Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57014.t1 | XP_003615711.1 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.00E+00 | 1184.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57014.t1 | P19252 | 93.0 | 583 | 29 | 2 | 1 | 572 | 1 | 582 | 0.0e+00 | 1129.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57014.t1 | G7JZK0 | 97.8 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0e+00 | 1184.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57014 | MS.gene75475 | PPI |
| MS.gene57014 | MS.gene30955 | PPI |
| MS.gene021114 | MS.gene57014 | PPI |
| MS.gene57014 | MS.gene31156 | PPI |
| MS.gene57014 | MS.gene045117 | PPI |
| MS.gene79217 | MS.gene57014 | PPI |
| MS.gene57014 | MS.gene052122 | PPI |
| MS.gene57014 | MS.gene41176 | PPI |
| MS.gene57014 | MS.gene004045 | PPI |
| MS.gene57014 | MS.gene052207 | PPI |
| MS.gene57014 | MS.gene45489 | PPI |
| MS.gene57014 | MS.gene071169 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57014.t1 | MTR_5g071360 | 97.774 | 584 | 2 | 1 | 1 | 573 | 1 | 584 | 0.0 | 1187 |
| MS.gene57014.t1 | MTR_5g071360 | 97.451 | 510 | 2 | 1 | 1 | 499 | 1 | 510 | 0.0 | 1038 |
| MS.gene57014.t1 | MTR_3g464580 | 84.812 | 586 | 76 | 3 | 1 | 573 | 1 | 586 | 0.0 | 1034 |
| MS.gene57014.t1 | MTR_3g464580 | 86.051 | 509 | 59 | 2 | 1 | 497 | 1 | 509 | 0.0 | 920 |
| MS.gene57014.t1 | MTR_3g087220 | 76.799 | 556 | 118 | 1 | 1 | 545 | 1 | 556 | 0.0 | 914 |
| MS.gene57014.t1 | MTR_3g464580 | 85.491 | 448 | 52 | 3 | 1 | 436 | 1 | 447 | 0.0 | 799 |
| MS.gene57014.t1 | MTR_5g069310 | 93.662 | 142 | 9 | 0 | 432 | 573 | 2 | 143 | 6.24e-93 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57014.t1 | AT3G47340 | 81.913 | 575 | 86 | 2 | 1 | 564 | 1 | 568 | 0.0 | 995 |
| MS.gene57014.t1 | AT5G10240 | 77.719 | 570 | 116 | 1 | 1 | 559 | 1 | 570 | 0.0 | 947 |
| MS.gene57014.t1 | AT5G10240 | 77.193 | 570 | 118 | 2 | 1 | 559 | 1 | 569 | 0.0 | 937 |
| MS.gene57014.t1 | AT5G65010 | 78.545 | 550 | 107 | 1 | 1 | 539 | 1 | 550 | 0.0 | 932 |
| MS.gene57014.t1 | AT5G65010 | 78.584 | 551 | 106 | 2 | 1 | 539 | 1 | 551 | 0.0 | 929 |
| MS.gene57014.t1 | AT3G47340 | 83.858 | 508 | 71 | 1 | 1 | 497 | 1 | 508 | 0.0 | 909 |
| MS.gene57014.t1 | AT3G47340 | 83.453 | 417 | 58 | 1 | 1 | 406 | 1 | 417 | 0.0 | 744 |
| MS.gene57014.t1 | AT3G47340 | 87.043 | 301 | 39 | 0 | 106 | 406 | 2 | 302 | 0.0 | 562 |
Find 144 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGCAAAAGTTGATTTAT+TGG | 0.146655 | 5.1:+55168063 | None:intergenic |
| GCCATAGTTGATCCTGCTTC+TGG | 0.190792 | 5.1:-55170297 | MS.gene57014:CDS |
| TAGTATGCTTCCTTGGTGTT+TGG | 0.294339 | 5.1:+55167398 | None:intergenic |
| CTTGGTGTTTGGGGTGTTGT+GGG | 0.299374 | 5.1:+55167409 | None:intergenic |
| AGTATGCTTCCTTGGTGTTT+GGG | 0.315403 | 5.1:+55167399 | None:intergenic |
| TGGTGAAACTCTTCCTTGTT+TGG | 0.317778 | 5.1:+55168225 | None:intergenic |
| CTTGATTAGTACGAGGAATA+TGG | 0.320124 | 5.1:-55169649 | MS.gene57014:intron |
| CCAATCCCCAACCAATGTAT+AGG | 0.322005 | 5.1:+55169524 | None:intergenic |
| CTGTTGAGTGGGATGCTTCT+TGG | 0.325762 | 5.1:-55166995 | MS.gene57014:CDS |
| CCTTGGTGTTTGGGGTGTTG+TGG | 0.329281 | 5.1:+55167408 | None:intergenic |
| AGAAGCCAGAGTTCCATTCT+TGG | 0.330224 | 5.1:-55168035 | MS.gene57014:CDS |
| TGGCTCTCTGGCAATCATAT+TGG | 0.332558 | 5.1:+55168083 | None:intergenic |
| CCATTGTTCAGCAGCTTTAG+TGG | 0.336373 | 5.1:+55168922 | None:intergenic |
| TGAGTTTACCTTTACTGTTC+AGG | 0.336514 | 5.1:-55168688 | MS.gene57014:intron |
| GAAGGATCTGATGAGATATT+TGG | 0.338455 | 5.1:-55168273 | MS.gene57014:CDS |
| CCTATACATTGGTTGGGGAT+TGG | 0.339541 | 5.1:-55169524 | MS.gene57014:CDS |
| CACTAAAGCTGCTGAACAAT+GGG | 0.342197 | 5.1:-55168921 | MS.gene57014:CDS |
| GCTGCTTCCTGAGAGCTTCA+TGG | 0.346516 | 5.1:+55169810 | None:intergenic |
| GTTGGTTATAGTTGGATTGA+TGG | 0.352635 | 5.1:-55167597 | MS.gene57014:CDS |
| CTCTGAATGGCAACCTCAAC+AGG | 0.354874 | 5.1:+55166849 | None:intergenic |
| TGACCTTGCGGCATGTTTCT+TGG | 0.358607 | 5.1:+55168205 | None:intergenic |
| ACCTGAAGGATCAAGGTTCT+TGG | 0.360091 | 5.1:+55166971 | None:intergenic |
| TCGGCAAGGCTAACTGTTCC+TGG | 0.360471 | 5.1:-55167050 | MS.gene57014:CDS |
| CCATAGTTGATCCTGCTTCT+GGG | 0.367703 | 5.1:-55170296 | MS.gene57014:CDS |
| CTTATGATCCTCTAGCTTTG+AGG | 0.378272 | 5.1:-55169255 | MS.gene57014:CDS |
| TCCAAGAACCTTGATCCTTC+AGG | 0.384997 | 5.1:-55166972 | MS.gene57014:CDS |
| TGGTGGAGCCCACTCCAGTC+AGG | 0.386539 | 5.1:+55170354 | None:intergenic |
| TGGAGGATTGGATTCATCAT+TGG | 0.387012 | 5.1:-55168975 | MS.gene57014:CDS |
| GTCTGGATTCAGGTTCTGTT+TGG | 0.394150 | 5.1:-55169420 | MS.gene57014:intron |
| CTTTGAGAGGTTCTTCCCTC+AGG | 0.394486 | 5.1:-55167363 | MS.gene57014:intron |
| AACTTCCCTATACATTGGTT+GGG | 0.395146 | 5.1:-55169530 | MS.gene57014:CDS |
| TTAAATCACTTGGTGTCAAA+TGG | 0.396039 | 5.1:-55168308 | MS.gene57014:CDS |
| TATTGATCCCGAGAACAAAA+TGG | 0.398992 | 5.1:-55167984 | MS.gene57014:intron |
| CTTAGTACCTTTGGCAGGTA+AGG | 0.415335 | 5.1:+55167735 | None:intergenic |
| AAGTTGATTTATTGGCTCTC+TGG | 0.421158 | 5.1:+55168071 | None:intergenic |
| GTGATGGTGTTGGTTATAGT+TGG | 0.421617 | 5.1:-55167605 | MS.gene57014:CDS |
| TCTGTAGTAGTATGCTTCCT+TGG | 0.425516 | 5.1:+55167391 | None:intergenic |
| CAATCCCCAACCAATGTATA+GGG | 0.426353 | 5.1:+55169525 | None:intergenic |
| TGAAGCACCGTGGCCCTGAC+TGG | 0.426940 | 5.1:-55170368 | MS.gene57014:intron |
| CCTTTCGGTGTTCTACTCTC+TGG | 0.430264 | 5.1:-55168995 | MS.gene57014:CDS |
| CCCAGAAGCAGGATCAACTA+TGG | 0.430437 | 5.1:+55170296 | None:intergenic |
| ATAAACTCCTTGTCCAAGAA+TGG | 0.445681 | 5.1:+55168022 | None:intergenic |
| ATAGGGCTCACCTGATCTTA+AGG | 0.455924 | 5.1:-55168751 | MS.gene57014:intron |
| CAGCAGCTTTAGTGGTTGCT+AGG | 0.459719 | 5.1:+55168930 | None:intergenic |
| TGTTCTACTCTCTGGAGGAT+TGG | 0.460012 | 5.1:-55168987 | MS.gene57014:CDS |
| TGTGGTATACTTGCTGTGCT+TGG | 0.469074 | 5.1:-55172000 | MS.gene57014:CDS |
| CATGCAACAGTTGGTCCTCC+AGG | 0.472328 | 5.1:+55167032 | None:intergenic |
| TAACTTCCCTATACATTGGT+TGG | 0.473236 | 5.1:-55169531 | MS.gene57014:CDS |
| ATTTGAGAAGATTATACCAT+TGG | 0.476016 | 5.1:-55166880 | MS.gene57014:CDS |
| TAAATCACTTGGTGTCAAAT+GGG | 0.481025 | 5.1:-55168307 | MS.gene57014:CDS |
| ATTGGAAGCTTCTCCTGTTG+AGG | 0.481461 | 5.1:-55166862 | MS.gene57014:CDS |
| TTGATGACTGATGTGCCTTT+CGG | 0.482997 | 5.1:-55169010 | MS.gene57014:CDS |
| CGCAGTTACCTGAACAGTAA+AGG | 0.486211 | 5.1:+55168680 | None:intergenic |
| CTCAAAGCTAGAGGATCATA+AGG | 0.487494 | 5.1:+55169256 | None:intergenic |
| CTCATTCTGTGTTGGCCTTG+AGG | 0.489628 | 5.1:-55168885 | MS.gene57014:intron |
| GGCTCACCTGATCTTAAGGC+TGG | 0.495494 | 5.1:-55168747 | MS.gene57014:CDS |
| AATTACTTAGTACCTTTGGC+AGG | 0.501660 | 5.1:+55167730 | None:intergenic |
| CTGATCCTACTAGAGCTAAG+AGG | 0.503237 | 5.1:-55171972 | MS.gene57014:CDS |
| TCTAACCACACATTCCGAAC+TGG | 0.503914 | 5.1:-55169785 | MS.gene57014:CDS |
| TTTACAACCATGAAGCTCTC+AGG | 0.505927 | 5.1:-55169817 | MS.gene57014:CDS |
| CACCGTGGCCCTGACTGGAG+TGG | 0.507750 | 5.1:-55170363 | MS.gene57014:CDS |
| ACCGTGGCCCTGACTGGAGT+GGG | 0.511159 | 5.1:-55170362 | MS.gene57014:CDS |
| GGAATATGGAGAAGACTTTG+TGG | 0.514584 | 5.1:-55169635 | MS.gene57014:CDS |
| CATCACAATCACTTCCAGTT+CGG | 0.516313 | 5.1:+55169771 | None:intergenic |
| CATAGTTGATCCTGCTTCTG+GGG | 0.518463 | 5.1:-55170295 | MS.gene57014:CDS |
| CACCTATGTTTCTTATGTCA+AGG | 0.519137 | 5.1:-55168335 | MS.gene57014:CDS |
| AGAGGTTGATCCCCAGAAGC+AGG | 0.522206 | 5.1:+55170285 | None:intergenic |
| TGGTGTTTGGGGTGTTGTGG+GGG | 0.523651 | 5.1:+55167411 | None:intergenic |
| CTGCTCTACCTGAAGGATCA+AGG | 0.523757 | 5.1:+55166964 | None:intergenic |
| AGAGGATCATAAGGAGCTGA+TGG | 0.524528 | 5.1:+55169265 | None:intergenic |
| GATTACAGGCAGTGATAAAG+AGG | 0.524836 | 5.1:-55169033 | MS.gene57014:intron |
| GGTGGAGCCCACTCCAGTCA+GGG | 0.525107 | 5.1:+55170355 | None:intergenic |
| TACATTGGTTGGGGATTGGA+TGG | 0.526541 | 5.1:-55169520 | MS.gene57014:intron |
| CCACTAAAGCTGCTGAACAA+TGG | 0.526602 | 5.1:-55168922 | MS.gene57014:CDS |
| GAAGATGGTACAATCCTCCT+TGG | 0.526713 | 5.1:-55169303 | MS.gene57014:CDS |
| CATTTGTACTCTAGCAAAGA+TGG | 0.527462 | 5.1:-55169334 | MS.gene57014:CDS |
| CACTTCCAGTTCGGAATGTG+TGG | 0.528154 | 5.1:+55169780 | None:intergenic |
| CGAACCCTCTTAGCTCTAGT+AGG | 0.529513 | 5.1:+55171967 | None:intergenic |
| AAAGAAGTTGCAGATTACCT+TGG | 0.530767 | 5.1:-55168723 | MS.gene57014:CDS |
| TTCGGTGTTCTACTCTCTGG+AGG | 0.533116 | 5.1:-55168992 | MS.gene57014:CDS |
| ACTTCCCTATACATTGGTTG+GGG | 0.533129 | 5.1:-55169529 | MS.gene57014:CDS |
| CTTGTCCAAGAATGGAACTC+TGG | 0.535205 | 5.1:+55168030 | None:intergenic |
| TTGTGATGTTATTGCACACT+TGG | 0.539309 | 5.1:-55169756 | MS.gene57014:intron |
| AAGCTACACTCATTCTGTGT+TGG | 0.540329 | 5.1:-55168893 | MS.gene57014:CDS |
| GCCCACTCCAGTCAGGGCCA+CGG | 0.540446 | 5.1:+55170361 | None:intergenic |
| AAGATGGTGGATTTAGAAGA+TGG | 0.540992 | 5.1:-55169318 | MS.gene57014:CDS |
| AAAAGCAGTCACCATGTTGG+TGG | 0.543353 | 5.1:+55170337 | None:intergenic |
| CAGCTCAAACTAGCTCTGAA+TGG | 0.544212 | 5.1:+55166836 | None:intergenic |
| CAGAGTTCCATTCTTGGACA+AGG | 0.551331 | 5.1:-55168029 | MS.gene57014:CDS |
| TTGGTGTTTGGGGTGTTGTG+GGG | 0.552196 | 5.1:+55167410 | None:intergenic |
| TGCTAGGTAGCGAGCAGTGA+TGG | 0.552201 | 5.1:+55168946 | None:intergenic |
| CACAGCAAAAGCTGTTGAGT+GGG | 0.555110 | 5.1:-55167006 | MS.gene57014:CDS |
| GCTGTGCTGCATGCAACAGT+TGG | 0.559213 | 5.1:+55167023 | None:intergenic |
| AGAAGACTTTGTGGACAAGT+TGG | 0.566916 | 5.1:-55169626 | MS.gene57014:CDS |
| GACTTTGTGGACAAGTTGGA+TGG | 0.567732 | 5.1:-55169622 | MS.gene57014:CDS |
| TTCCTTGACATAAGAAACAT+AGG | 0.569230 | 5.1:+55168333 | None:intergenic |
| AGGATTCTCTTCATCATCAA+AGG | 0.569332 | 5.1:+55167755 | None:intergenic |
| TTTGAGGCATGCCTTTGAGA+AGG | 0.570418 | 5.1:-55169239 | MS.gene57014:intron |
| GGTGTCAAATGGGTAATCTC+TGG | 0.572109 | 5.1:-55168297 | MS.gene57014:CDS |
| GAACAATTCAGTGATGGTGT+TGG | 0.577943 | 5.1:-55167615 | MS.gene57014:CDS |
| GTATGCTTCCTTGGTGTTTG+GGG | 0.580346 | 5.1:+55167400 | None:intergenic |
| TATGAATCATACCTTCTCAA+AGG | 0.580405 | 5.1:+55169228 | None:intergenic |
| ATAGTGGCTAGAGATGCTAT+AGG | 0.581258 | 5.1:-55169556 | MS.gene57014:CDS |
| GGAGTAACTTCCCTATACAT+TGG | 0.585952 | 5.1:-55169535 | MS.gene57014:CDS |
| CTTTCACAAAGCACCAAACA+AGG | 0.587961 | 5.1:-55168238 | MS.gene57014:CDS |
| GATAGGATGATGCTTAATGC+TGG | 0.589317 | 5.1:-55167443 | MS.gene57014:CDS |
| TGATCCTACTAGAGCTAAGA+GGG | 0.590868 | 5.1:-55171971 | MS.gene57014:intron |
| AAATGGGTAATCTCTGGTGA+AGG | 0.594753 | 5.1:-55168291 | MS.gene57014:CDS |
| GCACAGCAAAAGCTGTTGAG+TGG | 0.598571 | 5.1:-55167007 | MS.gene57014:CDS |
| GGATGGTATAGATGCAATTG+AGG | 0.599373 | 5.1:-55168409 | MS.gene57014:CDS |
| TGAGAAGTATATTCTGAGGA+AGG | 0.602559 | 5.1:-55167778 | MS.gene57014:CDS |
| CCTTCAGGTAGAGCAGCACT+TGG | 0.604084 | 5.1:-55166957 | MS.gene57014:CDS |
| GAACAGTAAAGGTAAACTCA+TGG | 0.604362 | 5.1:+55168691 | None:intergenic |
| TCGTGACAACAGTTACATAG+TGG | 0.611665 | 5.1:-55169572 | MS.gene57014:CDS |
| ACTACAGAATGATCTTTGAG+AGG | 0.611737 | 5.1:-55167376 | MS.gene57014:CDS |
| TCAAGGAAGATTAAATCACT+TGG | 0.611830 | 5.1:-55168318 | MS.gene57014:CDS |
| GGATCTGATGAGATATTTGG+TGG | 0.613587 | 5.1:-55168270 | MS.gene57014:CDS |
| TAAACATTTACTACAATGTG+TGG | 0.615423 | 5.1:-55172018 | None:intergenic |
| TTATGAAAACCAGAAAACCT+TGG | 0.617746 | 5.1:-55166919 | MS.gene57014:CDS |
| CAGAAGGAACAATTCAGTGA+TGG | 0.617988 | 5.1:-55167621 | MS.gene57014:CDS |
| TTGTACTCTAGCAAAGATGG+TGG | 0.620516 | 5.1:-55169331 | MS.gene57014:CDS |
| CCACAACACCCCAAACACCA+AGG | 0.622582 | 5.1:-55167408 | MS.gene57014:CDS |
| ACTCATGGTGAACAGTTCCA+AGG | 0.623420 | 5.1:+55168706 | None:intergenic |
| TTGCTAGAGTACAAATGACC+AGG | 0.627197 | 5.1:+55169340 | None:intergenic |
| CCAAGTGCTGCTCTACCTGA+AGG | 0.631267 | 5.1:+55166957 | None:intergenic |
| AGAGAATCCTTACCTGCCAA+AGG | 0.637793 | 5.1:-55167742 | MS.gene57014:intron |
| AAGGCATGCCTCAAAGCTAG+AGG | 0.643083 | 5.1:+55169247 | None:intergenic |
| ACGAGTATCCAATAGAACAA+AGG | 0.647672 | 5.1:+55169591 | None:intergenic |
| GATCAACTATGGCTAACCGT+TGG | 0.653817 | 5.1:+55170307 | None:intergenic |
| AGACAAATCTGTCATTGTCA+CGG | 0.657965 | 5.1:-55170253 | MS.gene57014:intron |
| CAATCCTCCTTGGTACTCTG+AGG | 0.659380 | 5.1:-55169293 | MS.gene57014:CDS |
| TCACCAAGAAACATGCCGCA+AGG | 0.661739 | 5.1:-55168208 | MS.gene57014:intron |
| GAATTGAGAAGTATATTCTG+AGG | 0.663370 | 5.1:-55167782 | MS.gene57014:CDS |
| CCAGAGAGTAGAACACCGAA+AGG | 0.666814 | 5.1:+55168995 | None:intergenic |
| CTAGAGTACAAATGACCAGG+TGG | 0.679392 | 5.1:+55169343 | None:intergenic |
| TCAACAGGAGAAGCTTCCAA+TGG | 0.679614 | 5.1:+55166864 | None:intergenic |
| TAGAGTACAAATGACCAGGT+GGG | 0.692112 | 5.1:+55169344 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.697527 | 5.1:-55170348 | MS.gene57014:CDS |
| GGAATAGCCTCAGAGTACCA+AGG | 0.698225 | 5.1:+55169286 | None:intergenic |
| TCACATCATATGTTTCAACA+TGG | 0.707488 | 5.1:+55168376 | None:intergenic |
| ACTAAAGCTGCTGAACAATG+GGG | 0.720021 | 5.1:-55168920 | MS.gene57014:CDS |
| GCAAGGCTAACTGTTCCTGG+AGG | 0.749278 | 5.1:-55167047 | MS.gene57014:CDS |
| CGTAACAGATTGAAGCACCG+TGG | 0.776414 | 5.1:-55170378 | MS.gene57014:intron |
| ATAGCCTCAGAGTACCAAGG+AGG | 0.789643 | 5.1:+55169289 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTTATAAAAAAATATG+TGG | - | chr5.1:55168355-55168374 | MS.gene57014:CDS | 10.0% |
| !!! | ATAAATTTGTTTTCTTAATA+CGG | - | chr5.1:55167150-55167169 | MS.gene57014:intron | 10.0% |
| !!! | ATTTTTTGATAAACTAATAT+TGG | - | chr5.1:55168238-55168257 | MS.gene57014:CDS | 10.0% |
| !! | AATATAATCATATATGTCAA+TGG | + | chr5.1:55171618-55171637 | None:intergenic | 15.0% |
| !! | AATCCATAAATTAAAGTATA+AGG | + | chr5.1:55169374-55169393 | None:intergenic | 15.0% |
| !! | GTTATGAAATCAATAATATA+TGG | - | chr5.1:55170402-55170421 | MS.gene57014:intron | 15.0% |
| !! | TGAAATTAAGAATACTAAAT+AGG | + | chr5.1:55166942-55166961 | None:intergenic | 15.0% |
| !! | TTACATAATCATTATTGTTA+TGG | + | chr5.1:55168970-55168989 | None:intergenic | 15.0% |
| !! | TTTAGTATATGTCATATAAA+TGG | + | chr5.1:55168625-55168644 | None:intergenic | 15.0% |
| !!! | AAAAACAACTATTTAGTTTT+CGG | + | chr5.1:55170939-55170958 | None:intergenic | 15.0% |
| !!! | AAGTTTATGTTACTTATAAT+TGG | - | chr5.1:55171356-55171375 | MS.gene57014:intron | 15.0% |
| !!! | CTATTTTCTTAAATTATTAC+CGG | - | chr5.1:55171647-55171666 | MS.gene57014:intron | 15.0% |
| !!! | TTAATTAGTTTAATTAACCA+TGG | - | chr5.1:55167889-55167908 | MS.gene57014:intron | 15.0% |
| !!! | TTACCTTATACTTTAATTTA+TGG | - | chr5.1:55169368-55169387 | MS.gene57014:CDS | 15.0% |
| !! | AAAACTTTGATAAGATAAGT+GGG | - | chr5.1:55167956-55167975 | MS.gene57014:intron | 20.0% |
| !! | AATCTAACCAATAATTGTTT+AGG | + | chr5.1:55169776-55169795 | None:intergenic | 20.0% |
| !! | TAGTTAAAAACTTCAATCAT+TGG | + | chr5.1:55167744-55167763 | None:intergenic | 20.0% |
| !! | TTATTGAAAAATCAGGTAAA+TGG | - | chr5.1:55169003-55169022 | MS.gene57014:CDS | 20.0% |
| !! | TTCATGCAATTATATTCATA+TGG | - | chr5.1:55168848-55168867 | MS.gene57014:intron | 20.0% |
| !! | TTGAACAACAAAAGATTAAA+AGG | - | chr5.1:55168114-55168133 | MS.gene57014:intron | 20.0% |
| !! | TTTGTTTAATCTAACTTGAT+GGG | + | chr5.1:55167939-55167958 | None:intergenic | 20.0% |
| !!! | ACTCATCTTATAAAGATTTT+TGG | - | chr5.1:55168280-55168299 | MS.gene57014:CDS | 20.0% |
| !!! | ATAAAGATTTTTTACACTGT+TGG | - | chr5.1:55167013-55167032 | MS.gene57014:CDS | 20.0% |
| !!! | ATTATTGGTAAATTTTGTAG+TGG | - | chr5.1:55168059-55168078 | MS.gene57014:CDS | 20.0% |
| !!! | ATTTACTTAGCTTTTCATTA+TGG | - | chr5.1:55167373-55167392 | MS.gene57014:CDS | 20.0% |
| !!! | CATAAATTAATTTTGATGCA+CGG | + | chr5.1:55167130-55167149 | None:intergenic | 20.0% |
| !!! | CTATTTTTAATATGCAAAAC+TGG | - | chr5.1:55168879-55168898 | MS.gene57014:intron | 20.0% |
| !!! | CTTTGAACTAATAATTTGTT+TGG | - | chr5.1:55169123-55169142 | MS.gene57014:intron | 20.0% |
| !!! | TATATGGTTTTATGTTATGT+AGG | - | chr5.1:55170418-55170437 | MS.gene57014:intron | 20.0% |
| !!! | TTATTGGTAAATTTTGTAGT+GGG | - | chr5.1:55168060-55168079 | MS.gene57014:CDS | 20.0% |
| !!! | TTTTGTTTAATCTAACTTGA+TGG | + | chr5.1:55167940-55167959 | None:intergenic | 20.0% |
| ! | AAATGTCTCAGTACATAATT+GGG | - | chr5.1:55169642-55169661 | MS.gene57014:CDS | 25.0% |
| ! | AAATTGTAGAGTTAAAAGGT+TGG | + | chr5.1:55171311-55171330 | None:intergenic | 25.0% |
| ! | AACCATGGTAACTTTATAAT+TGG | - | chr5.1:55167904-55167923 | MS.gene57014:intron | 25.0% |
| ! | AAGACGACATAATTTAACAA+GGG | - | chr5.1:55171734-55171753 | MS.gene57014:intron | 25.0% |
| ! | ACCATGGTAACTTTATAATT+GGG | - | chr5.1:55167905-55167924 | MS.gene57014:intron | 25.0% |
| ! | AGATATTAAGACAACATTGA+AGG | + | chr5.1:55170061-55170080 | None:intergenic | 25.0% |
| ! | ATGATGATTAAGAATAAACG+TGG | - | chr5.1:55167621-55167640 | MS.gene57014:CDS | 25.0% |
| ! | ATTCAGACACATTAAACTAA+AGG | + | chr5.1:55168412-55168431 | None:intergenic | 25.0% |
| ! | ATTTGAGAAGATTATACCAT+TGG | - | chr5.1:55171968-55171987 | MS.gene57014:intron | 25.0% |
| ! | CAAAACTTTGATAAGATAAG+TGG | - | chr5.1:55167955-55167974 | MS.gene57014:intron | 25.0% |
| ! | CTAGAACAGATAAAATGTAT+TGG | - | chr5.1:55169723-55169742 | MS.gene57014:intron | 25.0% |
| ! | GATTTGTCTTCATTAAAAAG+AGG | + | chr5.1:55168584-55168603 | None:intergenic | 25.0% |
| ! | TAAATGTCTCAGTACATAAT+TGG | - | chr5.1:55169641-55169660 | MS.gene57014:CDS | 25.0% |
| ! | TAAGACGACATAATTTAACA+AGG | - | chr5.1:55171733-55171752 | MS.gene57014:intron | 25.0% |
| ! | TAGTTTAATGTGTCTGAATA+TGG | - | chr5.1:55168413-55168432 | MS.gene57014:intron | 25.0% |
| ! | TGATGATTAAGAATAAACGT+GGG | - | chr5.1:55167622-55167641 | MS.gene57014:CDS | 25.0% |
| ! | TGTTAAATTATGTCGTCTTA+TGG | + | chr5.1:55171733-55171752 | None:intergenic | 25.0% |
| ! | TTCGAATAAGTATTAGCATA+AGG | + | chr5.1:55168172-55168191 | None:intergenic | 25.0% |
| ! | TTGTCTTCTAATTTCGAATA+GGG | - | chr5.1:55170080-55170099 | MS.gene57014:intron | 25.0% |
| ! | TTTCTGACCTAAACAATTAT+TGG | - | chr5.1:55169766-55169785 | MS.gene57014:CDS | 25.0% |
| !! | AATAAATCAACTTTTGCTTG+GGG | - | chr5.1:55170787-55170806 | MS.gene57014:intron | 25.0% |
| !! | ACTATCTAAATCTTTTACCA+CGG | - | chr5.1:55167196-55167215 | MS.gene57014:intron | 25.0% |
| !! | AGAGTGACTTTTAAATAAAG+TGG | + | chr5.1:55167828-55167847 | None:intergenic | 25.0% |
| !! | CAATAAATCAACTTTTGCTT+GGG | - | chr5.1:55170786-55170805 | MS.gene57014:intron | 25.0% |
| !! | GTTTGTATTTGAACATGTTT+TGG | - | chr5.1:55169400-55169419 | MS.gene57014:CDS | 25.0% |
| !! | TATCTTTTCCTTTGTTCTAT+TGG | - | chr5.1:55169249-55169268 | MS.gene57014:CDS | 25.0% |
| !! | TCACTGATTGTTTATCAATT+AGG | - | chr5.1:55167999-55168018 | MS.gene57014:CDS | 25.0% |
| !! | TGTGTCATTATTGAAAAATC+AGG | - | chr5.1:55168996-55169015 | MS.gene57014:CDS | 25.0% |
| !! | TTTACACATGATACTTTTGT+CGG | - | chr5.1:55166965-55166984 | MS.gene57014:CDS | 25.0% |
| !!! | ACTTTTTAAGCTTACAGTTA+GGG | - | chr5.1:55170356-55170375 | MS.gene57014:CDS | 25.0% |
| !!! | CATTTTATATGAGTTGAGTT+TGG | + | chr5.1:55168336-55168355 | None:intergenic | 25.0% |
| !!! | TACTTTTTAAGCTTACAGTT+AGG | - | chr5.1:55170355-55170374 | MS.gene57014:CDS | 25.0% |
| !!! | TGTTGATTCAATAATTCTAC+AGG | - | chr5.1:55170908-55170927 | MS.gene57014:intron | 25.0% |
| !!! | TTTAATTGTTTTGCAGAACT+CGG | - | chr5.1:55171779-55171798 | MS.gene57014:intron | 25.0% |
| AAATGTTTCCGCAAAGTAAA+CGG | - | chr5.1:55170990-55171009 | MS.gene57014:intron | 30.0% | |
| ACCCAATTATAAAGTTACCA+TGG | + | chr5.1:55167909-55167928 | None:intergenic | 30.0% | |
| AGCAAATTACTTAGTACCTT+TGG | + | chr5.1:55171125-55171144 | None:intergenic | 30.0% | |
| AGTGTTTCTTGTACAAATCT+TGG | - | chr5.1:55170959-55170978 | MS.gene57014:intron | 30.0% | |
| ATGATCTTGGGATTAATTGA+TGG | - | chr5.1:55167091-55167110 | MS.gene57014:intron | 30.0% | |
| CAAATATGACGATTGAAACA+AGG | + | chr5.1:55167671-55167690 | None:intergenic | 30.0% | |
| CACGAAATTGTAGAGTTAAA+AGG | + | chr5.1:55171315-55171334 | None:intergenic | 30.0% | |
| CATGGTTCATCTGATTTAAT+CGG | - | chr5.1:55170246-55170265 | MS.gene57014:intron | 30.0% | |
| CCAATAATTCCATTTCAAAC+TGG | + | chr5.1:55168047-55168066 | None:intergenic | 30.0% | |
| CTTGTCTTCTAATTTCGAAT+AGG | - | chr5.1:55170079-55170098 | MS.gene57014:intron | 30.0% | |
| GAATAAATATATGCACCTCA+AGG | + | chr5.1:55169981-55170000 | None:intergenic | 30.0% | |
| GAATAGCATACAAAATAGTC+TGG | + | chr5.1:55167243-55167262 | None:intergenic | 30.0% | |
| GGATTGAAAACATTAGTGTT+TGG | - | chr5.1:55169663-55169682 | MS.gene57014:intron | 30.0% | |
| GTCCAGATAAAAAAAGATGA+AGG | - | chr5.1:55171041-55171060 | MS.gene57014:intron | 30.0% | |
| TAAACAATCAGTGATCTGAT+TGG | + | chr5.1:55167993-55168012 | None:intergenic | 30.0% | |
| TATCTATCAAGCATCAATAC+TGG | + | chr5.1:55168704-55168723 | None:intergenic | 30.0% | |
| TATGAATCATACCTTCTCAA+AGG | + | chr5.1:55169623-55169642 | None:intergenic | 30.0% | |
| TATGTGTGTTTCATAGGATA+TGG | - | chr5.1:55168819-55168838 | MS.gene57014:intron | 30.0% | |
| TCAAGGAAGATTAAATCACT+TGG | - | chr5.1:55170530-55170549 | MS.gene57014:intron | 30.0% | |
| TCACATCATATGTTTCAACA+TGG | + | chr5.1:55170475-55170494 | None:intergenic | 30.0% | |
| TCATAATTCTAATGACCTTG+CGG | + | chr5.1:55170658-55170677 | None:intergenic | 30.0% | |
| TCTGATTTAATCGGTTGAAT+TGG | - | chr5.1:55170255-55170274 | MS.gene57014:CDS | 30.0% | |
| TGGACTTTCTAATATCAATC+AGG | - | chr5.1:55167393-55167412 | MS.gene57014:CDS | 30.0% | |
| TGTTAATCTTGATTAGTACG+AGG | - | chr5.1:55169192-55169211 | MS.gene57014:intron | 30.0% | |
| TTAACTCTACAATTTCGTGA+TGG | - | chr5.1:55171316-55171335 | MS.gene57014:intron | 30.0% | |
| TTATGAAAACCAGAAAACCT+TGG | - | chr5.1:55171929-55171948 | MS.gene57014:intron | 30.0% | |
| TTCCTTGACATAAGAAACAT+AGG | + | chr5.1:55170518-55170537 | None:intergenic | 30.0% | |
| TTGTACAAATCTTGGAAAAC+AGG | - | chr5.1:55170967-55170986 | MS.gene57014:intron | 30.0% | |
| ! | ATCAATCGACTCTTCTTAAT+CGG | - | chr5.1:55171515-55171534 | MS.gene57014:intron | 30.0% |
| ! | CATTAGTGTTTGGTTTATGT+CGG | - | chr5.1:55169673-55169692 | MS.gene57014:intron | 30.0% |
| ! | CCAAGCAAAAGTTGATTTAT+TGG | + | chr5.1:55170788-55170807 | None:intergenic | 30.0% |
| ! | CCAATAAATCAACTTTTGCT+TGG | - | chr5.1:55170785-55170804 | MS.gene57014:intron | 30.0% |
| ! | CCAGTTTGAAATGGAATTAT+TGG | - | chr5.1:55168044-55168063 | MS.gene57014:CDS | 30.0% |
| ! | CTATCTAAATCTTTTACCAC+GGG | - | chr5.1:55167197-55167216 | MS.gene57014:intron | 30.0% |
| ! | GAATATGGATTATGTCACTT+GGG | + | chr5.1:55167649-55167668 | None:intergenic | 30.0% |
| ! | GAATTGAGAAGTATATTCTG+AGG | - | chr5.1:55171066-55171085 | MS.gene57014:intron | 30.0% |
| ! | GTTAGATTTTACTTACCTCT+TGG | - | chr5.1:55169788-55169807 | MS.gene57014:CDS | 30.0% |
| ! | TACTCATACCATTTTGTTCT+CGG | + | chr5.1:55170875-55170894 | None:intergenic | 30.0% |
| ! | TTCGTTCACATTACTCTTTT+TGG | + | chr5.1:55167291-55167310 | None:intergenic | 30.0% |
| !! | GGTGTTTCTATTTTGCAAAT+TGG | - | chr5.1:55167486-55167505 | MS.gene57014:intron | 30.0% |
| !! | TAAATCACTTGGTGTCAAAT+GGG | - | chr5.1:55170541-55170560 | MS.gene57014:intron | 30.0% |
| !! | TTAAATCACTTGGTGTCAAA+TGG | - | chr5.1:55170540-55170559 | MS.gene57014:intron | 30.0% |
| !!! | GTCCTTCATCTTTTTTTATC+TGG | + | chr5.1:55171046-55171065 | None:intergenic | 30.0% |
| !!! | TGGTTTTATGTTATGTAGGA+TGG | - | chr5.1:55170422-55170441 | MS.gene57014:intron | 30.0% |
| AAAGAAGTTGCAGATTACCT+TGG | - | chr5.1:55170125-55170144 | MS.gene57014:intron | 35.0% | |
| AACAAATTCCTTGTTGAGAG+TGG | - | chr5.1:55167532-55167551 | MS.gene57014:intron | 35.0% | |
| AATCATGCACACAATGATCT+TGG | - | chr5.1:55167078-55167097 | MS.gene57014:intron | 35.0% | |
| AATGTTTCCGCAAAGTAAAC+GGG | - | chr5.1:55170991-55171010 | MS.gene57014:intron | 35.0% | |
| AATTACTTAGTACCTTTGGC+AGG | + | chr5.1:55171121-55171140 | None:intergenic | 35.0% | |
| ACGAGTATCCAATAGAACAA+AGG | + | chr5.1:55169260-55169279 | None:intergenic | 35.0% | |
| ACTACAGAATGATCTTTGAG+AGG | - | chr5.1:55171472-55171491 | MS.gene57014:intron | 35.0% | |
| AGACAAATCTGTCATTGTCA+CGG | - | chr5.1:55168595-55168614 | MS.gene57014:intron | 35.0% | |
| AGGATTCTCTTCATCATCAA+AGG | + | chr5.1:55171096-55171115 | None:intergenic | 35.0% | |
| ATAAACTCCTTGTCCAAGAA+TGG | + | chr5.1:55170829-55170848 | None:intergenic | 35.0% | |
| ATCATGCACACAATGATCTT+GGG | - | chr5.1:55167079-55167098 | MS.gene57014:intron | 35.0% | |
| CAATGCTGTAGCATATATTG+CGG | + | chr5.1:55168307-55168326 | None:intergenic | 35.0% | |
| CACCTATGTTTCTTATGTCA+AGG | - | chr5.1:55170513-55170532 | MS.gene57014:intron | 35.0% | |
| CATGTCTATGTGTGTTTCAT+AGG | - | chr5.1:55168813-55168832 | MS.gene57014:intron | 35.0% | |
| CATTTGTACTCTAGCAAAGA+TGG | - | chr5.1:55169514-55169533 | MS.gene57014:intron | 35.0% | |
| CTTGATTAGTACGAGGAATA+TGG | - | chr5.1:55169199-55169218 | MS.gene57014:intron | 35.0% | |
| GAACAGTAAAGGTAAACTCA+TGG | + | chr5.1:55170160-55170179 | None:intergenic | 35.0% | |
| GAAGGATCTGATGAGATATT+TGG | - | chr5.1:55170575-55170594 | MS.gene57014:intron | 35.0% | |
| GACGATTGAAACAAGGAATA+TGG | + | chr5.1:55167664-55167683 | None:intergenic | 35.0% | |
| GTTGGTTATAGTTGGATTGA+TGG | - | chr5.1:55171251-55171270 | MS.gene57014:intron | 35.0% | |
| TAACTTCCCTATACATTGGT+TGG | - | chr5.1:55169317-55169336 | MS.gene57014:CDS | 35.0% | |
| TAGAAACACCCAAAAAGTCA+CGG | + | chr5.1:55167476-55167495 | None:intergenic | 35.0% | |
| TATCAATTAGGACCAACAAG+TGG | - | chr5.1:55168011-55168030 | MS.gene57014:CDS | 35.0% | |
| TATCACTGATGTTTACGTGT+CGG | - | chr5.1:55168768-55168787 | MS.gene57014:intron | 35.0% | |
| TATTGATCCCGAGAACAAAA+TGG | - | chr5.1:55170864-55170883 | MS.gene57014:intron | 35.0% | |
| TGAGTTTACCTTTACTGTTC+AGG | - | chr5.1:55170160-55170179 | MS.gene57014:intron | 35.0% | |
| TGATATTGACACGTAAACAC+CGG | + | chr5.1:55171669-55171688 | None:intergenic | 35.0% | |
| TGTCAATATCAGGTCGTATT+TGG | - | chr5.1:55171678-55171697 | MS.gene57014:intron | 35.0% | |
| TTGCTCCTTTGAATTGTTCA+TGG | + | chr5.1:55168088-55168107 | None:intergenic | 35.0% | |
| TTGTGATGTTATTGCACACT+TGG | - | chr5.1:55169092-55169111 | MS.gene57014:intron | 35.0% | |
| ! | AACTTCCCTATACATTGGTT+GGG | - | chr5.1:55169318-55169337 | MS.gene57014:CDS | 35.0% |
| ! | ACTCATACCATTTTGTTCTC+GGG | + | chr5.1:55170874-55170893 | None:intergenic | 35.0% |
| ! | ATATCCAACCGTGACTTTTT+GGG | - | chr5.1:55167465-55167484 | MS.gene57014:intron | 35.0% |
| ! | ATGGCAATACTCTCTTTTAC+AGG | - | chr5.1:55167574-55167593 | MS.gene57014:CDS | 35.0% |
| ! | CTTCAGCTTAAAGGTGTATA+TGG | - | chr5.1:55171569-55171588 | MS.gene57014:intron | 35.0% |
| ! | GGAATATGGATTATGTCACT+TGG | + | chr5.1:55167650-55167669 | None:intergenic | 35.0% |
| ! | TATATCCAACCGTGACTTTT+TGG | - | chr5.1:55167464-55167483 | MS.gene57014:intron | 35.0% |
| ! | TCATGCAGCACATTTTATAC+AGG | - | chr5.1:55171204-55171223 | MS.gene57014:intron | 35.0% |
| ! | TGAGAAGTATATTCTGAGGA+AGG | - | chr5.1:55171070-55171089 | MS.gene57014:intron | 35.0% |
| ! | TGGCAATACTCTCTTTTACA+GGG | - | chr5.1:55167575-55167594 | MS.gene57014:CDS | 35.0% |
| ! | TTAATCTAACTTGATGGGCA+TGG | + | chr5.1:55167934-55167953 | None:intergenic | 35.0% |
| ! | TTTTGTTGACCAAGGTTTTC+TGG | + | chr5.1:55171941-55171960 | None:intergenic | 35.0% |
| !! | AAGATGGTGGATTTAGAAGA+TGG | - | chr5.1:55169530-55169549 | MS.gene57014:CDS | 35.0% |
| !! | AAGTTGATTTATTGGCTCTC+TGG | + | chr5.1:55170780-55170799 | None:intergenic | 35.0% |
| !! | TTGTGATGATCTTGTCGTTT+TGG | - | chr5.1:55167598-55167617 | MS.gene57014:CDS | 35.0% |
| !!! | AACATGTTTTGGAATGTGTC+TGG | - | chr5.1:55169411-55169430 | MS.gene57014:CDS | 35.0% |
| !!! | TTCTACAGTTTTGTTGACCA+AGG | + | chr5.1:55171949-55171968 | None:intergenic | 35.0% |
| AAATCTGTCATTGTCACGGT+AGG | - | chr5.1:55168599-55168618 | MS.gene57014:intron | 40.0% | |
| AAATGGGTAATCTCTGGTGA+AGG | - | chr5.1:55170557-55170576 | MS.gene57014:intron | 40.0% | |
| AAGCTACACTCATTCTGTGT+TGG | - | chr5.1:55169955-55169974 | MS.gene57014:intron | 40.0% | |
| ACTAAAGCTGCTGAACAATG+GGG | - | chr5.1:55169928-55169947 | MS.gene57014:intron | 40.0% | |
| AGAAGACTTTGTGGACAAGT+TGG | - | chr5.1:55169222-55169241 | MS.gene57014:intron | 40.0% | |
| ATAGTGGCTAGAGATGCTAT+AGG | - | chr5.1:55169292-55169311 | MS.gene57014:CDS | 40.0% | |
| ATATGGTGTTTGACACGTGA+CGG | - | chr5.1:55171586-55171605 | MS.gene57014:intron | 40.0% | |
| ATCAAACCGATGAAACCTCT+AGG | - | chr5.1:55170222-55170241 | MS.gene57014:intron | 40.0% | |
| CAATCCCCAACCAATGTATA+GGG | + | chr5.1:55169326-55169345 | None:intergenic | 40.0% | |
| CACTAAAGCTGCTGAACAAT+GGG | - | chr5.1:55169927-55169946 | MS.gene57014:intron | 40.0% | |
| CAGAAGGAACAATTCAGTGA+TGG | - | chr5.1:55171227-55171246 | MS.gene57014:intron | 40.0% | |
| CATCACAATCACTTCCAGTT+CGG | + | chr5.1:55169080-55169099 | None:intergenic | 40.0% | |
| CTCAAAGCTAGAGGATCATA+AGG | + | chr5.1:55169595-55169614 | None:intergenic | 40.0% | |
| GATAGGATGATGCTTAATGC+TGG | - | chr5.1:55171405-55171424 | MS.gene57014:intron | 40.0% | |
| GATTACAGGCAGTGATAAAG+AGG | - | chr5.1:55169815-55169834 | MS.gene57014:CDS | 40.0% | |
| GCAGTGCTACAAAGCTTATA+TGG | + | chr5.1:55171547-55171566 | None:intergenic | 40.0% | |
| GGAATATGGAGAAGACTTTG+TGG | - | chr5.1:55169213-55169232 | MS.gene57014:intron | 40.0% | |
| GGAGTAACTTCCCTATACAT+TGG | - | chr5.1:55169313-55169332 | MS.gene57014:CDS | 40.0% | |
| GGATCTGATGAGATATTTGG+TGG | - | chr5.1:55170578-55170597 | MS.gene57014:intron | 40.0% | |
| GGATGGTATAGATGCAATTG+AGG | - | chr5.1:55170439-55170458 | MS.gene57014:intron | 40.0% | |
| GGGAACCATGAACAATTCAA+AGG | - | chr5.1:55168080-55168099 | MS.gene57014:CDS | 40.0% | |
| GGTGTTTACGTGTCAATATC+AGG | - | chr5.1:55171668-55171687 | MS.gene57014:intron | 40.0% | |
| TACCTCTTGGTTGTGATTAC+AGG | - | chr5.1:55169801-55169820 | MS.gene57014:CDS | 40.0% | |
| TAGAGTACAAATGACCAGGT+GGG | + | chr5.1:55169507-55169526 | None:intergenic | 40.0% | |
| TCGTGACAACAGTTACATAG+TGG | - | chr5.1:55169276-55169295 | MS.gene57014:CDS | 40.0% | |
| TCTGTAGTAGTATGCTTCCT+TGG | + | chr5.1:55171460-55171479 | None:intergenic | 40.0% | |
| TGATCCTACTAGAGCTAAGA+GGG | - | chr5.1:55166877-55166896 | MS.gene57014:CDS | 40.0% | |
| TGGAGGATTGGATTCATCAT+TGG | - | chr5.1:55169873-55169892 | MS.gene57014:intron | 40.0% | |
| TGGTGAAACTCTTCCTTGTT+TGG | + | chr5.1:55170626-55170645 | None:intergenic | 40.0% | |
| TTGCTAGAGTACAAATGACC+AGG | + | chr5.1:55169511-55169530 | None:intergenic | 40.0% | |
| TTGTACTCTAGCAAAGATGG+TGG | - | chr5.1:55169517-55169536 | MS.gene57014:intron | 40.0% | |
| TTTACAACCATGAAGCTCTC+AGG | - | chr5.1:55169031-55169050 | MS.gene57014:intron | 40.0% | |
| ! | ACTTCCCTATACATTGGTTG+GGG | - | chr5.1:55169319-55169338 | MS.gene57014:CDS | 40.0% |
| ! | CTTTCACAAAGCACCAAACA+AGG | - | chr5.1:55170610-55170629 | MS.gene57014:intron | 40.0% |
| ! | GAACAATTCAGTGATGGTGT+TGG | - | chr5.1:55171233-55171252 | MS.gene57014:intron | 40.0% |
| ! | GCACATTTTATACAGGCAGA+AGG | - | chr5.1:55171211-55171230 | MS.gene57014:intron | 40.0% |
| ! | GGTTCTTCACATTTTCCACT+AGG | - | chr5.1:55171377-55171396 | MS.gene57014:intron | 40.0% |
| ! | GTTTTGCAGCATGAGCTTTA+AGG | + | chr5.1:55171277-55171296 | None:intergenic | 40.0% |
| ! | TCTTTTCCAGCCTTAAGATC+AGG | + | chr5.1:55170110-55170129 | None:intergenic | 40.0% |
| ! | TGTTTTCAGAACCAGACTGT+CGG | + | chr5.1:55170322-55170341 | None:intergenic | 40.0% |
| ! | TTGATGACTGATGTGCCTTT+CGG | - | chr5.1:55169838-55169857 | MS.gene57014:intron | 40.0% |
| ! | TTTGGAATGTGTCTGGATTC+AGG | - | chr5.1:55169418-55169437 | MS.gene57014:intron | 40.0% |
| ! | TTTTCCACTAGGTGACTGAT+AGG | - | chr5.1:55171388-55171407 | MS.gene57014:intron | 40.0% |
| !! | AGTATGCTTCCTTGGTGTTT+GGG | + | chr5.1:55171452-55171471 | None:intergenic | 40.0% |
| !! | CGATTGATTAACTTGCCTGA+GGG | + | chr5.1:55171503-55171522 | None:intergenic | 40.0% |
| !! | CTGTTTTGGATAGCAAGACA+TGG | - | chr5.1:55167555-55167574 | MS.gene57014:intron | 40.0% |
| !! | CTTATGATCCTCTAGCTTTG+AGG | - | chr5.1:55169593-55169612 | MS.gene57014:CDS | 40.0% |
| !! | GTGATGGTGTTGGTTATAGT+TGG | - | chr5.1:55171243-55171262 | MS.gene57014:intron | 40.0% |
| !! | TAGTATGCTTCCTTGGTGTT+TGG | + | chr5.1:55171453-55171472 | None:intergenic | 40.0% |
| !! | TCATCGGTTTGATCTCTAGT+TGG | + | chr5.1:55170215-55170234 | None:intergenic | 40.0% |
| !! | TCGATTGATTAACTTGCCTG+AGG | + | chr5.1:55171504-55171523 | None:intergenic | 40.0% |
| AAAAGCAGTCACCATGTTGG+TGG | + | chr5.1:55168514-55168533 | None:intergenic | 45.0% | |
| AACACCCAAAAAGTCACGGT+TGG | + | chr5.1:55167472-55167491 | None:intergenic | 45.0% | |
| ACCTGAAGGATCAAGGTTCT+TGG | + | chr5.1:55171880-55171899 | None:intergenic | 45.0% | |
| ACTCATGGTGAACAGTTCCA+AGG | + | chr5.1:55170145-55170164 | None:intergenic | 45.0% | |
| AGAAGCCAGAGTTCCATTCT+TGG | - | chr5.1:55170813-55170832 | MS.gene57014:intron | 45.0% | |
| AGAGAATCCTTACCTGCCAA+AGG | - | chr5.1:55171106-55171125 | MS.gene57014:intron | 45.0% | |
| AGAGGATCATAAGGAGCTGA+TGG | + | chr5.1:55169586-55169605 | None:intergenic | 45.0% | |
| AGGACCAACAAGTGGTATGT+GGG | - | chr5.1:55168019-55168038 | MS.gene57014:CDS | 45.0% | |
| ATAGGGCTCACCTGATCTTA+AGG | - | chr5.1:55170097-55170116 | MS.gene57014:intron | 45.0% | |
| ATGTGGGGTCCAGTTTGAAA+TGG | - | chr5.1:55168035-55168054 | MS.gene57014:CDS | 45.0% | |
| ATTGGAAGCTTCTCCTGTTG+AGG | - | chr5.1:55171986-55172005 | MS.gene57014:CDS | 45.0% | |
| CAAAACAGCCACTCTCAACA+AGG | + | chr5.1:55167543-55167562 | None:intergenic | 45.0% | |
| CACAGCAAAAGCTGTTGAGT+GGG | - | chr5.1:55171842-55171861 | MS.gene57014:intron | 45.0% | |
| CAGAGTTCCATTCTTGGACA+AGG | - | chr5.1:55170819-55170838 | MS.gene57014:intron | 45.0% | |
| CATAGTTGATCCTGCTTCTG+GGG | - | chr5.1:55168553-55168572 | MS.gene57014:intron | 45.0% | |
| CCAAAAAGCAGTCACCATGT+TGG | + | chr5.1:55168517-55168536 | None:intergenic | 45.0% | |
| CCAATCCCCAACCAATGTAT+AGG | + | chr5.1:55169327-55169346 | None:intergenic | 45.0% | |
| CCACTAAAGCTGCTGAACAA+TGG | - | chr5.1:55169926-55169945 | MS.gene57014:intron | 45.0% | |
| CCATAGTTGATCCTGCTTCT+GGG | - | chr5.1:55168552-55168571 | MS.gene57014:intron | 45.0% | |
| CCATGACCTAGAGGTTTCAT+CGG | + | chr5.1:55170231-55170250 | None:intergenic | 45.0% | |
| CGCAGTTACCTGAACAGTAA+AGG | + | chr5.1:55170171-55170190 | None:intergenic | 45.0% | |
| CTAGAGTACAAATGACCAGG+TGG | + | chr5.1:55169508-55169527 | None:intergenic | 45.0% | |
| CTGATCCTACTAGAGCTAAG+AGG | - | chr5.1:55166876-55166895 | MS.gene57014:CDS | 45.0% | |
| CTGGTCGAAGCCACTATAAT+TGG | + | chr5.1:55167224-55167243 | None:intergenic | 45.0% | |
| CTTAGTACCTTTGGCAGGTA+AGG | + | chr5.1:55171116-55171135 | None:intergenic | 45.0% | |
| CTTGTCCAAGAATGGAACTC+TGG | + | chr5.1:55170821-55170840 | None:intergenic | 45.0% | |
| GAAGATGGTACAATCCTCCT+TGG | - | chr5.1:55169545-55169564 | MS.gene57014:CDS | 45.0% | |
| GATCAACTATGGCTAACCGT+TGG | + | chr5.1:55168544-55168563 | None:intergenic | 45.0% | |
| GGTGTCAAATGGGTAATCTC+TGG | - | chr5.1:55170551-55170570 | MS.gene57014:intron | 45.0% | |
| GTTAGTGCCCGTTTACTTTG+CGG | + | chr5.1:55171001-55171020 | None:intergenic | 45.0% | |
| TAAACGGGCACTAACTAAGC+TGG | - | chr5.1:55171006-55171025 | MS.gene57014:intron | 45.0% | |
| TACCACGGGACCAATTATAG+TGG | - | chr5.1:55167211-55167230 | MS.gene57014:intron | 45.0% | |
| TAGGACCAACAAGTGGTATG+TGG | - | chr5.1:55168018-55168037 | MS.gene57014:CDS | 45.0% | |
| TCAACAGGAGAAGCTTCCAA+TGG | + | chr5.1:55171987-55172006 | None:intergenic | 45.0% | |
| TCAGATGAACCATGACCTAG+AGG | + | chr5.1:55170240-55170259 | None:intergenic | 45.0% | |
| TCATCCTATCAGTCACCTAG+TGG | + | chr5.1:55171395-55171414 | None:intergenic | 45.0% | |
| TCCAAGAACCTTGATCCTTC+AGG | - | chr5.1:55171876-55171895 | MS.gene57014:intron | 45.0% | |
| TCTAACCACACATTCCGAAC+TGG | - | chr5.1:55169063-55169082 | MS.gene57014:intron | 45.0% | |
| TGCCTGTAATCACAACCAAG+AGG | + | chr5.1:55169806-55169825 | None:intergenic | 45.0% | |
| TGGCTCTCTGGCAATCATAT+TGG | + | chr5.1:55170768-55170787 | None:intergenic | 45.0% | |
| ! | CCATTGTTCAGCAGCTTTAG+TGG | + | chr5.1:55169929-55169948 | None:intergenic | 45.0% |
| ! | CCTATACATTGGTTGGGGAT+TGG | - | chr5.1:55169324-55169343 | MS.gene57014:CDS | 45.0% |
| ! | CTTGTTGAGAGTGGCTGTTT+TGG | - | chr5.1:55167541-55167560 | MS.gene57014:intron | 45.0% |
| ! | GACTTTGTGGACAAGTTGGA+TGG | - | chr5.1:55169226-55169245 | MS.gene57014:intron | 45.0% |
| ! | GCACTGCTACTTCAGCTTAA+AGG | - | chr5.1:55171560-55171579 | MS.gene57014:intron | 45.0% |
| ! | GTCTGGATTCAGGTTCTGTT+TGG | - | chr5.1:55169428-55169447 | MS.gene57014:intron | 45.0% |
| ! | TACATTGGTTGGGGATTGGA+TGG | - | chr5.1:55169328-55169347 | MS.gene57014:CDS | 45.0% |
| ! | TGTTCTACTCTCTGGAGGAT+TGG | - | chr5.1:55169861-55169880 | MS.gene57014:intron | 45.0% |
| ! | TTTGAGGCATGCCTTTGAGA+AGG | - | chr5.1:55169609-55169628 | MS.gene57014:CDS | 45.0% |
| !! | CATTTTGAGTGTTTCCCACC+TGG | - | chr5.1:55169490-55169509 | MS.gene57014:intron | 45.0% |
| !! | CCAACATGGTGACTGCTTTT+TGG | - | chr5.1:55168514-55168533 | MS.gene57014:intron | 45.0% |
| !! | GTATGCTTCCTTGGTGTTTG+GGG | + | chr5.1:55171451-55171470 | None:intergenic | 45.0% |
| !! | TGTGGTATACTTGCTGTGCT+TGG | - | chr5.1:55166848-55166867 | MS.gene57014:CDS | 45.0% |
| !! | TTGTTTTGCAGAACTCGGCA+AGG | - | chr5.1:55171784-55171803 | MS.gene57014:intron | 45.0% |
| !!! | ACTGCTTTTTGGCACACCAA+CGG | - | chr5.1:55168525-55168544 | MS.gene57014:intron | 45.0% |
| !! | ATTAAATATATTAGATAATA+TGG | - | chr5.1:55167434-55167453 | MS.gene57014:CDS | 5.0% |
| AAGGCATGCCTCAAAGCTAG+AGG | + | chr5.1:55169604-55169623 | None:intergenic | 50.0% | |
| AGCCACTATAATTGGTCCCG+TGG | + | chr5.1:55167216-55167235 | None:intergenic | 50.0% | |
| ATTGCCTGCGTGAAAGCTCA+AGG | + | chr5.1:55166910-55166929 | None:intergenic | 50.0% | |
| CAATCCTCCTTGGTACTCTG+AGG | - | chr5.1:55169555-55169574 | MS.gene57014:CDS | 50.0% | |
| CACTTCCAGTTCGGAATGTG+TGG | + | chr5.1:55169071-55169090 | None:intergenic | 50.0% | |
| CCAGAGAGTAGAACACCGAA+AGG | + | chr5.1:55169856-55169875 | None:intergenic | 50.0% | |
| CCCAGAAGCAGGATCAACTA+TGG | + | chr5.1:55168555-55168574 | None:intergenic | 50.0% | |
| CCGATGAAACCTCTAGGTCA+TGG | - | chr5.1:55170228-55170247 | MS.gene57014:intron | 50.0% | |
| CTCTGAATGGCAACCTCAAC+AGG | + | chr5.1:55172002-55172021 | None:intergenic | 50.0% | |
| CTGCTCTACCTGAAGGATCA+AGG | + | chr5.1:55171887-55171906 | None:intergenic | 50.0% | |
| CTGTTGAGTGGGATGCTTCT+TGG | - | chr5.1:55171853-55171872 | MS.gene57014:intron | 50.0% | |
| GCACAGCAAAAGCTGTTGAG+TGG | - | chr5.1:55171841-55171860 | MS.gene57014:intron | 50.0% | |
| GCCATAGTTGATCCTGCTTC+TGG | - | chr5.1:55168551-55168570 | MS.gene57014:intron | 50.0% | |
| GGACCAACAAGTGGTATGTG+GGG | - | chr5.1:55168020-55168039 | MS.gene57014:CDS | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr5.1:55170640-55170659 | MS.gene57014:intron | 50.0% | |
| TGACCTTGCGGCATGTTTCT+TGG | + | chr5.1:55170646-55170665 | None:intergenic | 50.0% | |
| TGAGGTTGCCATTCAGAGCT+AGG | - | chr5.1:55172004-55172023 | MS.gene57014:CDS | 50.0% | |
| TGTTTGACACGTGACGGTGT+TGG | - | chr5.1:55171592-55171611 | MS.gene57014:intron | 50.0% | |
| ! | AGACTGTCGGCTGGTTCAAT+CGG | + | chr5.1:55170309-55170328 | None:intergenic | 50.0% |
| ! | ATAGCCTCAGAGTACCAAGG+AGG | + | chr5.1:55169562-55169581 | None:intergenic | 50.0% |
| ! | CAGCAGCTTTAGTGGTTGCT+AGG | + | chr5.1:55169921-55169940 | None:intergenic | 50.0% |
| ! | CTTTGAGAGGTTCTTCCCTC+AGG | - | chr5.1:55171485-55171504 | MS.gene57014:intron | 50.0% |
| ! | GGAATAGCCTCAGAGTACCA+AGG | + | chr5.1:55169565-55169584 | None:intergenic | 50.0% |
| !! | CCTTTCGGTGTTCTACTCTC+TGG | - | chr5.1:55169853-55169872 | MS.gene57014:intron | 50.0% |
| !! | CGAACCCTCTTAGCTCTAGT+AGG | + | chr5.1:55166884-55166903 | None:intergenic | 50.0% |
| !! | CGTAACAGATTGAAGCACCG+TGG | - | chr5.1:55168470-55168489 | MS.gene57014:intron | 50.0% |
| !! | CTCATTCTGTGTTGGCCTTG+AGG | - | chr5.1:55169963-55169982 | MS.gene57014:intron | 50.0% |
| !! | CTTGGTGTTTGGGGTGTTGT+GGG | + | chr5.1:55171442-55171461 | None:intergenic | 50.0% |
| !! | TTCGGTGTTCTACTCTCTGG+AGG | - | chr5.1:55169856-55169875 | MS.gene57014:intron | 50.0% |
| !! | TTGGTGTTTGGGGTGTTGTG+GGG | + | chr5.1:55171441-55171460 | None:intergenic | 50.0% |
| CATGCAACAGTTGGTCCTCC+AGG | + | chr5.1:55171819-55171838 | None:intergenic | 55.0% | |
| CCACAACACCCCAAACACCA+AGG | - | chr5.1:55171440-55171459 | MS.gene57014:intron | 55.0% | |
| CCTTCAGGTAGAGCAGCACT+TGG | - | chr5.1:55171891-55171910 | MS.gene57014:intron | 55.0% | |
| GATTGAACCAGCCGACAGTC+TGG | - | chr5.1:55170308-55170327 | MS.gene57014:CDS | 55.0% | |
| GCAAGGCTAACTGTTCCTGG+AGG | - | chr5.1:55171801-55171820 | MS.gene57014:intron | 55.0% | |
| GCTGCTTCCTGAGAGCTTCA+TGG | + | chr5.1:55169041-55169060 | None:intergenic | 55.0% | |
| GCTGTGCTGCATGCAACAGT+TGG | + | chr5.1:55171828-55171847 | None:intergenic | 55.0% | |
| GGACCCCACATACCACTTGT+TGG | + | chr5.1:55168026-55168045 | None:intergenic | 55.0% | |
| GGCTCACCTGATCTTAAGGC+TGG | - | chr5.1:55170101-55170120 | MS.gene57014:intron | 55.0% | |
| GTGTCCTTGAGCTTTCACGC+AGG | - | chr5.1:55166903-55166922 | MS.gene57014:CDS | 55.0% | |
| TCGGCAAGGCTAACTGTTCC+TGG | - | chr5.1:55171798-55171817 | MS.gene57014:intron | 55.0% | |
| TGCTAGGTAGCGAGCAGTGA+TGG | + | chr5.1:55169905-55169924 | None:intergenic | 55.0% | |
| TTCAGAACCAGACTGTCGGC+TGG | + | chr5.1:55170318-55170337 | None:intergenic | 55.0% | |
| ! | AGAGGTTGATCCCCAGAAGC+AGG | + | chr5.1:55168566-55168585 | None:intergenic | 55.0% |
| ! | CCAAGTGCTGCTCTACCTGA+AGG | + | chr5.1:55171894-55171913 | None:intergenic | 55.0% |
| !! | CCTTGGTGTTTGGGGTGTTG+TGG | + | chr5.1:55171443-55171462 | None:intergenic | 55.0% |
| !! | TGGTGTTTGGGGTGTTGTGG+GGG | + | chr5.1:55171440-55171459 | None:intergenic | 55.0% |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr5.1:55168500-55168519 | MS.gene57014:intron | 60.0% |
| ACCGTGGCCCTGACTGGAGT+GGG | - | chr5.1:55168486-55168505 | MS.gene57014:intron | 65.0% | |
| GGTGGAGCCCACTCCAGTCA+GGG | + | chr5.1:55168496-55168515 | None:intergenic | 65.0% | |
| TGGTGGAGCCCACTCCAGTC+AGG | + | chr5.1:55168497-55168516 | None:intergenic | 65.0% | |
| !! | TGAAGCACCGTGGCCCTGAC+TGG | - | chr5.1:55168480-55168499 | MS.gene57014:intron | 65.0% |
| CACCGTGGCCCTGACTGGAG+TGG | - | chr5.1:55168485-55168504 | MS.gene57014:intron | 70.0% | |
| GCCCACTCCAGTCAGGGCCA+CGG | + | chr5.1:55168490-55168509 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 55166845 | 55172025 | 55166845 | ID=MS.gene57014 |
| chr5.1 | mRNA | 55166845 | 55172025 | 55166845 | ID=MS.gene57014.t1;Parent=MS.gene57014 |
| chr5.1 | exon | 55171972 | 55172025 | 55171972 | ID=MS.gene57014.t1.exon1;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55171972 | 55172025 | 55171972 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55170254 | 55170385 | 55170254 | ID=MS.gene57014.t1.exon2;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55170254 | 55170385 | 55170254 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55169757 | 55169852 | 55169757 | ID=MS.gene57014.t1.exon3;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55169757 | 55169852 | 55169757 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55169521 | 55169662 | 55169521 | ID=MS.gene57014.t1.exon4;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55169521 | 55169662 | 55169521 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55169240 | 55169430 | 55169240 | ID=MS.gene57014.t1.exon5;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55169240 | 55169430 | 55169240 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55168886 | 55169047 | 55168886 | ID=MS.gene57014.t1.exon6;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55168886 | 55169047 | 55168886 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55168689 | 55168769 | 55168689 | ID=MS.gene57014.t1.exon7;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55168689 | 55168769 | 55168689 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55168209 | 55168430 | 55168209 | ID=MS.gene57014.t1.exon8;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55168209 | 55168430 | 55168209 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55167985 | 55168119 | 55167985 | ID=MS.gene57014.t1.exon9;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55167985 | 55168119 | 55167985 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55167743 | 55167823 | 55167743 | ID=MS.gene57014.t1.exon10;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55167743 | 55167823 | 55167743 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55167572 | 55167658 | 55167572 | ID=MS.gene57014.t1.exon11;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55167572 | 55167658 | 55167572 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55167364 | 55167471 | 55167364 | ID=MS.gene57014.t1.exon12;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55167364 | 55167471 | 55167364 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| chr5.1 | exon | 55166845 | 55167075 | 55166845 | ID=MS.gene57014.t1.exon13;Parent=MS.gene57014.t1 |
| chr5.1 | CDS | 55166845 | 55167075 | 55166845 | ID=cds.MS.gene57014.t1;Parent=MS.gene57014.t1 |
| Gene Sequence |
| Protein sequence |
