Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53989.t1 | XP_003615711.1 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.00E+00 | 1184.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53989.t1 | P19252 | 93.0 | 583 | 29 | 2 | 1 | 572 | 1 | 582 | 0.0e+00 | 1129.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53989.t1 | G7JZK0 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0e+00 | 1184.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene30955 | MS.gene53989 | PPI |
MS.gene53989 | MS.gene052122 | PPI |
MS.gene021114 | MS.gene53989 | PPI |
MS.gene004045 | MS.gene53989 | PPI |
MS.gene53989 | MS.gene071169 | PPI |
MS.gene79217 | MS.gene53989 | PPI |
MS.gene53989 | MS.gene045117 | PPI |
MS.gene45489 | MS.gene53989 | PPI |
MS.gene31156 | MS.gene53989 | PPI |
MS.gene052207 | MS.gene53989 | PPI |
MS.gene75475 | MS.gene53989 | PPI |
MS.gene53989 | MS.gene41176 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53989.t1 | MTR_5g071360 | 97.774 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0 | 1188 |
MS.gene53989.t1 | MTR_5g071360 | 97.451 | 510 | 2 | 1 | 1 | 499 | 1 | 510 | 0.0 | 1038 |
MS.gene53989.t1 | MTR_3g464580 | 84.642 | 586 | 77 | 3 | 1 | 573 | 1 | 586 | 0.0 | 1033 |
MS.gene53989.t1 | MTR_3g464580 | 85.855 | 509 | 60 | 2 | 1 | 497 | 1 | 509 | 0.0 | 919 |
MS.gene53989.t1 | MTR_3g087220 | 76.799 | 556 | 118 | 1 | 1 | 545 | 1 | 556 | 0.0 | 915 |
MS.gene53989.t1 | MTR_3g464580 | 85.268 | 448 | 53 | 3 | 1 | 436 | 1 | 447 | 0.0 | 798 |
MS.gene53989.t1 | MTR_5g069310 | 93.662 | 142 | 9 | 0 | 432 | 573 | 2 | 143 | 6.31e-93 | 281 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53989.t1 | AT3G47340 | 81.739 | 575 | 87 | 2 | 1 | 564 | 1 | 568 | 0.0 | 994 |
MS.gene53989.t1 | AT5G10240 | 77.719 | 570 | 116 | 1 | 1 | 559 | 1 | 570 | 0.0 | 946 |
MS.gene53989.t1 | AT5G10240 | 77.193 | 570 | 118 | 2 | 1 | 559 | 1 | 569 | 0.0 | 936 |
MS.gene53989.t1 | AT5G65010 | 78.545 | 550 | 107 | 1 | 1 | 539 | 1 | 550 | 0.0 | 931 |
MS.gene53989.t1 | AT5G65010 | 78.584 | 551 | 106 | 2 | 1 | 539 | 1 | 551 | 0.0 | 928 |
MS.gene53989.t1 | AT3G47340 | 83.661 | 508 | 72 | 1 | 1 | 497 | 1 | 508 | 0.0 | 907 |
MS.gene53989.t1 | AT3G47340 | 83.213 | 417 | 59 | 1 | 1 | 406 | 1 | 417 | 0.0 | 743 |
MS.gene53989.t1 | AT3G47340 | 86.711 | 301 | 40 | 0 | 106 | 406 | 2 | 302 | 0.0 | 561 |
Find 146 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGCAAAAGTTGATTTAT+TGG | 0.146655 | 5.2:+60321640 | None:intergenic |
GCCATAGTTGATCCTGCTTC+TGG | 0.190792 | 5.2:-60324037 | MS.gene53989:CDS |
TAGTATGCTTCCTTGGTGTT+TGG | 0.294339 | 5.2:+60320976 | None:intergenic |
GCTGCTTCCTGAGAGCTTCA+TGG | 0.298254 | 5.2:+60323547 | None:intergenic |
CTTGGTGTTTGGGGTGTTGT+GGG | 0.299374 | 5.2:+60320987 | None:intergenic |
AGTATGCTTCCTTGGTGTTT+GGG | 0.315403 | 5.2:+60320977 | None:intergenic |
TGGTGAAACTCTTCCTTGTT+TGG | 0.317778 | 5.2:+60321802 | None:intergenic |
CCAATCCCCAACCAATGTAT+AGG | 0.322005 | 5.2:+60323262 | None:intergenic |
CTGTTGAGTGGGATGCTTCT+TGG | 0.325762 | 5.2:-60320573 | MS.gene53989:CDS |
TCCCCATTGCTCAGCAGCTT+TGG | 0.326885 | 5.2:+60322496 | None:intergenic |
CCTTGGTGTTTGGGGTGTTG+TGG | 0.329281 | 5.2:+60320986 | None:intergenic |
AGAAGCCAGAGTTCCATTCT+TGG | 0.330224 | 5.2:-60321612 | MS.gene53989:CDS |
TGGCTCTCTGGCAATCATAT+TGG | 0.332558 | 5.2:+60321660 | None:intergenic |
TGAGTTTACCTTTACTGTTC+AGG | 0.336514 | 5.2:-60322266 | MS.gene53989:intron |
GAAGGATCTGATGAGATATT+TGG | 0.338455 | 5.2:-60321850 | MS.gene53989:CDS |
CCTATACATTGGTTGGGGAT+TGG | 0.339541 | 5.2:-60323262 | MS.gene53989:CDS |
CTTGATTAGTACGAGGAATA+TGG | 0.350601 | 5.2:-60323387 | MS.gene53989:intron |
GTTGGTTATAGTTGGATTGA+TGG | 0.352635 | 5.2:-60321174 | MS.gene53989:CDS |
CTCTGAATGGCAACCTCAAC+AGG | 0.354874 | 5.2:+60320427 | None:intergenic |
TGACCTTGCGGCATGTTTCT+TGG | 0.358607 | 5.2:+60321782 | None:intergenic |
ACCTGAAGGATCAAGGTTCT+TGG | 0.360091 | 5.2:+60320549 | None:intergenic |
TCAGCAAGGCTAACTGTTCC+TGG | 0.360471 | 5.2:-60320628 | MS.gene53989:CDS |
CCATAGTTGATCCTGCTTCT+GGG | 0.367703 | 5.2:-60324036 | MS.gene53989:CDS |
CACCAAAGCTGCTGAGCAAT+GGG | 0.378159 | 5.2:-60322498 | MS.gene53989:CDS |
CTTATGATCCTCTAGCTTTG+AGG | 0.378272 | 5.2:-60322993 | MS.gene53989:CDS |
TGTTCTACTATCTGGAGGTT+TGG | 0.381315 | 5.2:-60322564 | MS.gene53989:CDS |
TCCAAGAACCTTGATCCTTC+AGG | 0.384997 | 5.2:-60320550 | MS.gene53989:CDS |
TGGTGGAGCCCACTCCAGTC+AGG | 0.386539 | 5.2:+60324094 | None:intergenic |
TTGATGACTGATGTGCCTTT+TGG | 0.392532 | 5.2:-60322587 | MS.gene53989:CDS |
GTCTGGATTCAGGTTCTGTT+TGG | 0.394150 | 5.2:-60323158 | MS.gene53989:intron |
CTTTGAGAGGTTCTTCCCTC+AGG | 0.394486 | 5.2:-60320941 | MS.gene53989:intron |
AACTTCCCTATACATTGGTT+GGG | 0.395146 | 5.2:-60323268 | MS.gene53989:CDS |
TTAAATCACTTGGTGTCAAA+TGG | 0.396039 | 5.2:-60321885 | MS.gene53989:CDS |
CCATTGCTCAGCAGCTTTGG+TGG | 0.397285 | 5.2:+60322499 | None:intergenic |
TATTGATCCCGAGAACAAAA+TGG | 0.398992 | 5.2:-60321561 | MS.gene53989:intron |
TGGAGGTTTGGACTCATCAT+TGG | 0.403230 | 5.2:-60322552 | MS.gene53989:CDS |
CTTAGTACCTTTGGCAGGTA+AGG | 0.415335 | 5.2:+60321312 | None:intergenic |
AAGTTGATTTATTGGCTCTC+TGG | 0.421158 | 5.2:+60321648 | None:intergenic |
GTGATGGTGTTGGTTATAGT+TGG | 0.421617 | 5.2:-60321182 | MS.gene53989:CDS |
CAGCAGCTTTGGTGGTTGCT+AGG | 0.422326 | 5.2:+60322507 | None:intergenic |
TCTGTAGTAGTATGCTTCCT+TGG | 0.425516 | 5.2:+60320969 | None:intergenic |
CAATCCCCAACCAATGTATA+GGG | 0.426353 | 5.2:+60323263 | None:intergenic |
TGAAGCACCGTGGCCCTGAC+TGG | 0.426940 | 5.2:-60324108 | MS.gene53989:intron |
CCCAGAAGCAGGATCAACTA+TGG | 0.430437 | 5.2:+60324036 | None:intergenic |
GTAGGGCTCGCCTGATCTTA+AGG | 0.439940 | 5.2:-60322329 | MS.gene53989:intron |
ATAAACTCCTTGTCCAAGAA+TGG | 0.445681 | 5.2:+60321599 | None:intergenic |
TCCAGTTCGGAATGTGTGAT+TGG | 0.455023 | 5.2:+60323521 | None:intergenic |
CTCATTCTGTGTTGGACTTG+AGG | 0.467729 | 5.2:-60322462 | MS.gene53989:intron |
TGTGGTATACTTGCTGTGCT+TGG | 0.469074 | 5.2:-60325729 | MS.gene53989:CDS |
GGAATATGGCGAAGACTTTG+TGG | 0.469379 | 5.2:-60323373 | MS.gene53989:CDS |
CATGCAACAGTTGGTCCTCC+AGG | 0.472328 | 5.2:+60320610 | None:intergenic |
TAACTTCCCTATACATTGGT+TGG | 0.473236 | 5.2:-60323269 | MS.gene53989:CDS |
ATTTGAGAAGATTATACCAT+TGG | 0.476016 | 5.2:-60320458 | MS.gene53989:CDS |
ACCAATCACACATTCCGAAC+TGG | 0.478435 | 5.2:-60323522 | MS.gene53989:CDS |
TAAATCACTTGGTGTCAAAT+GGG | 0.481025 | 5.2:-60321884 | MS.gene53989:CDS |
ATTGGAAGCTTCTCCTGTTG+AGG | 0.481461 | 5.2:-60320440 | MS.gene53989:CDS |
CTCAAAGCTAGAGGATCATA+AGG | 0.487494 | 5.2:+60322994 | None:intergenic |
AATTACTTAGTACCTTTGGC+AGG | 0.492602 | 5.2:+60321307 | None:intergenic |
ATAGTGGCTAGAGATGCTAT+TGG | 0.494639 | 5.2:-60323294 | MS.gene53989:CDS |
GGCTCGCCTGATCTTAAGGC+TGG | 0.495183 | 5.2:-60322325 | MS.gene53989:CDS |
AGAGGTTGATCCCCAGAAGC+AGG | 0.502947 | 5.2:+60324025 | None:intergenic |
CTGATCCTACTAGAGCTAAG+AGG | 0.503237 | 5.2:-60325701 | MS.gene53989:CDS |
TTTACAACCATGAAGCTCTC+AGG | 0.505927 | 5.2:-60323554 | MS.gene53989:CDS |
AAACTACACTCATTCTGTGT+TGG | 0.506077 | 5.2:-60322470 | MS.gene53989:CDS |
CACCGTGGCCCTGACTGGAG+TGG | 0.507750 | 5.2:-60324103 | MS.gene53989:CDS |
CCACCAAAGCTGCTGAGCAA+TGG | 0.508023 | 5.2:-60322499 | MS.gene53989:CDS |
ACCGTGGCCCTGACTGGAGT+GGG | 0.511159 | 5.2:-60324102 | MS.gene53989:CDS |
AAGATGGTGGATTTCGAAGA+TGG | 0.512006 | 5.2:-60323056 | MS.gene53989:CDS |
CATCACAATCACTTCCAGTT+CGG | 0.516313 | 5.2:+60323508 | None:intergenic |
CATAGTTGATCCTGCTTCTG+GGG | 0.518463 | 5.2:-60324035 | MS.gene53989:CDS |
CACCTATGTTTCTTATGTCA+AGG | 0.519137 | 5.2:-60321912 | MS.gene53989:CDS |
TGGTGTTTGGGGTGTTGTGG+GGG | 0.523651 | 5.2:+60320989 | None:intergenic |
CTGCTCTACCTGAAGGATCA+AGG | 0.523757 | 5.2:+60320542 | None:intergenic |
AGAGGATCATAAGGAGCTGA+TGG | 0.524528 | 5.2:+60323003 | None:intergenic |
GATTACAGGCAGTGATAAAG+AGG | 0.524836 | 5.2:-60322610 | MS.gene53989:intron |
GGTGGAGCCCACTCCAGTCA+GGG | 0.525107 | 5.2:+60324095 | None:intergenic |
TACATTGGTTGGGGATTGGA+TGG | 0.526541 | 5.2:-60323258 | MS.gene53989:intron |
AGCAGTTACCTGAACAGTAA+AGG | 0.527338 | 5.2:+60322258 | None:intergenic |
CATTTGTACTCTAGCAAAGA+TGG | 0.527462 | 5.2:-60323072 | MS.gene53989:CDS |
CGAACCCTCTTAGCTCTAGT+AGG | 0.529513 | 5.2:+60325696 | None:intergenic |
GAAGATGGTACAATCCTCCT+TGG | 0.531078 | 5.2:-60323041 | MS.gene53989:CDS |
ACTTCCCTATACATTGGTTG+GGG | 0.533129 | 5.2:-60323267 | MS.gene53989:CDS |
CTTGTCCAAGAATGGAACTC+TGG | 0.535205 | 5.2:+60321607 | None:intergenic |
CGAAGACTTTGTGGACAAGT+TGG | 0.538479 | 5.2:-60323364 | MS.gene53989:CDS |
TTGTGATGTTATTGCACACT+TGG | 0.539309 | 5.2:-60323493 | MS.gene53989:intron |
CCAGATAGTAGAACACCAAA+AGG | 0.540119 | 5.2:+60322572 | None:intergenic |
GCCCACTCCAGTCAGGGCCA+CGG | 0.540446 | 5.2:+60324101 | None:intergenic |
AAAAGCAGTCACCATGTTGG+TGG | 0.543353 | 5.2:+60324077 | None:intergenic |
TTTGGTGTTCTACTATCTGG+AGG | 0.543498 | 5.2:-60322569 | MS.gene53989:CDS |
CAGCTCAAACTAGCTCTGAA+TGG | 0.544212 | 5.2:+60320414 | None:intergenic |
GGAGTAACTTCCCTATACAT+TGG | 0.550845 | 5.2:-60323273 | MS.gene53989:CDS |
CAGAGTTCCATTCTTGGACA+AGG | 0.551331 | 5.2:-60321606 | MS.gene53989:CDS |
TTGGTGTTTGGGGTGTTGTG+GGG | 0.552196 | 5.2:+60320988 | None:intergenic |
CACAGCAAAAGCTGTTGAGT+GGG | 0.555110 | 5.2:-60320584 | MS.gene53989:CDS |
ATCATAAGGAGCTGATGGAA+TGG | 0.556071 | 5.2:+60323008 | None:intergenic |
ACTCATGGTGAACAGTTCCT+AGG | 0.556585 | 5.2:+60322284 | None:intergenic |
GCTGTGCTGCATGCAACAGT+TGG | 0.559213 | 5.2:+60320601 | None:intergenic |
GACTTTGTGGACAAGTTGGA+TGG | 0.567027 | 5.2:-60323360 | MS.gene53989:CDS |
TTCCTTGACATAAGAAACAT+AGG | 0.569230 | 5.2:+60321910 | None:intergenic |
AGGATTCTCTTCATCATCAA+AGG | 0.569332 | 5.2:+60321332 | None:intergenic |
TTTGAGGCATGCCTTTGAGA+AGG | 0.570418 | 5.2:-60322977 | MS.gene53989:intron |
GGTGTCAAATGGGTAATCTC+TGG | 0.572109 | 5.2:-60321874 | MS.gene53989:CDS |
GAACAATTCAGTGATGGTGT+TGG | 0.577943 | 5.2:-60321192 | MS.gene53989:CDS |
GTATGCTTCCTTGGTGTTTG+GGG | 0.580346 | 5.2:+60320978 | None:intergenic |
TATGAATCATACCTTCTCAA+AGG | 0.580405 | 5.2:+60322966 | None:intergenic |
CTTTCACAAAGCACCAAACA+AGG | 0.587961 | 5.2:-60321815 | MS.gene53989:CDS |
GATAGGATGATGCTTAATGC+TGG | 0.589317 | 5.2:-60321021 | MS.gene53989:CDS |
TGATCCTACTAGAGCTAAGA+GGG | 0.590868 | 5.2:-60325700 | MS.gene53989:intron |
AAATGGGTAATCTCTGGTGA+AGG | 0.594753 | 5.2:-60321868 | MS.gene53989:CDS |
GCACAGCAAAAGCTGTTGAG+TGG | 0.598571 | 5.2:-60320585 | MS.gene53989:CDS |
GGATGGTATAGATGCAATTG+AGG | 0.599373 | 5.2:-60321986 | MS.gene53989:CDS |
TGAGAAGTATATTCTGAGGA+AGG | 0.602559 | 5.2:-60321355 | MS.gene53989:CDS |
CCTTCAGGTAGAGCAGCACT+TGG | 0.604084 | 5.2:-60320535 | MS.gene53989:CDS |
GAACAGTAAAGGTAAACTCA+TGG | 0.604362 | 5.2:+60322269 | None:intergenic |
AAAGAAGTTGCAGACTACCT+AGG | 0.604439 | 5.2:-60322301 | MS.gene53989:CDS |
TCGTGATAACAGTTACATAG+TGG | 0.611665 | 5.2:-60323310 | MS.gene53989:CDS |
ACTACAGAATGATCTTTGAG+AGG | 0.611737 | 5.2:-60320954 | MS.gene53989:CDS |
TCAAGGAAGATTAAATCACT+TGG | 0.611830 | 5.2:-60321895 | MS.gene53989:CDS |
TAAACATATACTACAATGTG+TGG | 0.612941 | 5.2:-60325747 | None:intergenic |
GGATCTGATGAGATATTTGG+TGG | 0.613587 | 5.2:-60321847 | MS.gene53989:CDS |
TTATGAAAACCAGAAAACCT+TGG | 0.617746 | 5.2:-60320497 | MS.gene53989:CDS |
CAGAAGGAACAATTCAGTGA+TGG | 0.617988 | 5.2:-60321198 | MS.gene53989:CDS |
TTGTACTCTAGCAAAGATGG+TGG | 0.620516 | 5.2:-60323069 | MS.gene53989:CDS |
AGGTGTGCTTGCTCTAATTG+TGG | 0.620797 | 5.2:+60321930 | None:intergenic |
CCACAACACCCCAAACACCA+AGG | 0.622582 | 5.2:-60320986 | MS.gene53989:CDS |
GATTTGTCTTCATTAAAGAG+AGG | 0.625391 | 5.2:+60324007 | None:intergenic |
TTGCTAGAGTACAAATGACC+AGG | 0.627197 | 5.2:+60323078 | None:intergenic |
CCAAGTGCTGCTCTACCTGA+AGG | 0.631267 | 5.2:+60320535 | None:intergenic |
AGAGAATCCTTACCTGCCAA+AGG | 0.637793 | 5.2:-60321319 | MS.gene53989:intron |
AAGGCATGCCTCAAAGCTAG+AGG | 0.643083 | 5.2:+60322985 | None:intergenic |
ACGAGTATCCAATAGAACAA+AGG | 0.647672 | 5.2:+60323329 | None:intergenic |
GATCAACTATGGCTAACCGT+TGG | 0.653817 | 5.2:+60324047 | None:intergenic |
AGACAAATCTGTCATTGTCA+CGG | 0.657965 | 5.2:-60323993 | MS.gene53989:intron |
CAATCCTCCTTGGTACTCTG+AGG | 0.659419 | 5.2:-60323031 | MS.gene53989:CDS |
TCACCAAGAAACATGCCGCA+AGG | 0.661739 | 5.2:-60321785 | MS.gene53989:intron |
GAATTGAGAAGTATATTCTG+AGG | 0.663370 | 5.2:-60321359 | MS.gene53989:CDS |
CTAGAGTACAAATGACCAGG+TGG | 0.679392 | 5.2:+60323081 | None:intergenic |
TCAACAGGAGAAGCTTCCAA+TGG | 0.679614 | 5.2:+60320442 | None:intergenic |
TAGAGTACAAATGACCAGGT+GGG | 0.692112 | 5.2:+60323082 | None:intergenic |
TGGAGTGGGCTCCACCAACA+TGG | 0.697527 | 5.2:-60324088 | MS.gene53989:CDS |
TCACATCATAAGTTTCAACA+TGG | 0.707488 | 5.2:+60321953 | None:intergenic |
ACCAAAGCTGCTGAGCAATG+GGG | 0.728934 | 5.2:-60322497 | MS.gene53989:CDS |
GCAAGGCTAACTGTTCCTGG+AGG | 0.745250 | 5.2:-60320625 | MS.gene53989:CDS |
GGAATGGCCTCAGAGTACCA+AGG | 0.760433 | 5.2:+60323024 | None:intergenic |
ATGGCCTCAGAGTACCAAGG+AGG | 0.761965 | 5.2:+60323027 | None:intergenic |
CGTAACAGATTGAAGCACCG+TGG | 0.776414 | 5.2:-60324118 | MS.gene53989:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCCATAAATTAAATTATA+AGG | + | chr5.2:60322943-60322962 | None:intergenic | 10.0% |
!! | ATTATGAAATCAATAATATA+TGG | - | chr5.2:60324132-60324151 | MS.gene53989:intron | 10.0% |
!!! | ATAAATTTGTTTTCTTAATA+CGG | - | chr5.2:60320729-60320748 | MS.gene53989:intron | 10.0% |
!!! | TTACCTTATAATTTAATTTA+TGG | - | chr5.2:60322937-60322956 | MS.gene53989:intron | 10.0% |
!! | AATATAATCATATATGTCAA+TGG | + | chr5.2:60325347-60325366 | None:intergenic | 15.0% |
!! | TAACATAATCATTATTGTTA+CGG | + | chr5.2:60322540-60322559 | None:intergenic | 15.0% |
!! | TAGTTAAAAATTTCAATCAT+TGG | + | chr5.2:60321321-60321340 | None:intergenic | 15.0% |
!! | TTATCAAAAACAAAATATTG+AGG | + | chr5.2:60321806-60321825 | None:intergenic | 15.0% |
!!! | AAAAACAACTATTTTGTTTT+CGG | + | chr5.2:60324669-60324688 | None:intergenic | 15.0% |
!!! | AAGTTTATGTTACTTATAAT+TGG | - | chr5.2:60325085-60325104 | MS.gene53989:intron | 15.0% |
!!! | ACTATTTTATCTTACAATTA+GGG | - | chr5.2:60324085-60324104 | MS.gene53989:CDS | 15.0% |
!!! | ATTATTGGTAAATTTTTTAG+TGG | - | chr5.2:60321637-60321656 | MS.gene53989:CDS | 15.0% |
!!! | CTATTTTCTTAAATTATTAC+CGG | - | chr5.2:60325376-60325395 | MS.gene53989:intron | 15.0% |
!!! | CTTTGATTTAATAATTTGTT+CGG | - | chr5.2:60322693-60322712 | MS.gene53989:intron | 15.0% |
!!! | TACTATTTTATCTTACAATT+AGG | - | chr5.2:60324084-60324103 | MS.gene53989:CDS | 15.0% |
!!! | TGTTTTTGATAAACTAATAT+TGG | - | chr5.2:60321814-60321833 | MS.gene53989:CDS | 15.0% |
!!! | TTAATTAGTTTAATTAACCA+TGG | - | chr5.2:60321468-60321487 | MS.gene53989:intron | 15.0% |
!!! | TTATTGGTAAATTTTTTAGT+GGG | - | chr5.2:60321638-60321657 | MS.gene53989:CDS | 15.0% |
!! | ATTGAACAACAAAGATTAAA+AGG | - | chr5.2:60321691-60321710 | MS.gene53989:intron | 20.0% |
!! | CTTGTTTAATCTAAATTGAT+AGG | + | chr5.2:60321517-60321536 | None:intergenic | 20.0% |
!! | GATTTAGTATGTCATATAAA+TGG | + | chr5.2:60322192-60322211 | None:intergenic | 20.0% |
!! | GTAATTTATAAAAAAAGACG+TGG | - | chr5.2:60321920-60321939 | MS.gene53989:CDS | 20.0% |
!! | TGAAATTAAGAATGCTAAAT+AGG | + | chr5.2:60320520-60320539 | None:intergenic | 20.0% |
!! | TTATTGAAAAATCAGGTAAA+TGG | - | chr5.2:60322573-60322592 | MS.gene53989:CDS | 20.0% |
!! | TTCATGCAATTATATTCATA+TGG | - | chr5.2:60322415-60322434 | MS.gene53989:intron | 20.0% |
!! | TTTGTCATTATTGAAAAATC+AGG | - | chr5.2:60322566-60322585 | MS.gene53989:CDS | 20.0% |
!!! | ATTTACTTAGCTTTTCATTA+TGG | - | chr5.2:60320952-60320971 | MS.gene53989:CDS | 20.0% |
!!! | CATAAATTAATTTTGATGCA+CGG | + | chr5.2:60320709-60320728 | None:intergenic | 20.0% |
!!! | CTAATTTTAATATGCAAAAC+TGG | - | chr5.2:60322446-60322465 | MS.gene53989:intron | 20.0% |
!!! | TCTATTGATTTATGCAAAAT+TGG | - | chr5.2:60324881-60324900 | MS.gene53989:intron | 20.0% |
! | AACCATGGTAACTTTATATT+GGG | - | chr5.2:60321483-60321502 | MS.gene53989:intron | 25.0% |
! | AAGACGACATAATTTAACAA+GGG | - | chr5.2:60325463-60325482 | MS.gene53989:intron | 25.0% |
! | AAGACTTTGATAAGATAAGT+GGG | - | chr5.2:60321534-60321553 | MS.gene53989:intron | 25.0% |
! | AATATTAAGACCGACATTAA+AGG | + | chr5.2:60323789-60323808 | None:intergenic | 25.0% |
! | AATGATTTAATCGGTTGAAT+TGG | - | chr5.2:60323984-60324003 | MS.gene53989:intron | 25.0% |
! | AGAAAATTACTTAGTACCTT+TGG | + | chr5.2:60324855-60324874 | None:intergenic | 25.0% |
! | AGTTTCCAATCAAAACAAAA+TGG | + | chr5.2:60323494-60323513 | None:intergenic | 25.0% |
! | ATGATGATTAAGAATAAACG+TGG | - | chr5.2:60321200-60321219 | MS.gene53989:CDS | 25.0% |
! | ATTCAGACACATTAAACTAA+AGG | + | chr5.2:60321979-60321998 | None:intergenic | 25.0% |
! | ATTTGAGAAGATTATACCAT+TGG | - | chr5.2:60325697-60325716 | MS.gene53989:intron | 25.0% |
! | CATGGTTCAAATGATTTAAT+CGG | - | chr5.2:60323975-60323994 | MS.gene53989:intron | 25.0% |
! | CTAGAACAGATAAAATGTAT+TGG | - | chr5.2:60323372-60323391 | MS.gene53989:CDS | 25.0% |
! | GAATAGCATACAAAATAATC+TGG | + | chr5.2:60320822-60320841 | None:intergenic | 25.0% |
! | GTTTCCAATCAAAACAAAAT+GGG | + | chr5.2:60323493-60323512 | None:intergenic | 25.0% |
! | TAACCATGGTAACTTTATAT+TGG | - | chr5.2:60321482-60321501 | MS.gene53989:intron | 25.0% |
! | TAAGACGACATAATTTAACA+AGG | - | chr5.2:60325462-60325481 | MS.gene53989:intron | 25.0% |
! | TAGTTTAATGTGTCTGAATA+TGG | - | chr5.2:60321980-60321999 | MS.gene53989:CDS | 25.0% |
! | TGAAAAAAGACCTTTAATGT+CGG | - | chr5.2:60323776-60323795 | MS.gene53989:intron | 25.0% |
! | TGATGATTAAGAATAAACGT+GGG | - | chr5.2:60321201-60321220 | MS.gene53989:CDS | 25.0% |
! | TGTTAAATTATGTCGTCTTA+TGG | + | chr5.2:60325462-60325481 | None:intergenic | 25.0% |
! | TTAATGTCGGTCTTAATATT+TGG | - | chr5.2:60323789-60323808 | MS.gene53989:intron | 25.0% |
! | TTCGAATAAGTATTAGCATA+AGG | + | chr5.2:60321749-60321768 | None:intergenic | 25.0% |
!! | AATAAATCAACTTTTGCTTG+GGG | - | chr5.2:60324517-60324536 | MS.gene53989:intron | 25.0% |
!! | ACTATCTAAATCTTTTACCA+CGG | - | chr5.2:60320775-60320794 | MS.gene53989:intron | 25.0% |
!! | AGAGTGACTTTTAAATAAAG+TGG | + | chr5.2:60321407-60321426 | None:intergenic | 25.0% |
!! | CAATAAATCAACTTTTGCTT+GGG | - | chr5.2:60324516-60324535 | MS.gene53989:intron | 25.0% |
!! | CTTTTGTTACAATTGACTAA+CGG | + | chr5.2:60320610-60320629 | None:intergenic | 25.0% |
!! | GTTAAATTTTACATACCTCT+TGG | - | chr5.2:60323437-60323456 | MS.gene53989:intron | 25.0% |
!! | GTTTGTATTTGAACATGTTT+TGG | - | chr5.2:60322969-60322988 | MS.gene53989:intron | 25.0% |
!! | TATCTTTTCCTTTGTTCTAT+TGG | - | chr5.2:60322818-60322837 | MS.gene53989:intron | 25.0% |
!! | TCACTGATTGTTTATCAATT+AGG | - | chr5.2:60321577-60321596 | MS.gene53989:CDS | 25.0% |
!! | TTTAGCGAAAACAATAGTTT+TGG | - | chr5.2:60323312-60323331 | MS.gene53989:CDS | 25.0% |
!! | TTTCTGAACGAAACAATTTT+TGG | - | chr5.2:60323415-60323434 | MS.gene53989:intron | 25.0% |
!!! | ACAATAGTTTTGGTTTATGT+CGG | - | chr5.2:60323322-60323341 | MS.gene53989:CDS | 25.0% |
!!! | TATATGGCTTTATGTTATGT+AGG | - | chr5.2:60324148-60324167 | MS.gene53989:intron | 25.0% |
!!! | TGGTATTCTAATTTTGAGTA+GGG | - | chr5.2:60323809-60323828 | MS.gene53989:intron | 25.0% |
!!! | TGTTGATTCAATAATTCTAC+AGG | - | chr5.2:60324638-60324657 | MS.gene53989:intron | 25.0% |
!!! | TTGGTATTCTAATTTTGAGT+AGG | - | chr5.2:60323808-60323827 | MS.gene53989:intron | 25.0% |
AAATGTCTCGGTACATAATT+GGG | - | chr5.2:60323211-60323230 | MS.gene53989:intron | 30.0% | |
AAATGTTTCCGCAAAGTAAA+CGG | - | chr5.2:60324720-60324739 | MS.gene53989:intron | 30.0% | |
ACTGGAATATGAATTGTACT+TGG | - | chr5.2:60322464-60322483 | MS.gene53989:CDS | 30.0% | |
AGTGTTTCTTGTACAAATCT+TGG | - | chr5.2:60324689-60324708 | MS.gene53989:intron | 30.0% | |
ATGATCTCGTGATTAATTGA+TGG | - | chr5.2:60320670-60320689 | MS.gene53989:intron | 30.0% | |
ATGTCAATACTCTCTTTAAC+AGG | - | chr5.2:60321153-60321172 | MS.gene53989:CDS | 30.0% | |
CAAATATGACGATTGAAACA+AGG | + | chr5.2:60321250-60321269 | None:intergenic | 30.0% | |
CAAGACTTTGATAAGATAAG+TGG | - | chr5.2:60321533-60321552 | MS.gene53989:intron | 30.0% | |
CATGATTTCAAATGACACAT+TGG | - | chr5.2:60323518-60323537 | MS.gene53989:CDS | 30.0% | |
CATGTCTATGTGTATTTCAT+AGG | - | chr5.2:60322380-60322399 | MS.gene53989:intron | 30.0% | |
CCAATAATTCCATTTCAAAC+TGG | + | chr5.2:60321625-60321644 | None:intergenic | 30.0% | |
GAAATTGTAGAGTAAAGTGT+TGG | + | chr5.2:60325041-60325060 | None:intergenic | 30.0% | |
GATTTGTCTTCATTAAAGAG+AGG | + | chr5.2:60322151-60322170 | None:intergenic | 30.0% | |
GGTATGATTCATAAATGTCT+CGG | - | chr5.2:60323199-60323218 | MS.gene53989:intron | 30.0% | |
GTCCAGATAAAAAAAGATGA+AGG | - | chr5.2:60324771-60324790 | MS.gene53989:intron | 30.0% | |
TAAACAATCAGTGATCTGAT+TGG | + | chr5.2:60321571-60321590 | None:intergenic | 30.0% | |
TAAATGTCTCGGTACATAAT+TGG | - | chr5.2:60323210-60323229 | MS.gene53989:intron | 30.0% | |
TAAGTGCGTGTTTAGATTTA+CGG | - | chr5.2:60323247-60323266 | MS.gene53989:intron | 30.0% | |
TATGAATCATACCTTCTCAA+AGG | + | chr5.2:60323192-60323211 | None:intergenic | 30.0% | |
TATGTGTATTTCATAGGACA+TGG | - | chr5.2:60322386-60322405 | MS.gene53989:intron | 30.0% | |
TCAAGGAAGATTAAATCACT+TGG | - | chr5.2:60324260-60324279 | MS.gene53989:intron | 30.0% | |
TCACATCATAAGTTTCAACA+TGG | + | chr5.2:60324205-60324224 | None:intergenic | 30.0% | |
TCATAATTCTAATGACCTTG+CGG | + | chr5.2:60324388-60324407 | None:intergenic | 30.0% | |
TGGACTTTCTAATATCAATC+AGG | - | chr5.2:60320972-60320991 | MS.gene53989:CDS | 30.0% | |
TGTCAATACTCTCTTTAACA+GGG | - | chr5.2:60321154-60321173 | MS.gene53989:CDS | 30.0% | |
TGTTAATCTTGATTAGTACG+AGG | - | chr5.2:60322761-60322780 | MS.gene53989:intron | 30.0% | |
TTATGAAAACCAGAAAACCT+TGG | - | chr5.2:60325658-60325677 | MS.gene53989:intron | 30.0% | |
TTCCTTGACATAAGAAACAT+AGG | + | chr5.2:60324248-60324267 | None:intergenic | 30.0% | |
TTGACATATTGATACAACGT+TGG | - | chr5.2:60322279-60322298 | MS.gene53989:CDS | 30.0% | |
TTGTACAAATCTTGGAAAAC+AGG | - | chr5.2:60324697-60324716 | MS.gene53989:intron | 30.0% | |
TTTACTCTACAATTTCGTGA+TGG | - | chr5.2:60325045-60325064 | MS.gene53989:intron | 30.0% | |
! | ATCAATCGACTCTTCTTAAT+CGG | - | chr5.2:60325244-60325263 | MS.gene53989:intron | 30.0% |
! | CATTTTATATGAGCTGAGTT+TGG | + | chr5.2:60321901-60321920 | None:intergenic | 30.0% |
! | CCAAGCAAAAGTTGATTTAT+TGG | + | chr5.2:60324518-60324537 | None:intergenic | 30.0% |
! | CCAATAAATCAACTTTTGCT+TGG | - | chr5.2:60324515-60324534 | MS.gene53989:intron | 30.0% |
! | CCAGTTTGAAATGGAATTAT+TGG | - | chr5.2:60321622-60321641 | MS.gene53989:CDS | 30.0% |
! | CTATCTAAATCTTTTACCAC+GGG | - | chr5.2:60320776-60320795 | MS.gene53989:intron | 30.0% |
! | GAATATGGATTATGTCACTT+GGG | + | chr5.2:60321228-60321247 | None:intergenic | 30.0% |
! | GAATTGAGAAGTATATTCTG+AGG | - | chr5.2:60324796-60324815 | MS.gene53989:intron | 30.0% |
! | TACTCATACCATTTTGTTCT+CGG | + | chr5.2:60324605-60324624 | None:intergenic | 30.0% |
! | TTCGTTCACATTACTCTTTT+TGG | + | chr5.2:60320870-60320889 | None:intergenic | 30.0% |
! | TTTACACATGATGCTTTTGT+CGG | - | chr5.2:60320543-60320562 | MS.gene53989:CDS | 30.0% |
!! | GCATCGACATTTTATATTGA+AGG | - | chr5.2:60322232-60322251 | MS.gene53989:intron | 30.0% |
!! | GGTGTTTCTATTTTGCAAAT+TGG | - | chr5.2:60321065-60321084 | MS.gene53989:intron | 30.0% |
!! | TAAATCACTTGGTGTCAAAT+GGG | - | chr5.2:60324271-60324290 | MS.gene53989:intron | 30.0% |
!! | TTAAATCACTTGGTGTCAAA+TGG | - | chr5.2:60324270-60324289 | MS.gene53989:intron | 30.0% |
!! | TTGTGATGATCTTGTCATTT+TGG | - | chr5.2:60321177-60321196 | MS.gene53989:CDS | 30.0% |
!!! | GTCCTTCATCTTTTTTTATC+TGG | + | chr5.2:60324776-60324795 | None:intergenic | 30.0% |
!!! | TATGCCCATTTTGTTTTGAT+TGG | - | chr5.2:60323486-60323505 | MS.gene53989:intron | 30.0% |
AAAATGGGCATAAGTTGCTT+TGG | + | chr5.2:60323478-60323497 | None:intergenic | 35.0% | |
AAACTACACTCATTCTGTGT+TGG | - | chr5.2:60323685-60323704 | MS.gene53989:intron | 35.0% | |
AACAAATTCCTTGTTGAGAG+TGG | - | chr5.2:60321111-60321130 | MS.gene53989:intron | 35.0% | |
AAGCTAAAGAAACATCATGC+TGG | + | chr5.2:60322491-60322510 | None:intergenic | 35.0% | |
AATGTTTCCGCAAAGTAAAC+GGG | - | chr5.2:60324721-60324740 | MS.gene53989:intron | 35.0% | |
AATTACTTAGTACCTTTGGC+AGG | + | chr5.2:60324851-60324870 | None:intergenic | 35.0% | |
ACGAGTATCCAATAGAACAA+AGG | + | chr5.2:60322829-60322848 | None:intergenic | 35.0% | |
ACTACAGAATGATCTTTGAG+AGG | - | chr5.2:60325201-60325220 | MS.gene53989:intron | 35.0% | |
AGACAAATCTGTCATTGTCA+CGG | - | chr5.2:60322162-60322181 | MS.gene53989:intron | 35.0% | |
AGGATTCTCTTCATCATCAA+AGG | + | chr5.2:60324826-60324845 | None:intergenic | 35.0% | |
ATAAACTCCTTGTCCAAGAA+TGG | + | chr5.2:60324559-60324578 | None:intergenic | 35.0% | |
CACCTATGTTTCTTATGTCA+AGG | - | chr5.2:60324243-60324262 | MS.gene53989:intron | 35.0% | |
CATTTGTACTCTAGCAAAGA+TGG | - | chr5.2:60323083-60323102 | MS.gene53989:CDS | 35.0% | |
CTTGATTAGTACGAGGAATA+TGG | - | chr5.2:60322768-60322787 | MS.gene53989:intron | 35.0% | |
GAACAGTAAAGGTAAACTCA+TGG | + | chr5.2:60323889-60323908 | None:intergenic | 35.0% | |
GAAGGATCTGATGAGATATT+TGG | - | chr5.2:60324305-60324324 | MS.gene53989:intron | 35.0% | |
GACCCAATATAAAGTTACCA+TGG | + | chr5.2:60321488-60321507 | None:intergenic | 35.0% | |
GACGATTGAAACAAGGAATA+TGG | + | chr5.2:60321243-60321262 | None:intergenic | 35.0% | |
GTTGGTTATAGTTGGATTGA+TGG | - | chr5.2:60324981-60325000 | MS.gene53989:intron | 35.0% | |
TAACTTCCCTATACATTGGT+TGG | - | chr5.2:60322886-60322905 | MS.gene53989:intron | 35.0% | |
TAGAAACACCCAAAAAGTCA+CGG | + | chr5.2:60321055-60321074 | None:intergenic | 35.0% | |
TATCAATTAGGACCAACAAG+TGG | - | chr5.2:60321589-60321608 | MS.gene53989:CDS | 35.0% | |
TATTGATCCCGAGAACAAAA+TGG | - | chr5.2:60324594-60324613 | MS.gene53989:intron | 35.0% | |
TCGTGATAACAGTTACATAG+TGG | - | chr5.2:60322845-60322864 | MS.gene53989:intron | 35.0% | |
TGAGTTTACCTTTACTGTTC+AGG | - | chr5.2:60323889-60323908 | MS.gene53989:intron | 35.0% | |
TGATATTGACACGTAAACAC+CGG | + | chr5.2:60325398-60325417 | None:intergenic | 35.0% | |
TGTCAATATCAGGTCGTATT+TGG | - | chr5.2:60325407-60325426 | MS.gene53989:intron | 35.0% | |
TTGTGATGTTATTGCACACT+TGG | - | chr5.2:60322662-60322681 | MS.gene53989:intron | 35.0% | |
! | AACTTCCCTATACATTGGTT+GGG | - | chr5.2:60322887-60322906 | MS.gene53989:intron | 35.0% |
! | ACTCATACCATTTTGTTCTC+GGG | + | chr5.2:60324604-60324623 | None:intergenic | 35.0% |
! | ATATCCAACCGTGACTTTTT+GGG | - | chr5.2:60321044-60321063 | MS.gene53989:intron | 35.0% |
! | CTTCAGGTTAAAGGTGTATA+TGG | - | chr5.2:60325298-60325317 | MS.gene53989:intron | 35.0% |
! | GGAATATGGATTATGTCACT+TGG | + | chr5.2:60321229-60321248 | None:intergenic | 35.0% |
! | TATATCCAACCGTGACTTTT+TGG | - | chr5.2:60321043-60321062 | MS.gene53989:intron | 35.0% |
! | TCATGCAGCACATTTTATAC+AGG | - | chr5.2:60324934-60324953 | MS.gene53989:intron | 35.0% |
! | TGAGAAGTATATTCTGAGGA+AGG | - | chr5.2:60324800-60324819 | MS.gene53989:intron | 35.0% |
! | TTTTGTTGACCAAGGTTTTC+TGG | + | chr5.2:60325670-60325689 | None:intergenic | 35.0% |
!! | AAGTTGATTTATTGGCTCTC+TGG | + | chr5.2:60324510-60324529 | None:intergenic | 35.0% |
!! | TGCTTTGGAAATCCAAAGTT+CGG | + | chr5.2:60323463-60323482 | None:intergenic | 35.0% |
!! | TGGCTTTATGTTATGTAGGA+TGG | - | chr5.2:60324152-60324171 | MS.gene53989:intron | 35.0% |
!!! | AACATGTTTTGGAATGTGTC+TGG | - | chr5.2:60322980-60322999 | MS.gene53989:CDS | 35.0% |
!!! | TTCTACAGTTTTGTTGACCA+AGG | + | chr5.2:60325678-60325697 | None:intergenic | 35.0% |
AAAGAAGTTGCAGACTACCT+AGG | - | chr5.2:60323854-60323873 | MS.gene53989:intron | 40.0% | |
AAATCTGTCATTGTCACGGT+AGG | - | chr5.2:60322166-60322185 | MS.gene53989:intron | 40.0% | |
AAATGGGTAATCTCTGGTGA+AGG | - | chr5.2:60324287-60324306 | MS.gene53989:intron | 40.0% | |
AGCAGTTACCTGAACAGTAA+AGG | + | chr5.2:60323900-60323919 | None:intergenic | 40.0% | |
ATAGTGGCTAGAGATGCTAT+TGG | - | chr5.2:60322861-60322880 | MS.gene53989:intron | 40.0% | |
ATATGGTGTTTGACACGTGA+CGG | - | chr5.2:60325315-60325334 | MS.gene53989:intron | 40.0% | |
ATCATAAGGAGCTGATGGAA+TGG | + | chr5.2:60323150-60323169 | None:intergenic | 40.0% | |
CAATCCCCAACCAATGTATA+GGG | + | chr5.2:60322895-60322914 | None:intergenic | 40.0% | |
CAGAAGGAACAATTCAGTGA+TGG | - | chr5.2:60324957-60324976 | MS.gene53989:intron | 40.0% | |
CATCACAATCACTTCCAGTT+CGG | + | chr5.2:60322650-60322669 | None:intergenic | 40.0% | |
CATGAACATCAGATACGACA+AGG | + | chr5.2:60322364-60322383 | None:intergenic | 40.0% | |
CCAGATAGTAGAACACCAAA+AGG | + | chr5.2:60323586-60323605 | None:intergenic | 40.0% | |
CTCAAAGCTAGAGGATCATA+AGG | + | chr5.2:60323164-60323183 | None:intergenic | 40.0% | |
GATAGGATGATGCTTAATGC+TGG | - | chr5.2:60325134-60325153 | MS.gene53989:intron | 40.0% | |
GATTACAGGCAGTGATAAAG+AGG | - | chr5.2:60323545-60323564 | MS.gene53989:CDS | 40.0% | |
GCAGTGCTACAAAGCTTATA+TGG | + | chr5.2:60325276-60325295 | None:intergenic | 40.0% | |
GGAGTAACTTCCCTATACAT+TGG | - | chr5.2:60322882-60322901 | MS.gene53989:intron | 40.0% | |
GGATCTGATGAGATATTTGG+TGG | - | chr5.2:60324308-60324327 | MS.gene53989:intron | 40.0% | |
GGATGGTATAGATGCAATTG+AGG | - | chr5.2:60324169-60324188 | MS.gene53989:intron | 40.0% | |
GGGAGCTATGAACAATTCAA+AGG | - | chr5.2:60321658-60321677 | MS.gene53989:CDS | 40.0% | |
GGTGTTTACGTGTCAATATC+AGG | - | chr5.2:60325397-60325416 | MS.gene53989:intron | 40.0% | |
TAGAGTACAAATGACCAGGT+GGG | + | chr5.2:60323076-60323095 | None:intergenic | 40.0% | |
TCATTTGAACCATGACCTAG+AGG | + | chr5.2:60323969-60323988 | None:intergenic | 40.0% | |
TCTGTAGTAGTATGCTTCCT+TGG | + | chr5.2:60325189-60325208 | None:intergenic | 40.0% | |
TGATCCTACTAGAGCTAAGA+GGG | - | chr5.2:60320455-60320474 | MS.gene53989:CDS | 40.0% | |
TGGTGAAACTCTTCCTTGTT+TGG | + | chr5.2:60324356-60324375 | None:intergenic | 40.0% | |
TGTTCTACTATCTGGAGGTT+TGG | - | chr5.2:60323591-60323610 | MS.gene53989:intron | 40.0% | |
TTGCTAGAGTACAAATGACC+AGG | + | chr5.2:60323080-60323099 | None:intergenic | 40.0% | |
TTGTACTCTAGCAAAGATGG+TGG | - | chr5.2:60323086-60323105 | MS.gene53989:CDS | 40.0% | |
TTTACAACCATGAAGCTCTC+AGG | - | chr5.2:60322601-60322620 | MS.gene53989:CDS | 40.0% | |
! | ACTTCCCTATACATTGGTTG+GGG | - | chr5.2:60322888-60322907 | MS.gene53989:intron | 40.0% |
! | CTTTCACAAAGCACCAAACA+AGG | - | chr5.2:60324340-60324359 | MS.gene53989:intron | 40.0% |
! | GAACAATTCAGTGATGGTGT+TGG | - | chr5.2:60324963-60324982 | MS.gene53989:intron | 40.0% |
! | GACACATTGGTTGTGATTAC+AGG | - | chr5.2:60323531-60323550 | MS.gene53989:CDS | 40.0% |
! | GCACATTTTATACAGGCAGA+AGG | - | chr5.2:60324941-60324960 | MS.gene53989:intron | 40.0% |
! | GGTTCTTCACATTTTCCACT+AGG | - | chr5.2:60325106-60325125 | MS.gene53989:intron | 40.0% |
! | GTTTTGCAGCATGAGCTTTA+AGG | + | chr5.2:60325007-60325026 | None:intergenic | 40.0% |
! | TCTTTTCCAGCCTTAAGATC+AGG | + | chr5.2:60323839-60323858 | None:intergenic | 40.0% |
! | TGTTTTCAGAACCAGACTGT+CGG | + | chr5.2:60324051-60324070 | None:intergenic | 40.0% |
! | TTTGGAATGTGTCTGGATTC+AGG | - | chr5.2:60322987-60323006 | MS.gene53989:CDS | 40.0% |
! | TTTTCCACTAGGTGACTGAT+AGG | - | chr5.2:60325117-60325136 | MS.gene53989:intron | 40.0% |
!! | AAGATGGTGGATTTCGAAGA+TGG | - | chr5.2:60323099-60323118 | MS.gene53989:CDS | 40.0% |
!! | AGTATGCTTCCTTGGTGTTT+GGG | + | chr5.2:60325181-60325200 | None:intergenic | 40.0% |
!! | CGATTGATTAACTTGCCTGA+GGG | + | chr5.2:60325232-60325251 | None:intergenic | 40.0% |
!! | CTTATGATCCTCTAGCTTTG+AGG | - | chr5.2:60323162-60323181 | MS.gene53989:intron | 40.0% |
!! | GTGATGGTGTTGGTTATAGT+TGG | - | chr5.2:60324973-60324992 | MS.gene53989:intron | 40.0% |
!! | TAGTATGCTTCCTTGGTGTT+TGG | + | chr5.2:60325182-60325201 | None:intergenic | 40.0% |
!! | TCGATTGATTAACTTGCCTG+AGG | + | chr5.2:60325233-60325252 | None:intergenic | 40.0% |
!! | TTGATGACTGATGTGCCTTT+TGG | - | chr5.2:60323568-60323587 | MS.gene53989:CDS | 40.0% |
!! | TTGTTTTGCAGAACTCAGCA+AGG | - | chr5.2:60325513-60325532 | MS.gene53989:intron | 40.0% |
!! | TTTGGTGTTCTACTATCTGG+AGG | - | chr5.2:60323586-60323605 | MS.gene53989:intron | 40.0% |
!!! | CCTTTTGGTGTTCTACTATC+TGG | - | chr5.2:60323583-60323602 | MS.gene53989:intron | 40.0% |
AAAAGCAGTCACCATGTTGG+TGG | + | chr5.2:60322081-60322100 | None:intergenic | 45.0% | |
AAATCCAAAGTTCGGCCAAG+AGG | + | chr5.2:60323455-60323474 | None:intergenic | 45.0% | |
AACACCCAAAAAGTCACGGT+TGG | + | chr5.2:60321051-60321070 | None:intergenic | 45.0% | |
ACCAATCACACATTCCGAAC+TGG | - | chr5.2:60322633-60322652 | MS.gene53989:intron | 45.0% | |
ACCTGAAGGATCAAGGTTCT+TGG | + | chr5.2:60325609-60325628 | None:intergenic | 45.0% | |
ACTCATGGTGAACAGTTCCT+AGG | + | chr5.2:60323874-60323893 | None:intergenic | 45.0% | |
AGAAGCCAGAGTTCCATTCT+TGG | - | chr5.2:60324543-60324562 | MS.gene53989:intron | 45.0% | |
AGAGAATCCTTACCTGCCAA+AGG | - | chr5.2:60324836-60324855 | MS.gene53989:intron | 45.0% | |
AGAGGATCATAAGGAGCTGA+TGG | + | chr5.2:60323155-60323174 | None:intergenic | 45.0% | |
AGGACCAACAAGTGGTATGT+GGG | - | chr5.2:60321597-60321616 | MS.gene53989:CDS | 45.0% | |
AGGTGTGCTTGCTCTAATTG+TGG | + | chr5.2:60324228-60324247 | None:intergenic | 45.0% | |
ATCAAGCCGATGAAACCTCT+AGG | - | chr5.2:60323951-60323970 | MS.gene53989:intron | 45.0% | |
ATGTGGGGTCCAGTTTGAAA+TGG | - | chr5.2:60321613-60321632 | MS.gene53989:CDS | 45.0% | |
ATTGGAAGCTTCTCCTGTTG+AGG | - | chr5.2:60325715-60325734 | MS.gene53989:CDS | 45.0% | |
CAAAACAGCCACTCTCAACA+AGG | + | chr5.2:60321122-60321141 | None:intergenic | 45.0% | |
CACAGCAAAAGCTGTTGAGT+GGG | - | chr5.2:60325571-60325590 | MS.gene53989:intron | 45.0% | |
CAGAGTTCCATTCTTGGACA+AGG | - | chr5.2:60324549-60324568 | MS.gene53989:intron | 45.0% | |
CATAGTTGATCCTGCTTCTG+GGG | - | chr5.2:60322120-60322139 | MS.gene53989:intron | 45.0% | |
CCAAAAAGCAGTCACCATGT+TGG | + | chr5.2:60322084-60322103 | None:intergenic | 45.0% | |
CCAATCCCCAACCAATGTAT+AGG | + | chr5.2:60322896-60322915 | None:intergenic | 45.0% | |
CCATAGTTGATCCTGCTTCT+GGG | - | chr5.2:60322119-60322138 | MS.gene53989:intron | 45.0% | |
CCATGACCTAGAGGTTTCAT+CGG | + | chr5.2:60323960-60323979 | None:intergenic | 45.0% | |
CGAAGACTTTGTGGACAAGT+TGG | - | chr5.2:60322791-60322810 | MS.gene53989:intron | 45.0% | |
CTAGAGTACAAATGACCAGG+TGG | + | chr5.2:60323077-60323096 | None:intergenic | 45.0% | |
CTCATTCTGTGTTGGACTTG+AGG | - | chr5.2:60323693-60323712 | MS.gene53989:intron | 45.0% | |
CTGATCCTACTAGAGCTAAG+AGG | - | chr5.2:60320454-60320473 | MS.gene53989:CDS | 45.0% | |
CTGGTCGAAGCCACTATAAT+TGG | + | chr5.2:60320803-60320822 | None:intergenic | 45.0% | |
CTTAGTACCTTTGGCAGGTA+AGG | + | chr5.2:60324846-60324865 | None:intergenic | 45.0% | |
CTTGTCCAAGAATGGAACTC+TGG | + | chr5.2:60324551-60324570 | None:intergenic | 45.0% | |
GAAGATGGTACAATCCTCCT+TGG | - | chr5.2:60323114-60323133 | MS.gene53989:CDS | 45.0% | |
GATCAACTATGGCTAACCGT+TGG | + | chr5.2:60322111-60322130 | None:intergenic | 45.0% | |
GGAATATGGCGAAGACTTTG+TGG | - | chr5.2:60322782-60322801 | MS.gene53989:intron | 45.0% | |
GGTGTCAAATGGGTAATCTC+TGG | - | chr5.2:60324281-60324300 | MS.gene53989:intron | 45.0% | |
GTTAGTGCCCGTTTACTTTG+CGG | + | chr5.2:60324731-60324750 | None:intergenic | 45.0% | |
TAAACGGGCACTAACTAAGC+TGG | - | chr5.2:60324736-60324755 | MS.gene53989:intron | 45.0% | |
TACCACGGGACCAATTATAG+TGG | - | chr5.2:60320790-60320809 | MS.gene53989:intron | 45.0% | |
TAGGACCAACAAGTGGTATG+TGG | - | chr5.2:60321596-60321615 | MS.gene53989:CDS | 45.0% | |
TCAACAGGAGAAGCTTCCAA+TGG | + | chr5.2:60325716-60325735 | None:intergenic | 45.0% | |
TCATCCTATCAGTCACCTAG+TGG | + | chr5.2:60325124-60325143 | None:intergenic | 45.0% | |
TCCAAGAACCTTGATCCTTC+AGG | - | chr5.2:60325605-60325624 | MS.gene53989:intron | 45.0% | |
TCCAGTTCGGAATGTGTGAT+TGG | + | chr5.2:60322637-60322656 | None:intergenic | 45.0% | |
TGGAGGTTTGGACTCATCAT+TGG | - | chr5.2:60323603-60323622 | MS.gene53989:intron | 45.0% | |
TGGCTCTCTGGCAATCATAT+TGG | + | chr5.2:60324498-60324517 | None:intergenic | 45.0% | |
! | AGACTGTCGGTTGGTTCAAT+CGG | + | chr5.2:60324038-60324057 | None:intergenic | 45.0% |
! | CCTATACATTGGTTGGGGAT+TGG | - | chr5.2:60322893-60322912 | MS.gene53989:intron | 45.0% |
! | CTTGTTGAGAGTGGCTGTTT+TGG | - | chr5.2:60321120-60321139 | MS.gene53989:intron | 45.0% |
! | CTTTGTAGCACTGCTACTTC+AGG | - | chr5.2:60325282-60325301 | MS.gene53989:intron | 45.0% |
! | GACTTTGTGGACAAGTTGGA+TGG | - | chr5.2:60322795-60322814 | MS.gene53989:intron | 45.0% |
! | GCACTGCTACTTCAGGTTAA+AGG | - | chr5.2:60325289-60325308 | MS.gene53989:intron | 45.0% |
! | GTCTGGATTCAGGTTCTGTT+TGG | - | chr5.2:60322997-60323016 | MS.gene53989:CDS | 45.0% |
! | TACATTGGTTGGGGATTGGA+TGG | - | chr5.2:60322897-60322916 | MS.gene53989:intron | 45.0% |
! | TTTGAGGCATGCCTTTGAGA+AGG | - | chr5.2:60323178-60323197 | MS.gene53989:intron | 45.0% |
!! | CATTTTGAGTGTTTCCCACC+TGG | - | chr5.2:60323059-60323078 | MS.gene53989:CDS | 45.0% |
!! | CCAACATGGTGACTGCTTTT+TGG | - | chr5.2:60322081-60322100 | MS.gene53989:intron | 45.0% |
!! | GTATGCTTCCTTGGTGTTTG+GGG | + | chr5.2:60325180-60325199 | None:intergenic | 45.0% |
!! | TCATCGGCTTGATCTCTAGT+CGG | + | chr5.2:60323944-60323963 | None:intergenic | 45.0% |
!! | TGTGGTATACTTGCTGTGCT+TGG | - | chr5.2:60320426-60320445 | MS.gene53989:CDS | 45.0% |
!!! | ACTGCTTTTTGGCACACCAA+CGG | - | chr5.2:60322092-60322111 | MS.gene53989:intron | 45.0% |
!! | ATTAAATATATTAGATAATA+TGG | - | chr5.2:60321013-60321032 | MS.gene53989:CDS | 5.0% |
AAGGCATGCCTCAAAGCTAG+AGG | + | chr5.2:60323173-60323192 | None:intergenic | 50.0% | |
ACCAAAGCTGCTGAGCAATG+GGG | - | chr5.2:60323658-60323677 | MS.gene53989:intron | 50.0% | |
AGCCACTATAATTGGTCCCG+TGG | + | chr5.2:60320795-60320814 | None:intergenic | 50.0% | |
CAATCCTCCTTGGTACTCTG+AGG | - | chr5.2:60323124-60323143 | MS.gene53989:CDS | 50.0% | |
CACCAAAGCTGCTGAGCAAT+GGG | - | chr5.2:60323657-60323676 | MS.gene53989:intron | 50.0% | |
CATACCTCTTGGCCGAACTT+TGG | - | chr5.2:60323448-60323467 | MS.gene53989:intron | 50.0% | |
CCCAGAAGCAGGATCAACTA+TGG | + | chr5.2:60322122-60322141 | None:intergenic | 50.0% | |
CCGATGAAACCTCTAGGTCA+TGG | - | chr5.2:60323957-60323976 | MS.gene53989:intron | 50.0% | |
CTCTGAATGGCAACCTCAAC+AGG | + | chr5.2:60325731-60325750 | None:intergenic | 50.0% | |
CTGCTCTACCTGAAGGATCA+AGG | + | chr5.2:60325616-60325635 | None:intergenic | 50.0% | |
CTGTTGAGTGGGATGCTTCT+TGG | - | chr5.2:60325582-60325601 | MS.gene53989:intron | 50.0% | |
GATTGAACCAACCGACAGTC+TGG | - | chr5.2:60324037-60324056 | MS.gene53989:CDS | 50.0% | |
GCACAGCAAAAGCTGTTGAG+TGG | - | chr5.2:60325570-60325589 | MS.gene53989:intron | 50.0% | |
GCCATAGTTGATCCTGCTTC+TGG | - | chr5.2:60322118-60322137 | MS.gene53989:intron | 50.0% | |
GGACCAACAAGTGGTATGTG+GGG | - | chr5.2:60321598-60321617 | MS.gene53989:CDS | 50.0% | |
TCACCAAGAAACATGCCGCA+AGG | - | chr5.2:60324370-60324389 | MS.gene53989:intron | 50.0% | |
TCAGCAAGGCTAACTGTTCC+TGG | - | chr5.2:60325527-60325546 | MS.gene53989:intron | 50.0% | |
TGACCTTGCGGCATGTTTCT+TGG | + | chr5.2:60324376-60324395 | None:intergenic | 50.0% | |
TGTTTGACACGTGACGGTGT+TGG | - | chr5.2:60325321-60325340 | MS.gene53989:intron | 50.0% | |
TTCAGAACCAGACTGTCGGT+TGG | + | chr5.2:60324047-60324066 | None:intergenic | 50.0% | |
! | CTTTGAGAGGTTCTTCCCTC+AGG | - | chr5.2:60325214-60325233 | MS.gene53989:intron | 50.0% |
!! | CGAACCCTCTTAGCTCTAGT+AGG | + | chr5.2:60320462-60320481 | None:intergenic | 50.0% |
!! | CGTAACAGATTGAAGCACCG+TGG | - | chr5.2:60322037-60322056 | MS.gene53989:intron | 50.0% |
!! | CTTGGTGTTTGGGGTGTTGT+GGG | + | chr5.2:60325171-60325190 | None:intergenic | 50.0% |
!! | TTGGTGTTTGGGGTGTTGTG+GGG | + | chr5.2:60325170-60325189 | None:intergenic | 50.0% |
ATTGCCTGCGTGAAAGCTCG+AGG | + | chr5.2:60320488-60320507 | None:intergenic | 55.0% | |
CATGCAACAGTTGGTCCTCC+AGG | + | chr5.2:60325548-60325567 | None:intergenic | 55.0% | |
CCACAACACCCCAAACACCA+AGG | - | chr5.2:60325169-60325188 | MS.gene53989:intron | 55.0% | |
CCACCAAAGCTGCTGAGCAA+TGG | - | chr5.2:60323656-60323675 | MS.gene53989:intron | 55.0% | |
CCTTCAGGTAGAGCAGCACT+TGG | - | chr5.2:60325620-60325639 | MS.gene53989:intron | 55.0% | |
GCAAGGCTAACTGTTCCTGG+AGG | - | chr5.2:60325530-60325549 | MS.gene53989:intron | 55.0% | |
GCTGCTTCCTGAGAGCTTCA+TGG | + | chr5.2:60322611-60322630 | None:intergenic | 55.0% | |
GCTGTGCTGCATGCAACAGT+TGG | + | chr5.2:60325557-60325576 | None:intergenic | 55.0% | |
GGACCCCACATACCACTTGT+TGG | + | chr5.2:60321604-60321623 | None:intergenic | 55.0% | |
GTAGGGCTCGCCTGATCTTA+AGG | - | chr5.2:60323826-60323845 | MS.gene53989:intron | 55.0% | |
TCCCCATTGCTCAGCAGCTT+TGG | + | chr5.2:60323662-60323681 | None:intergenic | 55.0% | |
! | AGAGGTTGATCCCCAGAAGC+AGG | + | chr5.2:60322133-60322152 | None:intergenic | 55.0% |
! | ATGGCCTCAGAGTACCAAGG+AGG | + | chr5.2:60323131-60323150 | None:intergenic | 55.0% |
! | CAGCAGCTTTGGTGGTTGCT+AGG | + | chr5.2:60323651-60323670 | None:intergenic | 55.0% |
! | CCAAGTGCTGCTCTACCTGA+AGG | + | chr5.2:60325623-60325642 | None:intergenic | 55.0% |
! | CCATTGCTCAGCAGCTTTGG+TGG | + | chr5.2:60323659-60323678 | None:intergenic | 55.0% |
! | GGAATGGCCTCAGAGTACCA+AGG | + | chr5.2:60323134-60323153 | None:intergenic | 55.0% |
!! | CCTTGGTGTTTGGGGTGTTG+TGG | + | chr5.2:60325172-60325191 | None:intergenic | 55.0% |
!! | TGGTGTTTGGGGTGTTGTGG+GGG | + | chr5.2:60325169-60325188 | None:intergenic | 55.0% |
GGCTCGCCTGATCTTAAGGC+TGG | - | chr5.2:60323830-60323849 | MS.gene53989:intron | 60.0% | |
GTGTCCTCGAGCTTTCACGC+AGG | - | chr5.2:60320481-60320500 | MS.gene53989:CDS | 60.0% | |
! | TGGAGTGGGCTCCACCAACA+TGG | - | chr5.2:60322067-60322086 | MS.gene53989:intron | 60.0% |
ACCGTGGCCCTGACTGGAGT+GGG | - | chr5.2:60322053-60322072 | MS.gene53989:intron | 65.0% | |
GGTGGAGCCCACTCCAGTCA+GGG | + | chr5.2:60322063-60322082 | None:intergenic | 65.0% | |
TGGTGGAGCCCACTCCAGTC+AGG | + | chr5.2:60322064-60322083 | None:intergenic | 65.0% | |
!! | TGAAGCACCGTGGCCCTGAC+TGG | - | chr5.2:60322047-60322066 | MS.gene53989:intron | 65.0% |
CACCGTGGCCCTGACTGGAG+TGG | - | chr5.2:60322052-60322071 | MS.gene53989:intron | 70.0% | |
GCCCACTCCAGTCAGGGCCA+CGG | + | chr5.2:60322057-60322076 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 60320423 | 60325754 | 60320423 | ID=MS.gene53989 |
chr5.2 | mRNA | 60320423 | 60325754 | 60320423 | ID=MS.gene53989.t1;Parent=MS.gene53989 |
chr5.2 | exon | 60325701 | 60325754 | 60325701 | ID=MS.gene53989.t1.exon1;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60325701 | 60325754 | 60325701 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60323994 | 60324125 | 60323994 | ID=MS.gene53989.t1.exon2;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60323994 | 60324125 | 60323994 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60323494 | 60323589 | 60323494 | ID=MS.gene53989.t1.exon3;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60323494 | 60323589 | 60323494 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60323259 | 60323400 | 60323259 | ID=MS.gene53989.t1.exon4;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60323259 | 60323400 | 60323259 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60322978 | 60323168 | 60322978 | ID=MS.gene53989.t1.exon5;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60322978 | 60323168 | 60322978 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60322463 | 60322624 | 60322463 | ID=MS.gene53989.t1.exon6;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60322463 | 60322624 | 60322463 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60322267 | 60322347 | 60322267 | ID=MS.gene53989.t1.exon7;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60322267 | 60322347 | 60322267 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60321786 | 60322007 | 60321786 | ID=MS.gene53989.t1.exon8;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60321786 | 60322007 | 60321786 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60321562 | 60321696 | 60321562 | ID=MS.gene53989.t1.exon9;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60321562 | 60321696 | 60321562 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60321320 | 60321400 | 60321320 | ID=MS.gene53989.t1.exon10;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60321320 | 60321400 | 60321320 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60321149 | 60321235 | 60321149 | ID=MS.gene53989.t1.exon11;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60321149 | 60321235 | 60321149 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60320942 | 60321049 | 60320942 | ID=MS.gene53989.t1.exon12;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60320942 | 60321049 | 60320942 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
chr5.2 | exon | 60320423 | 60320653 | 60320423 | ID=MS.gene53989.t1.exon13;Parent=MS.gene53989.t1 |
chr5.2 | CDS | 60320423 | 60320653 | 60320423 | ID=cds.MS.gene53989.t1;Parent=MS.gene53989.t1 |
Gene Sequence |
Protein sequence |