergenic | 35.0% | |
| ! | ATTTGGGTTTGAAAGGAAGA+AGG | - | chr8.2:18045279-18045298 | MS.gene51040:intron | 35.0% |
| ! | GCAGAAGTACAGTATGTTTA+TGG | - | chr8.2:18046405-18046424 | MS.gene51040:intron | 35.0% |
| ! | TTCTGGTATGTTTTGTATCC+CGG | - | chr8.2:18046705-18046724 | MS.gene51040:CDS | 35.0% |
| !! | GGTGATAATGGTAATGACAA+CGG | + | chr8.2:18045215-18045234 | None:intergenic | 35.0% |
| AATGGCCATATTGGGAAAGA+TGG | - | chr8.2:18045985-18046004 | MS.gene51040:intron | 40.0% | |
| AATGTCACTGAAGGAATGAG+TGG | + | chr8.2:18045381-18045400 | None:intergenic | 40.0% | |
| AGTATGTTTATGGCCCAAGT+AGG | - | chr8.2:18046415-18046434 | MS.gene51040:intron | 40.0% | |
| ATTCCTTCAGTGACATTCTC+TGG | - | chr8.2:18045384-18045403 | MS.gene51040:CDS | 40.0% | |
| ATTTGCAGCAATGGCCATAT+TGG | - | chr8.2:18045976-18045995 | MS.gene51040:intron | 40.0% | |
| CGGTGGTAGTACCAAATTTA+TGG | - | chr8.2:18045187-18045206 | MS.gene51040:CDS | 40.0% | |
| CTGATCCATCTTTCCCAATA+TGG | + | chr8.2:18045993-18046012 | None:intergenic | 40.0% | |
| GAAAAGCAATGGCATGCTTA+CGG | + | chr8.2:18046655-18046674 | None:intergenic | 40.0% | |
| GAATGAGTGGAAGAGGATTT+GGG | + | chr8.2:18045368-18045387 | None:intergenic | 40.0% | |
| GGATTTGCAATATTTGGACC+TGG | - | chr8.2:18046460-18046479 | MS.gene51040:intron | 40.0% | |
| TCAATCACAGTTGCACCATT+AGG | - | chr8.2:18046034-18046053 | MS.gene51040:intron | 40.0% | |
| TCTTCTGTAATTGTTTCCGG+TGG | - | chr8.2:18045170-18045189 | MS.gene51040:CDS | 40.0% | |
| TGCAAATCCCAAAACACCAA+TGG | + | chr8.2:18046449-18046468 | None:intergenic | 40.0% | |
| TTGAAGCAAAAATACCTGGG+GGG | + | chr8.2:18046552-18046571 | None:intergenic | 40.0% | |
| TTTGCAGCAATGGCCATATT+GGG | - | chr8.2:18045977-18045996 | MS.gene51040:intron | 40.0% | |
| ! | ACTGTGATTGAGAGTCCTTT+TGG | + | chr8.2:18046025-18046044 | None:intergenic | 40.0% |
| ! | TCTGGTATGTTTTGTATCCC+GGG | - | chr8.2:18046706-18046725 | MS.gene51040:CDS | 40.0% |
| AATGGCTGCACAACCTACTT+GGG | + | chr8.2:18046431-18046450 | None:intergenic | 45.0% | |
| ACTGAAGGAATGAGTGGAAG+AGG | + | chr8.2:18045375-18045394 | None:intergenic | 45.0% | |
| CGACACTGATACATTGACAC+CGG | - | chr8.2:18046187-18046206 | MS.gene51040:intron | 45.0% | |
| GGAATGAGTGGAAGAGGATT+TGG | + | chr8.2:18045369-18045388 | None:intergenic | 45.0% | |
| ! | CTGGTATGTTTTGTATCCCG+GGG | - | chr8.2:18046707-18046726 | MS.gene51040:CDS | 45.0% |
| ! | TATTAAGGCATCAAGCGACG+TGG | - | chr8.2:18045310-18045329 | MS.gene51040:intron | 45.0% |
| !! | TGTGCAGCCATTGGTGTTTT+GGG | - | chr8.2:18046439-18046458 | MS.gene51040:intron | 45.0% |
| !! | TTGTGCAGCCATTGGTGTTT+TGG | - | chr8.2:18046438-18046457 | MS.gene51040:intron | 45.0% |
| AATAGTAGTACCCGGGCAGA+AGG | + | chr8.2:18046097-18046116 | None:intergenic | 50.0% | |
| AGAGCAGACACTGCTCCTAA+TGG | + | chr8.2:18046052-18046071 | None:intergenic | 50.0% | |
| AGCAGCAACACTAGCACTCT+TGG | + | chr8.2:18046494-18046513 | None:intergenic | 50.0% | |
| AGGCCAGAGAATGTCACTGA+AGG | + | chr8.2:18045390-18045409 | None:intergenic | 50.0% | |
| AGGTTTCCAGTTCTCCCAGA+TGG | + | chr8.2:18045345-18045364 | None:intergenic | 50.0% | |
| ATAGTAGTACCCGGGCAGAA+GGG | + | chr8.2:18046096-18046115 | None:intergenic | 50.0% | |
| CAAGTAGGTTGTGCAGCCAT+TGG | - | chr8.2:18046430-18046449 | MS.gene51040:intron | 50.0% | |
| CAATGGCTGCACAACCTACT+TGG | + | chr8.2:18046432-18046451 | None:intergenic | 50.0% | |
| TGAGTGGAAGAGGATTTGGG+AGG | + | chr8.2:18045365-18045384 | None:intergenic | 50.0% | |
| TTCCAGTTCTCCCAGATGGA+GGG | + | chr8.2:18045341-18045360 | None:intergenic | 50.0% | |
| TTTCCAGTTCTCCCAGATGG+AGG | + | chr8.2:18045342-18045361 | None:intergenic | 50.0% | |
| !! | ATCAGGGGCATTTGCAGCAA+TGG | - | chr8.2:18045967-18045986 | MS.gene51040:intron | 50.0% |
| GCACTCTTGGCTAGCAATCC+AGG | + | chr8.2:18046481-18046500 | None:intergenic | 55.0% | |
| TAGAATGCATCCTGCTGCCC+CGG | + | chr8.2:18046727-18046746 | None:intergenic | 55.0% | |
| TAGTAGTACCCGGGCAGAAG+GGG | + | chr8.2:18046095-18046114 | None:intergenic | 55.0% | |
| ! | GACATTCTCTGGCCTTCTGC+AGG | - | chr8.2:18045395-18045414 | MS.gene51040:CDS | 55.0% |
| AGAATGCATCCTGCTGCCCC+GGG | + | chr8.2:18046726-18046745 | None:intergenic | 60.0% | |
| CACCCTCCATCTGGGAGAAC+TGG | - | chr8.2:18045336-18045355 | MS.gene51040:intron | 60.0% | |
| GTTCTCCCAGATGGAGGGTG+AGG | + | chr8.2:18045336-18045355 | None:intergenic | 60.0% | |
| ! | ACTGACTCTGTTCACCCCCC+AGG | - | chr8.2:18046535-18046554 | MS.gene51040:CDS | 60.0% |
| ! | GTTTTGTATCCCGGGGCAGC+AGG | - | chr8.2:18046714-18046733 | MS.gene51040:CDS | 60.0% |
| ACGTGGCCTCACCCTCCATC+TGG | - | chr8.2:18045327-18045346 | MS.gene51040:intron | 65.0% | |
| CGTGGCCTCACCCTCCATCT+GGG | - | chr8.2:18045328-18045347 | MS.gene51040:intron | 65.0% | |
| ACCCGGGCAGAAGGGGCTGA+GGG | + | chr8.2:18046088-18046107 | None:intergenic | 70.0% | |
| ACCCTCAGCCCCTTCTGCCC+GGG | - | chr8.2:18046084-18046103 | MS.gene51040:intron | 70.0% | |
| CACCCTCAGCCCCTTCTGCC+CGG | - | chr8.2:18046083-18046102 | MS.gene51040:intron | 70.0% | |
| GGCAGAAGGGGCTGAGGGTG+AGG | + | chr8.2:18046083-18046102 | None:intergenic | 70.0% | |
| TACCCGGGCAGAAGGGGCTG+AGG | + | chr8.2:18046089-18046108 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18045167 | 18046758 | 18045167 | ID=MS.gene51040 |
| chr8.2 | mRNA | 18045167 | 18046758 | 18045167 | ID=MS.gene51040.t1;Parent=MS.gene51040 |
| chr8.2 | exon | 18046509 | 18046758 | 18046509 | ID=MS.gene51040.t1.exon1;Parent=MS.gene51040.t1 |
| chr8.2 | CDS | 18046509 | 18046758 | 18046509 | ID=cds.MS.gene51040.t1;Parent=MS.gene51040.t1 |
| chr8.2 | exon | 18045820 | 18045953 | 18045820 | ID=MS.gene51040.t1.exon2;Parent=MS.gene51040.t1 |
| chr8.2 | CDS | 18045820 | 18045953 | 18045820 | ID=cds.MS.gene51040.t1;Parent=MS.gene51040.t1 |
| chr8.2 | exon | 18045369 | 18045516 | 18045369 | ID=MS.gene51040.t1.exon3;Parent=MS.gene51040.t1 |
| chr8.2 | CDS | 18045369 | 18045516 | 18045369 | ID=cds.MS.gene51040.t1;Parent=MS.gene51040.t1 |
| chr8.2 | exon | 18045167 | 18045273 | 18045167 | ID=MS.gene51040.t1.exon4;Parent=MS.gene51040.t1 |
| chr8.2 | CDS | 18045167 | 18045273 | 18045167 | ID=cds.MS.gene51040.t1;Parent=MS.gene51040.t1 |
| Gene Sequence |
| Protein sequence |
