Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51072.t1 | XP_003608984.1 | 90.3 | 216 | 18 | 1 | 4 | 216 | 1 | 216 | 1.50E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51072.t1 | G7JPV2 | 90.3 | 216 | 18 | 1 | 4 | 216 | 1 | 216 | 1.1e-98 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene51072 | -0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene049824 | MS.gene51072 | -0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene51072 | -0.819749 | 9.86E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene51072 | -0.801943 | 7.09E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene51072 | -0.827733 | 1.33E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene51072 | -0.802639 | 5.10E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene51072 | -0.831822 | 1.34E-55 | -1.69E-46 |
| MS.gene054142 | MS.gene51072 | -0.810174 | 1.31E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene51072 | -0.825906 | 3.63E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene51072 | -0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene51072 | -0.857573 | 1.49E-62 | -1.69E-46 |
| MS.gene057684 | MS.gene51072 | 0.8057 | 1.18E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene51072 | 0.862016 | 6.83E-64 | -1.69E-46 |
| MS.gene060525 | MS.gene51072 | -0.824573 | 7.50E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51071 | MS.gene51072 | PPI |
| MS.gene51041 | MS.gene51072 | PPI |
| MS.gene033167 | MS.gene51072 | PPI |
| MS.gene51040 | MS.gene51072 | PPI |
| MS.gene51038 | MS.gene51072 | PPI |
| MS.gene001161 | MS.gene51072 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51072.t1 | MTR_4g107630 | 90.278 | 216 | 18 | 1 | 4 | 216 | 1 | 216 | 1.69e-136 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51072.t1 | AT5G62720 | 56.322 | 174 | 73 | 2 | 45 | 216 | 58 | 230 | 5.51e-67 | 206 |
| MS.gene51072.t1 | AT3G47980 | 62.577 | 163 | 61 | 0 | 54 | 216 | 77 | 239 | 1.58e-65 | 203 |
| MS.gene51072.t1 | AT5G62720 | 55.072 | 138 | 59 | 2 | 45 | 180 | 58 | 194 | 2.28e-46 | 152 |
Find 62 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTCAACAGTTGAGTTTC+TGG | 0.125934 | 8.2:-18073951 | MS.gene51072:CDS |
| CGGTGGTAGTACCAAATTTA+TGG | 0.147539 | 8.2:-18075452 | MS.gene51072:CDS |
| GCAGAAGTACAGTATGTTTA+TGG | 0.153489 | 8.2:-18074234 | MS.gene51072:intron |
| ATGTCTTCTGTAATTGTTTC+CGG | 0.215984 | 8.2:-18075472 | MS.gene51072:CDS |
| GGAATGAGTGGAAGAGGATT+TGG | 0.281069 | 8.2:+18075273 | None:intergenic |
| ATTTGCAGCAATGGCCATAT+TGG | 0.282337 | 8.2:-18074663 | MS.gene51072:CDS |
| TTGTGCAGCCATTGGTGTTT+TGG | 0.288656 | 8.2:-18074201 | MS.gene51072:CDS |
| CTGATCCATCTTTCCCAATA+TGG | 0.299857 | 8.2:+18074649 | None:intergenic |
| ACGTGGCCTCACCCTCCATC+TGG | 0.304995 | 8.2:-18075312 | MS.gene51072:CDS |
| TGACAACGGTACCATAAATT+TGG | 0.325955 | 8.2:+18075441 | None:intergenic |
| AAGAAGGAATGTGATTATTA+AGG | 0.343485 | 8.2:-18075344 | MS.gene51072:CDS |
| CAATGGCTGCACAACCTACT+TGG | 0.345485 | 8.2:+18074210 | None:intergenic |
| TTTGCAGCAATGGCCATATT+GGG | 0.365439 | 8.2:-18074662 | MS.gene51072:CDS |
| CACCCTCAGCCCCTTCTGCC+CGG | 0.367068 | 8.2:-18074556 | MS.gene51072:CDS |
| CACCCTCCATCTGGGAGAAC+TGG | 0.369226 | 8.2:-18075303 | MS.gene51072:CDS |
| GAATGAGTGGAAGAGGATTT+GGG | 0.381725 | 8.2:+18075274 | None:intergenic |
| AAAACCAATCTCTTATTCTT+CGG | 0.383257 | 8.2:+18075388 | None:intergenic |
| ATTCCTTCAGTGACATTCTC+TGG | 0.388063 | 8.2:-18075255 | MS.gene51072:CDS |
| GACATTCTCTGGCCTTCTGC+AGG | 0.394844 | 8.2:-18075244 | MS.gene51072:intron |
| AAACAATTACAGAAGACATT+TGG | 0.403022 | 8.2:+18075476 | None:intergenic |
| ATGTTAAAAGATGGTGATAA+TGG | 0.407105 | 8.2:+18075415 | None:intergenic |
| GGCAGAAGGGGCTGAGGGTG+AGG | 0.416383 | 8.2:+18074559 | None:intergenic |
| CAAACCGAAGAATAAGAGAT+TGG | 0.426795 | 8.2:-18075392 | MS.gene51072:CDS |
| TCAATCACAGTTGCACCATT+AGG | 0.429248 | 8.2:-18074605 | MS.gene51072:CDS |
| ACTGTGATTGAGAGTCCTTT+TGG | 0.443290 | 8.2:+18074617 | None:intergenic |
| GCACTCTTGGCTAGCAATCC+AGG | 0.449810 | 8.2:+18074161 | None:intergenic |
| TACCCGGGCAGAAGGGGCTG+AGG | 0.452991 | 8.2:+18074553 | None:intergenic |
| AGCAGCAACACTAGCACTCT+TGG | 0.457034 | 8.2:+18074148 | None:intergenic |
| TAGAATGCATCCTGCTGCCC+CGG | 0.459572 | 8.2:+18073915 | None:intergenic |
| ACCCTCAGCCCCTTCTGCCC+GGG | 0.469153 | 8.2:-18074555 | MS.gene51072:intron |
| ATTTGGGTTTGAAAGGAAGA+AGG | 0.469818 | 8.2:-18075360 | MS.gene51072:CDS |
| TTCGGTTTGATGTTAAAAGA+TGG | 0.478176 | 8.2:+18075406 | None:intergenic |
| CAAGTAGGTTGTGCAGCCAT+TGG | 0.487463 | 8.2:-18074209 | MS.gene51072:CDS |
| GATCAGTTATTGACACCAAA+AGG | 0.488111 | 8.2:-18074632 | MS.gene51072:CDS |
| GAAAAGCAATGGCATGCTTA+CGG | 0.488854 | 8.2:+18073987 | None:intergenic |
| AGAGCAGACACTGCTCCTAA+TGG | 0.490696 | 8.2:+18074590 | None:intergenic |
| ATCAGGGGCATTTGCAGCAA+TGG | 0.492588 | 8.2:-18074672 | MS.gene51072:intron |
| CATAAATTTGGTACTACCAC+CGG | 0.501343 | 8.2:+18075453 | None:intergenic |
| AGGTTTCCAGTTCTCCCAGA+TGG | 0.502717 | 8.2:+18075297 | None:intergenic |
| TTAGATTATTTGGGTTTGAA+AGG | 0.508877 | 8.2:-18075367 | MS.gene51072:CDS |
| CGTGGCCTCACCCTCCATCT+GGG | 0.513595 | 8.2:-18075311 | MS.gene51072:CDS |
| TTTCCAGTTCTCCCAGATGG+AGG | 0.521215 | 8.2:+18075300 | None:intergenic |
| AATGGCCATATTGGGAAAGA+TGG | 0.522770 | 8.2:-18074654 | MS.gene51072:CDS |
| ACTGAAGGAATGAGTGGAAG+AGG | 0.523502 | 8.2:+18075267 | None:intergenic |
| AATAGTAGTACCCGGGCAGA+AGG | 0.525314 | 8.2:+18074545 | None:intergenic |
| AATGGCTGCACAACCTACTT+GGG | 0.529946 | 8.2:+18074211 | None:intergenic |
| TAGTAGTACCCGGGCAGAAG+GGG | 0.552816 | 8.2:+18074547 | None:intergenic |
| GTTCTCCCAGATGGAGGGTG+AGG | 0.554854 | 8.2:+18075306 | None:intergenic |
| GGATTTGCAATATTTGGACC+TGG | 0.557125 | 8.2:-18074179 | MS.gene51072:CDS |
| TTCCAGTTCTCCCAGATGGA+GGG | 0.561076 | 8.2:+18075301 | None:intergenic |
| ATAGTAGTACCCGGGCAGAA+GGG | 0.569371 | 8.2:+18074546 | None:intergenic |
| AGTATGTTTATGGCCCAAGT+AGG | 0.569674 | 8.2:-18074224 | MS.gene51072:CDS |
| AATGTCACTGAAGGAATGAG+TGG | 0.582208 | 8.2:+18075261 | None:intergenic |
| AGAATGCATCCTGCTGCCCC+GGG | 0.589508 | 8.2:+18073916 | None:intergenic |
| ACCCGGGCAGAAGGGGCTGA+GGG | 0.592231 | 8.2:+18074554 | None:intergenic |
| ACAGCATCAATGAAAAGCAA+TGG | 0.607570 | 8.2:+18073976 | None:intergenic |
| TGCAAATCCCAAAACACCAA+TGG | 0.618790 | 8.2:+18074193 | None:intergenic |
| AGGCCAGAGAATGTCACTGA+AGG | 0.622535 | 8.2:+18075252 | None:intergenic |
| TCTTCTGTAATTGTTTCCGG+TGG | 0.651325 | 8.2:-18075469 | MS.gene51072:CDS |
| TGAGTGGAAGAGGATTTGGG+AGG | 0.662152 | 8.2:+18075277 | None:intergenic |
| TATTAAGGCATCAAGCGACG+TGG | 0.697251 | 8.2:-18075329 | MS.gene51072:CDS |
| GGTGATAATGGTAATGACAA+CGG | 0.705821 | 8.2:+18075427 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGAATAATAAATAAAAAAT+AGG | + | chr8.2:18074168-18074187 | None:intergenic | 10.0% |
| !! | GATAAATATCATTAATACAA+TGG | - | chr8.2:18074890-18074909 | MS.gene51072:intron | 15.0% |
| !! | TAAATTCATCTTTCAAATAA+AGG | + | chr8.2:18074190-18074209 | None:intergenic | 15.0% |
| !!! | AAAAAACTTTTTAAATGTGA+AGG | - | chr8.2:18074244-18074263 | MS.gene51072:intron | 15.0% |
| !!! | ATTATAATACTATTTCTTTG+AGG | + | chr8.2:18074411-18074430 | None:intergenic | 15.0% |
| !!! | TATTACTACTATTTCTTTTT+AGG | - | chr8.2:18074858-18074877 | MS.gene51072:intron | 15.0% |
| !! | ACATAATAGTGAGATAAAAT+TGG | + | chr8.2:18074286-18074305 | None:intergenic | 20.0% |
| !! | TAATGATATTTATCCCATTA+AGG | + | chr8.2:18074884-18074903 | None:intergenic | 20.0% |
| !! | TGTGTTTATAAAAATCATCA+GGG | - | chr8.2:18074696-18074715 | MS.gene51072:intron | 20.0% |
| !!! | AGATTGGTTTTAGATTATTT+GGG | - | chr8.2:18074008-18074027 | MS.gene51072:intron | 20.0% |
| !!! | TAATTTTATCAAATCATTGC+CGG | + | chr8.2:18074954-18074973 | None:intergenic | 20.0% |
| !!! | TTTGTTGGTTTAATATTTGA+TGG | + | chr8.2:18075359-18075378 | None:intergenic | 20.0% |
| ! | AAAACCAATCTCTTATTCTT+CGG | + | chr8.2:18073999-18074018 | None:intergenic | 25.0% |
| ! | AAACAATTACAGAAGACATT+TGG | + | chr8.2:18073911-18073930 | None:intergenic | 25.0% |
| ! | AAGAAGGAATGTGATTATTA+AGG | - | chr8.2:18074040-18074059 | MS.gene51072:intron | 25.0% |
| ! | ATGTTAAAAGATGGTGATAA+TGG | + | chr8.2:18073972-18073991 | None:intergenic | 25.0% |
| ! | GTGTGTTTATAAAAATCATC+AGG | - | chr8.2:18074695-18074714 | MS.gene51072:intron | 25.0% |
| ! | GTGTTTATAAAAATCATCAG+GGG | - | chr8.2:18074697-18074716 | MS.gene51072:intron | 25.0% |
| ! | TAAACACACATCAAAACAAA+AGG | + | chr8.2:18074684-18074703 | None:intergenic | 25.0% |
| ! | TAATAAGTATATCCATCTTG+TGG | + | chr8.2:18074339-18074358 | None:intergenic | 25.0% |
| ! | TTTAAATTATCTCCACAAGA+TGG | - | chr8.2:18074324-18074343 | MS.gene51072:intron | 25.0% |
| ! | TTTCATAAAATATGCTCTTG+TGG | + | chr8.2:18074438-18074457 | None:intergenic | 25.0% |
| !! | AATAACTTCTCATTTGAAAC+TGG | + | chr8.2:18074514-18074533 | None:intergenic | 25.0% |
| !! | GAGTACTTGTCAATAATTTT+TGG | - | chr8.2:18074628-18074647 | MS.gene51072:CDS | 25.0% |
| !! | TTAGATTATTTGGGTTTGAA+AGG | - | chr8.2:18074017-18074036 | MS.gene51072:intron | 25.0% |
| !!! | AACAAAAGCATTTAAGTAGT+AGG | + | chr8.2:18075075-18075094 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTTATACCGTTG+TGG | + | chr8.2:18074233-18074252 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTTAGGCCTTAAT+GGG | - | chr8.2:18074868-18074887 | MS.gene51072:intron | 25.0% |
| !!! | GAGATTGGTTTTAGATTATT+TGG | - | chr8.2:18074007-18074026 | MS.gene51072:intron | 25.0% |
| !!! | TATTTCTTTTTAGGCCTTAA+TGG | - | chr8.2:18074867-18074886 | MS.gene51072:intron | 25.0% |
| AACATTGAAGCAAAAATACC+TGG | + | chr8.2:18075301-18075320 | None:intergenic | 30.0% | |
| ACATTGAAGCAAAAATACCT+GGG | + | chr8.2:18075300-18075319 | None:intergenic | 30.0% | |
| ATAGTAGTAATAGTAGTACC+CGG | + | chr8.2:18074850-18074869 | None:intergenic | 30.0% | |
| ATGTCTTCTGTAATTGTTTC+CGG | - | chr8.2:18073912-18073931 | MS.gene51072:CDS | 30.0% | |
| ATTACTATTCTATGCCACAA+CGG | - | chr8.2:18074216-18074235 | MS.gene51072:CDS | 30.0% | |
| ! | CACGATATCACAAATTTTGT+TGG | + | chr8.2:18075374-18075393 | None:intergenic | 30.0% |
| ! | TTCGGTTTGATGTTAAAAGA+TGG | + | chr8.2:18073981-18074000 | None:intergenic | 30.0% |
| !!! | GTTTTGGGATTTGCAATATT+TGG | - | chr8.2:18075199-18075218 | MS.gene51072:intron | 30.0% |
| AAAAAATAGGAACCTGCAGA+AGG | + | chr8.2:18074155-18074174 | None:intergenic | 35.0% | |
| ACAGCATCAATGAAAAGCAA+TGG | + | chr8.2:18075411-18075430 | None:intergenic | 35.0% | |
| ACTTCTGCATAATCACACTT+AGG | + | chr8.2:18075138-18075157 | None:intergenic | 35.0% | |
| AGTTTCAACAGTTGAGTTTC+TGG | - | chr8.2:18075433-18075452 | MS.gene51072:CDS | 35.0% | |
| ATTGAAGCAAAAATACCTGG+GGG | + | chr8.2:18075298-18075317 | None:intergenic | 35.0% | |
| CAAACCGAAGAATAAGAGAT+TGG | - | chr8.2:18073992-18074011 | MS.gene51072:intron | 35.0% | |
| CATAAATTTGGTACTACCAC+CGG | + | chr8.2:18073934-18073953 | None:intergenic | 35.0% | |
| CATTGAAGCAAAAATACCTG+GGG | + | chr8.2:18075299-18075318 | None:intergenic | 35.0% | |
| GATCAGTTATTGACACCAAA+AGG | - | chr8.2:18074752-18074771 | MS.gene51072:intron | 35.0% | |
| GCATATCAATGTTGTGATGA+TGG | + | chr8.2:18074569-18074588 | None:intergenic | 35.0% | |
| TAGTAGTAATAGTAGTACCC+GGG | + | chr8.2:18074849-18074868 | None:intergenic | 35.0% | |
| TGACAACGGTACCATAAATT+TGG | + | chr8.2:18073946-18073965 | None:intergenic | 35.0% | |
| ! | ATTTGGGTTTGAAAGGAAGA+AGG | - | chr8.2:18074024-18074043 | MS.gene51072:intron | 35.0% |
| ! | GCAGAAGTACAGTATGTTTA+TGG | - | chr8.2:18075150-18075169 | MS.gene51072:intron | 35.0% |
| ! | TTCTGGTATGTTTTGTATCC+CGG | - | chr8.2:18075450-18075469 | MS.gene51072:CDS | 35.0% |
| !! | GGTGATAATGGTAATGACAA+CGG | + | chr8.2:18073960-18073979 | None:intergenic | 35.0% |
| AATGGCCATATTGGGAAAGA+TGG | - | chr8.2:18074730-18074749 | MS.gene51072:intron | 40.0% | |
| AATGTCACTGAAGGAATGAG+TGG | + | chr8.2:18074126-18074145 | None:intergenic | 40.0% | |
| AGTATGTTTATGGCCCAAGT+AGG | - | chr8.2:18075160-18075179 | MS.gene51072:intron | 40.0% | |
| ATTCCTTCAGTGACATTCTC+TGG | - | chr8.2:18074129-18074148 | MS.gene51072:CDS | 40.0% | |
| ATTTGCAGCAATGGCCATAT+TGG | - | chr8.2:18074721-18074740 | MS.gene51072:intron | 40.0% | |
| CGGTGGTAGTACCAAATTTA+TGG | - | chr8.2:18073932-18073951 | MS.gene51072:CDS | 40.0% | |
| CTGATCCATCTTTCCCAATA+TGG | + | chr8.2:18074738-18074757 | None:intergenic | 40.0% | |
| GAAAAGCAATGGCATGCTTA+CGG | + | chr8.2:18075400-18075419 | None:intergenic | 40.0% | |
| GAATGAGTGGAAGAGGATTT+GGG | + | chr8.2:18074113-18074132 | None:intergenic | 40.0% | |
| GGATTTGCAATATTTGGACC+TGG | - | chr8.2:18075205-18075224 | MS.gene51072:intron | 40.0% | |
| TCAATCACAGTTGCACCATT+AGG | - | chr8.2:18074779-18074798 | MS.gene51072:intron | 40.0% | |
| TCTTCTGTAATTGTTTCCGG+TGG | - | chr8.2:18073915-18073934 | MS.gene51072:CDS | 40.0% | |
| TGCAAATCCCAAAACACCAA+TGG | + | chr8.2:18075194-18075213 | None:intergenic | 40.0% | |
| TTGAAGCAAAAATACCTGGG+GGG | + | chr8.2:18075297-18075316 | None:intergenic | 40.0% | |
| TTTGCAGCAATGGCCATATT+GGG | - | chr8.2:18074722-18074741 | MS.gene51072:intron | 40.0% | |
| ! | ACTGTGATTGAGAGTCCTTT+TGG | + | chr8.2:18074770-18074789 | None:intergenic | 40.0% |
| ! | TCTGGTATGTTTTGTATCCC+GGG | - | chr8.2:18075451-18075470 | MS.gene51072:CDS | 40.0% |
| AATGGCTGCACAACCTACTT+GGG | + | chr8.2:18075176-18075195 | None:intergenic | 45.0% | |
| ACTGAAGGAATGAGTGGAAG+AGG | + | chr8.2:18074120-18074139 | None:intergenic | 45.0% | |
| CGACACTGATACATTGACAC+CGG | - | chr8.2:18074932-18074951 | MS.gene51072:intron | 45.0% | |
| GGAATGAGTGGAAGAGGATT+TGG | + | chr8.2:18074114-18074133 | None:intergenic | 45.0% | |
| ! | CTGGTATGTTTTGTATCCCG+GGG | - | chr8.2:18075452-18075471 | MS.gene51072:CDS | 45.0% |
| ! | TATTAAGGCATCAAGCGACG+TGG | - | chr8.2:18074055-18074074 | MS.gene51072:intron | 45.0% |
| !! | TGTGCAGCCATTGGTGTTTT+GGG | - | chr8.2:18075184-18075203 | MS.gene51072:intron | 45.0% |
| !! | TTGTGCAGCCATTGGTGTTT+TGG | - | chr8.2:18075183-18075202 | MS.gene51072:intron | 45.0% |
| AATAGTAGTACCCGGGCAGA+AGG | + | chr8.2:18074842-18074861 | None:intergenic | 50.0% | |
| AGAGCAGACACTGCTCCTAA+TGG | + | chr8.2:18074797-18074816 | None:intergenic | 50.0% | |
| AGCAGCAACACTAGCACTCT+TGG | + | chr8.2:18075239-18075258 | None:intergenic | 50.0% | |
| AGGCCAGAGAATGTCACTGA+AGG | + | chr8.2:18074135-18074154 | None:intergenic | 50.0% | |
| AGGTTTCCAGTTCTCCCAGA+TGG | + | chr8.2:18074090-18074109 | None:intergenic | 50.0% | |
| ATAGTAGTACCCGGGCAGAA+GGG | + | chr8.2:18074841-18074860 | None:intergenic | 50.0% | |
| CAAGTAGGTTGTGCAGCCAT+TGG | - | chr8.2:18075175-18075194 | MS.gene51072:intron | 50.0% | |
| CAATGGCTGCACAACCTACT+TGG | + | chr8.2:18075177-18075196 | None:intergenic | 50.0% | |
| TGAGTGGAAGAGGATTTGGG+AGG | + | chr8.2:18074110-18074129 | None:intergenic | 50.0% | |
| TTCCAGTTCTCCCAGATGGA+GGG | + | chr8.2:18074086-18074105 | None:intergenic | 50.0% | |
| TTTCCAGTTCTCCCAGATGG+AGG | + | chr8.2:18074087-18074106 | None:intergenic | 50.0% | |
| !! | ATCAGGGGCATTTGCAGCAA+TGG | - | chr8.2:18074712-18074731 | MS.gene51072:intron | 50.0% |
| GCACTCTTGGCTAGCAATCC+AGG | + | chr8.2:18075226-18075245 | None:intergenic | 55.0% | |
| TAGAATGCATCCTGCTGCCC+CGG | + | chr8.2:18075472-18075491 | None:intergenic | 55.0% | |
| TAGTAGTACCCGGGCAGAAG+GGG | + | chr8.2:18074840-18074859 | None:intergenic | 55.0% | |
| ! | GACATTCTCTGGCCTTCTGC+AGG | - | chr8.2:18074140-18074159 | MS.gene51072:CDS | 55.0% |
| AGAATGCATCCTGCTGCCCC+GGG | + | chr8.2:18075471-18075490 | None:intergenic | 60.0% | |
| CACCCTCCATCTGGGAGAAC+TGG | - | chr8.2:18074081-18074100 | MS.gene51072:intron | 60.0% | |
| GTTCTCCCAGATGGAGGGTG+AGG | + | chr8.2:18074081-18074100 | None:intergenic | 60.0% | |
| ! | ACTGACTCTGTTCACCCCCC+AGG | - | chr8.2:18075280-18075299 | MS.gene51072:CDS | 60.0% |
| ! | GTTTTGTATCCCGGGGCAGC+AGG | - | chr8.2:18075459-18075478 | MS.gene51072:CDS | 60.0% |
| ACGTGGCCTCACCCTCCATC+TGG | - | chr8.2:18074072-18074091 | MS.gene51072:intron | 65.0% | |
| CGTGGCCTCACCCTCCATCT+GGG | - | chr8.2:18074073-18074092 | MS.gene51072:intron | 65.0% | |
| ACCCGGGCAGAAGGGGCTGA+GGG | + | chr8.2:18074833-18074852 | None:intergenic | 70.0% | |
| ACCCTCAGCCCCTTCTGCCC+GGG | - | chr8.2:18074829-18074848 | MS.gene51072:intron | 70.0% | |
| CACCCTCAGCCCCTTCTGCC+CGG | - | chr8.2:18074828-18074847 | MS.gene51072:intron | 70.0% | |
| GGCAGAAGGGGCTGAGGGTG+AGG | + | chr8.2:18074828-18074847 | None:intergenic | 70.0% | |
| TACCCGGGCAGAAGGGGCTG+AGG | + | chr8.2:18074834-18074853 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18073903 | 18075503 | 18073903 | ID=MS.gene51072 |
| chr8.2 | mRNA | 18073903 | 18075503 | 18073903 | ID=MS.gene51072.t1;Parent=MS.gene51072 |
| chr8.2 | exon | 18075245 | 18075503 | 18075245 | ID=MS.gene51072.t1.exon1;Parent=MS.gene51072.t1 |
| chr8.2 | CDS | 18075245 | 18075503 | 18075245 | ID=cds.MS.gene51072.t1;Parent=MS.gene51072.t1 |
| chr8.2 | exon | 18074556 | 18074689 | 18074556 | ID=MS.gene51072.t1.exon2;Parent=MS.gene51072.t1 |
| chr8.2 | CDS | 18074556 | 18074689 | 18074556 | ID=cds.MS.gene51072.t1;Parent=MS.gene51072.t1 |
| chr8.2 | exon | 18074105 | 18074252 | 18074105 | ID=MS.gene51072.t1.exon3;Parent=MS.gene51072.t1 |
| chr8.2 | CDS | 18074105 | 18074252 | 18074105 | ID=cds.MS.gene51072.t1;Parent=MS.gene51072.t1 |
| chr8.2 | exon | 18073903 | 18074009 | 18073903 | ID=MS.gene51072.t1.exon4;Parent=MS.gene51072.t1 |
| chr8.2 | CDS | 18073903 | 18074009 | 18073903 | ID=cds.MS.gene51072.t1;Parent=MS.gene51072.t1 |
| Gene Sequence |
| Protein sequence |
