Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53497.t1 | XP_003630015.1 | 89.1 | 594 | 65 | 0 | 6 | 599 | 11 | 604 | 1.50E-305 | 1058.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53497.t1 | Q84MA5 | 67.1 | 593 | 185 | 1 | 5 | 597 | 8 | 590 | 5.7e-229 | 795.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53497.t1 | G7L9L7 | 89.1 | 594 | 65 | 0 | 6 | 599 | 11 | 604 | 1.1e-305 | 1058.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene53497 | MS.gene08148 | PPI |
MS.gene53497 | MS.gene41790 | PPI |
MS.gene53497 | MS.gene08144 | PPI |
MS.gene53497 | MS.gene073450 | PPI |
MS.gene53497 | MS.gene007812 | PPI |
MS.gene53497 | MS.gene41795 | PPI |
MS.gene53497 | MS.gene38964 | PPI |
MS.gene53497 | MS.gene00402 | PPI |
MS.gene53497 | MS.gene042491 | PPI |
MS.gene007811 | MS.gene53497 | PPI |
MS.gene53497 | MS.gene47297 | PPI |
MS.gene53497 | MS.gene49831 | PPI |
MS.gene41792 | MS.gene53497 | PPI |
MS.gene53497 | MS.gene38965 | PPI |
MS.gene53497 | MS.gene041367 | PPI |
MS.gene53497 | MS.gene58674 | PPI |
MS.gene53497 | MS.gene08137 | PPI |
MS.gene53497 | MS.gene32277 | PPI |
MS.gene032361 | MS.gene53497 | PPI |
MS.gene53497 | MS.gene042480 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53497.t1 | MTR_8g089320 | 89.020 | 592 | 65 | 0 | 8 | 599 | 13 | 604 | 0.0 | 1082 |
MS.gene53497.t1 | MTR_8g089360 | 73.868 | 574 | 146 | 3 | 16 | 589 | 9 | 578 | 0.0 | 865 |
MS.gene53497.t1 | MTR_8g089360 | 73.868 | 574 | 146 | 3 | 16 | 589 | 26 | 595 | 0.0 | 865 |
MS.gene53497.t1 | MTR_8g089340 | 85.466 | 461 | 66 | 1 | 144 | 603 | 1 | 461 | 0.0 | 777 |
MS.gene53497.t1 | MTR_1g030660 | 66.000 | 550 | 186 | 1 | 23 | 572 | 23 | 571 | 0.0 | 766 |
MS.gene53497.t1 | MTR_2g035430 | 56.218 | 587 | 252 | 1 | 1 | 582 | 1 | 587 | 0.0 | 696 |
MS.gene53497.t1 | MTR_8g461380 | 51.250 | 560 | 271 | 2 | 14 | 572 | 26 | 584 | 0.0 | 579 |
MS.gene53497.t1 | MTR_1g111740 | 43.106 | 573 | 309 | 4 | 23 | 583 | 6 | 573 | 2.77e-153 | 453 |
MS.gene53497.t1 | MTR_4g099270 | 40.713 | 533 | 302 | 5 | 46 | 568 | 1 | 529 | 5.05e-127 | 385 |
MS.gene53497.t1 | MTR_4g099270 | 44.416 | 394 | 213 | 3 | 29 | 418 | 5 | 396 | 1.23e-107 | 330 |
MS.gene53497.t1 | MTR_4g099270 | 38.717 | 421 | 244 | 5 | 158 | 568 | 1 | 417 | 1.57e-89 | 284 |
MS.gene53497.t1 | MTR_4g099270 | 44.554 | 303 | 164 | 2 | 29 | 327 | 5 | 307 | 3.76e-84 | 266 |
MS.gene53497.t1 | MTR_6g027630 | 35.225 | 423 | 260 | 4 | 29 | 441 | 6 | 424 | 4.20e-78 | 258 |
MS.gene53497.t1 | MTR_6g027630 | 35.225 | 423 | 260 | 4 | 29 | 441 | 6 | 424 | 1.54e-77 | 258 |
MS.gene53497.t1 | MTR_8g089342 | 91.803 | 122 | 10 | 0 | 12 | 133 | 18 | 139 | 1.81e-76 | 239 |
MS.gene53497.t1 | MTR_6g027680 | 34.123 | 422 | 265 | 3 | 27 | 441 | 12 | 427 | 2.46e-75 | 251 |
MS.gene53497.t1 | MTR_6g027660 | 33.100 | 429 | 274 | 4 | 20 | 441 | 3 | 425 | 4.63e-74 | 249 |
MS.gene53497.t1 | MTR_7g086510 | 36.228 | 403 | 246 | 4 | 46 | 441 | 21 | 419 | 1.86e-73 | 248 |
MS.gene53497.t1 | MTR_6g027650 | 33.647 | 425 | 257 | 5 | 29 | 441 | 6 | 417 | 5.41e-73 | 246 |
MS.gene53497.t1 | MTR_7g086610 | 37.337 | 383 | 231 | 3 | 67 | 441 | 32 | 413 | 6.71e-73 | 246 |
MS.gene53497.t1 | MTR_6g034535 | 43.657 | 268 | 136 | 5 | 323 | 581 | 49 | 310 | 2.40e-69 | 227 |
MS.gene53497.t1 | MTR_6g034535 | 41.667 | 96 | 31 | 1 | 93 | 188 | 19 | 89 | 2.51e-14 | 74.7 |
MS.gene53497.t1 | MTR_7g007850 | 29.720 | 535 | 349 | 10 | 60 | 578 | 42 | 565 | 5.87e-64 | 220 |
MS.gene53497.t1 | MTR_7g007850 | 28.142 | 565 | 349 | 11 | 60 | 578 | 42 | 595 | 7.08e-60 | 210 |
MS.gene53497.t1 | MTR_6g027630 | 34.503 | 342 | 211 | 3 | 110 | 441 | 1 | 339 | 4.44e-57 | 201 |
MS.gene53497.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 7.85e-57 | 199 |
MS.gene53497.t1 | MTR_7g007850 | 32.474 | 388 | 255 | 4 | 60 | 441 | 42 | 428 | 1.97e-56 | 199 |
MS.gene53497.t1 | MTR_6g027670 | 34.810 | 158 | 103 | 0 | 284 | 441 | 1 | 158 | 2.65e-27 | 112 |
MS.gene53497.t1 | MTR_2g064760 | 89.286 | 28 | 3 | 0 | 485 | 512 | 14 | 41 | 3.90e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53497.t1 | AT4G21120 | 66.891 | 595 | 187 | 1 | 5 | 599 | 8 | 592 | 0.0 | 833 |
MS.gene53497.t1 | AT2G34960 | 58.719 | 562 | 230 | 2 | 4 | 564 | 1 | 561 | 0.0 | 682 |
MS.gene53497.t1 | AT4G21120 | 64.602 | 452 | 150 | 1 | 148 | 599 | 1 | 442 | 0.0 | 607 |
MS.gene53497.t1 | AT1G17120 | 53.321 | 557 | 259 | 1 | 8 | 564 | 22 | 577 | 0.0 | 590 |
MS.gene53497.t1 | AT5G04770 | 41.772 | 553 | 302 | 5 | 25 | 562 | 15 | 562 | 1.87e-144 | 431 |
MS.gene53497.t1 | AT3G10600 | 41.176 | 561 | 300 | 7 | 22 | 562 | 11 | 561 | 8.67e-144 | 429 |
MS.gene53497.t1 | AT5G04770 | 42.708 | 384 | 210 | 2 | 25 | 398 | 15 | 398 | 7.71e-106 | 325 |
MS.gene53497.t1 | AT3G10600 | 39.765 | 425 | 226 | 7 | 158 | 562 | 1 | 415 | 1.29e-99 | 310 |
MS.gene53497.t1 | AT5G04770 | 40.238 | 420 | 231 | 5 | 158 | 562 | 1 | 415 | 2.76e-94 | 296 |
MS.gene53497.t1 | AT5G36940 | 35.770 | 383 | 239 | 3 | 66 | 441 | 28 | 410 | 6.40e-74 | 248 |
MS.gene53497.t1 | AT3G03720 | 33.915 | 401 | 256 | 3 | 48 | 441 | 7 | 405 | 7.18e-72 | 242 |
MS.gene53497.t1 | AT1G58030 | 33.766 | 385 | 248 | 3 | 64 | 441 | 37 | 421 | 2.18e-68 | 234 |
MS.gene53497.t1 | AT1G05940 | 29.151 | 542 | 354 | 7 | 59 | 583 | 40 | 568 | 2.11e-64 | 221 |
MS.gene53497.t1 | AT1G05940 | 29.126 | 515 | 342 | 6 | 40 | 537 | 21 | 529 | 8.05e-61 | 211 |
MS.gene53497.t1 | AT1G05940 | 30.679 | 427 | 283 | 4 | 59 | 473 | 40 | 465 | 6.79e-59 | 205 |
MS.gene53497.t1 | AT1G05940 | 27.753 | 454 | 300 | 5 | 146 | 583 | 9 | 450 | 5.51e-43 | 160 |
Find 144 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACATTCCTATTGGTCTTAT+TGG | 0.099434 | 4.2:+12245208 | MS.gene53497:CDS |
CAATTGGAATTTCAGCTTAT+TGG | 0.122057 | 4.2:+12245725 | MS.gene53497:CDS |
TATTCTCAGTTTACGCCTTT+TGG | 0.183223 | 4.2:+12245085 | MS.gene53497:CDS |
GTGTGTCTTGTGTTGATTAT+TGG | 0.196899 | 4.2:+12245697 | MS.gene53497:CDS |
CTTGTATACTATGTGCTATT+AGG | 0.206726 | 4.2:+12245973 | MS.gene53497:CDS |
AATTGGAATTTCAGCTTATT+GGG | 0.231227 | 4.2:+12245726 | MS.gene53497:CDS |
GTTATTAACATATTCCTTCT+TGG | 0.233431 | 4.2:+12245898 | MS.gene53497:CDS |
GCTTGTAGCCTTAGCACTTT+TGG | 0.242533 | 4.2:+12245618 | MS.gene53497:CDS |
TCATGTTATGAACTATTATA+TGG | 0.255268 | 4.2:-12244886 | None:intergenic |
GGGGAGTTCCTTTGGTTCCT+TGG | 0.281218 | 4.2:+12245857 | MS.gene53497:CDS |
TTGATAGAAAATCGTATATA+AGG | 0.283159 | 4.2:+12245926 | MS.gene53497:CDS |
ACTATTATATGGAAATAGTT+AGG | 0.287181 | 4.2:-12244875 | None:intergenic |
CATAACATGAACCCTGATTA+TGG | 0.301559 | 4.2:+12244899 | MS.gene53497:CDS |
TTGTATACTATGTGCTATTA+GGG | 0.303775 | 4.2:+12245974 | MS.gene53497:CDS |
TGCGGAGCTGGTGGAGATTA+AGG | 0.326488 | 4.2:+12244280 | MS.gene53497:CDS |
TGGCAAAGAAGCCTAAATTA+TGG | 0.332142 | 4.2:+12245836 | MS.gene53497:CDS |
CTTCTCTTCATAGTAATTGC+TGG | 0.335458 | 4.2:+12245037 | MS.gene53497:CDS |
AAAGGAACTCCCCATAATTT+AGG | 0.346807 | 4.2:-12245847 | None:intergenic |
GGGTCAAGATGGCCATAATC+AGG | 0.349541 | 4.2:-12244911 | None:intergenic |
TAAATTATGGGGAGTTCCTT+TGG | 0.356075 | 4.2:+12245849 | MS.gene53497:CDS |
CGTATATAAGGTTTGCGGTT+TGG | 0.357696 | 4.2:+12245938 | MS.gene53497:CDS |
GCCAAGTACATTATTTCATT+AGG | 0.357842 | 4.2:+12245358 | MS.gene53497:CDS |
GTGAGGACCACAACAGCAAC+AGG | 0.374521 | 4.2:-12244932 | None:intergenic |
TATAATTAATTACCTGCAAC+AGG | 0.375957 | 4.2:-12244512 | None:intergenic |
CTGAGAATAGTTCTCGGGTT+TGG | 0.377128 | 4.2:-12245071 | None:intergenic |
GGCTAGGGAGCAAGCAGGTC+CGG | 0.379687 | 4.2:+12244409 | MS.gene53497:CDS |
AGAGCCTTTAGTGCTGTAAA+TGG | 0.380012 | 4.2:-12244972 | None:intergenic |
TTCCATTGCTTCTCAACCTC+CGG | 0.382100 | 4.2:-12246060 | None:intergenic |
ATACTCAAGGAGGATGTTCC+CGG | 0.387864 | 4.2:-12244786 | None:intergenic |
GGCAAAGAAGCCTAAATTAT+GGG | 0.393362 | 4.2:+12245837 | MS.gene53497:CDS |
ATTGAGATTGTAGCATTCAT+AGG | 0.394274 | 4.2:-12245508 | None:intergenic |
TCAAGTGGGGTAACTACAAA+AGG | 0.399563 | 4.2:+12245655 | MS.gene53497:CDS |
ATTGGTTCAGTTGTCGGGTC+TGG | 0.399959 | 4.2:+12244362 | MS.gene53497:CDS |
TGGTGGGACTTGATGTGGTT+TGG | 0.403047 | 4.2:+12244338 | MS.gene53497:CDS |
TTGGCATTGGTTCAGTTGTC+GGG | 0.404173 | 4.2:+12244357 | MS.gene53497:CDS |
TTGATTATTGGATCTTCAAT+TGG | 0.407894 | 4.2:+12245709 | MS.gene53497:CDS |
AGGGAGATGGCAACAGTTGA+TGG | 0.415607 | 4.2:+12244116 | None:intergenic |
TAGTGCTGTTGGAATGGATT+GGG | 0.417491 | 4.2:+12245336 | MS.gene53497:CDS |
AATTTAGGCTTCTTTGCCAT+TGG | 0.418140 | 4.2:-12245832 | None:intergenic |
ATACATATCAAGTTATCAAT+TGG | 0.420768 | 4.2:-12246133 | None:intergenic |
TTTGGCATTGGTTCAGTTGT+CGG | 0.423683 | 4.2:+12244356 | MS.gene53497:CDS |
AGATGAAGAAGACGCTGAAT+TGG | 0.426669 | 4.2:+12244318 | MS.gene53497:CDS |
GCTGTGGAAATACCTGTTGC+AGG | 0.427756 | 4.2:+12244500 | MS.gene53497:CDS |
TCTTGACCCTGTTGCTGTTG+TGG | 0.431072 | 4.2:+12244925 | MS.gene53497:CDS |
GCTCTTGTTGATGAAAGAAC+AGG | 0.435974 | 4.2:+12245481 | MS.gene53497:CDS |
CTATTATATGGAAATAGTTA+GGG | 0.437068 | 4.2:-12244874 | None:intergenic |
ATAAGGTTTGCGGTTTGGAC+AGG | 0.438702 | 4.2:+12245943 | MS.gene53497:CDS |
GACTTGATGTGGTTTGGCAT+TGG | 0.438927 | 4.2:+12244344 | MS.gene53497:CDS |
ATTGAGCCAATAAGACCAAT+AGG | 0.439105 | 4.2:-12245214 | None:intergenic |
AACAGTGAGCATGGATGGAT+TGG | 0.444473 | 4.2:+12245751 | MS.gene53497:CDS |
GTGTTGTCCTTTGTCGTCTC+CGG | 0.450135 | 4.2:+12244437 | MS.gene53497:CDS |
GATGTTCCCGGCCGCTATAA+AGG | 0.452892 | 4.2:-12244774 | None:intergenic |
GGAGGAGTCGTTTAAGAGTT+GGG | 0.454594 | 4.2:+12244184 | MS.gene53497:CDS |
CTTGCCATTTACAGCACTAA+AGG | 0.456544 | 4.2:+12244968 | MS.gene53497:CDS |
GCACTAAAAGCAACAGAGAA+AGG | 0.459176 | 4.2:-12245319 | None:intergenic |
CGGAGGAGTCGTTTAAGAGT+TGG | 0.463490 | 4.2:+12244183 | MS.gene53497:CDS |
ACCTAATGAAATAATGTACT+TGG | 0.470231 | 4.2:-12245359 | None:intergenic |
TTAGTGCTGTTGGAATGGAT+TGG | 0.470694 | 4.2:+12245335 | MS.gene53497:CDS |
TGCTTACCGGACTTGAGGCT+AGG | 0.472425 | 4.2:+12244393 | MS.gene53497:CDS |
CCTGGTAGAGACATTCCTAT+TGG | 0.474972 | 4.2:+12245199 | MS.gene53497:CDS |
AGATAACAAAGCGGAGATAC+CGG | 0.475452 | 4.2:-12244456 | None:intergenic |
CAACTCTTAAACGACTCCTC+CGG | 0.477205 | 4.2:-12244182 | None:intergenic |
TGCTAGTAAGCAATATATTA+CGG | 0.478001 | 4.2:-12245248 | None:intergenic |
ACATAGCAGTGGTTCTGATC+CGG | 0.487510 | 4.2:+12246041 | MS.gene53497:CDS |
AACTCTTAAACGACTCCTCC+GGG | 0.489247 | 4.2:-12244181 | None:intergenic |
ATCCACTGATCATGCGGAGC+TGG | 0.490160 | 4.2:+12244268 | MS.gene53497:CDS |
CACTGATCATGCGGAGCTGG+TGG | 0.500362 | 4.2:+12244271 | MS.gene53497:CDS |
AAACGATCCTTCAACCGAAA+AGG | 0.503749 | 4.2:-12244236 | None:intergenic |
AGTTGAGCTAGGAGACTTTG+TGG | 0.506976 | 4.2:+12244751 | MS.gene53497:CDS |
ACGCCGCCGTAGCACGATCA+TGG | 0.508863 | 4.2:+12244819 | MS.gene53497:CDS |
AAAATCGTATATAAGGTTTG+CGG | 0.509479 | 4.2:+12245933 | MS.gene53497:CDS |
CGTAAACTGAGAATAGTTCT+CGG | 0.509480 | 4.2:-12245077 | None:intergenic |
CCAATAGGAATGTCTCTACC+AGG | 0.509969 | 4.2:-12245199 | None:intergenic |
TTCTATCAATAGATCCAAGA+AGG | 0.516981 | 4.2:-12245912 | None:intergenic |
CAGTTGATGGAGTACGGAAG+AGG | 0.523221 | 4.2:+12244129 | MS.gene53497:CDS |
GCATACTTAAAAGTTGAGCT+AGG | 0.528109 | 4.2:+12244740 | MS.gene53497:CDS |
GCAGAGGGTAGCAAAATAAG+AGG | 0.528621 | 4.2:-12244843 | None:intergenic |
GGGCTAACAGTGAGCATGGA+TGG | 0.537453 | 4.2:+12245746 | MS.gene53497:CDS |
TAAGGTTTGCGGTTTGGACA+GGG | 0.541476 | 4.2:+12245944 | MS.gene53497:CDS |
TTTGTGGCCTTTATAGCGGC+CGG | 0.542920 | 4.2:+12244767 | MS.gene53497:CDS |
CTAATAGCACATAGTATACA+AGG | 0.543713 | 4.2:-12245972 | None:intergenic |
GTGAGGCGTTACTATTCAAG+TGG | 0.544235 | 4.2:+12245640 | MS.gene53497:CDS |
CAACAGCAACAGGGTCAAGA+TGG | 0.544563 | 4.2:-12244922 | None:intergenic |
CTTTAGTGCTGTAAATGGCA+AGG | 0.545192 | 4.2:-12244967 | None:intergenic |
ACAAAGGACAACACAACTGC+CGG | 0.545347 | 4.2:-12244428 | None:intergenic |
TGGCAACAGTTGATGGAGTA+CGG | 0.547405 | 4.2:+12244123 | MS.gene53497:CDS |
ACCATACCATGAAACCCAAA+AGG | 0.547517 | 4.2:-12245100 | None:intergenic |
TGAAGAAGACGCTGAATTGG+TGG | 0.547778 | 4.2:+12244321 | MS.gene53497:CDS |
TGCAGTTTCAACAATGGCTG+AGG | 0.548532 | 4.2:+12245165 | MS.gene53497:CDS |
AGTTGATGGAGTACGGAAGA+GGG | 0.549210 | 4.2:+12244130 | MS.gene53497:CDS |
GTAAACTGAGAATAGTTCTC+GGG | 0.549675 | 4.2:-12245076 | None:intergenic |
CACCAGCTCCGCATGATCAG+TGG | 0.550498 | 4.2:-12244270 | None:intergenic |
TTAATAACAATAGATAAAGA+AGG | 0.556654 | 4.2:-12245883 | None:intergenic |
GCTTACCGGACTTGAGGCTA+GGG | 0.557372 | 4.2:+12244394 | MS.gene53497:CDS |
ATCCGGAGGTTGAGAAGCAA+TGG | 0.560522 | 4.2:+12246058 | MS.gene53497:CDS |
GGAGATACCGGAGACGACAA+AGG | 0.565622 | 4.2:-12244444 | None:intergenic |
CAAGTGGGGTAACTACAAAA+GGG | 0.569446 | 4.2:+12245656 | MS.gene53497:CDS |
TTGTGGCCTTTATAGCGGCC+GGG | 0.569869 | 4.2:+12244768 | MS.gene53497:CDS |
CTTTGATGCAGTTTCAACAA+TGG | 0.570876 | 4.2:+12245159 | MS.gene53497:CDS |
CAAGATGGAGCAAGGTGCTG+TGG | 0.572819 | 4.2:+12246083 | MS.gene53497:CDS |
TATTGGGCTAACAGTGAGCA+TGG | 0.574198 | 4.2:+12245742 | MS.gene53497:CDS |
TTTAAGAGTTGGGAAAACTA+CGG | 0.577286 | 4.2:+12244194 | MS.gene53497:CDS |
AAACTACGGAAAATCTGTCA+TGG | 0.579172 | 4.2:+12244208 | MS.gene53497:CDS |
TTTAGTGCTGTAAATGGCAA+GGG | 0.579804 | 4.2:-12244966 | None:intergenic |
ATTTCATTAGGTGCTTTGAA+AGG | 0.582581 | 4.2:+12245370 | MS.gene53497:CDS |
TGAATTGGTGGGACTTGATG+TGG | 0.584039 | 4.2:+12244333 | MS.gene53497:CDS |
GTAAATGGCAAGGGTTGTGA+TGG | 0.589331 | 4.2:-12244957 | None:intergenic |
ACGCCTCACCAAAAGTGCTA+AGG | 0.593995 | 4.2:-12245626 | None:intergenic |
CTTGAGGCTAGGGAGCAAGC+AGG | 0.600694 | 4.2:+12244404 | MS.gene53497:CDS |
TGAGGCGTTACTATTCAAGT+GGG | 0.601081 | 4.2:+12245641 | MS.gene53497:CDS |
TGAGAAGCAATGGAACAAGA+TGG | 0.601081 | 4.2:+12246068 | MS.gene53497:CDS |
GTACTCACATGATGCCACCT+TGG | 0.601374 | 4.2:+12245455 | MS.gene53497:CDS |
TTGCTCCCTAGCCTCAAGTC+CGG | 0.601610 | 4.2:-12244399 | None:intergenic |
GGTCAAGATGGCCATAATCA+GGG | 0.602250 | 4.2:-12244910 | None:intergenic |
AGACTTTGTGGCCTTTATAG+CGG | 0.604630 | 4.2:+12244763 | MS.gene53497:CDS |
GAAGGTAGCCAAGGAACCAA+AGG | 0.606519 | 4.2:-12245865 | None:intergenic |
CTGTTACACAGAGTTTGCTG+TGG | 0.607651 | 4.2:+12244484 | MS.gene53497:CDS |
GAAGAAGACGCTGAATTGGT+GGG | 0.611576 | 4.2:+12244322 | MS.gene53497:CDS |
ATAGATAAAGAAGGTAGCCA+AGG | 0.615378 | 4.2:-12245874 | None:intergenic |
GTGGAGATTAAGGCTCGTAG+TGG | 0.627815 | 4.2:+12244290 | MS.gene53497:CDS |
AGAGGTCCATGATCGTGCTA+CGG | 0.630001 | 4.2:-12244825 | None:intergenic |
CGATGCGATGTAGTTGAAGA+CGG | 0.632773 | 4.2:-12244996 | None:intergenic |
CAATGGAACAAGATGGAGCA+AGG | 0.635963 | 4.2:+12246075 | MS.gene53497:CDS |
TGCTTTGAAAGGAATGACAA+CGG | 0.638848 | 4.2:+12245381 | MS.gene53497:CDS |
GAAACGATCCACTGATCATG+CGG | 0.640662 | 4.2:+12244262 | MS.gene53497:CDS |
CGTTGCTTATAATATACTCA+AGG | 0.641365 | 4.2:-12244799 | None:intergenic |
TGGAGATTAAGGCTCGTAGT+GGG | 0.642539 | 4.2:+12244291 | MS.gene53497:CDS |
GCAAAGAAGCCTAAATTATG+GGG | 0.643860 | 4.2:+12245838 | MS.gene53497:CDS |
GGTCCATGATCGTGCTACGG+CGG | 0.644699 | 4.2:-12244822 | None:intergenic |
TAGCAGTGGTTCTGATCCGG+AGG | 0.648811 | 4.2:+12246044 | MS.gene53497:CDS |
GTTGATGGAGTACGGAAGAG+GGG | 0.650485 | 4.2:+12244131 | MS.gene53497:CDS |
GATAAGAGTAAACATAGCAG+TGG | 0.653043 | 4.2:+12246030 | MS.gene53497:CDS |
GCTGAGGAAACTAAGAACCC+TGG | 0.654351 | 4.2:+12245181 | MS.gene53497:CDS |
TGCTTATAATATACTCAAGG+AGG | 0.670617 | 4.2:-12244796 | None:intergenic |
CAATAGGAATGTCTCTACCA+GGG | 0.688021 | 4.2:-12245198 | None:intergenic |
ACAAAGTAGAAATCGACATG+AGG | 0.689359 | 4.2:-12245585 | None:intergenic |
CAAGGGTTGTGATGGCTGTG+AGG | 0.703368 | 4.2:-12244949 | None:intergenic |
TGAGGACCACAACAGCAACA+GGG | 0.726103 | 4.2:-12244931 | None:intergenic |
TCAACAAGAGCAAACCAAGG+TGG | 0.728106 | 4.2:-12245469 | None:intergenic |
ACAGAAGACAGATAACAAAG+CGG | 0.729498 | 4.2:-12244465 | None:intergenic |
TCATCAACAAGAGCAAACCA+AGG | 0.735762 | 4.2:-12245472 | None:intergenic |
TGAAGAGAAGAACAAGCACG+TGG | 0.736575 | 4.2:-12245024 | None:intergenic |
TAGTAAGCAATATATTACGG+TGG | 0.742444 | 4.2:-12245245 | None:intergenic |
GAGGCGTTACTATTCAAGTG+GGG | 0.751832 | 4.2:+12245642 | MS.gene53497:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATAACAATAGATAAAGA+AGG | - | chr4.2:12245886-12245905 | None:intergenic | 15.0% |
!! | ACTATTATATGGAAATAGTT+AGG | - | chr4.2:12244878-12244897 | None:intergenic | 20.0% |
!! | ATGCTTTGATAAGATAAAAA+AGG | + | chr4.2:12244597-12244616 | MS.gene53497:intron | 20.0% |
!! | CTATTATATGGAAATAGTTA+GGG | - | chr4.2:12244877-12244896 | None:intergenic | 20.0% |
!! | TCATGTTATGAACTATTATA+TGG | - | chr4.2:12244889-12244908 | None:intergenic | 20.0% |
!! | TTGATAGAAAATCGTATATA+AGG | + | chr4.2:12245926-12245945 | MS.gene53497:CDS | 20.0% |
!!! | ACTATTTTTGTAATAGTACA+CGG | - | chr4.2:12244659-12244678 | None:intergenic | 20.0% |
!!! | TTTTTATCTTATCAAAGCAT+TGG | - | chr4.2:12244597-12244616 | None:intergenic | 20.0% |
! | AAAATCGTATATAAGGTTTG+CGG | + | chr4.2:12245933-12245952 | MS.gene53497:CDS | 25.0% |
! | AATTGGAATTTCAGCTTATT+GGG | + | chr4.2:12245726-12245745 | MS.gene53497:CDS | 25.0% |
! | ACCTAATGAAATAATGTACT+TGG | - | chr4.2:12245362-12245381 | None:intergenic | 25.0% |
! | GTTATTAACATATTCCTTCT+TGG | + | chr4.2:12245898-12245917 | MS.gene53497:CDS | 25.0% |
! | TATAATTAATTACCTGCAAC+AGG | - | chr4.2:12244515-12244534 | None:intergenic | 25.0% |
! | TGCTAGTAAGCAATATATTA+CGG | - | chr4.2:12245251-12245270 | None:intergenic | 25.0% |
! | TTGATTATTGGATCTTCAAT+TGG | + | chr4.2:12245709-12245728 | MS.gene53497:CDS | 25.0% |
!! | TTGTATACTATGTGCTATTA+GGG | + | chr4.2:12245974-12245993 | MS.gene53497:CDS | 25.0% |
!! | TTGTTCCATTATGGTTTTTA+GGG | + | chr4.2:12245785-12245804 | MS.gene53497:CDS | 25.0% |
!! | TTTGTTCCATTATGGTTTTT+AGG | + | chr4.2:12245784-12245803 | MS.gene53497:CDS | 25.0% |
ATTGAGATTGTAGCATTCAT+AGG | - | chr4.2:12245511-12245530 | None:intergenic | 30.0% | |
CAATTGGAATTTCAGCTTAT+TGG | + | chr4.2:12245725-12245744 | MS.gene53497:CDS | 30.0% | |
CGTTGCTTATAATATACTCA+AGG | - | chr4.2:12244802-12244821 | None:intergenic | 30.0% | |
CTAATAGCACATAGTATACA+AGG | - | chr4.2:12245975-12245994 | None:intergenic | 30.0% | |
GCCAAGTACATTATTTCATT+AGG | + | chr4.2:12245358-12245377 | MS.gene53497:CDS | 30.0% | |
TAGTAAGCAATATATTACGG+TGG | - | chr4.2:12245248-12245267 | None:intergenic | 30.0% | |
TGCTTATAATATACTCAAGG+AGG | - | chr4.2:12244799-12244818 | None:intergenic | 30.0% | |
TTCTATCAATAGATCCAAGA+AGG | - | chr4.2:12245915-12245934 | None:intergenic | 30.0% | |
TTTAAGAGTTGGGAAAACTA+CGG | + | chr4.2:12244194-12244213 | MS.gene53497:CDS | 30.0% | |
! | ACGCAATTTTTGTTCCATTA+TGG | + | chr4.2:12245776-12245795 | MS.gene53497:CDS | 30.0% |
! | ATTTCATTAGGTGCTTTGAA+AGG | + | chr4.2:12245370-12245389 | MS.gene53497:CDS | 30.0% |
! | CTTGTATACTATGTGCTATT+AGG | + | chr4.2:12245973-12245992 | MS.gene53497:CDS | 30.0% |
! | GTTCTTTTCTTTGCTTATGT+TGG | + | chr4.2:12245136-12245155 | MS.gene53497:CDS | 30.0% |
!! | CAATGCTTTTTGTGTATGAT+TGG | + | chr4.2:12244560-12244579 | MS.gene53497:intron | 30.0% |
AAACTACGGAAAATCTGTCA+TGG | + | chr4.2:12244208-12244227 | MS.gene53497:CDS | 35.0% | |
AAAGGAACTCCCCATAATTT+AGG | - | chr4.2:12245850-12245869 | None:intergenic | 35.0% | |
AATTTAGGCTTCTTTGCCAT+TGG | - | chr4.2:12245835-12245854 | None:intergenic | 35.0% | |
ACAAAGTAGAAATCGACATG+AGG | - | chr4.2:12245588-12245607 | None:intergenic | 35.0% | |
ACAGAAGACAGATAACAAAG+CGG | - | chr4.2:12244468-12244487 | None:intergenic | 35.0% | |
ATAGATAAAGAAGGTAGCCA+AGG | - | chr4.2:12245877-12245896 | None:intergenic | 35.0% | |
ATTGAGCCAATAAGACCAAT+AGG | - | chr4.2:12245217-12245236 | None:intergenic | 35.0% | |
CATAACATGAACCCTGATTA+TGG | + | chr4.2:12244899-12244918 | MS.gene53497:CDS | 35.0% | |
CGTAAACTGAGAATAGTTCT+CGG | - | chr4.2:12245080-12245099 | None:intergenic | 35.0% | |
CTTCTCTTCATAGTAATTGC+TGG | + | chr4.2:12245037-12245056 | MS.gene53497:CDS | 35.0% | |
CTTTGATGCAGTTTCAACAA+TGG | + | chr4.2:12245159-12245178 | MS.gene53497:CDS | 35.0% | |
GATAAGAGTAAACATAGCAG+TGG | + | chr4.2:12246030-12246049 | MS.gene53497:CDS | 35.0% | |
GCAAAGAAGCCTAAATTATG+GGG | + | chr4.2:12245838-12245857 | MS.gene53497:CDS | 35.0% | |
GCATACTTAAAAGTTGAGCT+AGG | + | chr4.2:12244740-12244759 | MS.gene53497:CDS | 35.0% | |
GGCAAAGAAGCCTAAATTAT+GGG | + | chr4.2:12245837-12245856 | MS.gene53497:CDS | 35.0% | |
GTAAACTGAGAATAGTTCTC+GGG | - | chr4.2:12245079-12245098 | None:intergenic | 35.0% | |
TAAATTATGGGGAGTTCCTT+TGG | + | chr4.2:12245849-12245868 | MS.gene53497:CDS | 35.0% | |
TCAAAAAAACGACTTCTTCC+CGG | + | chr4.2:12244163-12244182 | MS.gene53497:CDS | 35.0% | |
TGGCAAAGAAGCCTAAATTA+TGG | + | chr4.2:12245836-12245855 | MS.gene53497:CDS | 35.0% | |
TTTAGTGCTGTAAATGGCAA+GGG | - | chr4.2:12244969-12244988 | None:intergenic | 35.0% | |
! | ATTCTCAGTTTACGCCTTTT+GGG | + | chr4.2:12245086-12245105 | MS.gene53497:CDS | 35.0% |
! | TATTCTCAGTTTACGCCTTT+TGG | + | chr4.2:12245085-12245104 | MS.gene53497:CDS | 35.0% |
!! | GACATTCCTATTGGTCTTAT+TGG | + | chr4.2:12245208-12245227 | MS.gene53497:CDS | 35.0% |
!! | GTGTGTCTTGTGTTGATTAT+TGG | + | chr4.2:12245697-12245716 | MS.gene53497:CDS | 35.0% |
!! | TCTGGAATTTTTGTGCTTAC+CGG | + | chr4.2:12244380-12244399 | MS.gene53497:CDS | 35.0% |
!! | TGCTTTGAAAGGAATGACAA+CGG | + | chr4.2:12245381-12245400 | MS.gene53497:CDS | 35.0% |
!! | TTGTTGTCACTGTTTTGTTC+AGG | + | chr4.2:12244707-12244726 | MS.gene53497:intron | 35.0% |
!!! | TCTTTGGCTTTTTGTTCCAA+TGG | + | chr4.2:12245816-12245835 | MS.gene53497:CDS | 35.0% |
AAACGATCCTTCAACCGAAA+AGG | - | chr4.2:12244239-12244258 | None:intergenic | 40.0% | |
ACCATACCATGAAACCCAAA+AGG | - | chr4.2:12245103-12245122 | None:intergenic | 40.0% | |
AGACTTTGTGGCCTTTATAG+CGG | + | chr4.2:12244763-12244782 | MS.gene53497:CDS | 40.0% | |
AGAGCCTTTAGTGCTGTAAA+TGG | - | chr4.2:12244975-12244994 | None:intergenic | 40.0% | |
AGATAACAAAGCGGAGATAC+CGG | - | chr4.2:12244459-12244478 | None:intergenic | 40.0% | |
AGATGAAGAAGACGCTGAAT+TGG | + | chr4.2:12244318-12244337 | MS.gene53497:CDS | 40.0% | |
CAAGTGGGGTAACTACAAAA+GGG | + | chr4.2:12245656-12245675 | MS.gene53497:CDS | 40.0% | |
CAATAGGAATGTCTCTACCA+GGG | - | chr4.2:12245201-12245220 | None:intergenic | 40.0% | |
CCTGTCCCTAAAAACCATAA+TGG | - | chr4.2:12245793-12245812 | None:intergenic | 40.0% | |
CGTATATAAGGTTTGCGGTT+TGG | + | chr4.2:12245938-12245957 | MS.gene53497:CDS | 40.0% | |
CTTTAGTGCTGTAAATGGCA+AGG | - | chr4.2:12244970-12244989 | None:intergenic | 40.0% | |
GCACTAAAAGCAACAGAGAA+AGG | - | chr4.2:12245322-12245341 | None:intergenic | 40.0% | |
TCAAGTGGGGTAACTACAAA+AGG | + | chr4.2:12245655-12245674 | MS.gene53497:CDS | 40.0% | |
TCATCAACAAGAGCAAACCA+AGG | - | chr4.2:12245475-12245494 | None:intergenic | 40.0% | |
TGAGAAGCAATGGAACAAGA+TGG | + | chr4.2:12246068-12246087 | MS.gene53497:CDS | 40.0% | |
! | CTGTCATGGAAACACCTTTT+CGG | + | chr4.2:12244222-12244241 | MS.gene53497:CDS | 40.0% |
! | CTTGCCATTTACAGCACTAA+AGG | + | chr4.2:12244968-12244987 | MS.gene53497:CDS | 40.0% |
! | GCTCTTGTTGATGAAAGAAC+AGG | + | chr4.2:12245481-12245500 | MS.gene53497:CDS | 40.0% |
! | TAGTGCTGTTGGAATGGATT+GGG | + | chr4.2:12245336-12245355 | MS.gene53497:CDS | 40.0% |
! | TGAGGCGTTACTATTCAAGT+GGG | + | chr4.2:12245641-12245660 | MS.gene53497:CDS | 40.0% |
! | TTAGTGCTGTTGGAATGGAT+TGG | + | chr4.2:12245335-12245354 | MS.gene53497:CDS | 40.0% |
!! | AGGAATGACAACGGTTTTGT+TGG | + | chr4.2:12245390-12245409 | MS.gene53497:CDS | 40.0% |
!! | CCATTATGGTTTTTAGGGAC+AGG | + | chr4.2:12245790-12245809 | MS.gene53497:CDS | 40.0% |
!! | TGCTTTTAGTGCTGTTGGAA+TGG | + | chr4.2:12245330-12245349 | MS.gene53497:CDS | 40.0% |
!! | TTGTCACTGTTTTGTTCAGG+TGG | + | chr4.2:12244710-12244729 | MS.gene53497:intron | 40.0% |
!! | TTTGGCATTGGTTCAGTTGT+CGG | + | chr4.2:12244356-12244375 | MS.gene53497:CDS | 40.0% |
!!! | ATGACAACGGTTTTGTTGGT+TGG | + | chr4.2:12245394-12245413 | MS.gene53497:CDS | 40.0% |
!!! | GTTTTGTTGGTTGGTTCTGT+GGG | + | chr4.2:12245403-12245422 | MS.gene53497:CDS | 40.0% |
!!! | TCTGTTGCTTTTAGTGCTGT+TGG | + | chr4.2:12245325-12245344 | MS.gene53497:CDS | 40.0% |
!!! | TTTACGCCTTTTGGGTTTCA+TGG | + | chr4.2:12245094-12245113 | MS.gene53497:CDS | 40.0% |
AAAAAACGACTTCTTCCCGG+AGG | + | chr4.2:12244166-12244185 | MS.gene53497:CDS | 45.0% | |
AACAGTGAGCATGGATGGAT+TGG | + | chr4.2:12245751-12245770 | MS.gene53497:CDS | 45.0% | |
AACTCTTAAACGACTCCTCC+GGG | - | chr4.2:12244184-12244203 | None:intergenic | 45.0% | |
ACAAAGGACAACACAACTGC+CGG | - | chr4.2:12244431-12244450 | None:intergenic | 45.0% | |
AGTTGAGCTAGGAGACTTTG+TGG | + | chr4.2:12244751-12244770 | MS.gene53497:CDS | 45.0% | |
ATACTCAAGGAGGATGTTCC+CGG | - | chr4.2:12244789-12244808 | None:intergenic | 45.0% | |
CAACTCTTAAACGACTCCTC+CGG | - | chr4.2:12244185-12244204 | None:intergenic | 45.0% | |
CAATGGAACAAGATGGAGCA+AGG | + | chr4.2:12246075-12246094 | MS.gene53497:CDS | 45.0% | |
CCAATAGGAATGTCTCTACC+AGG | - | chr4.2:12245202-12245221 | None:intergenic | 45.0% | |
CCTGGTAGAGACATTCCTAT+TGG | + | chr4.2:12245199-12245218 | MS.gene53497:CDS | 45.0% | |
CGATGCGATGTAGTTGAAGA+CGG | - | chr4.2:12244999-12245018 | None:intergenic | 45.0% | |
CTGAGAATAGTTCTCGGGTT+TGG | - | chr4.2:12245074-12245093 | None:intergenic | 45.0% | |
GAAACGATCCACTGATCATG+CGG | + | chr4.2:12244262-12244281 | MS.gene53497:CDS | 45.0% | |
GAAGAAGACGCTGAATTGGT+GGG | + | chr4.2:12244322-12244341 | MS.gene53497:CDS | 45.0% | |
GCAGAGGGTAGCAAAATAAG+AGG | - | chr4.2:12244846-12244865 | None:intergenic | 45.0% | |
GGAGGAGTCGTTTAAGAGTT+GGG | + | chr4.2:12244184-12244203 | MS.gene53497:CDS | 45.0% | |
GGTCAAGATGGCCATAATCA+GGG | - | chr4.2:12244913-12244932 | None:intergenic | 45.0% | |
GTAAATGGCAAGGGTTGTGA+TGG | - | chr4.2:12244960-12244979 | None:intergenic | 45.0% | |
TATTGGGCTAACAGTGAGCA+TGG | + | chr4.2:12245742-12245761 | MS.gene53497:CDS | 45.0% | |
TCAACAAGAGCAAACCAAGG+TGG | - | chr4.2:12245472-12245491 | None:intergenic | 45.0% | |
TGAAGAAGACGCTGAATTGG+TGG | + | chr4.2:12244321-12244340 | MS.gene53497:CDS | 45.0% | |
TGAAGAGAAGAACAAGCACG+TGG | - | chr4.2:12245027-12245046 | None:intergenic | 45.0% | |
TGAATTGGTGGGACTTGATG+TGG | + | chr4.2:12244333-12244352 | MS.gene53497:CDS | 45.0% | |
TGCAGTTTCAACAATGGCTG+AGG | + | chr4.2:12245165-12245184 | MS.gene53497:CDS | 45.0% | |
TGGAGATTAAGGCTCGTAGT+GGG | + | chr4.2:12244291-12244310 | MS.gene53497:CDS | 45.0% | |
TTCCATTGCTTCTCAACCTC+CGG | - | chr4.2:12246063-12246082 | None:intergenic | 45.0% | |
! | AGTTAGGGTTTTCGTTGCAG+AGG | - | chr4.2:12244862-12244881 | None:intergenic | 45.0% |
! | ATAAGGTTTGCGGTTTGGAC+AGG | + | chr4.2:12245943-12245962 | MS.gene53497:CDS | 45.0% |
! | GACTTGATGTGGTTTGGCAT+TGG | + | chr4.2:12244344-12244363 | MS.gene53497:CDS | 45.0% |
! | GAGGCGTTACTATTCAAGTG+GGG | + | chr4.2:12245642-12245661 | MS.gene53497:CDS | 45.0% |
! | GGAAACACCTTTTCGGTTGA+AGG | + | chr4.2:12244229-12244248 | MS.gene53497:CDS | 45.0% |
! | GTGAGGCGTTACTATTCAAG+TGG | + | chr4.2:12245640-12245659 | MS.gene53497:CDS | 45.0% |
! | GTTAGGGTTTTCGTTGCAGA+GGG | - | chr4.2:12244861-12244880 | None:intergenic | 45.0% |
! | TAAGGTTTGCGGTTTGGACA+GGG | + | chr4.2:12245944-12245963 | MS.gene53497:CDS | 45.0% |
! | TTTTGTGCTTACCGGACTTG+AGG | + | chr4.2:12244388-12244407 | MS.gene53497:CDS | 45.0% |
!! | ACATAGCAGTGGTTCTGATC+CGG | + | chr4.2:12246041-12246060 | MS.gene53497:CDS | 45.0% |
!! | AGTTGATGGAGTACGGAAGA+GGG | + | chr4.2:12244130-12244149 | MS.gene53497:CDS | 45.0% |
!! | CTGTTACACAGAGTTTGCTG+TGG | + | chr4.2:12244484-12244503 | MS.gene53497:CDS | 45.0% |
!! | GCTTGTAGCCTTAGCACTTT+TGG | + | chr4.2:12245618-12245637 | MS.gene53497:CDS | 45.0% |
!! | TAGCCTTAGCACTTTTGGTG+AGG | + | chr4.2:12245623-12245642 | MS.gene53497:CDS | 45.0% |
!! | TGGCAACAGTTGATGGAGTA+CGG | + | chr4.2:12244123-12244142 | MS.gene53497:CDS | 45.0% |
!! | TTGGCATTGGTTCAGTTGTC+GGG | + | chr4.2:12244357-12244376 | MS.gene53497:CDS | 45.0% |
!! | TTTTAGGGACAGGTGCTCTT+TGG | + | chr4.2:12245800-12245819 | MS.gene53497:CDS | 45.0% |
!!! | GCCTTTTGGGTTTCATGGTA+TGG | + | chr4.2:12245099-12245118 | MS.gene53497:CDS | 45.0% |
!!! | GGTTTTGTTGGTTGGTTCTG+TGG | + | chr4.2:12245402-12245421 | MS.gene53497:CDS | 45.0% |
AGAGGTCCATGATCGTGCTA+CGG | - | chr4.2:12244828-12244847 | None:intergenic | 50.0% | |
ATCCGGAGGTTGAGAAGCAA+TGG | + | chr4.2:12246058-12246077 | MS.gene53497:CDS | 50.0% | |
CAACAGCAACAGGGTCAAGA+TGG | - | chr4.2:12244925-12244944 | None:intergenic | 50.0% | |
CGGAGGAGTCGTTTAAGAGT+TGG | + | chr4.2:12244183-12244202 | MS.gene53497:CDS | 50.0% | |
GAAGGTAGCCAAGGAACCAA+AGG | - | chr4.2:12245868-12245887 | None:intergenic | 50.0% | |
GCTGAGGAAACTAAGAACCC+TGG | + | chr4.2:12245181-12245200 | MS.gene53497:CDS | 50.0% | |
GCTGTGGAAATACCTGTTGC+AGG | + | chr4.2:12244500-12244519 | MS.gene53497:CDS | 50.0% | |
GGGTCAAGATGGCCATAATC+AGG | - | chr4.2:12244914-12244933 | None:intergenic | 50.0% | |
GTACTCACATGATGCCACCT+TGG | + | chr4.2:12245455-12245474 | MS.gene53497:CDS | 50.0% | |
GTGGAGATTAAGGCTCGTAG+TGG | + | chr4.2:12244290-12244309 | MS.gene53497:CDS | 50.0% | |
GTGTTGTCCTTTGTCGTCTC+CGG | + | chr4.2:12244437-12244456 | MS.gene53497:CDS | 50.0% | |
TGAGGACCACAACAGCAACA+GGG | - | chr4.2:12244934-12244953 | None:intergenic | 50.0% | |
TGGTGGGACTTGATGTGGTT+TGG | + | chr4.2:12244338-12244357 | MS.gene53497:CDS | 50.0% | |
TTTGTGGCCTTTATAGCGGC+CGG | + | chr4.2:12244767-12244786 | MS.gene53497:CDS | 50.0% | |
! | ATTGGTTCAGTTGTCGGGTC+TGG | + | chr4.2:12244362-12244381 | MS.gene53497:CDS | 50.0% |
! | GTTGATGGAGTACGGAAGAG+GGG | + | chr4.2:12244131-12244150 | MS.gene53497:CDS | 50.0% |
! | TCTTGACCCTGTTGCTGTTG+TGG | + | chr4.2:12244925-12244944 | MS.gene53497:CDS | 50.0% |
!! | ACGCCTCACCAAAAGTGCTA+AGG | - | chr4.2:12245629-12245648 | None:intergenic | 50.0% |
!! | CAGTTGATGGAGTACGGAAG+AGG | + | chr4.2:12244129-12244148 | MS.gene53497:CDS | 50.0% |
ATCCACTGATCATGCGGAGC+TGG | + | chr4.2:12244268-12244287 | MS.gene53497:CDS | 55.0% | |
CAAGGGTTGTGATGGCTGTG+AGG | - | chr4.2:12244952-12244971 | None:intergenic | 55.0% | |
GATGTTCCCGGCCGCTATAA+AGG | - | chr4.2:12244777-12244796 | None:intergenic | 55.0% | |
GCTTACCGGACTTGAGGCTA+GGG | + | chr4.2:12244394-12244413 | MS.gene53497:CDS | 55.0% | |
GGAGATACCGGAGACGACAA+AGG | - | chr4.2:12244447-12244466 | None:intergenic | 55.0% | |
GGGCTAACAGTGAGCATGGA+TGG | + | chr4.2:12245746-12245765 | MS.gene53497:CDS | 55.0% | |
GTGAGGACCACAACAGCAAC+AGG | - | chr4.2:12244935-12244954 | None:intergenic | 55.0% | |
TGCGGAGCTGGTGGAGATTA+AGG | + | chr4.2:12244280-12244299 | MS.gene53497:CDS | 55.0% | |
TGCTTACCGGACTTGAGGCT+AGG | + | chr4.2:12244393-12244412 | MS.gene53497:CDS | 55.0% | |
TTGCTCCCTAGCCTCAAGTC+CGG | - | chr4.2:12244402-12244421 | None:intergenic | 55.0% | |
TTGTGGCCTTTATAGCGGCC+GGG | + | chr4.2:12244768-12244787 | MS.gene53497:CDS | 55.0% | |
! | GGGGAGTTCCTTTGGTTCCT+TGG | + | chr4.2:12245857-12245876 | MS.gene53497:CDS | 55.0% |
!! | CAAGATGGAGCAAGGTGCTG+TGG | + | chr4.2:12246083-12246102 | MS.gene53497:CDS | 55.0% |
!! | TAGCAGTGGTTCTGATCCGG+AGG | + | chr4.2:12246044-12246063 | MS.gene53497:CDS | 55.0% |
CACCAGCTCCGCATGATCAG+TGG | - | chr4.2:12244273-12244292 | None:intergenic | 60.0% | |
CACTGATCATGCGGAGCTGG+TGG | + | chr4.2:12244271-12244290 | MS.gene53497:CDS | 60.0% | |
CTTGAGGCTAGGGAGCAAGC+AGG | + | chr4.2:12244404-12244423 | MS.gene53497:CDS | 60.0% | |
GGTCCATGATCGTGCTACGG+CGG | - | chr4.2:12244825-12244844 | None:intergenic | 60.0% | |
ACGCCGCCGTAGCACGATCA+TGG | + | chr4.2:12244819-12244838 | MS.gene53497:CDS | 65.0% | |
GGCTAGGGAGCAAGCAGGTC+CGG | + | chr4.2:12244409-12244428 | MS.gene53497:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 12244122 | 12246140 | 12244122 | ID=MS.gene53497 |
chr4.2 | mRNA | 12244122 | 12246140 | 12244122 | ID=MS.gene53497.t1;Parent=MS.gene53497 |
chr4.2 | exon | 12244122 | 12244521 | 12244122 | ID=MS.gene53497.t1.exon1;Parent=MS.gene53497.t1 |
chr4.2 | CDS | 12244122 | 12244521 | 12244122 | ID=cds.MS.gene53497.t1;Parent=MS.gene53497.t1 |
chr4.2 | exon | 12244729 | 12246140 | 12244729 | ID=MS.gene53497.t1.exon2;Parent=MS.gene53497.t1 |
chr4.2 | CDS | 12244729 | 12246140 | 12244729 | ID=cds.MS.gene53497.t1;Parent=MS.gene53497.t1 |
Gene Sequence |
Protein sequence |