AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51426

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 182 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATTGATCTTGCCGATTT+TGG 0.126247 2.2:+54239729 None:intergenic
CCCTCAACTTCTGTTCTAAA+AGG 0.206450 2.2:+54238506 None:intergenic
GATTCTCAGTTTCTATATTC+TGG 0.225407 2.2:-54239858 MS.gene51426:CDS
ACAAAACCGGGATTCTTAAT+AGG 0.234211 2.2:+54239681 None:intergenic
TGATCAAATATTTAATTCTT+TGG 0.234441 2.2:-54237236 MS.gene51426:CDS
TAATAGGGGACAAAAGTTTA+TGG 0.239442 2.2:+54239697 None:intergenic
GATTCTTCTTTGAATAATAA+AGG 0.253439 2.2:-54239294 MS.gene51426:CDS
GAGGTTGATGCTTATGAATT+TGG 0.255705 2.2:-54237271 MS.gene51426:CDS
GGATTGCTGCTCCTTGTTAA+TGG 0.259788 2.2:+54238670 None:intergenic
TAATGTAGTTGCAAGGCTTA+TGG 0.290220 2.2:-54239955 MS.gene51426:CDS
TTATGTTTCAATGATGATTC+TGG 0.299384 2.2:+54238334 None:intergenic
CCAATTACATTGTATCCTAT+TGG 0.304963 2.2:+54238547 None:intergenic
CCAATAGGATACAATGTAAT+TGG 0.307017 2.2:-54238547 MS.gene51426:CDS
CAACAATCCTGCTTATATAA+TGG 0.326959 2.2:-54239652 MS.gene51426:CDS
CAATGATGATTCTGGAAGAT+TGG 0.328218 2.2:+54238342 None:intergenic
AATCCAACCACTTTCCATAT+TGG 0.332576 2.2:+54237296 None:intergenic
TGAGAACATTAGAAGAATTC+TGG 0.343239 2.2:+54239103 None:intergenic
AATGTAGTTGCAAGGCTTAT+GGG 0.343622 2.2:-54239954 MS.gene51426:CDS
TCTAAAGTTAACCTCAATCT+AGG 0.348348 2.2:-54238445 MS.gene51426:CDS
CTCCCTTTCGGCTTTCCAAC+TGG 0.349402 2.2:+54237557 None:intergenic
CAAAACCGGGATTCTTAATA+GGG 0.350999 2.2:+54239682 None:intergenic
AAAAGTTTATGGTGTGTAAC+AGG 0.355362 2.2:+54239708 None:intergenic
TTTGCCTCCTTCCGGTTTCT+CGG 0.358423 2.2:-54239922 MS.gene51426:CDS
GGGATCTTCTAGCAATTTCA+TGG 0.358544 2.2:-54239814 MS.gene51426:CDS
TTAGATTCTTTGCCTCCTTC+CGG 0.359642 2.2:-54239930 MS.gene51426:CDS
ACGACTGGAGATTCCTCTTA+TGG 0.366120 2.2:-54238985 MS.gene51426:CDS
GTTGGCAAAAGATGTGTATA+AGG 0.368623 2.2:-54237386 MS.gene51426:CDS
AGATCAAGATATGTCGTTTA+CGG 0.368642 2.2:-54238407 MS.gene51426:CDS
AAGGATATGAGTAGCCAATA+TGG 0.377746 2.2:-54237310 MS.gene51426:CDS
GACCGGTGGCAGAAATTTGA+TGG 0.381328 2.2:-54239208 MS.gene51426:CDS
CAATGTAGAGTTAATGTATA+TGG 0.382857 2.2:-54237629 MS.gene51426:CDS
ATAAGCCTTGCAACTACATT+AGG 0.385722 2.2:+54239957 None:intergenic
AGCAAAGGCTAAAGCGCATT+TGG 0.386167 2.2:-54239592 MS.gene51426:CDS
AATTTGCATAGGAAATCTTC+TGG 0.387773 2.2:-54239126 MS.gene51426:CDS
AATGCGCTTTAGCCTTTGCT+TGG 0.391802 2.2:+54239595 None:intergenic
GGAGACTTAACAGATGTTTC+CGG 0.393264 2.2:+54239333 None:intergenic
CGCTCTTGAAACCTCCCTTT+CGG 0.395032 2.2:+54237545 None:intergenic
GAATGCTGTGAAGTGTTTAC+AGG 0.396936 2.2:-54239388 MS.gene51426:CDS
GGCAATGAGACATCCCTATC+TGG 0.407656 2.2:-54240179 MS.gene51426:intron
ATTCTTCTTTGAATAATAAA+GGG 0.413579 2.2:-54239293 MS.gene51426:CDS
GATTGATATTGCTACCAGAT+AGG 0.414071 2.2:+54240165 None:intergenic
ATAGAAACTGAGAATCTTGA+AGG 0.414969 2.2:+54239865 None:intergenic
CTAGTGAGTAATAAACAATA+TGG 0.417569 2.2:-54238751 MS.gene51426:CDS
TGTCATTATTATCAATTGAA+TGG 0.417904 2.2:+54239058 None:intergenic
ATTTGCCTTAGGTGGTTGAT+TGG 0.419546 2.2:+54239158 None:intergenic
TTGGAAACCAATGGCTTAGA+TGG 0.421919 2.2:+54239027 None:intergenic
AGAAGTATTGCCTCCAAAAT+CGG 0.425187 2.2:-54239742 MS.gene51426:CDS
GTTAACTTTAGAAACATCAT+TGG 0.426304 2.2:+54238456 None:intergenic
GAAGGCTCAAGAACTGAGAT+TGG 0.428155 2.2:+54238016 None:intergenic
GACAATCTTTGAACAAAAGC+TGG 0.430363 2.2:-54239365 MS.gene51426:CDS
GGATACAAAATGTGGACAAA+AGG 0.432659 2.2:-54237436 MS.gene51426:CDS
CATCATTGAAACATAAATCA+TGG 0.434027 2.2:-54238327 MS.gene51426:CDS
ATATGCAGAGTCTTTGAAAC+AGG 0.436345 2.2:-54240224 None:intergenic
CAGGTCGATGAAGACGAAAA+TGG 0.438366 2.2:-54240062 MS.gene51426:CDS
GCTTCTATGCCGTCCATAAG+AGG 0.439709 2.2:+54238972 None:intergenic
ATTGTTGGATGGAACAAAAC+CGG 0.440286 2.2:+54239668 None:intergenic
ATGAAGACGAAAATGGTGTT+GGG 0.440544 2.2:-54240055 MS.gene51426:CDS
GAAAGGGATGAGAGATTCAA+TGG 0.441206 2.2:-54237350 MS.gene51426:CDS
TCTAGGAAAATTATTTGTCC+TGG 0.441310 2.2:+54238861 None:intergenic
CCGCAAGAATTCTTGAACCT+GGG 0.445062 2.2:-54239623 MS.gene51426:CDS
ACTGAAGATGTCGCAATAAG+AGG 0.450581 2.2:+54239504 None:intergenic
AGAATTCTTCTAATGTTCTC+AGG 0.451320 2.2:-54239101 MS.gene51426:CDS
TGATTGTGTGAGTGAATGTA+TGG 0.451480 2.2:-54237488 MS.gene51426:CDS
GTTTCTATATTCTGGAAAGT+TGG 0.452052 2.2:-54239850 MS.gene51426:CDS
CGCTTTAGCCTTTGCTTGGG+AGG 0.453823 2.2:+54239599 None:intergenic
GCCCATCAAATTTCTGCCAC+CGG 0.457784 2.2:+54239206 None:intergenic
GGTTGATGAGCTTGTGGATA+AGG 0.459758 2.2:-54237329 MS.gene51426:CDS
CATGGAGTCAAAGCCTCAAA+AGG 0.460709 2.2:-54239796 MS.gene51426:CDS
GTAATTGGCGGCGATGCCTT+AGG 0.460790 2.2:-54238532 MS.gene51426:CDS
CTCACTAGATTTGACTTCGC+TGG 0.460882 2.2:+54238766 None:intergenic
GACAATACAAGGTCTCCAAT+AGG 0.471049 2.2:-54238562 MS.gene51426:CDS
ATGCGCTTTAGCCTTTGCTT+GGG 0.471863 2.2:+54239596 None:intergenic
TTGAGATGTAGAAGTTATGT+TGG 0.471928 2.2:-54237463 MS.gene51426:CDS
TTCTGAGCATTTGCCTTAGG+TGG 0.472013 2.2:+54239150 None:intergenic
TGTCGAGGTGTCACAGAACC+TGG 0.473644 2.2:+54238649 None:intergenic
TGGAAAGTGGTTGGATTATG+AGG 0.473906 2.2:-54237290 MS.gene51426:CDS
CAACCTCGCGAGATCGGCCG+AGG 0.475906 2.2:+54237599 None:intergenic
TCAAGAACTGAGATTGGACT+TGG 0.479255 2.2:+54238022 None:intergenic
GCCGCAAGAATTCTTGAACC+TGG 0.480122 2.2:-54239624 MS.gene51426:CDS
CATTATATAAGCAGGATTGT+TGG 0.482949 2.2:+54239653 None:intergenic
CATCATCGACGGTCTCACTA+AGG 0.485114 2.2:-54239569 MS.gene51426:CDS
CAAAAGTGAATGTTCAAAGA+AGG 0.486529 2.2:-54239245 MS.gene51426:CDS
CGAGTAGGGATCCGAGAAAC+CGG 0.493083 2.2:+54239911 None:intergenic
CTGAGATTGGACTTGGTTGT+CGG 0.498616 2.2:+54238029 None:intergenic
TTGTCCCCTATTAAGAATCC+CGG 0.498971 2.2:-54239687 MS.gene51426:CDS
TTTAGAAACATCATTGGAAG+AGG 0.499066 2.2:+54238462 None:intergenic
GATACAAAATGTGGACAAAA+GGG 0.500320 2.2:-54237435 MS.gene51426:CDS
GGTTAAAGATCTTAGAGATA+AGG 0.502958 2.2:-54239547 MS.gene51426:CDS
GAATACTAATGATCTTTCGT+TGG 0.507943 2.2:-54238617 MS.gene51426:CDS
ATTGATATTGCTACCAGATA+GGG 0.509200 2.2:+54240166 None:intergenic
ATCAGTACCATCTAAGCCAT+TGG 0.511226 2.2:-54239034 MS.gene51426:CDS
TCTCATTGCCACATTGTGGT+TGG 0.512196 2.2:+54240192 None:intergenic
CTCTCATCTATTCAACCAGT+TGG 0.518033 2.2:-54237572 MS.gene51426:CDS
AGATGTAGAAGTTATGTTGG+TGG 0.518076 2.2:-54237460 MS.gene51426:CDS
AGTTCACAACCTCGCGAGAT+CGG 0.518518 2.2:+54237593 None:intergenic
CAGCTTTCAACCGAAAATGA+AGG 0.520086 2.2:+54237998 None:intergenic
TTAACAAGGAGCAGCAATCC+AGG 0.521935 2.2:-54238667 MS.gene51426:CDS
AACCAGTTGGAAAGCCGAAA+GGG 0.522654 2.2:-54237559 MS.gene51426:CDS
GGTGTTGGGGAATATGTTAG+AGG 0.527966 2.2:-54240041 MS.gene51426:CDS
ACGATGAATCAAGGATAGAA+AGG 0.528440 2.2:-54237522 MS.gene51426:CDS
AAAGGTCTACAGACAAGGAC+TGG 0.530185 2.2:-54238834 MS.gene51426:CDS
AGGGAAGGTTTGAGTTCGAC+CGG 0.531361 2.2:-54239225 MS.gene51426:CDS
GTGGACAAAAGGGTTTGAAA+TGG 0.534070 2.2:-54237425 MS.gene51426:CDS
GCCTTTGCTTGGGAGGACCC+AGG 0.534090 2.2:+54239606 None:intergenic
CAGCTTCTTCAACATCAACT+AGG 0.535267 2.2:-54237747 MS.gene51426:CDS
TCTTTGAACAAAAGCTGGAA+TGG 0.535359 2.2:-54239360 MS.gene51426:CDS
TGTAGAAGTTATGTTGGTGG+AGG 0.536172 2.2:-54237457 MS.gene51426:CDS
CAAAAGCTGGAATGGAGCAC+CGG 0.536269 2.2:-54239352 MS.gene51426:CDS
GCAGCCTCCATTATATAAGC+AGG 0.537047 2.2:+54239645 None:intergenic
GATGAAGACGAAAATGGTGT+TGG 0.540397 2.2:-54240056 MS.gene51426:CDS
AGCGCATTTGGCATCATCGA+CGG 0.545183 2.2:-54239580 MS.gene51426:CDS
TCTGTTGCAATCCTAGATTG+AGG 0.548612 2.2:+54238434 None:intergenic
GTGAATGTTCAAAGAAGGGA+AGG 0.551174 2.2:-54239240 MS.gene51426:CDS
AAATGGTGAAAAGAAAAGAC+TGG 0.552136 2.2:-54237408 MS.gene51426:CDS
AAAAGTGAATGTTCAAAGAA+GGG 0.552284 2.2:-54239244 MS.gene51426:CDS
TTGTTGGATGGAACAAAACC+GGG 0.552886 2.2:+54239669 None:intergenic
ATCATTGAAACATAAATCAT+GGG 0.554865 2.2:-54238326 MS.gene51426:intron
TCAAGAGCGACGATGAATCA+AGG 0.555470 2.2:-54237531 MS.gene51426:CDS
CAAGGTAGAAAAGTTACGAC+TGG 0.558357 2.2:-54239000 MS.gene51426:CDS
TTGGTAGATCATCAACTACA+TGG 0.558692 2.2:-54237681 MS.gene51426:CDS
ATTCAATCTCAAGAAATCCA+TGG 0.560466 2.2:-54237826 MS.gene51426:CDS
TTCAATGGTTGATGAGCTTG+TGG 0.560544 2.2:-54237335 MS.gene51426:CDS
GGTGAAAAGAAAAGACTGGT+TGG 0.561563 2.2:-54237404 MS.gene51426:CDS
GAAATCCAATCAACCACCTA+AGG 0.567150 2.2:-54239163 MS.gene51426:CDS
TTCCCTCGGCCGATCTCGCG+AGG 0.570693 2.2:-54237602 MS.gene51426:CDS
TAAAGATCTTAGAGATAAGG+TGG 0.573035 2.2:-54239544 MS.gene51426:CDS
ACCGGTGGCAGAAATTTGAT+GGG 0.573900 2.2:-54239207 MS.gene51426:CDS
CAACCAGTTGGAAAGCCGAA+AGG 0.575183 2.2:-54237560 MS.gene51426:CDS
TAGCCAATATGGAAAGTGGT+TGG 0.575562 2.2:-54237299 MS.gene51426:CDS
CCCAGGTTCAAGAATTCTTG+CGG 0.576295 2.2:+54239623 None:intergenic
AAGGTGGACTCTTCGCAGAA+AGG 0.576510 2.2:-54239528 MS.gene51426:CDS
ATATAAGCAGGATTGTTGGA+TGG 0.580763 2.2:+54239657 None:intergenic
TGCTTGATACAGACAATACA+AGG 0.581399 2.2:-54238573 MS.gene51426:CDS
TGAGTAATAAACAATATGGT+GGG 0.582248 2.2:-54238747 MS.gene51426:CDS
TGAGTAGCCAATATGGAAAG+TGG 0.584195 2.2:-54237303 MS.gene51426:CDS
TCCATTGTAAAATCTAAAGT+CGG 0.584358 2.2:-54238937 MS.gene51426:CDS
ATAGGATACAATGTAATTGG+CGG 0.584996 2.2:-54238544 MS.gene51426:CDS
ATGTTTGCAGGGTGATGAGA+TGG 0.589624 2.2:-54238071 MS.gene51426:intron
GAATCTTCTTCTGCGTGTGT+AGG 0.589839 2.2:+54239312 None:intergenic
TGATGTTGAAGAAGCTGAGT+CGG 0.591186 2.2:+54237753 None:intergenic
GTGAGTAATAAACAATATGG+TGG 0.591690 2.2:-54238748 MS.gene51426:CDS
ACCTGGGTCCTCCCAAGCAA+AGG 0.594584 2.2:-54239607 MS.gene51426:CDS
ATCATCGACGGTCTCACTAA+GGG 0.595032 2.2:-54239568 MS.gene51426:CDS
CCATTGGTTTCCAACTCGCA+AGG 0.595241 2.2:-54239018 MS.gene51426:CDS
CAATCCTGCTTATATAATGG+AGG 0.595285 2.2:-54239649 MS.gene51426:CDS
GTATTCTTTCCACCTTGTCG+AGG 0.598057 2.2:+54238634 None:intergenic
ACGGATGTTATCAGTGCAGA+AGG 0.599029 2.2:-54237959 MS.gene51426:intron
CATTCACTACACCATTAACA+AGG 0.608076 2.2:-54238681 MS.gene51426:CDS
CTGTTCTAAAAGGATACCTA+AGG 0.611780 2.2:+54238516 None:intergenic
CTGTGAATCCTCGATGAGCA+CGG 0.612501 2.2:-54237978 MS.gene51426:CDS
TCTCATCAGAATCTACTCAA+AGG 0.615246 2.2:-54239422 MS.gene51426:CDS
CCTTGCGAGTTGGAAACCAA+TGG 0.620891 2.2:+54239018 None:intergenic
ACTATGATAAAGAAGCAGAC+AGG 0.622027 2.2:-54237724 MS.gene51426:CDS
TAGAAACTGAGAATCTTGAA+GGG 0.623762 2.2:+54239866 None:intergenic
GGACGGCATAGAAGCTCAAG+TGG 0.631619 2.2:-54238964 MS.gene51426:CDS
AATTTCTCAAAGAAGAAGCA+AGG 0.634224 2.2:-54239445 MS.gene51426:CDS
ACACTTCACAGCATTCGACT+CGG 0.634714 2.2:+54239395 None:intergenic
CTGGAGATTCCTCTTATGGA+CGG 0.637212 2.2:-54238981 MS.gene51426:CDS
TAGGGATCCGAGAAACCGGA+AGG 0.638892 2.2:+54239915 None:intergenic
GACAGTTTAAACAGTAGCTG+TGG 0.639820 2.2:-54238385 MS.gene51426:CDS
CAGTTGGAAAGCCGAAAGGG+AGG 0.641527 2.2:-54237556 MS.gene51426:CDS
GAGCTCCTAATGTAGTTGCA+AGG 0.641567 2.2:-54239962 MS.gene51426:CDS
AACTCTGCATCAGATTCAGT+AGG 0.641798 2.2:+54237778 None:intergenic
AAAGAAAAGGTCTACAGACA+AGG 0.643351 2.2:-54238839 MS.gene51426:CDS
AATGCTGTGAAGTGTTTACA+GGG 0.647568 2.2:-54239387 MS.gene51426:CDS
TGAAGACGAAAATGGTGTTG+GGG 0.648206 2.2:-54240054 MS.gene51426:CDS
AACCTCGCGAGATCGGCCGA+GGG 0.650868 2.2:+54237600 None:intergenic
GATGTCTCATTGCCACATTG+TGG 0.650908 2.2:+54240188 None:intergenic
TGGTAGATCATCAACTACAT+GGG 0.652706 2.2:-54237680 MS.gene51426:CDS
GAAGGTTTGAGTTCGACCGG+TGG 0.655900 2.2:-54239222 MS.gene51426:CDS
AAAATGAAATTCTATACACC+AGG 0.659647 2.2:-54238879 MS.gene51426:CDS
AAGAAAATCCAACCACAATG+TGG 0.662792 2.2:-54240200 MS.gene51426:CDS
TGTCGGCAATTGAATGACAG+AGG 0.665750 2.2:+54238046 None:intergenic
TGATTCTGGAAGATTGGTCA+AGG 0.670057 2.2:+54238348 None:intergenic
AAGTTGAGGGAATTGACAAG+TGG 0.671342 2.2:-54238493 MS.gene51426:CDS
GGTTCTGTGACACCTCGACA+AGG 0.671483 2.2:-54238646 MS.gene51426:CDS
GGATCCGAGAAACCGGAAGG+AGG 0.677160 2.2:+54239918 None:intergenic
AAAACCGGGATTCTTAATAG+GGG 0.690424 2.2:+54239683 None:intergenic
TTGGTGGAGGATACAAAATG+TGG 0.699477 2.2:-54237444 MS.gene51426:CDS
TCTGTGACACCTCGACAAGG+TGG 0.707322 2.2:-54238643 MS.gene51426:CDS
GTTACAAGTGATGACACATG+TGG 0.725091 2.2:-54239990 MS.gene51426:CDS
GATAACATCCGTGCTCATCG+AGG 0.725688 2.2:+54237970 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAATAATCACTTAAATA+TGG + chr2.2:54239132-54239151 None:intergenic 15.0%
!! ATTCTTCTTTGAATAATAAA+GGG - chr2.2:54238124-54238143 MS.gene51426:intron 15.0%
!! TGATCAAATATTTAATTCTT+TGG - chr2.2:54240181-54240200 MS.gene51426:CDS 15.0%
!!! AGTGATTATTCAATAATTTT+TGG + chr2.2:54239262-54239281 None:intergenic 15.0%
!!! ATAATCACTCTTTTATTAAT+TGG - chr2.2:54239273-54239292 MS.gene51426:CDS 15.0%
!!! TTTTACTGTATATATTTTTC+AGG - chr2.2:54239549-54239568 MS.gene51426:CDS 15.0%
!! AAAAATTATGTACAAGTAAC+AGG + chr2.2:54237296-54237315 None:intergenic 20.0%
!! AAAACCATAAACAAAAAGTT+AGG - chr2.2:54239199-54239218 MS.gene51426:CDS 20.0%
!! ATCATTGAAACATAAATCAT+GGG - chr2.2:54239091-54239110 MS.gene51426:CDS 20.0%
!! GATTCTTCTTTGAATAATAA+AGG - chr2.2:54238123-54238142 MS.gene51426:intron 20.0%
!! TGTCATTATTATCAATTGAA+TGG + chr2.2:54238362-54238381 None:intergenic 20.0%
!!! ATAATTTTCCTAGAAAGAAA+AGG - chr2.2:54238565-54238584 MS.gene51426:CDS 20.0%
!!! GCTAAATTTATACTTTTTGA+TGG - chr2.2:54239225-54239244 MS.gene51426:CDS 20.0%
!!! TCAAAAAGTATAAATTTAGC+AGG + chr2.2:54239225-54239244 None:intergenic 20.0%
! AAAAGTGAATGTTCAAAGAA+GGG - chr2.2:54238173-54238192 MS.gene51426:intron 25.0%
! AAAATGAAATTCTATACACC+AGG - chr2.2:54238538-54238557 MS.gene51426:CDS 25.0%
! ATTACATGTTTAATTCTTCC+AGG - chr2.2:54237336-54237355 MS.gene51426:CDS 25.0%
! CAATGTAGAGTTAATGTATA+TGG - chr2.2:54239788-54239807 MS.gene51426:CDS 25.0%
! CATCATTGAAACATAAATCA+TGG - chr2.2:54239090-54239109 MS.gene51426:CDS 25.0%
! CTAGTGAGTAATAAACAATA+TGG - chr2.2:54238666-54238685 MS.gene51426:CDS 25.0%
! CTTAAAAAGTTACTGTTGTT+TGG - chr2.2:54239490-54239509 MS.gene51426:CDS 25.0%
! GTATAATGTCATCAGTTTAA+TGG - chr2.2:54239174-54239193 MS.gene51426:CDS 25.0%
! TCCTTGAAAAATTAAATCCA+TGG + chr2.2:54239611-54239630 None:intergenic 25.0%
! TGAGTAATAAACAATATGGT+GGG - chr2.2:54238670-54238689 MS.gene51426:CDS 25.0%
! TGAGTTAATGACTTACTTAA+TGG + chr2.2:54239323-54239342 None:intergenic 25.0%
! TTAATTTAATGACACATGAG+TGG - chr2.2:54239520-54239539 MS.gene51426:CDS 25.0%
! TTATGTTTCAATGATGATTC+TGG + chr2.2:54239086-54239105 None:intergenic 25.0%
!! ACATTTTCTATGATGAAGTT+TGG - chr2.2:54239717-54239736 MS.gene51426:CDS 25.0%
!! ATCACTCTTTTATTAATTGG+TGG - chr2.2:54239276-54239295 MS.gene51426:CDS 25.0%
!! GTTAACTTTAGAAACATCAT+TGG + chr2.2:54238964-54238983 None:intergenic 25.0%
!! TAGAATTTCATTTTCGCTAT+CGG + chr2.2:54238532-54238551 None:intergenic 25.0%
!! TCCATTGTAAAATCTAAAGT+CGG - chr2.2:54238480-54238499 MS.gene51426:CDS 25.0%
!!! AAGGAAATTTTGAGTTTGAA+AGG - chr2.2:54240050-54240069 MS.gene51426:CDS 25.0%
!!! AGGAAATTTTGAGTTTGAAA+GGG - chr2.2:54240051-54240070 MS.gene51426:CDS 25.0%
!!! TCCATGGATTTAATTTTTCA+AGG - chr2.2:54239607-54239626 MS.gene51426:CDS 25.0%
!!! TCTCTTTGAAACTTTTCAAT+TGG + chr2.2:54237658-54237677 None:intergenic 25.0%
AAAAGTTTATGGTGTGTAAC+AGG + chr2.2:54237712-54237731 None:intergenic 30.0%
AAATGGTGAAAAGAAAAGAC+TGG - chr2.2:54240009-54240028 MS.gene51426:CDS 30.0%
AATTTCTCAAAGAAGAAGCA+AGG - chr2.2:54237972-54237991 MS.gene51426:CDS 30.0%
AATTTGCATAGGAAATCTTC+TGG - chr2.2:54238291-54238310 MS.gene51426:intron 30.0%
AGAAGTGAAAAAGAAAGACA+TGG - chr2.2:54238698-54238717 MS.gene51426:CDS 30.0%
AGAATTCTTCTAATGTTCTC+AGG - chr2.2:54238316-54238335 MS.gene51426:intron 30.0%
ATAGAAACTGAGAATCTTGA+AGG + chr2.2:54237555-54237574 None:intergenic 30.0%
ATAGGATACAATGTAATTGG+CGG - chr2.2:54238873-54238892 MS.gene51426:CDS 30.0%
ATGCTCAGAAAAATTTGCAT+AGG - chr2.2:54238280-54238299 MS.gene51426:intron 30.0%
ATTAACTCAAAGATGTTTGC+AGG - chr2.2:54239334-54239353 MS.gene51426:CDS 30.0%
ATTCAATCTCAAGAAATCCA+TGG - chr2.2:54239591-54239610 MS.gene51426:CDS 30.0%
ATTGATATTGCTACCAGATA+GGG + chr2.2:54237254-54237273 None:intergenic 30.0%
CAAAAGTGAATGTTCAAAGA+AGG - chr2.2:54238172-54238191 MS.gene51426:intron 30.0%
CAACAATCCTGCTTATATAA+TGG - chr2.2:54237765-54237784 MS.gene51426:CDS 30.0%
CATTATATAAGCAGGATTGT+TGG + chr2.2:54237767-54237786 None:intergenic 30.0%
CCAATAGGATACAATGTAAT+TGG - chr2.2:54238870-54238889 MS.gene51426:CDS 30.0%
CCAATTACATTGTATCCTAT+TGG + chr2.2:54238873-54238892 None:intergenic 30.0%
GAATACTAATGATCTTTCGT+TGG - chr2.2:54238800-54238819 MS.gene51426:CDS 30.0%
GATACAAAATGTGGACAAAA+GGG - chr2.2:54239982-54240001 MS.gene51426:CDS 30.0%
GATTCTCAGTTTCTATATTC+TGG - chr2.2:54237559-54237578 MS.gene51426:CDS 30.0%
GGTTAAAGATCTTAGAGATA+AGG - chr2.2:54237870-54237889 MS.gene51426:intron 30.0%
GTGAGTAATAAACAATATGG+TGG - chr2.2:54238669-54238688 MS.gene51426:CDS 30.0%
TAAAGATCTTAGAGATAAGG+TGG - chr2.2:54237873-54237892 MS.gene51426:intron 30.0%
TAATAGGGGACAAAAGTTTA+TGG + chr2.2:54237723-54237742 None:intergenic 30.0%
TAGAAACTGAGAATCTTGAA+GGG + chr2.2:54237554-54237573 None:intergenic 30.0%
TCTAGGAAAATTATTTGTCC+TGG + chr2.2:54238559-54238578 None:intergenic 30.0%
TGAGAACATTAGAAGAATTC+TGG + chr2.2:54238317-54238336 None:intergenic 30.0%
TTAACTCAAAGATGTTTGCA+GGG - chr2.2:54239335-54239354 MS.gene51426:CDS 30.0%
TTGAGATGTAGAAGTTATGT+TGG - chr2.2:54239954-54239973 MS.gene51426:CDS 30.0%
TTTAGAAACATCATTGGAAG+AGG + chr2.2:54238958-54238977 None:intergenic 30.0%
! AAAGTTGGTTGAAAAAGTTG+AGG - chr2.2:54237582-54237601 MS.gene51426:CDS 30.0%
! AAGTTGGTTGAAAAAGTTGA+GGG - chr2.2:54237583-54237602 MS.gene51426:CDS 30.0%
! AGATCAAGATATGTCGTTTA+CGG - chr2.2:54239010-54239029 MS.gene51426:CDS 30.0%
! ATGTATATGGATTTTTCCCT+CGG - chr2.2:54239801-54239820 MS.gene51426:CDS 30.0%
! GTTTCTATATTCTGGAAAGT+TGG - chr2.2:54237567-54237586 MS.gene51426:CDS 30.0%
! TCCGACTTTAGATTTTACAA+TGG + chr2.2:54238484-54238503 None:intergenic 30.0%
! TCTAAAGTTAACCTCAATCT+AGG - chr2.2:54238972-54238991 MS.gene51426:CDS 30.0%
!! TTTGAACATTCACTTTTGCT+TGG + chr2.2:54238170-54238189 None:intergenic 30.0%
AAAACCGGGATTCTTAATAG+GGG + chr2.2:54237737-54237756 None:intergenic 35.0%
AAAGAAAAGGTCTACAGACA+AGG - chr2.2:54238578-54238597 MS.gene51426:CDS 35.0%
AAGAAAATCCAACCACAATG+TGG - chr2.2:54237217-54237236 MS.gene51426:CDS 35.0%
AAGGATATGAGTAGCCAATA+TGG - chr2.2:54240107-54240126 MS.gene51426:intron 35.0%
AATCCAACCACTTTCCATAT+TGG + chr2.2:54240124-54240143 None:intergenic 35.0%
AATGTAGTTGCAAGGCTTAT+GGG - chr2.2:54237463-54237482 MS.gene51426:CDS 35.0%
ACAAAACCGGGATTCTTAAT+AGG + chr2.2:54237739-54237758 None:intergenic 35.0%
ACGATGAATCAAGGATAGAA+AGG - chr2.2:54239895-54239914 MS.gene51426:CDS 35.0%
ACTATGATAAAGAAGCAGAC+AGG - chr2.2:54239693-54239712 MS.gene51426:CDS 35.0%
AGATGTAGAAGTTATGTTGG+TGG - chr2.2:54239957-54239976 MS.gene51426:CDS 35.0%
AGGGATCGTGTATCAAAAAA+TGG + chr2.2:54237535-54237554 None:intergenic 35.0%
ATAAGCCTTGCAACTACATT+AGG + chr2.2:54237463-54237482 None:intergenic 35.0%
ATATAAGCAGGATTGTTGGA+TGG + chr2.2:54237763-54237782 None:intergenic 35.0%
ATGAAGACGAAAATGGTGTT+GGG - chr2.2:54237362-54237381 MS.gene51426:CDS 35.0%
ATTGTTGGATGGAACAAAAC+CGG + chr2.2:54237752-54237771 None:intergenic 35.0%
CAAAACCGGGATTCTTAATA+GGG + chr2.2:54237738-54237757 None:intergenic 35.0%
CAATCCTGCTTATATAATGG+AGG - chr2.2:54237768-54237787 MS.gene51426:CDS 35.0%
CATTCACTACACCATTAACA+AGG - chr2.2:54238736-54238755 MS.gene51426:CDS 35.0%
GACAATCTTTGAACAAAAGC+TGG - chr2.2:54238052-54238071 MS.gene51426:CDS 35.0%
GATTGATATTGCTACCAGAT+AGG + chr2.2:54237255-54237274 None:intergenic 35.0%
GGATACAAAATGTGGACAAA+AGG - chr2.2:54239981-54240000 MS.gene51426:CDS 35.0%
GTTGGCAAAAGATGTGTATA+AGG - chr2.2:54240031-54240050 MS.gene51426:CDS 35.0%
TAATGTAGTTGCAAGGCTTA+TGG - chr2.2:54237462-54237481 MS.gene51426:CDS 35.0%
TCTCATCAGAATCTACTCAA+AGG - chr2.2:54237995-54238014 MS.gene51426:CDS 35.0%
TCTTTGAACAAAAGCTGGAA+TGG - chr2.2:54238057-54238076 MS.gene51426:CDS 35.0%
TGATTGTGTGAGTGAATGTA+TGG - chr2.2:54239929-54239948 MS.gene51426:CDS 35.0%
TGCTTGATACAGACAATACA+AGG - chr2.2:54238844-54238863 MS.gene51426:CDS 35.0%
TGGTAGATCATCAACTACAT+GGG - chr2.2:54239737-54239756 MS.gene51426:CDS 35.0%
TTGGTAGATCATCAACTACA+TGG - chr2.2:54239736-54239755 MS.gene51426:CDS 35.0%
! AATGCTGTGAAGTGTTTACA+GGG - chr2.2:54238030-54238049 MS.gene51426:CDS 35.0%
! AGTTCTTGAGCCTTCATTTT+CGG - chr2.2:54239409-54239428 MS.gene51426:CDS 35.0%
! CAATGATGATTCTGGAAGAT+TGG + chr2.2:54239078-54239097 None:intergenic 35.0%
! GGTCTAGTAATAACCTTTTG+AGG + chr2.2:54237637-54237656 None:intergenic 35.0%
! TCTGTAGACCTTTTCTTTCT+AGG + chr2.2:54238576-54238595 None:intergenic 35.0%
! TTTTTCTGAGCATTTGCCTT+AGG + chr2.2:54238273-54238292 None:intergenic 35.0%
!! AGAAGTATTGCCTCCAAAAT+CGG - chr2.2:54237675-54237694 MS.gene51426:CDS 35.0%
!! CAGGCCTAACTTTTTGTTTA+TGG + chr2.2:54239206-54239225 None:intergenic 35.0%
!! CTGTTCTAAAAGGATACCTA+AGG + chr2.2:54238904-54238923 None:intergenic 35.0%
!! GAGGTTGATGCTTATGAATT+TGG - chr2.2:54240146-54240165 MS.gene51426:intron 35.0%
!!! CCTTTTAGAACAGAAGTTGA+GGG - chr2.2:54238911-54238930 MS.gene51426:CDS 35.0%
!!! TCCTTTTAGAACAGAAGTTG+AGG - chr2.2:54238910-54238929 MS.gene51426:CDS 35.0%
AACTCTGCATCAGATTCAGT+AGG + chr2.2:54239642-54239661 None:intergenic 40.0%
AAGTTGAGGGAATTGACAAG+TGG - chr2.2:54238924-54238943 MS.gene51426:CDS 40.0%
ACTGAAGATGTCGCAATAAG+AGG + chr2.2:54237916-54237935 None:intergenic 40.0%
ATCAGTACCATCTAAGCCAT+TGG - chr2.2:54238383-54238402 MS.gene51426:CDS 40.0%
ATTTGCCTTAGGTGGTTGAT+TGG + chr2.2:54238262-54238281 None:intergenic 40.0%
CAAGGTAGAAAAGTTACGAC+TGG - chr2.2:54238417-54238436 MS.gene51426:CDS 40.0%
CAGCTTCTTCAACATCAACT+AGG - chr2.2:54239670-54239689 MS.gene51426:CDS 40.0%
CAGCTTTCAACCGAAAATGA+AGG + chr2.2:54239422-54239441 None:intergenic 40.0%
CTCTCATCTATTCAACCAGT+TGG - chr2.2:54239845-54239864 MS.gene51426:CDS 40.0%
GAAAGGGATGAGAGATTCAA+TGG - chr2.2:54240067-54240086 MS.gene51426:intron 40.0%
GAAATCCAATCAACCACCTA+AGG - chr2.2:54238254-54238273 MS.gene51426:intron 40.0%
GACAATACAAGGTCTCCAAT+AGG - chr2.2:54238855-54238874 MS.gene51426:CDS 40.0%
GACAGTTTAAACAGTAGCTG+TGG - chr2.2:54239032-54239051 MS.gene51426:CDS 40.0%
GATGAAGACGAAAATGGTGT+TGG - chr2.2:54237361-54237380 MS.gene51426:CDS 40.0%
GGAGACTTAACAGATGTTTC+CGG + chr2.2:54238087-54238106 None:intergenic 40.0%
GGGATCTTCTAGCAATTTCA+TGG - chr2.2:54237603-54237622 MS.gene51426:CDS 40.0%
GGTGAAAAGAAAAGACTGGT+TGG - chr2.2:54240013-54240032 MS.gene51426:CDS 40.0%
GTGAATGTTCAAAGAAGGGA+AGG - chr2.2:54238177-54238196 MS.gene51426:intron 40.0%
GTGGACAAAAGGGTTTGAAA+TGG - chr2.2:54239992-54240011 MS.gene51426:CDS 40.0%
GTTACAAGTGATGACACATG+TGG - chr2.2:54237427-54237446 MS.gene51426:CDS 40.0%
TAGCCAATATGGAAAGTGGT+TGG - chr2.2:54240118-54240137 MS.gene51426:intron 40.0%
TCAAGAACTGAGATTGGACT+TGG + chr2.2:54239398-54239417 None:intergenic 40.0%
TCTGTTGCAATCCTAGATTG+AGG + chr2.2:54238986-54239005 None:intergenic 40.0%
TGAGTAGCCAATATGGAAAG+TGG - chr2.2:54240114-54240133 MS.gene51426:intron 40.0%
TGATGTTGAAGAAGCTGAGT+CGG + chr2.2:54239667-54239686 None:intergenic 40.0%
TGGAAAGTGGTTGGATTATG+AGG - chr2.2:54240127-54240146 MS.gene51426:intron 40.0%
TTAGATTCTTTGCCTCCTTC+CGG - chr2.2:54237487-54237506 MS.gene51426:CDS 40.0%
TTGGAAACCAATGGCTTAGA+TGG + chr2.2:54238393-54238412 None:intergenic 40.0%
TTGGTGGAGGATACAAAATG+TGG - chr2.2:54239973-54239992 MS.gene51426:CDS 40.0%
TTGTCCCCTATTAAGAATCC+CGG - chr2.2:54237730-54237749 MS.gene51426:CDS 40.0%
TTGTTGGATGGAACAAAACC+GGG + chr2.2:54237751-54237770 None:intergenic 40.0%
! AACTTTTCTACCTTGCGAGT+TGG + chr2.2:54238412-54238431 None:intergenic 40.0%
! ATCAAAAAATGGCGTCGAGT+AGG + chr2.2:54237524-54237543 None:intergenic 40.0%
! CCCTCAACTTCTGTTCTAAA+AGG + chr2.2:54238914-54238933 None:intergenic 40.0%
! CGACATCTTCAGTAGCTTTT+AGG - chr2.2:54237923-54237942 MS.gene51426:intron 40.0%
! GAATGCTGTGAAGTGTTTAC+AGG - chr2.2:54238029-54238048 MS.gene51426:CDS 40.0%
! TCAAAAAATGGCGTCGAGTA+GGG + chr2.2:54237523-54237542 None:intergenic 40.0%
! TCATGTCGAGATGCTCTTTT+TGG + chr2.2:54238236-54238255 None:intergenic 40.0%
! TGAAGACGAAAATGGTGTTG+GGG - chr2.2:54237363-54237382 MS.gene51426:CDS 40.0%
! TGATTCTGGAAGATTGGTCA+AGG + chr2.2:54239072-54239091 None:intergenic 40.0%
! TGTAGAAGTTATGTTGGTGG+AGG - chr2.2:54239960-54239979 MS.gene51426:CDS 40.0%
!! TTCAATGGTTGATGAGCTTG+TGG - chr2.2:54240082-54240101 MS.gene51426:intron 40.0%
!!! ATTGATCTTGCCGATTTTGG+AGG + chr2.2:54237688-54237707 None:intergenic 40.0%
!!! CTTCAGTAGCTTTTAGGACT+CGG - chr2.2:54237929-54237948 MS.gene51426:intron 40.0%
!!! GGAATTGATCTTGCCGATTT+TGG + chr2.2:54237691-54237710 None:intergenic 40.0%
!!! TTCAGTAGCTTTTAGGACTC+GGG - chr2.2:54237930-54237949 MS.gene51426:intron 40.0%
AAAGGTCTACAGACAAGGAC+TGG - chr2.2:54238583-54238602 MS.gene51426:CDS 45.0%
AACCAGTTGGAAAGCCGAAA+GGG - chr2.2:54239858-54239877 MS.gene51426:CDS 45.0%
ACACTTCACAGCATTCGACT+CGG + chr2.2:54238025-54238044 None:intergenic 45.0%
ACCGGTGGCAGAAATTTGAT+GGG - chr2.2:54238210-54238229 MS.gene51426:intron 45.0%
ACGACTGGAGATTCCTCTTA+TGG - chr2.2:54238432-54238451 MS.gene51426:CDS 45.0%
ACGGATGTTATCAGTGCAGA+AGG - chr2.2:54239458-54239477 MS.gene51426:CDS 45.0%
AGCAAAGGCTAAAGCGCATT+TGG - chr2.2:54237825-54237844 MS.gene51426:CDS 45.0%
ATCATCGACGGTCTCACTAA+GGG - chr2.2:54237849-54237868 MS.gene51426:CDS 45.0%
ATCGAAAAAGTCAGCTGTGG+AGG - chr2.2:54238503-54238522 MS.gene51426:CDS 45.0%
ATGTTTGCAGGGTGATGAGA+TGG - chr2.2:54239346-54239365 MS.gene51426:CDS 45.0%
CAGGTCGATGAAGACGAAAA+TGG - chr2.2:54237355-54237374 MS.gene51426:CDS 45.0%
CATGGAGTCAAAGCCTCAAA+AGG - chr2.2:54237621-54237640 MS.gene51426:CDS 45.0%
CCCAGGTTCAAGAATTCTTG+CGG + chr2.2:54237797-54237816 None:intergenic 45.0%
CCGCAAGAATTCTTGAACCT+GGG - chr2.2:54237794-54237813 MS.gene51426:CDS 45.0%
CTGGAGATTCCTCTTATGGA+CGG - chr2.2:54238436-54238455 MS.gene51426:CDS 45.0%
GAAGGCTCAAGAACTGAGAT+TGG + chr2.2:54239404-54239423 None:intergenic 45.0%
GAATCTTCTTCTGCGTGTGT+AGG + chr2.2:54238108-54238127 None:intergenic 45.0%
GAGCTCCTAATGTAGTTGCA+AGG - chr2.2:54237455-54237474 MS.gene51426:CDS 45.0%
GATGTCTCATTGCCACATTG+TGG + chr2.2:54237232-54237251 None:intergenic 45.0%
GCAGCCTCCATTATATAAGC+AGG + chr2.2:54237775-54237794 None:intergenic 45.0%
GGATTGCTGCTCCTTGTTAA+TGG + chr2.2:54238750-54238769 None:intergenic 45.0%
GTATTCTTTCCACCTTGTCG+AGG + chr2.2:54238786-54238805 None:intergenic 45.0%
TCAAGAGCGACGATGAATCA+AGG - chr2.2:54239886-54239905 MS.gene51426:CDS 45.0%
TCTCATTGCCACATTGTGGT+TGG + chr2.2:54237228-54237247 None:intergenic 45.0%
TGTCGGCAATTGAATGACAG+AGG + chr2.2:54239374-54239393 None:intergenic 45.0%
TTAACAAGGAGCAGCAATCC+AGG - chr2.2:54238750-54238769 MS.gene51426:CDS 45.0%
TTCTGAGCATTTGCCTTAGG+TGG + chr2.2:54238270-54238289 None:intergenic 45.0%
! AATGCGCTTTAGCCTTTGCT+TGG + chr2.2:54237825-54237844 None:intergenic 45.0%
! ATGCGCTTTAGCCTTTGCTT+GGG + chr2.2:54237824-54237843 None:intergenic 45.0%
! CATTTTCGTCTTCATCGACC+TGG + chr2.2:54237357-54237376 None:intergenic 45.0%
! CTCACTAGATTTGACTTCGC+TGG + chr2.2:54238654-54238673 None:intergenic 45.0%
! CTGAGATTGGACTTGGTTGT+CGG + chr2.2:54239391-54239410 None:intergenic 45.0%
! GGTGTTGGGGAATATGTTAG+AGG - chr2.2:54237376-54237395 MS.gene51426:CDS 45.0%
!! GGTTGATGAGCTTGTGGATA+AGG - chr2.2:54240088-54240107 MS.gene51426:intron 45.0%
AGCGCATTTGGCATCATCGA+CGG - chr2.2:54237837-54237856 MS.gene51426:CDS 50.0%
AGTTCACAACCTCGCGAGAT+CGG + chr2.2:54239827-54239846 None:intergenic 50.0%
CAAAAGCTGGAATGGAGCAC+CGG - chr2.2:54238065-54238084 MS.gene51426:intron 50.0%
CAACCAGTTGGAAAGCCGAA+AGG - chr2.2:54239857-54239876 MS.gene51426:CDS 50.0%
CATCATCGACGGTCTCACTA+AGG - chr2.2:54237848-54237867 MS.gene51426:CDS 50.0%
CGCTCTTGAAACCTCCCTTT+CGG + chr2.2:54239875-54239894 None:intergenic 50.0%
CGGATCGAAAAAGTCAGCTG+TGG - chr2.2:54238500-54238519 MS.gene51426:CDS 50.0%
CTGTGAATCCTCGATGAGCA+CGG - chr2.2:54239439-54239458 MS.gene51426:CDS 50.0%
GACCGGTGGCAGAAATTTGA+TGG - chr2.2:54238209-54238228 MS.gene51426:intron 50.0%
GATAACATCCGTGCTCATCG+AGG + chr2.2:54239450-54239469 None:intergenic 50.0%
GCCCATCAAATTTCTGCCAC+CGG + chr2.2:54238214-54238233 None:intergenic 50.0%
GCCGCAAGAATTCTTGAACC+TGG - chr2.2:54237793-54237812 MS.gene51426:CDS 50.0%
GCTTCTATGCCGTCCATAAG+AGG + chr2.2:54238448-54238467 None:intergenic 50.0%
GGCAATGAGACATCCCTATC+TGG - chr2.2:54237238-54237257 MS.gene51426:CDS 50.0%
TTTGCCTCCTTCCGGTTTCT+CGG - chr2.2:54237495-54237514 MS.gene51426:CDS 50.0%
! AAGGTGGACTCTTCGCAGAA+AGG - chr2.2:54237889-54237908 MS.gene51426:intron 50.0%
! AGGGAAGGTTTGAGTTCGAC+CGG - chr2.2:54238192-54238211 MS.gene51426:intron 50.0%
! CCTTGCGAGTTGGAAACCAA+TGG + chr2.2:54238402-54238421 None:intergenic 50.0%
!! CCATTGGTTTCCAACTCGCA+AGG - chr2.2:54238399-54238418 MS.gene51426:CDS 50.0%
CAGTTGGAAAGCCGAAAGGG+AGG - chr2.2:54239861-54239880 MS.gene51426:CDS 55.0%
CGAGTAGGGATCCGAGAAAC+CGG + chr2.2:54237509-54237528 None:intergenic 55.0%
CTCCCTTTCGGCTTTCCAAC+TGG + chr2.2:54239863-54239882 None:intergenic 55.0%
GGACGGCATAGAAGCTCAAG+TGG - chr2.2:54238453-54238472 MS.gene51426:CDS 55.0%
GGTTCTGTGACACCTCGACA+AGG - chr2.2:54238771-54238790 MS.gene51426:CDS 55.0%
GTAATTGGCGGCGATGCCTT+AGG - chr2.2:54238885-54238904 MS.gene51426:CDS 55.0%
TAGGGATCCGAGAAACCGGA+AGG + chr2.2:54237505-54237524 None:intergenic 55.0%
TCTGTGACACCTCGACAAGG+TGG - chr2.2:54238774-54238793 MS.gene51426:CDS 55.0%
! CGCTTTAGCCTTTGCTTGGG+AGG + chr2.2:54237821-54237840 None:intergenic 55.0%
! GAAGGTTTGAGTTCGACCGG+TGG - chr2.2:54238195-54238214 MS.gene51426:intron 55.0%
! TGTCGAGGTGTCACAGAACC+TGG + chr2.2:54238771-54238790 None:intergenic 55.0%
ACCTGGGTCCTCCCAAGCAA+AGG - chr2.2:54237810-54237829 MS.gene51426:CDS 60.0%
GGATCCGAGAAACCGGAAGG+AGG + chr2.2:54237502-54237521 None:intergenic 60.0%
AACCTCGCGAGATCGGCCGA+GGG + chr2.2:54239820-54239839 None:intergenic 65.0%
GCCTTTGCTTGGGAGGACCC+AGG + chr2.2:54237814-54237833 None:intergenic 65.0%
CAACCTCGCGAGATCGGCCG+AGG + chr2.2:54239821-54239840 None:intergenic 70.0%
TTCCCTCGGCCGATCTCGCG+AGG - chr2.2:54239815-54239834 MS.gene51426:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 54237201 54240238 54237201 ID=MS.gene51426
chr2.2 mRNA 54237201 54240238 54237201 ID=MS.gene51426.t1;Parent=MS.gene51426
chr2.2 exon 54240180 54240238 54240180 ID=MS.gene51426.t1.exon1;Parent=MS.gene51426.t1
chr2.2 CDS 54240180 54240238 54240180 ID=cds.MS.gene51426.t1;Parent=MS.gene51426.t1
chr2.2 exon 54238327 54240081 54238327 ID=MS.gene51426.t1.exon2;Parent=MS.gene51426.t1
chr2.2 CDS 54238327 54240081 54238327 ID=cds.MS.gene51426.t1;Parent=MS.gene51426.t1
chr2.2 exon 54237960 54238083 54237960 ID=MS.gene51426.t1.exon3;Parent=MS.gene51426.t1
chr2.2 CDS 54237960 54238083 54237960 ID=cds.MS.gene51426.t1;Parent=MS.gene51426.t1
chr2.2 exon 54237201 54237868 54237201 ID=MS.gene51426.t1.exon4;Parent=MS.gene51426.t1
chr2.2 CDS 54237201 54237868 54237201 ID=cds.MS.gene51426.t1;Parent=MS.gene51426.t1
Gene Sequence

>MS.gene51426

AGTCTTTGAAACAGGAAAGAAAATCCAACCACAATGTGGCAATGAGACATCCCTATCTGGTAGCAATATCAATCACTATATCTTCAATTTTACCTGTTACTTGTACATAATTTTTTGTTATGAAATTAGCTAATTATTACATGTTTAATTCTTCCAGGTCGATGAAGACGAAAATGGTGTTGGGGAATATGTTAGAGGAAGCTGTGATCATAGTTATGCTTCATCTGTTACAAGTGATGACACATGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCTTTGCCTCCTTCCGGTTTCTCGGATCCCTACTCGACGCCATTTTTTGATACACGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGAGGGATCTTCTAGCAATTTCATGGAGTCAAAGCCTCAAAAGGTTATTACTAGACCAATTGAAAAGTTTCAAAGAGAAGTATTGCCTCCAAAATCGGCAAGATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGTTTTGTTCCATCCAACAATCCTGCTTATATAATGGAGGCTGCCGCAAGAATTCTTGAACCTGGGTCCTCCCAAGCAAAGGCTAAAGCGCATTTGGCATCATCGACGGTCTCACTAAGGGTTAAAGATCTTAGAGATAAGGTGGACTCTTCGCAGAAAGGACCTCTTATTGCGACATCTTCAGTAGCTTTTAGGACTCGGGAGCTAAAAGAAAAAAGAGAAATTTCTCAAAGAAGAAGCAAGGTCTCATCAGAATCTACTCAAAGGTCAGCCGAGTCGAATGCTGTGAAGTGTTTACAGGGACAATCTTTGAACAAAAGCTGGAATGGAGCACCGGAAACATCTGTTAAGTCTCCTACACACGCAGAAGAAGATTCTTCTTTGAATAATAAAGGGAAGTCTGTTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAATTTGATGGGCCAAAAAGAGCATCTCGACATGAAATCCAATCAACCACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTCAGGCAGAATAATCTGAAACAGAACCATTCAATTGATAATAATGACAAATCAGTACCATCTAAGCCATTGGTTTCCAACTCGCAAGGTAGAAAAGTTACGACTGGAGATTCCTCTTATGGACGGCATAGAAGCTCAAGTGGTAAATCCATTGTAAAATCTAAAGTCGGATCGAAAAAGTCAGCTGTGGAGGTAACCGATAGCGAAAATGAAATTCTATACACCAGGACAAATAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAACGATAGAGTTGTTGATAATTTGTTCATTGACAAAACTCAGAAGCCAGCGAAGTCAAATCTAGTGAGTAATAAACAATATGGTGGGACTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCTTTCACATTCACTACACCATTAACAAGGAGCAGCAATCCAGGTTCTGTGACACCTCGACAAGGTGGAAAGAATACTAATGATCTTTCGTTGGATCAACGCATTAAAAGAGTGTTGCTTGATACAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGCGGCGATGCCTTAGGTATCCTTTTAGAACAGAAGTTGAGGGAATTGACAAGTGGAGTTGAAACCTCTTCCAATGATGTTTCTAAAGTTAACCTCAATCTAGGATTGCAACAGAAGAAAGATCAAGATATGTCGTTTACGGACAGTTTAAACAGTAGCTGTGGTTCTAACATATCATCCTTGACCAATCTTCCAGAATCATCATTGAAACATAAATCATGGGTACGTCACAATCTCACCATATTTAAGTGATTATTATCTCTTAAGCATGTCAATATGAGTAGTATAATGTCATCAGTTTAATGGCTAAAACCATAAACAAAAAGTTAGGCCTGCTAAATTTATACTTTTTGATGGCATTGAAAATACCAAAAATTATTGAATAATCACTCTTTTATTAATTGGTGGCATTTTCGCTATGCTTTTCTTCCATTAAGTAAGTCATTAACTCAAAGATGTTTGCAGGGTGATGAGATGGAACCTCTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCTTCATTTTCGGTTGAAAGCTGTGAATCCTCGATGAGCACGGATGTTATCAGTGCAGAAGGTAAGTCATGCTTAAAAAGTTACTGTTGTTTGGTAGTTATTTAATTTAATGACACATGAGTGGTAATTTTTTTACTGTATATATTTTTCAGGAAGCAAGATGTTTTCATCTATTCAATCTCAAGAAATCCATGGATTTAATTTTTCAAGGAAGTTCTATCCTACTGAATCTGATGCAGAGTTATCCGACTCAGCTTCTTCAACATCAACTAGGACTATGATAAAGAAGCAGACAGGTACATTTTCTATGATGAAGTTTGGTAGATCATCAACTACATGGGAGCTAGACTATGTGAAAGAGATATTGTGCAATGTAGAGTTAATGTATATGGATTTTTCCCTCGGCCGATCTCGCGAGGTTGTGAACTCTCATCTATTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGCGACGATGAATCAAGGATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTATGGATTTGAGATGTAGAAGTTATGTTGGTGGAGGATACAAAATGTGGACAAAAGGGTTTGAAATGGTGAAAAGAAAAGACTGGTTGGCAAAAGATGTGTATAAGGAAATTTTGAGTTTGAAAGGGATGAGAGATTCAATGGTTGATGAGCTTGTGGATAAGGATATGAGTAGCCAATATGGAAAGTGGTTGGATTATGAGGTTGATGCTTATGAATTTGGAGAAGAAGTTGTTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGAAATGTTGCAATTTTAA
Protein sequence

>MS.gene51426.t1

SLUNRKENPTTMWQUDIPIWSMKTKMVLGNMLEEAVIIVMLHLLQVMTHVEQELLMULQGLWDUILCLLPVSRIPTRRHFLIHDPFKILSFYILESWLKKLRDLLAISWSQSLKRLLLDQLKSFKEKYCLQNRQDQFLLHTINFCPLLRIPVLFHPTILLIUWRLPQEFLNLGPPKQRLKRIWHHRRSHUGLKILEIRWTLRRKDLLLRHLQULLGLGSUKKKEKFLKEEARSHQNLLKGQPSRMLUSVYRDNLUTKAGMEHRKHLLSLLHTQKKILLUIIKGSLFHLQSKQKUMFKEGKVUVRPVAEIUWAKKSISTUNPINHLRQMLRKICIGNLLARILLMFSGRIIUNRTIQLIIMTNQYHLSHWFPTRKVEKLRLEIPLMDGIEAQVVNPLUNLKSDRKSQLWRUPIAKMKFYTPGQIIFLERKGLQTRTGTIELLIICSLTKLRSQRSQIUUVINNMVGLKKUKRKTWMUFLSHSLHHUQGAAIQVLUHLDKVERILMIFRWINALKECCLIQTIQGLQUDTMULAAMPUVSFUNRSUGNUQVELKPLPMMFLKLTSIUDCNRRKIKICRLRTVUTVAVVLTYHPUPIFQNHHUNINHGVMRWNLCHSIADNQVQSQFLSLHFRLKAVNPRUARMLSVQKEARCFHLFNLKKSMDLIFQGSSILLNLMQSYPTQLLQHQLGLUURSRQVHFLUUSLVDHQLHGSUTMUKRYCAMUSUCIWIFPSADLARLUTLIYSTSWKAEREVSRATMNQGUKGKLYLIVUVNVWIUDVEVMLVEDTKCGQKGLKWUKEKTGWQKMCIRKFUVUKGUEIQWLMSLWIRIUVANMESGWIMRLMLMNLEKKLLIKYLILWLMMLSMKCCNF