Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52002.t1 | XP_003625428.1 | 85.6 | 625 | 63 | 2 | 1 | 599 | 1 | 624 | 1.70E-224 | 788.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52002.t1 | Q9C950 | 56.9 | 529 | 218 | 6 | 76 | 599 | 120 | 643 | 3.1e-134 | 480.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52002.t1 | G7KYI5 | 85.6 | 625 | 63 | 2 | 1 | 599 | 1 | 624 | 1.2e-224 | 788.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene52002 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene049801 | MS.gene52002 | 0.829368 | 5.35E-55 | -1.69E-46 |
| MS.gene050084 | MS.gene52002 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene52002 | 0.824713 | 6.96E-54 | -1.69E-46 |
| MS.gene050361 | MS.gene52002 | 0.848591 | 5.56E-60 | -1.69E-46 |
| MS.gene050654 | MS.gene52002 | 0.827214 | 1.77E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene52002 | 0.810008 | 1.43E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene52002 | 0.811317 | 7.44E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene52002 | 0.809995 | 1.44E-50 | -1.69E-46 |
| MS.gene051381 | MS.gene52002 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene52002 | 0.802009 | 6.87E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene52002 | 0.808658 | 2.78E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene52002 | 0.804838 | 1.78E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene52002 | 0.803064 | 4.17E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene52002 | 0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene52002 | 0.803416 | 3.52E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene52002 | 0.831661 | 1.47E-55 | -1.69E-46 |
| MS.gene057392 | MS.gene52002 | 0.813282 | 2.77E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene52002 | 0.823044 | 1.71E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene52002 | 0.831577 | 1.54E-55 | -1.69E-46 |
| MS.gene058054 | MS.gene52002 | 0.824345 | 8.49E-54 | -1.69E-46 |
| MS.gene058055 | MS.gene52002 | 0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene058399 | MS.gene52002 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene52002 | 0.821407 | 4.11E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene52002 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene52002 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene52002 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene52002 | 0.804087 | 2.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52002.t1 | MTR_7g099060 | 89.600 | 625 | 38 | 2 | 1 | 599 | 1 | 624 | 0.0 | 1019 |
| MS.gene52002.t1 | MTR_4g089070 | 64.079 | 657 | 176 | 8 | 1 | 599 | 1 | 655 | 0.0 | 775 |
| MS.gene52002.t1 | MTR_4g032885 | 49.398 | 664 | 254 | 11 | 1 | 599 | 1 | 647 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52002.t1 | AT1G61040 | 63.139 | 567 | 195 | 8 | 40 | 599 | 84 | 643 | 0.0 | 630 |
| MS.gene52002.t1 | AT1G61040 | 63.139 | 567 | 195 | 8 | 40 | 599 | 84 | 643 | 0.0 | 630 |
| MS.gene52002.t1 | AT1G61040 | 63.139 | 567 | 195 | 8 | 40 | 599 | 84 | 643 | 0.0 | 630 |
Find 155 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTTACAAAATGGTTTA+TGG | 0.170699 | 3.3:+6325880 | MS.gene52002:CDS |
| CGTCCTTCTCCCGAGATTTC+CGG | 0.188455 | 3.3:-6326426 | None:intergenic |
| GGGAGTTCAGGCAGGGTTTA+TGG | 0.216936 | 3.3:+6326849 | MS.gene52002:CDS |
| AAAGAGGGGTCTAAAATTTC+AGG | 0.225292 | 3.3:+6325656 | MS.gene52002:CDS |
| TGGCTTGAGCTACTGAAATT+AGG | 0.237330 | 3.3:-6325707 | None:intergenic |
| GCTTTCAATGCTTTATTAAC+TGG | 0.248153 | 3.3:-6326523 | None:intergenic |
| TGCCACATTGCTAGCGATAT+TGG | 0.272264 | 3.3:-6326808 | None:intergenic |
| CAAGGTCAAAACTTACAAAA+TGG | 0.282281 | 3.3:+6325873 | MS.gene52002:CDS |
| CAGAGAATTGAAGAAGTTGT+TGG | 0.303542 | 3.3:+6326880 | MS.gene52002:CDS |
| TTCTCAGCTGCAACATTTAG+TGG | 0.306966 | 3.3:-6326307 | None:intergenic |
| GTCCTTCTCCCGAGATTTCC+GGG | 0.324137 | 3.3:-6326425 | None:intergenic |
| TGGTGGAGCGCAGGGAGTTC+AGG | 0.326248 | 3.3:+6326837 | MS.gene52002:CDS |
| GACGGCCACTGCCGAGGCTT+TGG | 0.334682 | 3.3:+6326696 | MS.gene52002:CDS |
| TGATTGTTGGTTGTTTCGTT+AGG | 0.335264 | 3.3:+6325921 | MS.gene52002:CDS |
| GAGGCTTTGGAAGCTGCTGC+TGG | 0.336521 | 3.3:+6326709 | MS.gene52002:CDS |
| CTCACGCTTGGATGCTATCT+TGG | 0.336928 | 3.3:-6325471 | None:intergenic |
| TTGGAAGCTGCTGCTGGTGC+TGG | 0.337203 | 3.3:+6326715 | MS.gene52002:CDS |
| CTAGTCCATCTCCTTGAAAA+AGG | 0.345767 | 3.3:-6326565 | None:intergenic |
| TCTAATTTATACAGTCGATT+AGG | 0.352085 | 3.3:-6326016 | None:intergenic |
| TGATTTAGAAAATGACCTTT+TGG | 0.354336 | 3.3:+6325193 | MS.gene52002:CDS |
| TTCAGCTCGCGATGTGCTTC+CGG | 0.380178 | 3.3:-6325635 | None:intergenic |
| GACTCTGTTCCTTCATCCAC+TGG | 0.384610 | 3.3:-6326760 | None:intergenic |
| CCAGACAAAACTGCAAGAAT+TGG | 0.386133 | 3.3:+6326396 | MS.gene52002:CDS |
| CTCTTCTAACATCTGCTTCA+CGG | 0.393437 | 3.3:-6326263 | None:intergenic |
| CTGAGATGAACAGAAAGAAC+AGG | 0.394551 | 3.3:+6326467 | MS.gene52002:CDS |
| ACCTACTTTCACTTTCACTA+TGG | 0.405201 | 3.3:-6325727 | None:intergenic |
| GGAGCGCAGGGAGTTCAGGC+AGG | 0.411409 | 3.3:+6326841 | MS.gene52002:CDS |
| GCAGCTGGAAATAATACTTC+TGG | 0.411995 | 3.3:+6326628 | MS.gene52002:CDS |
| TCTGGTGGTGCAGTGGGTGA+TGG | 0.416049 | 3.3:+6326646 | MS.gene52002:CDS |
| ACAAGTACTTGAATGTTGTC+TGG | 0.416298 | 3.3:+6326053 | MS.gene52002:CDS |
| TGTTTCGTTAGGGTTGGTAT+TGG | 0.420135 | 3.3:+6325932 | MS.gene52002:CDS |
| TACATTTCCCTTCTCACGCT+TGG | 0.421650 | 3.3:-6325483 | None:intergenic |
| CTCTGCTGCGAGGTGGCAAA+TGG | 0.421789 | 3.3:+6326087 | MS.gene52002:CDS |
| GGACCGGTTGAAAAGGGAAT+TGG | 0.431061 | 3.3:+6326330 | MS.gene52002:CDS |
| GGGTCTAAAATTTCAGGATC+AGG | 0.435083 | 3.3:+6325662 | MS.gene52002:CDS |
| CCAGCTGCAGCCTCTTCAGC+CGG | 0.436278 | 3.3:-6326613 | None:intergenic |
| CTGAGAAGGACCGGTTGAAA+AGG | 0.436446 | 3.3:+6326323 | MS.gene52002:CDS |
| GATGGAGGCTGCAATGGGAT+TGG | 0.437943 | 3.3:+6326664 | MS.gene52002:CDS |
| GTCTGATAGGGCTGCTAAGA+AGG | 0.438794 | 3.3:+6325430 | MS.gene52002:CDS |
| GGAGTTTAAACAGTGGGTTA+AGG | 0.439170 | 3.3:+6326141 | MS.gene52002:CDS |
| CTAGCAATGTGGCAAAAGTT+TGG | 0.440126 | 3.3:+6326817 | MS.gene52002:CDS |
| GTTGGTTGTTTCGTTAGGGT+TGG | 0.442169 | 3.3:+6325926 | MS.gene52002:CDS |
| TCGTTAGGGTTGGTATTGGC+AGG | 0.445479 | 3.3:+6325936 | MS.gene52002:CDS |
| GCATTGAAAGCAGGGGAGGC+AGG | 0.447530 | 3.3:+6326535 | MS.gene52002:CDS |
| AAATTAGGTTTCCCTATTTG+CGG | 0.450487 | 3.3:-6325692 | None:intergenic |
| GTTAATAAAGCATTGAAAGC+AGG | 0.455533 | 3.3:+6326526 | MS.gene52002:CDS |
| TGGAGGAATCCCGGAAATCT+CGG | 0.458345 | 3.3:+6326416 | MS.gene52002:CDS |
| CAAAGACTGGGCCTATCTAC+AGG | 0.458836 | 3.3:+6325960 | MS.gene52002:CDS |
| CCGGCTGAAGAGGCTGCAGC+TGG | 0.464826 | 3.3:+6326613 | MS.gene52002:CDS |
| TTCTGACAGGTCAGCTGCTA+AGG | 0.465616 | 3.3:+6325565 | MS.gene52002:CDS |
| CTCAGAAAGCCTCAGAGCCT+TGG | 0.470974 | 3.3:-6326449 | None:intergenic |
| GAACTACTATAATTCAAAAC+CGG | 0.473536 | 3.3:+6326594 | MS.gene52002:CDS |
| ATTTGAAAAGCCATCGTTTG+AGG | 0.474055 | 3.3:+6325829 | MS.gene52002:CDS |
| GCAAAAGTTTGGTGGAGCGC+AGG | 0.478459 | 3.3:+6326828 | MS.gene52002:CDS |
| GATTGTTGGTTGTTTCGTTA+GGG | 0.478505 | 3.3:+6325922 | MS.gene52002:CDS |
| GTGGGTGATGGAGGCTGCAA+TGG | 0.479445 | 3.3:+6326658 | MS.gene52002:CDS |
| GCCTATCTACAGGCTCTGTA+TGG | 0.481256 | 3.3:+6325970 | MS.gene52002:CDS |
| AGCAGCAGCTTCCAAAGCCT+CGG | 0.484282 | 3.3:-6326707 | None:intergenic |
| GGTATTGGCAGGTCAAAGAC+TGG | 0.484693 | 3.3:+6325947 | MS.gene52002:CDS |
| CAAGGAGATGGACTAGATCA+AGG | 0.488397 | 3.3:+6326572 | MS.gene52002:CDS |
| ATCAGAGTCATCATCGTCTC+CGG | 0.491148 | 3.3:-6325276 | None:intergenic |
| GTTCTGACCGTGAGGTGGAC+AGG | 0.495463 | 3.3:+6325312 | MS.gene52002:CDS |
| CAAGTACTTGAATGTTGTCT+GGG | 0.495702 | 3.3:+6326054 | MS.gene52002:CDS |
| CGAGAAGACGGAAGAGGAGG+CGG | 0.500413 | 3.3:-6325521 | None:intergenic |
| GGCTGCAATGGGATTGGAGC+TGG | 0.501509 | 3.3:+6326670 | MS.gene52002:CDS |
| AACATTCAAGTACTTGTATG+TGG | 0.501552 | 3.3:-6326047 | None:intergenic |
| GTTTAAACTCCTCCTCAAGC+GGG | 0.503277 | 3.3:-6326129 | None:intergenic |
| ACCATACAGAGCCTGTAGAT+AGG | 0.505421 | 3.3:-6325971 | None:intergenic |
| TGCAAGAATTGGAGGAATCC+CGG | 0.506961 | 3.3:+6326407 | MS.gene52002:CDS |
| AGCTTCCAAAGCCTCGGCAG+TGG | 0.512251 | 3.3:-6326701 | None:intergenic |
| TGCTGCTGGTGCTGGAAAGT+TGG | 0.516833 | 3.3:+6326723 | MS.gene52002:CDS |
| CTTCAACATCCTCGTCACTA+CGG | 0.517935 | 3.3:-6325751 | None:intergenic |
| GAAGCTTTGTCTGAAAATGA+AGG | 0.519185 | 3.3:+6325770 | MS.gene52002:CDS |
| CGATGATCTTTACAAGGATG+AGG | 0.522524 | 3.3:+6325355 | MS.gene52002:CDS |
| GACAAAACTGCAAGAATTGG+AGG | 0.524371 | 3.3:+6326399 | MS.gene52002:CDS |
| TTCAACATCCTCGTCACTAC+GGG | 0.525338 | 3.3:-6325750 | None:intergenic |
| TGAGAAGGACCGGTTGAAAA+GGG | 0.526022 | 3.3:+6326324 | MS.gene52002:CDS |
| GGAGGAATCCCGGAAATCTC+GGG | 0.526557 | 3.3:+6326417 | MS.gene52002:CDS |
| TGGGTGATGGAGGCTGCAAT+GGG | 0.529895 | 3.3:+6326659 | MS.gene52002:CDS |
| TTAATAAAGCATTGAAAGCA+GGG | 0.529926 | 3.3:+6326527 | MS.gene52002:CDS |
| GGTGGTGCAGTGGGTGATGG+AGG | 0.534826 | 3.3:+6326649 | MS.gene52002:CDS |
| AAGCTTTGTCTGAAAATGAA+GGG | 0.535182 | 3.3:+6325771 | MS.gene52002:CDS |
| TAATTCAAAACCGGCTGAAG+AGG | 0.535280 | 3.3:+6326603 | MS.gene52002:CDS |
| TGTCTGGATCTTCTCTACTC+CGG | 0.540198 | 3.3:-6326380 | None:intergenic |
| ATGTTGCAGCTGAGAAGGAC+CGG | 0.542009 | 3.3:+6326314 | MS.gene52002:CDS |
| ACTAAATGTTGCAGCTGAGA+AGG | 0.543890 | 3.3:+6326309 | MS.gene52002:CDS |
| TGAGGAGGAGTTTAAACAGT+GGG | 0.546108 | 3.3:+6326135 | MS.gene52002:CDS |
| TGAATGAACTGCGTGCTAAG+AGG | 0.547152 | 3.3:+6325597 | MS.gene52002:CDS |
| AGCACATCGCGAGCTGAAAG+AGG | 0.547212 | 3.3:+6325640 | MS.gene52002:CDS |
| GAGCGCAGGGAGTTCAGGCA+GGG | 0.549229 | 3.3:+6326842 | MS.gene52002:CDS |
| ATCCCGGAAATCTCGGGAGA+AGG | 0.549427 | 3.3:+6326423 | MS.gene52002:CDS |
| GATAGCATCCAAGCGTGAGA+AGG | 0.551586 | 3.3:+6325475 | MS.gene52002:CDS |
| GAGGCTGAAACAGCGAGAGC+CGG | 0.553800 | 3.3:+6325616 | MS.gene52002:CDS |
| TTATACCAGCAGCCTCCAAA+AGG | 0.555238 | 3.3:-6325208 | None:intergenic |
| TGGTATGACGGCCACTGCCG+AGG | 0.559819 | 3.3:+6326690 | MS.gene52002:CDS |
| ATAGCATCCAAGCGTGAGAA+GGG | 0.562319 | 3.3:+6325476 | MS.gene52002:CDS |
| AAGTAGAGCGAAGTGGTGGC+CGG | 0.562543 | 3.3:+6326164 | MS.gene52002:CDS |
| GGTGATTACAAGAGAAGAAG+AGG | 0.564356 | 3.3:+6326955 | MS.gene52002:CDS |
| CATCTAGCCTCTTCAGCATC+CGG | 0.564400 | 3.3:-6326183 | None:intergenic |
| GAAAGCAAGAACGATGCAGC+CGG | 0.567987 | 3.3:+6326361 | MS.gene52002:CDS |
| CATTTGCCACCTCGCAGCAG+AGG | 0.570644 | 3.3:-6326086 | None:intergenic |
| ACAAGAGCTCCAGTGGATGA+AGG | 0.572277 | 3.3:+6326751 | MS.gene52002:CDS |
| GTGGTGGCCGGATGCTGAAG+AGG | 0.573366 | 3.3:+6326176 | MS.gene52002:CDS |
| GACAGGTCAGCTGCTAAGGA+TGG | 0.574292 | 3.3:+6325569 | MS.gene52002:CDS |
| CAAAAGTTTGGTGGAGCGCA+GGG | 0.575970 | 3.3:+6326829 | MS.gene52002:CDS |
| GATGATGACAAGATAATGCC+TGG | 0.576356 | 3.3:+6325806 | MS.gene52002:CDS |
| GCAATGTGGCAAAAGTTTGG+TGG | 0.581264 | 3.3:+6326820 | MS.gene52002:CDS |
| ATCACACGAGAAGACGGAAG+AGG | 0.585226 | 3.3:-6325527 | None:intergenic |
| GCCATAGTGAAAGTGAAAGT+AGG | 0.587909 | 3.3:+6325726 | MS.gene52002:CDS |
| GCACATCGCGAGCTGAAAGA+GGG | 0.588648 | 3.3:+6325641 | MS.gene52002:CDS |
| TGTTTAAACTCCTCCTCAAG+CGG | 0.589955 | 3.3:-6326130 | None:intergenic |
| ATCTCGGGAGAAGGACGCCA+AGG | 0.590489 | 3.3:+6326432 | MS.gene52002:CDS |
| GGTCTAAAATTTCAGGATCA+GGG | 0.591143 | 3.3:+6325663 | MS.gene52002:CDS |
| AATACTTCTGGTGGTGCAGT+GGG | 0.597159 | 3.3:+6326640 | MS.gene52002:CDS |
| TAAAAGAAATCACCATTCCA+AGG | 0.599048 | 3.3:+6325855 | MS.gene52002:CDS |
| TGCGAGGTGGCAAATGGCCA+TGG | 0.599400 | 3.3:+6326093 | MS.gene52002:CDS |
| AGGAGTGATGAATCTGATGT+TGG | 0.600216 | 3.3:+6325332 | MS.gene52002:CDS |
| CATCTACTAGATCTTCTGAC+AGG | 0.600420 | 3.3:+6325552 | MS.gene52002:CDS |
| TGTTGGCGATGATCTTTACA+AGG | 0.605036 | 3.3:+6325349 | MS.gene52002:CDS |
| TGGGATTGGAGCTGGTATGA+CGG | 0.607971 | 3.3:+6326678 | MS.gene52002:CDS |
| GATGACATCACACGAGAAGA+CGG | 0.608285 | 3.3:-6325533 | None:intergenic |
| TTTAAACTCCTCCTCAAGCG+GGG | 0.608619 | 3.3:-6326128 | None:intergenic |
| GTCTAAAATTTCAGGATCAG+GGG | 0.613225 | 3.3:+6325664 | MS.gene52002:CDS |
| TAATACTTCTGGTGGTGCAG+TGG | 0.614229 | 3.3:+6326639 | MS.gene52002:CDS |
| GAGTCCCAGAAAACGATGGA+AGG | 0.614728 | 3.3:+6326908 | MS.gene52002:CDS |
| ACACGAGAAGACGGAAGAGG+AGG | 0.615894 | 3.3:-6325524 | None:intergenic |
| GGTAGACACAAGAGCTCCAG+TGG | 0.616107 | 3.3:+6326744 | MS.gene52002:CDS |
| AGAAGGACGCCAAGGCTCTG+AGG | 0.617944 | 3.3:+6326440 | MS.gene52002:CDS |
| GCTGAAGAGGCTAGATGTGG+TGG | 0.622446 | 3.3:+6326189 | MS.gene52002:CDS |
| TCTAAAATTTCAGGATCAGG+GGG | 0.625310 | 3.3:+6325665 | MS.gene52002:CDS |
| TAAAGCATTGAAAGCAGGGG+AGG | 0.625312 | 3.3:+6326531 | MS.gene52002:CDS |
| GATGACTCTGATGATGATGA+TGG | 0.630460 | 3.3:+6325287 | MS.gene52002:CDS |
| CATCACTCCTGTCCACCTCA+CGG | 0.632979 | 3.3:-6325319 | None:intergenic |
| GTATTGGCAGGTCAAAGACT+GGG | 0.637870 | 3.3:+6325948 | MS.gene52002:CDS |
| CATCAGCTGACATTAACAGT+TGG | 0.642633 | 3.3:+6326934 | MS.gene52002:CDS |
| CACATCGCGAGCTGAAAGAG+GGG | 0.647083 | 3.3:+6325642 | MS.gene52002:CDS |
| ATGAGACCTCTGCTGCGAGG+TGG | 0.647938 | 3.3:+6326080 | MS.gene52002:CDS |
| AAGTAGGTCCCGTAGTGACG+AGG | 0.658216 | 3.3:+6325742 | MS.gene52002:CDS |
| TAATAAAGCATTGAAAGCAG+GGG | 0.659215 | 3.3:+6326528 | MS.gene52002:CDS |
| ATACAGTCGATTAGGATCCG+AGG | 0.660349 | 3.3:-6326008 | None:intergenic |
| GTGATTACAAGAGAAGAAGA+GGG | 0.663120 | 3.3:+6326956 | MS.gene52002:CDS |
| AAGGAAGTAGAGCGAAGTGG+TGG | 0.663190 | 3.3:+6326160 | MS.gene52002:CDS |
| TTAAACTCCTCCTCAAGCGG+GGG | 0.674132 | 3.3:-6326127 | None:intergenic |
| GTTAAGGAAGTAGAGCGAAG+TGG | 0.674298 | 3.3:+6326157 | MS.gene52002:CDS |
| TGGTGGTTCTGACCGTGAGG+TGG | 0.679830 | 3.3:+6325307 | MS.gene52002:CDS |
| GACTCTGATGATGATGATGG+TGG | 0.686524 | 3.3:+6325290 | MS.gene52002:CDS |
| TTTCGAGTCCCAGAAAACGA+TGG | 0.687907 | 3.3:+6326904 | MS.gene52002:CDS |
| AAGTACTTGAATGTTGTCTG+GGG | 0.689030 | 3.3:+6326055 | MS.gene52002:CDS |
| TTGAGGAGGAGTTTAAACAG+TGG | 0.689149 | 3.3:+6326134 | MS.gene52002:CDS |
| TGCCAATATCGCTAGCAATG+TGG | 0.691084 | 3.3:+6326806 | MS.gene52002:CDS |
| GCTGGAAATAATACTTCTGG+TGG | 0.697224 | 3.3:+6326631 | MS.gene52002:CDS |
| TTCTAACATCTGCTTCACGG+TGG | 0.711073 | 3.3:-6326260 | None:intergenic |
| GATGCTGAAGAGGCTAGATG+TGG | 0.716515 | 3.3:+6326186 | MS.gene52002:CDS |
| GAAATGAGACCTCTGCTGCG+AGG | 0.717415 | 3.3:+6326077 | MS.gene52002:CDS |
| TGATGGTGGTTCTGACCGTG+AGG | 0.756865 | 3.3:+6325304 | MS.gene52002:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATCAATTTTTTGATTC+CGG | + | chr3.3:6325257-6325276 | MS.gene52002:CDS | 15.0% |
| !!! | AAAAATTGATTTTTTGATGA+AGG | - | chr3.3:6325251-6325270 | None:intergenic | 15.0% |
| !! | AAAACTTACAAAATGGTTTA+TGG | + | chr3.3:6325880-6325899 | MS.gene52002:CDS | 20.0% |
| ! | GAACTACTATAATTCAAAAC+CGG | + | chr3.3:6326594-6326613 | MS.gene52002:CDS | 25.0% |
| ! | TCTAATTTATACAGTCGATT+AGG | - | chr3.3:6326019-6326038 | None:intergenic | 25.0% |
| !! | TGATTTAGAAAATGACCTTT+TGG | + | chr3.3:6325193-6325212 | MS.gene52002:CDS | 25.0% |
| !!! | AATTGATTTTTTGATGAAGG+TGG | - | chr3.3:6325248-6325267 | None:intergenic | 25.0% |
| !!! | ATTGATTTTTTGATGAAGGT+GGG | - | chr3.3:6325247-6325266 | None:intergenic | 25.0% |
| !!! | TTAATAAAGCATTGAAAGCA+GGG | + | chr3.3:6326527-6326546 | MS.gene52002:CDS | 25.0% |
| AAATTAGGTTTCCCTATTTG+CGG | - | chr3.3:6325695-6325714 | None:intergenic | 30.0% | |
| AACAATCAACTCCTCAAAAA+AGG | - | chr3.3:6325909-6325928 | None:intergenic | 30.0% | |
| AACATTCAAGTACTTGTATG+TGG | - | chr3.3:6326050-6326069 | None:intergenic | 30.0% | |
| AAGAGAAAAAATCTATCTCG+CGG | + | chr3.3:6326281-6326300 | MS.gene52002:CDS | 30.0% | |
| ACAATCAACTCCTCAAAAAA+GGG | - | chr3.3:6325908-6325927 | None:intergenic | 30.0% | |
| CAAGGTCAAAACTTACAAAA+TGG | + | chr3.3:6325873-6325892 | MS.gene52002:CDS | 30.0% | |
| TAAAAGAAATCACCATTCCA+AGG | + | chr3.3:6325855-6325874 | MS.gene52002:CDS | 30.0% | |
| ! | AAGCTTTGTCTGAAAATGAA+GGG | + | chr3.3:6325771-6325790 | MS.gene52002:CDS | 30.0% |
| ! | AGAGATGATTTTGTCTGATA+GGG | + | chr3.3:6325418-6325437 | MS.gene52002:CDS | 30.0% |
| ! | GCTTTCAATGCTTTATTAAC+TGG | - | chr3.3:6326526-6326545 | None:intergenic | 30.0% |
| ! | TTTAGAAAATGACCTTTTGG+AGG | + | chr3.3:6325196-6325215 | MS.gene52002:CDS | 30.0% |
| !! | CATTTTGTAAGTTTTGACCT+TGG | - | chr3.3:6325875-6325894 | None:intergenic | 30.0% |
| !! | GTTAATAAAGCATTGAAAGC+AGG | + | chr3.3:6326526-6326545 | MS.gene52002:CDS | 30.0% |
| !! | TAATAAAGCATTGAAAGCAG+GGG | + | chr3.3:6326528-6326547 | MS.gene52002:CDS | 30.0% |
| !!! | TTTTTTGAGGAGTTGATTGT+TGG | + | chr3.3:6325908-6325927 | MS.gene52002:CDS | 30.0% |
| AAGTACTTGAATGTTGTCTG+GGG | + | chr3.3:6326055-6326074 | MS.gene52002:CDS | 35.0% | |
| ACAAGTACTTGAATGTTGTC+TGG | + | chr3.3:6326053-6326072 | MS.gene52002:CDS | 35.0% | |
| ACCTACTTTCACTTTCACTA+TGG | - | chr3.3:6325730-6325749 | None:intergenic | 35.0% | |
| ATTTGAAAAGCCATCGTTTG+AGG | + | chr3.3:6325829-6325848 | MS.gene52002:CDS | 35.0% | |
| CAAGTACTTGAATGTTGTCT+GGG | + | chr3.3:6326054-6326073 | MS.gene52002:CDS | 35.0% | |
| CAGAGAATTGAAGAAGTTGT+TGG | + | chr3.3:6326880-6326899 | MS.gene52002:CDS | 35.0% | |
| GTGATTACAAGAGAAGAAGA+GGG | + | chr3.3:6326956-6326975 | MS.gene52002:CDS | 35.0% | |
| ! | AAAGAGGGGTCTAAAATTTC+AGG | + | chr3.3:6325656-6325675 | MS.gene52002:CDS | 35.0% |
| ! | GAAGCTTTGTCTGAAAATGA+AGG | + | chr3.3:6325770-6325789 | MS.gene52002:CDS | 35.0% |
| ! | GAGAGATGATTTTGTCTGAT+AGG | + | chr3.3:6325417-6325436 | MS.gene52002:CDS | 35.0% |
| ! | GATTGTTGGTTGTTTCGTTA+GGG | + | chr3.3:6325922-6325941 | MS.gene52002:CDS | 35.0% |
| ! | GGTCTAAAATTTCAGGATCA+GGG | + | chr3.3:6325663-6325682 | MS.gene52002:CDS | 35.0% |
| ! | GTCTAAAATTTCAGGATCAG+GGG | + | chr3.3:6325664-6325683 | MS.gene52002:CDS | 35.0% |
| ! | TCTAAAATTTCAGGATCAGG+GGG | + | chr3.3:6325665-6325684 | MS.gene52002:CDS | 35.0% |
| ! | TCTTTTATGTCCTCAAACGA+TGG | - | chr3.3:6325842-6325861 | None:intergenic | 35.0% |
| ! | TGATTGTTGGTTGTTTCGTT+AGG | + | chr3.3:6325921-6325940 | MS.gene52002:CDS | 35.0% |
| ! | TTTCCAATTCCCTTTTCAAC+CGG | - | chr3.3:6326336-6326355 | None:intergenic | 35.0% |
| !! | CAGGTTATGATCCTTTTTCA+AGG | + | chr3.3:6326554-6326573 | MS.gene52002:CDS | 35.0% |
| !! | TGTAAGTTTTGACCTTGGAA+TGG | - | chr3.3:6325870-6325889 | None:intergenic | 35.0% |
| !!! | ATGATCCTTTTTCAAGGAGA+TGG | + | chr3.3:6326560-6326579 | MS.gene52002:CDS | 35.0% |
| ACTAAATGTTGCAGCTGAGA+AGG | + | chr3.3:6326309-6326328 | MS.gene52002:CDS | 40.0% | |
| AGAAAAAATCTATCTCGCGG+AGG | + | chr3.3:6326284-6326303 | MS.gene52002:CDS | 40.0% | |
| AGGAGTGATGAATCTGATGT+TGG | + | chr3.3:6325332-6325351 | MS.gene52002:CDS | 40.0% | |
| CATCAGCTGACATTAACAGT+TGG | + | chr3.3:6326934-6326953 | MS.gene52002:CDS | 40.0% | |
| CATCTACTAGATCTTCTGAC+AGG | + | chr3.3:6325552-6325571 | MS.gene52002:CDS | 40.0% | |
| CCAGACAAAACTGCAAGAAT+TGG | + | chr3.3:6326396-6326415 | MS.gene52002:CDS | 40.0% | |
| CGATGATCTTTACAAGGATG+AGG | + | chr3.3:6325355-6325374 | MS.gene52002:CDS | 40.0% | |
| CTAGCAATGTGGCAAAAGTT+TGG | + | chr3.3:6326817-6326836 | MS.gene52002:CDS | 40.0% | |
| CTAGTCCATCTCCTTGAAAA+AGG | - | chr3.3:6326568-6326587 | None:intergenic | 40.0% | |
| CTCTTCTAACATCTGCTTCA+CGG | - | chr3.3:6326266-6326285 | None:intergenic | 40.0% | |
| CTGAGATGAACAGAAAGAAC+AGG | + | chr3.3:6326467-6326486 | MS.gene52002:CDS | 40.0% | |
| GACAAAACTGCAAGAATTGG+AGG | + | chr3.3:6326399-6326418 | MS.gene52002:CDS | 40.0% | |
| GATGATGACAAGATAATGCC+TGG | + | chr3.3:6325806-6325825 | MS.gene52002:CDS | 40.0% | |
| GCAGCTGGAAATAATACTTC+TGG | + | chr3.3:6326628-6326647 | MS.gene52002:CDS | 40.0% | |
| GCCATAGTGAAAGTGAAAGT+AGG | + | chr3.3:6325726-6325745 | MS.gene52002:CDS | 40.0% | |
| GCTGGAAATAATACTTCTGG+TGG | + | chr3.3:6326631-6326650 | MS.gene52002:CDS | 40.0% | |
| GGTGAAAAATGTTGATGCCT+CGG | + | chr3.3:6325991-6326010 | MS.gene52002:CDS | 40.0% | |
| GGTGATTACAAGAGAAGAAG+AGG | + | chr3.3:6326955-6326974 | MS.gene52002:CDS | 40.0% | |
| TAATTCAAAACCGGCTGAAG+AGG | + | chr3.3:6326603-6326622 | MS.gene52002:CDS | 40.0% | |
| TGAGGAGGAGTTTAAACAGT+GGG | + | chr3.3:6326135-6326154 | MS.gene52002:CDS | 40.0% | |
| TGGCTTGAGCTACTGAAATT+AGG | - | chr3.3:6325710-6325729 | None:intergenic | 40.0% | |
| TGTTGGCGATGATCTTTACA+AGG | + | chr3.3:6325349-6325368 | MS.gene52002:CDS | 40.0% | |
| TGTTTAAACTCCTCCTCAAG+CGG | - | chr3.3:6326133-6326152 | None:intergenic | 40.0% | |
| TTCTCAGCTGCAACATTTAG+TGG | - | chr3.3:6326310-6326329 | None:intergenic | 40.0% | |
| TTGAGGAGGAGTTTAAACAG+TGG | + | chr3.3:6326134-6326153 | MS.gene52002:CDS | 40.0% | |
| ! | AACGATGGCTTTTCAAATCC+AGG | - | chr3.3:6325827-6325846 | None:intergenic | 40.0% |
| ! | GATGACTCTGATGATGATGA+TGG | + | chr3.3:6325287-6325306 | MS.gene52002:CDS | 40.0% |
| ! | GGGTCTAAAATTTCAGGATC+AGG | + | chr3.3:6325662-6325681 | MS.gene52002:CDS | 40.0% |
| !! | CCAATTCTTGCAGTTTTGTC+TGG | - | chr3.3:6326399-6326418 | None:intergenic | 40.0% |
| !! | GGAGTTTAAACAGTGGGTTA+AGG | + | chr3.3:6326141-6326160 | MS.gene52002:CDS | 40.0% |
| !! | TGTTTCGTTAGGGTTGGTAT+TGG | + | chr3.3:6325932-6325951 | MS.gene52002:CDS | 40.0% |
| !!! | GTTTATGGAGCCCTTTTTTG+AGG | + | chr3.3:6325895-6325914 | MS.gene52002:CDS | 40.0% |
| ACCATACAGAGCCTGTAGAT+AGG | - | chr3.3:6325974-6325993 | None:intergenic | 45.0% | |
| ATACAGTCGATTAGGATCCG+AGG | - | chr3.3:6326011-6326030 | None:intergenic | 45.0% | |
| ATAGCATCCAAGCGTGAGAA+GGG | + | chr3.3:6325476-6325495 | MS.gene52002:CDS | 45.0% | |
| ATCAGAGTCATCATCGTCTC+CGG | - | chr3.3:6325279-6325298 | None:intergenic | 45.0% | |
| CTTCAACATCCTCGTCACTA+CGG | - | chr3.3:6325754-6325773 | None:intergenic | 45.0% | |
| GATGACATCACACGAGAAGA+CGG | - | chr3.3:6325536-6325555 | None:intergenic | 45.0% | |
| GCAATGTGGCAAAAGTTTGG+TGG | + | chr3.3:6326820-6326839 | MS.gene52002:CDS | 45.0% | |
| GTTAAGGAAGTAGAGCGAAG+TGG | + | chr3.3:6326157-6326176 | MS.gene52002:CDS | 45.0% | |
| GTTTAAACTCCTCCTCAAGC+GGG | - | chr3.3:6326132-6326151 | None:intergenic | 45.0% | |
| TACATTTCCCTTCTCACGCT+TGG | - | chr3.3:6325486-6325505 | None:intergenic | 45.0% | |
| TGAATGAACTGCGTGCTAAG+AGG | + | chr3.3:6325597-6325616 | MS.gene52002:CDS | 45.0% | |
| TGAGAAGGACCGGTTGAAAA+GGG | + | chr3.3:6326324-6326343 | MS.gene52002:CDS | 45.0% | |
| TGCAAGAATTGGAGGAATCC+CGG | + | chr3.3:6326407-6326426 | MS.gene52002:CDS | 45.0% | |
| TGCCAATATCGCTAGCAATG+TGG | + | chr3.3:6326806-6326825 | MS.gene52002:CDS | 45.0% | |
| TGCCACATTGCTAGCGATAT+TGG | - | chr3.3:6326811-6326830 | None:intergenic | 45.0% | |
| TGTCTGGATCTTCTCTACTC+CGG | - | chr3.3:6326383-6326402 | None:intergenic | 45.0% | |
| TTATACCAGCAGCCTCCAAA+AGG | - | chr3.3:6325211-6325230 | None:intergenic | 45.0% | |
| TTCAACATCCTCGTCACTAC+GGG | - | chr3.3:6325753-6325772 | None:intergenic | 45.0% | |
| TTCTAACATCTGCTTCACGG+TGG | - | chr3.3:6326263-6326282 | None:intergenic | 45.0% | |
| TTTAAACTCCTCCTCAAGCG+GGG | - | chr3.3:6326131-6326150 | None:intergenic | 45.0% | |
| ! | AATACTTCTGGTGGTGCAGT+GGG | + | chr3.3:6326640-6326659 | MS.gene52002:CDS | 45.0% |
| ! | GACTCCTTCCATCGTTTTCT+GGG | - | chr3.3:6326915-6326934 | None:intergenic | 45.0% |
| ! | GTATTGGCAGGTCAAAGACT+GGG | + | chr3.3:6325948-6325967 | MS.gene52002:CDS | 45.0% |
| ! | GTTGGTTGTTTCGTTAGGGT+TGG | + | chr3.3:6325926-6325945 | MS.gene52002:CDS | 45.0% |
| ! | TAATACTTCTGGTGGTGCAG+TGG | + | chr3.3:6326639-6326658 | MS.gene52002:CDS | 45.0% |
| ! | TGACTCCTTCCATCGTTTTC+TGG | - | chr3.3:6326916-6326935 | None:intergenic | 45.0% |
| ! | TTTCGAGTCCCAGAAAACGA+TGG | + | chr3.3:6326904-6326923 | MS.gene52002:CDS | 45.0% |
| !! | CAAGGAGATGGACTAGATCA+AGG | + | chr3.3:6326572-6326591 | MS.gene52002:CDS | 45.0% |
| !! | GACTCTGATGATGATGATGG+TGG | + | chr3.3:6325290-6325309 | MS.gene52002:CDS | 45.0% |
| !! | TAAAGCATTGAAAGCAGGGG+AGG | + | chr3.3:6326531-6326550 | MS.gene52002:CDS | 45.0% |
| AAGGAAGTAGAGCGAAGTGG+TGG | + | chr3.3:6326160-6326179 | MS.gene52002:CDS | 50.0% | |
| ACAAGAGCTCCAGTGGATGA+AGG | + | chr3.3:6326751-6326770 | MS.gene52002:CDS | 50.0% | |
| ATCACACGAGAAGACGGAAG+AGG | - | chr3.3:6325530-6325549 | None:intergenic | 50.0% | |
| ATGTTGCAGCTGAGAAGGAC+CGG | + | chr3.3:6326314-6326333 | MS.gene52002:CDS | 50.0% | |
| CAAAGACTGGGCCTATCTAC+AGG | + | chr3.3:6325960-6325979 | MS.gene52002:CDS | 50.0% | |
| CATCTAGCCTCTTCAGCATC+CGG | - | chr3.3:6326186-6326205 | None:intergenic | 50.0% | |
| CTCACGCTTGGATGCTATCT+TGG | - | chr3.3:6325474-6325493 | None:intergenic | 50.0% | |
| CTGAGAAGGACCGGTTGAAA+AGG | + | chr3.3:6326323-6326342 | MS.gene52002:CDS | 50.0% | |
| GAAAGCAAGAACGATGCAGC+CGG | + | chr3.3:6326361-6326380 | MS.gene52002:CDS | 50.0% | |
| GACTCTGTTCCTTCATCCAC+TGG | - | chr3.3:6326763-6326782 | None:intergenic | 50.0% | |
| GAGTCCCAGAAAACGATGGA+AGG | + | chr3.3:6326908-6326927 | MS.gene52002:CDS | 50.0% | |
| GATAGCATCCAAGCGTGAGA+AGG | + | chr3.3:6325475-6325494 | MS.gene52002:CDS | 50.0% | |
| GATGCTGAAGAGGCTAGATG+TGG | + | chr3.3:6326186-6326205 | MS.gene52002:CDS | 50.0% | |
| GCCTATCTACAGGCTCTGTA+TGG | + | chr3.3:6325970-6325989 | MS.gene52002:CDS | 50.0% | |
| GGACCGGTTGAAAAGGGAAT+TGG | + | chr3.3:6326330-6326349 | MS.gene52002:CDS | 50.0% | |
| GTCTGATAGGGCTGCTAAGA+AGG | + | chr3.3:6325430-6325449 | MS.gene52002:CDS | 50.0% | |
| TGGAGGAATCCCGGAAATCT+CGG | + | chr3.3:6326416-6326435 | MS.gene52002:CDS | 50.0% | |
| TGGGATTGGAGCTGGTATGA+CGG | + | chr3.3:6326678-6326697 | MS.gene52002:CDS | 50.0% | |
| TTAAACTCCTCCTCAAGCGG+GGG | - | chr3.3:6326130-6326149 | None:intergenic | 50.0% | |
| TTCTGACAGGTCAGCTGCTA+AGG | + | chr3.3:6325565-6325584 | MS.gene52002:CDS | 50.0% | |
| ! | CAAAAGTTTGGTGGAGCGCA+GGG | + | chr3.3:6326829-6326848 | MS.gene52002:CDS | 50.0% |
| ! | CAGGGGGTTTTCCGCAAATA+GGG | + | chr3.3:6325681-6325700 | MS.gene52002:CDS | 50.0% |
| ! | TCAGGGGGTTTTCCGCAAAT+AGG | + | chr3.3:6325680-6325699 | MS.gene52002:CDS | 50.0% |
| !! | AATGACCTTTTGGAGGCTGC+TGG | + | chr3.3:6325203-6325222 | MS.gene52002:CDS | 50.0% |
| !! | GGTATTGGCAGGTCAAAGAC+TGG | + | chr3.3:6325947-6325966 | MS.gene52002:CDS | 50.0% |
| !! | TCGTTAGGGTTGGTATTGGC+AGG | + | chr3.3:6325936-6325955 | MS.gene52002:CDS | 50.0% |
| AAGTAGAGCGAAGTGGTGGC+CGG | + | chr3.3:6326164-6326183 | MS.gene52002:CDS | 55.0% | |
| AAGTAGGTCCCGTAGTGACG+AGG | + | chr3.3:6325742-6325761 | MS.gene52002:CDS | 55.0% | |
| ACACGAGAAGACGGAAGAGG+AGG | - | chr3.3:6325527-6325546 | None:intergenic | 55.0% | |
| AGCACATCGCGAGCTGAAAG+AGG | + | chr3.3:6325640-6325659 | MS.gene52002:CDS | 55.0% | |
| AGCAGCAGCTTCCAAAGCCT+CGG | - | chr3.3:6326710-6326729 | None:intergenic | 55.0% | |
| ATCCCGGAAATCTCGGGAGA+AGG | + | chr3.3:6326423-6326442 | MS.gene52002:CDS | 55.0% | |
| CACATCGCGAGCTGAAAGAG+GGG | + | chr3.3:6325642-6325661 | MS.gene52002:CDS | 55.0% | |
| CATCACTCCTGTCCACCTCA+CGG | - | chr3.3:6325322-6325341 | None:intergenic | 55.0% | |
| CGTCCTTCTCCCGAGATTTC+CGG | - | chr3.3:6326429-6326448 | None:intergenic | 55.0% | |
| CTCAGAAAGCCTCAGAGCCT+TGG | - | chr3.3:6326452-6326471 | None:intergenic | 55.0% | |
| GAAATGAGACCTCTGCTGCG+AGG | + | chr3.3:6326077-6326096 | MS.gene52002:CDS | 55.0% | |
| GACAGGTCAGCTGCTAAGGA+TGG | + | chr3.3:6325569-6325588 | MS.gene52002:CDS | 55.0% | |
| GATGGAGGCTGCAATGGGAT+TGG | + | chr3.3:6326664-6326683 | MS.gene52002:CDS | 55.0% | |
| GCACATCGCGAGCTGAAAGA+GGG | + | chr3.3:6325641-6325660 | MS.gene52002:CDS | 55.0% | |
| GCTGAAGAGGCTAGATGTGG+TGG | + | chr3.3:6326189-6326208 | MS.gene52002:CDS | 55.0% | |
| GGAGGAATCCCGGAAATCTC+GGG | + | chr3.3:6326417-6326436 | MS.gene52002:CDS | 55.0% | |
| GGGAGTTCAGGCAGGGTTTA+TGG | + | chr3.3:6326849-6326868 | MS.gene52002:CDS | 55.0% | |
| GGTAGACACAAGAGCTCCAG+TGG | + | chr3.3:6326744-6326763 | MS.gene52002:CDS | 55.0% | |
| GTCCTTCTCCCGAGATTTCC+GGG | - | chr3.3:6326428-6326447 | None:intergenic | 55.0% | |
| TTCAGCTCGCGATGTGCTTC+CGG | - | chr3.3:6325638-6325657 | None:intergenic | 55.0% | |
| ! | GCAAAAGTTTGGTGGAGCGC+AGG | + | chr3.3:6326828-6326847 | MS.gene52002:CDS | 55.0% |
| ! | TGCTGCTGGTGCTGGAAAGT+TGG | + | chr3.3:6326723-6326742 | MS.gene52002:CDS | 55.0% |
| !! | TGATGGTGGTTCTGACCGTG+AGG | + | chr3.3:6325304-6325323 | MS.gene52002:CDS | 55.0% |
| !! | TGGGTGATGGAGGCTGCAAT+GGG | + | chr3.3:6326659-6326678 | MS.gene52002:CDS | 55.0% |
| AGAAGGACGCCAAGGCTCTG+AGG | + | chr3.3:6326440-6326459 | MS.gene52002:CDS | 60.0% | |
| AGCTTCCAAAGCCTCGGCAG+TGG | - | chr3.3:6326704-6326723 | None:intergenic | 60.0% | |
| ATCTCGGGAGAAGGACGCCA+AGG | + | chr3.3:6326432-6326451 | MS.gene52002:CDS | 60.0% | |
| ATGAGACCTCTGCTGCGAGG+TGG | + | chr3.3:6326080-6326099 | MS.gene52002:CDS | 60.0% | |
| CATTTGCCACCTCGCAGCAG+AGG | - | chr3.3:6326089-6326108 | None:intergenic | 60.0% | |
| CGAGAAGACGGAAGAGGAGG+CGG | - | chr3.3:6325524-6325543 | None:intergenic | 60.0% | |
| CGGGGGAGAATCGCTAACCA+TGG | - | chr3.3:6326113-6326132 | None:intergenic | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | + | chr3.3:6326087-6326106 | MS.gene52002:CDS | 60.0% | |
| GAGGCTGAAACAGCGAGAGC+CGG | + | chr3.3:6325616-6325635 | MS.gene52002:CDS | 60.0% | |
| GCATTGAAAGCAGGGGAGGC+AGG | + | chr3.3:6326535-6326554 | MS.gene52002:CDS | 60.0% | |
| GGCTGCAATGGGATTGGAGC+TGG | + | chr3.3:6326670-6326689 | MS.gene52002:CDS | 60.0% | |
| GTTCTGACCGTGAGGTGGAC+AGG | + | chr3.3:6325312-6325331 | MS.gene52002:CDS | 60.0% | |
| TAGCGATTCTCCCCCGCTTG+AGG | + | chr3.3:6326117-6326136 | MS.gene52002:CDS | 60.0% | |
| TGCGAGGTGGCAAATGGCCA+TGG | + | chr3.3:6326093-6326112 | MS.gene52002:CDS | 60.0% | |
| TTGGAAGCTGCTGCTGGTGC+TGG | + | chr3.3:6326715-6326734 | MS.gene52002:CDS | 60.0% | |
| ! | TCTGGTGGTGCAGTGGGTGA+TGG | + | chr3.3:6326646-6326665 | MS.gene52002:CDS | 60.0% |
| !! | GAGGCTTTGGAAGCTGCTGC+TGG | + | chr3.3:6326709-6326728 | MS.gene52002:CDS | 60.0% |
| !! | GTGGGTGATGGAGGCTGCAA+TGG | + | chr3.3:6326658-6326677 | MS.gene52002:CDS | 60.0% |
| !! | TGGTGGTTCTGACCGTGAGG+TGG | + | chr3.3:6325307-6325326 | MS.gene52002:CDS | 60.0% |
| CCAGCTGCAGCCTCTTCAGC+CGG | - | chr3.3:6326616-6326635 | None:intergenic | 65.0% | |
| CGATTCTCCCCCGCTTGAGG+AGG | + | chr3.3:6326120-6326139 | MS.gene52002:CDS | 65.0% | |
| GAGCGCAGGGAGTTCAGGCA+GGG | + | chr3.3:6326842-6326861 | MS.gene52002:CDS | 65.0% | |
| GTGGTGGCCGGATGCTGAAG+AGG | + | chr3.3:6326176-6326195 | MS.gene52002:CDS | 65.0% | |
| TGGTATGACGGCCACTGCCG+AGG | + | chr3.3:6326690-6326709 | MS.gene52002:CDS | 65.0% | |
| TGGTGGAGCGCAGGGAGTTC+AGG | + | chr3.3:6326837-6326856 | MS.gene52002:CDS | 65.0% | |
| ! | GGTGGTGCAGTGGGTGATGG+AGG | + | chr3.3:6326649-6326668 | MS.gene52002:CDS | 65.0% |
| CCGGCTGAAGAGGCTGCAGC+TGG | + | chr3.3:6326613-6326632 | MS.gene52002:CDS | 70.0% | |
| GACGGCCACTGCCGAGGCTT+TGG | + | chr3.3:6326696-6326715 | MS.gene52002:CDS | 70.0% | |
| GGAGCGCAGGGAGTTCAGGC+AGG | + | chr3.3:6326841-6326860 | MS.gene52002:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 6325188 | 6326987 | 6325188 | ID=MS.gene52002 |
| chr3.3 | mRNA | 6325188 | 6326987 | 6325188 | ID=MS.gene52002.t1;Parent=MS.gene52002 |
| chr3.3 | exon | 6325188 | 6326987 | 6325188 | ID=MS.gene52002.t1.exon1;Parent=MS.gene52002.t1 |
| chr3.3 | CDS | 6325188 | 6326987 | 6325188 | ID=cds.MS.gene52002.t1;Parent=MS.gene52002.t1 |
| Gene Sequence |
| Protein sequence |
