Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57289.t1 | XP_013442186.1 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.00E+00 | 1223.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57289.t1 | Q6DGE9 | 37.5 | 88 | 52 | 1 | 408 | 495 | 12 | 96 | 8.4e-07 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57289.t1 | A0A072TG43 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0e+00 | 1223.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04985 | MS.gene57289 | 0.800892 | 1.16E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene57289 | 0.8066 | 7.60E-50 | -1.69E-46 |
| MS.gene050009 | MS.gene57289 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene050071 | MS.gene57289 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene57289 | -0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene050297 | MS.gene57289 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene050818 | MS.gene57289 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene050894 | MS.gene57289 | 0.810551 | 1.09E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene57289 | 0.81901 | 1.45E-52 | -1.69E-46 |
| MS.gene052383 | MS.gene57289 | 0.805612 | 1.23E-49 | -1.69E-46 |
| MS.gene053416 | MS.gene57289 | 0.805374 | 1.38E-49 | -1.69E-46 |
| MS.gene053417 | MS.gene57289 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene054614 | MS.gene57289 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene054999 | MS.gene57289 | 0.866309 | 3.13E-65 | -1.69E-46 |
| MS.gene055251 | MS.gene57289 | 0.873472 | 1.43E-67 | -1.69E-46 |
| MS.gene055331 | MS.gene57289 | 0.868971 | 4.39E-66 | -1.69E-46 |
| MS.gene056266 | MS.gene57289 | -0.840784 | 7.06E-58 | -1.69E-46 |
| MS.gene058210 | MS.gene57289 | 0.800982 | 1.12E-48 | -1.69E-46 |
| MS.gene058382 | MS.gene57289 | 0.813276 | 2.78E-51 | -1.69E-46 |
| MS.gene058386 | MS.gene57289 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene57289 | 0.815701 | 8.08E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene57289 | 0.801272 | 9.74E-49 | -1.69E-46 |
| MS.gene060076 | MS.gene57289 | 0.811523 | 6.71E-51 | -1.69E-46 |
| MS.gene06042 | MS.gene57289 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene57289 | 0.841163 | 5.61E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57289.t1 | MTR_0276s0010 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| MS.gene57289.t1 | MTR_3g102680 | 51.532 | 555 | 255 | 6 | 8 | 556 | 36 | 582 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57289.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene57289.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene57289.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene57289.t1 | AT5G43120 | 45.361 | 582 | 294 | 9 | 11 | 581 | 23 | 591 | 2.56e-174 | 508 |
| MS.gene57289.t1 | AT5G43120 | 46.570 | 554 | 272 | 9 | 11 | 553 | 23 | 563 | 1.26e-173 | 506 |
| MS.gene57289.t1 | AT3G50030 | 43.173 | 542 | 246 | 8 | 8 | 544 | 9 | 493 | 3.58e-139 | 414 |
Find 152 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCTGGAAATATTTC+TGG | 0.102747 | 4.1:+10236129 | MS.gene57289:CDS |
| TTTACCTTGTGACATGTATT+TGG | 0.181144 | 4.1:-10235102 | None:intergenic |
| AATAAGGAATGTATATATTT+TGG | 0.230293 | 4.1:-10234423 | None:intergenic |
| AACTAATCGCTCAGCGTAAT+CGG | 0.242598 | 4.1:-10236463 | None:intergenic |
| GTTAGCAAAAGAAAGTTTAT+TGG | 0.248766 | 4.1:+10236368 | MS.gene57289:CDS |
| CCAAGGAACTCATTGCTAAT+TGG | 0.253973 | 4.1:-10234663 | None:intergenic |
| TGCTCGCCTCCAGAGACTTT+TGG | 0.259141 | 4.1:-10236325 | None:intergenic |
| ATTCCCAGCTCTATGAATTC+AGG | 0.267825 | 4.1:-10234337 | None:intergenic |
| CACCACCGTCACCCTGATTA+TGG | 0.279873 | 4.1:-10236545 | None:intergenic |
| GTTCGAAGCAGAGATTAAAA+TGG | 0.285308 | 4.1:+10236028 | MS.gene57289:CDS |
| GAGAACAACTCTCTCCTTCT+TGG | 0.301124 | 4.1:-10236199 | None:intergenic |
| ATGATATGAGCTGCATAATA+AGG | 0.301312 | 4.1:-10234439 | None:intergenic |
| TGGCTATTGATTGTCTTCTA+TGG | 0.301791 | 4.1:+10235067 | MS.gene57289:CDS |
| TTCTCCCTATCAGTGGTCTT+TGG | 0.309537 | 4.1:+10234287 | MS.gene57289:CDS |
| GACAGCTAGTGAAAGTGATA+TGG | 0.315697 | 4.1:+10236605 | MS.gene57289:CDS |
| GCATGGTGGCGTCCATAATC+AGG | 0.330107 | 4.1:+10236533 | MS.gene57289:CDS |
| CTTAATATGTAGATCTTCCT+TGG | 0.340124 | 4.1:-10236064 | None:intergenic |
| TGGTTCCTACACAATGAATA+TGG | 0.343437 | 4.1:+10234462 | MS.gene57289:CDS |
| TTCAGATGATTGGCAGTATA+TGG | 0.344104 | 4.1:+10235047 | MS.gene57289:CDS |
| TTTACCAATATGTTGATAGA+AGG | 0.350454 | 4.1:+10234704 | MS.gene57289:CDS |
| GAGGGTAGCAGTTAGAGCTT+TGG | 0.371302 | 4.1:+10234570 | MS.gene57289:CDS |
| TATTATGCAGCTCATATCAT+TGG | 0.378316 | 4.1:+10234442 | MS.gene57289:CDS |
| CGGCATGGGCGGTGTTGAAA+TGG | 0.381441 | 4.1:+10234756 | MS.gene57289:CDS |
| TTAGCCTTCTATCAACATAT+TGG | 0.382403 | 4.1:-10234708 | None:intergenic |
| GAAAATTCACCAGCTGGTAT+TGG | 0.383617 | 4.1:+10234931 | MS.gene57289:CDS |
| TAGAAATTCTTGCTTGCATA+TGG | 0.385235 | 4.1:-10234872 | None:intergenic |
| GTCTAGGAAGGCCGAGGAAT+GGG | 0.391308 | 4.1:+10234780 | MS.gene57289:CDS |
| AGGGTAGCAGTTAGAGCTTT+GGG | 0.392182 | 4.1:+10234571 | MS.gene57289:CDS |
| CATATGGTAGGAAGAAATTC+CGG | 0.398197 | 4.1:-10234856 | None:intergenic |
| TTGCTCGCTCTTCAGATGAT+TGG | 0.408759 | 4.1:+10235037 | MS.gene57289:CDS |
| GCGATGATGACGACGGTGAT+TGG | 0.412821 | 4.1:+10236643 | MS.gene57289:CDS |
| TTCTAAGAGGTAGGTTGACT+TGG | 0.413383 | 4.1:+10234539 | MS.gene57289:CDS |
| CTCGAGAATTTCACCGTGAC+TGG | 0.417747 | 4.1:-10234632 | None:intergenic |
| CCAATTAGCAATGAGTTCCT+TGG | 0.422140 | 4.1:+10234663 | MS.gene57289:CDS |
| CACAATGCTTCAATAATTCC+AGG | 0.425354 | 4.1:-10235009 | None:intergenic |
| ACTAATCGCTCAGCGTAATC+GGG | 0.426153 | 4.1:-10236462 | None:intergenic |
| ATCGTCATGCCAAAAGTCTC+TGG | 0.426995 | 4.1:+10236316 | MS.gene57289:CDS |
| AATGCATGTCTGCTCTCATA+TGG | 0.429025 | 4.1:+10234365 | MS.gene57289:CDS |
| ACACTTGCTCTGCGTTTGCT+TGG | 0.430357 | 4.1:-10234217 | None:intergenic |
| GTGTTCCAAAGACCACTGAT+AGG | 0.430593 | 4.1:-10234292 | None:intergenic |
| AAATATTTCCAGATGAGAAA+AGG | 0.437915 | 4.1:-10236125 | None:intergenic |
| TGCACGGGTAGCATCACTTA+TGG | 0.449721 | 4.1:-10236271 | None:intergenic |
| CGACGATGACAGGAAAGAAT+AGG | 0.453401 | 4.1:+10236671 | MS.gene57289:CDS |
| GGACCTGTTGCTAGTTGCCC+TGG | 0.461427 | 4.1:+10234991 | MS.gene57289:CDS |
| GGTGACGGTGGTGATATATA+TGG | 0.463445 | 4.1:+10236555 | MS.gene57289:CDS |
| GAGTTGTTCTCTATAGCAAT+CGG | 0.470290 | 4.1:+10236211 | MS.gene57289:CDS |
| CCTTTAGTTGAGCTTCTAAG+AGG | 0.473520 | 4.1:+10234526 | MS.gene57289:CDS |
| TATGTAGGTAATTGATAAAG+TGG | 0.475329 | 4.1:+10235846 | MS.gene57289:intron |
| GCACTGGTTGTCAAGCTTGA+AGG | 0.477662 | 4.1:+10236096 | MS.gene57289:CDS |
| AATATTTCCAGATGAGAAAA+GGG | 0.478637 | 4.1:-10236124 | None:intergenic |
| GTTAATGAAAATTCACCAGC+TGG | 0.484392 | 4.1:+10234925 | MS.gene57289:CDS |
| TGACCCTGAATTCATAGAGC+TGG | 0.484686 | 4.1:+10234333 | MS.gene57289:CDS |
| TTCGAAGCAGAGATTAAAAT+GGG | 0.485000 | 4.1:+10236029 | MS.gene57289:CDS |
| AGAGATCAGGATCATTTGAC+TGG | 0.487652 | 4.1:-10236419 | None:intergenic |
| TATTAAGCAGGCTGCAGCAC+TGG | 0.488628 | 4.1:+10236080 | MS.gene57289:CDS |
| TTCCCAGCTCTATGAATTCA+GGG | 0.490784 | 4.1:-10234336 | None:intergenic |
| ATTCCAGGGCAACTAGCAAC+AGG | 0.491637 | 4.1:-10234994 | None:intergenic |
| CATTCCGAGTCATCAGTCTC+TGG | 0.491761 | 4.1:-10236579 | None:intergenic |
| CAAAAGAAGCATCCTGGGTA+TGG | 0.491996 | 4.1:-10234175 | None:intergenic |
| TTAATATGTAGATCTTCCTT+GGG | 0.495234 | 4.1:-10236063 | None:intergenic |
| GTGTCAAGATGATGATGGTC+AGG | 0.496111 | 4.1:+10234264 | MS.gene57289:CDS |
| GGGCTAGCCAACTGCAATGT+TGG | 0.498049 | 4.1:+10234800 | MS.gene57289:CDS |
| TGCATCGAGACACAAGGGTC+GGG | 0.498166 | 4.1:+10235955 | MS.gene57289:CDS |
| TCTATGAATTCAGGGTCATT+CGG | 0.498186 | 4.1:-10234328 | None:intergenic |
| ACAATTTGTCATCAGAAGCT+TGG | 0.499520 | 4.1:+10234964 | MS.gene57289:CDS |
| GAAAGTGATATGGGAAATGA+TGG | 0.499970 | 4.1:+10236615 | MS.gene57289:CDS |
| TGATCTTCTTACACGCGGCA+TGG | 0.501426 | 4.1:+10234741 | MS.gene57289:CDS |
| AGAGACTGATGACTCGGAAT+GGG | 0.505401 | 4.1:+10236581 | MS.gene57289:CDS |
| ATGACACAAAAGAAGCATCC+TGG | 0.509285 | 4.1:-10234181 | None:intergenic |
| ACAGCTAGTGAAAGTGATAT+GGG | 0.510559 | 4.1:+10236606 | MS.gene57289:CDS |
| CTCTCCTTCTTGGATCTCAT+AGG | 0.510858 | 4.1:-10236189 | None:intergenic |
| TTCACCGTGACTGGCTAAAG+TGG | 0.511711 | 4.1:-10234623 | None:intergenic |
| GGCTAAAGTGGGAAAAGTGC+TGG | 0.517032 | 4.1:-10234611 | None:intergenic |
| GTTGACTTGGGTTGAGCAGA+GGG | 0.523039 | 4.1:+10234552 | MS.gene57289:CDS |
| CAGAGACTGATGACTCGGAA+TGG | 0.524761 | 4.1:+10236580 | MS.gene57289:CDS |
| GACCCTGAATTCATAGAGCT+GGG | 0.530003 | 4.1:+10234334 | MS.gene57289:CDS |
| AGAAGCAGATGCGTGCTGCT+TGG | 0.530091 | 4.1:+10236487 | MS.gene57289:CDS |
| CTTAATAAGCCAATACCAGC+TGG | 0.532024 | 4.1:-10234940 | None:intergenic |
| ATTGGAATAACGACGATGAC+AGG | 0.533512 | 4.1:+10236661 | MS.gene57289:CDS |
| GGAAGATCTACATATTAAGC+AGG | 0.534911 | 4.1:+10236068 | MS.gene57289:CDS |
| TTCTTCCATATTCATTGTGT+AGG | 0.537968 | 4.1:-10234467 | None:intergenic |
| TTTGTCATCAGAAGCTTGGT+AGG | 0.539277 | 4.1:+10234968 | MS.gene57289:CDS |
| GCACAAGCTTATGACATGCT+AGG | 0.540972 | 4.1:+10236345 | MS.gene57289:CDS |
| CTTCTTACACGCGGCATGGG+CGG | 0.541650 | 4.1:+10234745 | MS.gene57289:CDS |
| TCCGCAAGGTCAACTAATGC+AGG | 0.542050 | 4.1:-10235871 | None:intergenic |
| CCTCTTAGAAGCTCAACTAA+AGG | 0.542272 | 4.1:-10234526 | None:intergenic |
| GATCTTCTTACACGCGGCAT+GGG | 0.543576 | 4.1:+10234742 | MS.gene57289:CDS |
| TCTAAGAGGTAGGTTGACTT+GGG | 0.544283 | 4.1:+10234540 | MS.gene57289:CDS |
| ATCAAAATACTCAGAAGCAT+TGG | 0.544343 | 4.1:+10236158 | MS.gene57289:CDS |
| GATATGGGAAATGATGGAAT+TGG | 0.544935 | 4.1:+10236621 | MS.gene57289:CDS |
| CACAAGCTTATGACATGCTA+GGG | 0.553569 | 4.1:+10236346 | MS.gene57289:CDS |
| TTGTCATCAGAAGCTTGGTA+GGG | 0.554096 | 4.1:+10234969 | MS.gene57289:CDS |
| TGCTGCTTGGTTATTTCGAG+AGG | 0.554603 | 4.1:+10236500 | MS.gene57289:CDS |
| TAACAAAACTACCTGGCATG+TGG | 0.556418 | 4.1:+10234893 | MS.gene57289:CDS |
| AACAAAACTACCTGGCATGT+GGG | 0.557380 | 4.1:+10234894 | MS.gene57289:CDS |
| ACAAGACCACCCCACATGCC+AGG | 0.559253 | 4.1:-10234904 | None:intergenic |
| AGTCTAGGAAGGCCGAGGAA+TGG | 0.560531 | 4.1:+10234779 | MS.gene57289:CDS |
| CAAGATTGCATCGAGACACA+AGG | 0.563325 | 4.1:+10235949 | MS.gene57289:CDS |
| AGTTGTTCTCTATAGCAATC+GGG | 0.563923 | 4.1:+10236212 | MS.gene57289:CDS |
| TCGCACTAAAGAACAGATAG+AGG | 0.568924 | 4.1:+10235996 | MS.gene57289:CDS |
| CTTGCGGAGATTACAACTCT+AGG | 0.571036 | 4.1:+10235886 | MS.gene57289:CDS |
| TGTTCCAAAGACCACTGATA+GGG | 0.571674 | 4.1:-10234291 | None:intergenic |
| ATCTTGAAGAACACTGACAA+TGG | 0.574244 | 4.1:-10235932 | None:intergenic |
| TGTCATCAGAAGCTTGGTAG+GGG | 0.574943 | 4.1:+10234970 | MS.gene57289:CDS |
| TAGTTGAGCTTCTAAGAGGT+AGG | 0.575441 | 4.1:+10234530 | MS.gene57289:CDS |
| GTCTGTGGAGACATAGTGCA+CGG | 0.575568 | 4.1:-10236287 | None:intergenic |
| GGCGTCCATAATCAGGGTGA+CGG | 0.576294 | 4.1:+10236540 | MS.gene57289:CDS |
| GCAGAAAGTTCTGTGCATGC+TGG | 0.577817 | 4.1:+10234493 | MS.gene57289:CDS |
| CACTGTGATCTTCTTACACG+CGG | 0.580191 | 4.1:+10234736 | MS.gene57289:CDS |
| TGACACAAAAGAAGCATCCT+GGG | 0.582906 | 4.1:-10234180 | None:intergenic |
| AATTCTTGCTTGCATATGGT+AGG | 0.583132 | 4.1:-10234868 | None:intergenic |
| CGAGAGGCAGCTGTTAAGCA+TGG | 0.584903 | 4.1:+10236516 | MS.gene57289:CDS |
| GGTTGACTTGGGTTGAGCAG+AGG | 0.586421 | 4.1:+10234551 | MS.gene57289:CDS |
| CTTAGAAGCTCAACTAAAGG+AGG | 0.588830 | 4.1:-10234523 | None:intergenic |
| GAAGAGACCAACATTGCAGT+TGG | 0.590523 | 4.1:-10234807 | None:intergenic |
| CATGGTGGCGTCCATAATCA+GGG | 0.591600 | 4.1:+10236534 | MS.gene57289:CDS |
| AAGCATGGATAAAGTTTCAT+CGG | 0.592980 | 4.1:+10234147 | None:intergenic |
| GCGGTGTTGAAATGGAGTCT+AGG | 0.598414 | 4.1:+10234764 | MS.gene57289:CDS |
| CAGTTGGCTAGCCCATTCCT+CGG | 0.603223 | 4.1:-10234791 | None:intergenic |
| CTTCCGTGTCAAGATGATGA+TGG | 0.604349 | 4.1:+10234259 | MS.gene57289:CDS |
| TTGCATCGAGACACAAGGGT+CGG | 0.605332 | 4.1:+10235954 | MS.gene57289:CDS |
| TGTTGAAATGGAGTCTAGGA+AGG | 0.605706 | 4.1:+10234768 | MS.gene57289:CDS |
| GTGTCCTATGAGATCCAAGA+AGG | 0.606913 | 4.1:+10236185 | MS.gene57289:CDS |
| ACAATGCTTCAATAATTCCA+GGG | 0.608618 | 4.1:-10235008 | None:intergenic |
| GTGTGAATAAACTATTTCCA+AGG | 0.609966 | 4.1:-10234680 | None:intergenic |
| TTTCCCACTTTAGCCAGTCA+CGG | 0.611995 | 4.1:+10234619 | MS.gene57289:CDS |
| ACAAAACTACCTGGCATGTG+GGG | 0.615879 | 4.1:+10234895 | MS.gene57289:CDS |
| GGTCAGGTTCTCCCTATCAG+TGG | 0.617990 | 4.1:+10234280 | MS.gene57289:CDS |
| ATGTCTGCTCTCATATGGAA+AGG | 0.618281 | 4.1:+10234370 | MS.gene57289:CDS |
| AATGGAGTCTAGGAAGGCCG+AGG | 0.620005 | 4.1:+10234774 | MS.gene57289:CDS |
| GCATCACTTATGGCAGCCAA+AGG | 0.625977 | 4.1:-10236261 | None:intergenic |
| TCACCGTGACTGGCTAAAGT+GGG | 0.627571 | 4.1:-10234622 | None:intergenic |
| GAGATCAGGATCATTTGACT+GGG | 0.629493 | 4.1:-10236418 | None:intergenic |
| AAGGACTGAAGAATCGACGC+TGG | 0.632880 | 4.1:+10234389 | MS.gene57289:CDS |
| TGGTCCAGAGACTGATGACT+CGG | 0.634939 | 4.1:+10236575 | MS.gene57289:CDS |
| AAACTACCTGGCATGTGGGG+TGG | 0.640971 | 4.1:+10234898 | MS.gene57289:CDS |
| TGGTCTTTGGAACACAGCAA+TGG | 0.643301 | 4.1:+10234300 | MS.gene57289:CDS |
| GAATTTCTAACAAAACTACC+TGG | 0.643669 | 4.1:+10234886 | MS.gene57289:CDS |
| ATGGGAAAAGAATATGCCCA+AGG | 0.649974 | 4.1:+10236047 | MS.gene57289:CDS |
| GTCCATAATCAGGGTGACGG+TGG | 0.652767 | 4.1:+10236543 | MS.gene57289:CDS |
| TCATCGGACTGTCCATACCC+AGG | 0.655137 | 4.1:+10234163 | MS.gene57289:CDS |
| CTAGAGTTGTAATCTCCGCA+AGG | 0.661496 | 4.1:-10235885 | None:intergenic |
| GCCTGCATTAGTTGACCTTG+CGG | 0.662681 | 4.1:+10235870 | MS.gene57289:CDS |
| AGATCCAAATACATGTCACA+AGG | 0.671859 | 4.1:+10235098 | MS.gene57289:CDS |
| TCTGTGGAGACATAGTGCAC+GGG | 0.677330 | 4.1:-10236286 | None:intergenic |
| GAGGCAGCTGTTAAGCATGG+TGG | 0.678228 | 4.1:+10236519 | MS.gene57289:CDS |
| GTCATGCCAAAAGTCTCTGG+AGG | 0.684030 | 4.1:+10236319 | MS.gene57289:CDS |
| AAGATTGCATCGAGACACAA+GGG | 0.684193 | 4.1:+10235950 | MS.gene57289:CDS |
| CATGACGATTGACAGGTCTG+TGG | 0.690518 | 4.1:-10236302 | None:intergenic |
| TGACCATCATCATCTTGACA+CGG | 0.697231 | 4.1:-10234262 | None:intergenic |
| GGAATTGGCGATGATGACGA+CGG | 0.760960 | 4.1:+10236636 | MS.gene57289:CDS |
| ATGATCCTGATCTCTCACTG+AGG | 0.765682 | 4.1:+10236427 | MS.gene57289:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATAAAACAAAGAA+AGG | - | chr4.1:10235544-10235563 | None:intergenic | 10.0% |
| !! | ATTCATTTAGAAATAAAAGT+AGG | + | chr4.1:10235358-10235377 | MS.gene57289:intron | 15.0% |
| !!! | AATAAGGAATGTATATATTT+TGG | - | chr4.1:10234426-10234445 | None:intergenic | 15.0% |
| !! | ACTTTAATTCATCTAGAAAT+TGG | + | chr4.1:10235287-10235306 | MS.gene57289:intron | 20.0% |
| ! | AAATATTTCCAGATGAGAAA+AGG | - | chr4.1:10236128-10236147 | None:intergenic | 25.0% |
| ! | AATATTTCCAGATGAGAAAA+GGG | - | chr4.1:10236127-10236146 | None:intergenic | 25.0% |
| ! | ATGAAAGCAATGATCAAATA+AGG | - | chr4.1:10235739-10235758 | None:intergenic | 25.0% |
| ! | CATCTAAAAACATTGATGTA+TGG | + | chr4.1:10235580-10235599 | MS.gene57289:intron | 25.0% |
| ! | GTTAGCAAAAGAAAGTTTAT+TGG | + | chr4.1:10236368-10236387 | MS.gene57289:CDS | 25.0% |
| ! | TATGTAGGTAATTGATAAAG+TGG | + | chr4.1:10235846-10235865 | MS.gene57289:intron | 25.0% |
| ! | TTAATATGTAGATCTTCCTT+GGG | - | chr4.1:10236066-10236085 | None:intergenic | 25.0% |
| !! | TTTACCAATATGTTGATAGA+AGG | + | chr4.1:10234704-10234723 | MS.gene57289:CDS | 25.0% |
| !!! | CAATGTTTTTAGATGTTCAA+TGG | - | chr4.1:10235575-10235594 | None:intergenic | 25.0% |
| !!! | TAATTGCTTTGCTTTTAAAC+CGG | + | chr4.1:10234837-10234856 | MS.gene57289:CDS | 25.0% |
| AAAGCAATGATCAAATAAGG+AGG | - | chr4.1:10235736-10235755 | None:intergenic | 30.0% | |
| ACAATGCTTCAATAATTCCA+GGG | - | chr4.1:10235011-10235030 | None:intergenic | 30.0% | |
| ATGATATGAGCTGCATAATA+AGG | - | chr4.1:10234442-10234461 | None:intergenic | 30.0% | |
| ATGTATATATCTCGTAGTGA+AGG | - | chr4.1:10235424-10235443 | None:intergenic | 30.0% | |
| ATTTGCACTCTTGAACATTA+AGG | + | chr4.1:10235188-10235207 | MS.gene57289:intron | 30.0% | |
| ATTTGTTTACTTTAACGCCT+TGG | + | chr4.1:10235816-10235835 | MS.gene57289:intron | 30.0% | |
| CTTAAACTTAGTTATCACTG+CGG | + | chr4.1:10235639-10235658 | MS.gene57289:intron | 30.0% | |
| CTTAATATGTAGATCTTCCT+TGG | - | chr4.1:10236067-10236086 | None:intergenic | 30.0% | |
| GAAAAGGAGAAAACAAAGAA+AGG | + | chr4.1:10235484-10235503 | MS.gene57289:intron | 30.0% | |
| GAATTTCTAACAAAACTACC+TGG | + | chr4.1:10234886-10234905 | MS.gene57289:CDS | 30.0% | |
| GTGTGAATAAACTATTTCCA+AGG | - | chr4.1:10234683-10234702 | None:intergenic | 30.0% | |
| TACCTACATAATATATGCCA+AGG | - | chr4.1:10235836-10235855 | None:intergenic | 30.0% | |
| TAGAAATTCTTGCTTGCATA+TGG | - | chr4.1:10234875-10234894 | None:intergenic | 30.0% | |
| TATTATGCAGCTCATATCAT+TGG | + | chr4.1:10234442-10234461 | MS.gene57289:CDS | 30.0% | |
| TTCGAAGCAGAGATTAAAAT+GGG | + | chr4.1:10236029-10236048 | MS.gene57289:CDS | 30.0% | |
| TTCTCATCTGGAAATATTTC+TGG | + | chr4.1:10236129-10236148 | MS.gene57289:CDS | 30.0% | |
| TTCTTCCATATTCATTGTGT+AGG | - | chr4.1:10234470-10234489 | None:intergenic | 30.0% | |
| TTTACCTTGTGACATGTATT+TGG | - | chr4.1:10235105-10235124 | None:intergenic | 30.0% | |
| ! | AAGAGTGCAAATGAATACAT+TGG | - | chr4.1:10235180-10235199 | None:intergenic | 30.0% |
| ! | ATCAAAATACTCAGAAGCAT+TGG | + | chr4.1:10236158-10236177 | MS.gene57289:CDS | 30.0% |
| ! | TTAGCCTTCTATCAACATAT+TGG | - | chr4.1:10234711-10234730 | None:intergenic | 30.0% |
| ! | TTCTGTTTCTTAGTGTGAAA+AGG | + | chr4.1:10235468-10235487 | MS.gene57289:intron | 30.0% |
| AATTCTTGCTTGCATATGGT+AGG | - | chr4.1:10234871-10234890 | None:intergenic | 35.0% | |
| ACAATTTGTCATCAGAAGCT+TGG | + | chr4.1:10234964-10234983 | MS.gene57289:CDS | 35.0% | |
| ACAGCTAGTGAAAGTGATAT+GGG | + | chr4.1:10236606-10236625 | MS.gene57289:CDS | 35.0% | |
| ACTCAACAGTCTACAGAAAT+CGG | - | chr4.1:10235772-10235791 | None:intergenic | 35.0% | |
| AGATCCAAATACATGTCACA+AGG | + | chr4.1:10235098-10235117 | MS.gene57289:CDS | 35.0% | |
| AGTTGTTCTCTATAGCAATC+GGG | + | chr4.1:10236212-10236231 | MS.gene57289:CDS | 35.0% | |
| ATCTTGAAGAACACTGACAA+TGG | - | chr4.1:10235935-10235954 | None:intergenic | 35.0% | |
| CACAATGCTTCAATAATTCC+AGG | - | chr4.1:10235012-10235031 | None:intergenic | 35.0% | |
| CATATGGTAGGAAGAAATTC+CGG | - | chr4.1:10234859-10234878 | None:intergenic | 35.0% | |
| CTAGGTGATCATAAAAAGCT+TGG | + | chr4.1:10235904-10235923 | MS.gene57289:CDS | 35.0% | |
| GAAAGTGATATGGGAAATGA+TGG | + | chr4.1:10236615-10236634 | MS.gene57289:CDS | 35.0% | |
| GAACAAATGCAAGGTTACAA+AGG | - | chr4.1:10235129-10235148 | None:intergenic | 35.0% | |
| GAGTTGTTCTCTATAGCAAT+CGG | + | chr4.1:10236211-10236230 | MS.gene57289:CDS | 35.0% | |
| GGAAGATCTACATATTAAGC+AGG | + | chr4.1:10236068-10236087 | MS.gene57289:CDS | 35.0% | |
| GTTAATGAAAATTCACCAGC+TGG | + | chr4.1:10234925-10234944 | MS.gene57289:CDS | 35.0% | |
| GTTCGAAGCAGAGATTAAAA+TGG | + | chr4.1:10236028-10236047 | MS.gene57289:CDS | 35.0% | |
| TAATGATTCAGCTCATGTGT+AGG | + | chr4.1:10235613-10235632 | MS.gene57289:intron | 35.0% | |
| TATATACATATCACACCGCT+TGG | + | chr4.1:10235435-10235454 | MS.gene57289:intron | 35.0% | |
| TCTATGAATTCAGGGTCATT+CGG | - | chr4.1:10234331-10234350 | None:intergenic | 35.0% | |
| TGGTTCCTACACAATGAATA+TGG | + | chr4.1:10234462-10234481 | MS.gene57289:CDS | 35.0% | |
| TTCAGATGATTGGCAGTATA+TGG | + | chr4.1:10235047-10235066 | MS.gene57289:CDS | 35.0% | |
| ! | AAATTGGCTTAGCATGTGAA+TGG | + | chr4.1:10235303-10235322 | MS.gene57289:intron | 35.0% |
| ! | ATGCTTCTTTTGTGTCATGA+AGG | + | chr4.1:10234186-10234205 | MS.gene57289:CDS | 35.0% |
| ! | CAGTCTGTAGCTTTTCATTT+AGG | + | chr4.1:10235392-10235411 | MS.gene57289:intron | 35.0% |
| ! | GATATGGGAAATGATGGAAT+TGG | + | chr4.1:10236621-10236640 | MS.gene57289:CDS | 35.0% |
| ! | TGGCTATTGATTGTCTTCTA+TGG | + | chr4.1:10235067-10235086 | MS.gene57289:CDS | 35.0% |
| AACAAAACTACCTGGCATGT+GGG | + | chr4.1:10234894-10234913 | MS.gene57289:CDS | 40.0% | |
| AACTAATCGCTCAGCGTAAT+CGG | - | chr4.1:10236466-10236485 | None:intergenic | 40.0% | |
| AAGATTGCATCGAGACACAA+GGG | + | chr4.1:10235950-10235969 | MS.gene57289:CDS | 40.0% | |
| AATGCATGTCTGCTCTCATA+TGG | + | chr4.1:10234365-10234384 | MS.gene57289:CDS | 40.0% | |
| ACTGTTGAGTTCTCTTCACT+AGG | + | chr4.1:10235782-10235801 | MS.gene57289:intron | 40.0% | |
| AGAGATCAGGATCATTTGAC+TGG | - | chr4.1:10236422-10236441 | None:intergenic | 40.0% | |
| ATGGGAAAAGAATATGCCCA+AGG | + | chr4.1:10236047-10236066 | MS.gene57289:CDS | 40.0% | |
| ATGTCTGCTCTCATATGGAA+AGG | + | chr4.1:10234370-10234389 | MS.gene57289:CDS | 40.0% | |
| ATTCCCAGCTCTATGAATTC+AGG | - | chr4.1:10234340-10234359 | None:intergenic | 40.0% | |
| ATTGGAATAACGACGATGAC+AGG | + | chr4.1:10236661-10236680 | MS.gene57289:CDS | 40.0% | |
| CAAACATGTGAGTCCAAACA+TGG | - | chr4.1:10235675-10235694 | None:intergenic | 40.0% | |
| CACAAGCTTATGACATGCTA+GGG | + | chr4.1:10236346-10236365 | MS.gene57289:CDS | 40.0% | |
| CAGAAATATGTCACACCAAG+CGG | - | chr4.1:10235453-10235472 | None:intergenic | 40.0% | |
| CATGTTTGGACTCACATGTT+TGG | + | chr4.1:10235673-10235692 | MS.gene57289:intron | 40.0% | |
| CCAAGGAACTCATTGCTAAT+TGG | - | chr4.1:10234666-10234685 | None:intergenic | 40.0% | |
| CCAATTAGCAATGAGTTCCT+TGG | + | chr4.1:10234663-10234682 | MS.gene57289:CDS | 40.0% | |
| CCTCTTAGAAGCTCAACTAA+AGG | - | chr4.1:10234529-10234548 | None:intergenic | 40.0% | |
| CCTTTAGTTGAGCTTCTAAG+AGG | + | chr4.1:10234526-10234545 | MS.gene57289:CDS | 40.0% | |
| CGCCTTGGCATATATTATGT+AGG | + | chr4.1:10235831-10235850 | MS.gene57289:intron | 40.0% | |
| CTGTTGAGTTCTCTTCACTA+GGG | + | chr4.1:10235783-10235802 | MS.gene57289:intron | 40.0% | |
| CTTAATAAGCCAATACCAGC+TGG | - | chr4.1:10234943-10234962 | None:intergenic | 40.0% | |
| CTTAGAAGCTCAACTAAAGG+AGG | - | chr4.1:10234526-10234545 | None:intergenic | 40.0% | |
| GAAAATTCACCAGCTGGTAT+TGG | + | chr4.1:10234931-10234950 | MS.gene57289:CDS | 40.0% | |
| GACAGCTAGTGAAAGTGATA+TGG | + | chr4.1:10236605-10236624 | MS.gene57289:CDS | 40.0% | |
| GAGATCAGGATCATTTGACT+GGG | - | chr4.1:10236421-10236440 | None:intergenic | 40.0% | |
| TAACAAAACTACCTGGCATG+TGG | + | chr4.1:10234893-10234912 | MS.gene57289:CDS | 40.0% | |
| TCGCACTAAAGAACAGATAG+AGG | + | chr4.1:10235996-10236015 | MS.gene57289:CDS | 40.0% | |
| TGACCATCATCATCTTGACA+CGG | - | chr4.1:10234265-10234284 | None:intergenic | 40.0% | |
| TGTAACCTTGCATTTGTTCC+TGG | + | chr4.1:10235130-10235149 | MS.gene57289:intron | 40.0% | |
| TGTTCCAAAGACCACTGATA+GGG | - | chr4.1:10234294-10234313 | None:intergenic | 40.0% | |
| TGTTGAAATGGAGTCTAGGA+AGG | + | chr4.1:10234768-10234787 | MS.gene57289:CDS | 40.0% | |
| TTCCCAGCTCTATGAATTCA+GGG | - | chr4.1:10234339-10234358 | None:intergenic | 40.0% | |
| TTGTCATCAGAAGCTTGGTA+GGG | + | chr4.1:10234969-10234988 | MS.gene57289:CDS | 40.0% | |
| TTTGTCATCAGAAGCTTGGT+AGG | + | chr4.1:10234968-10234987 | MS.gene57289:CDS | 40.0% | |
| ! | GGAAATTCCCTTTTCTCATC+TGG | + | chr4.1:10236117-10236136 | MS.gene57289:CDS | 40.0% |
| ! | TAGTTGAGCTTCTAAGAGGT+AGG | + | chr4.1:10234530-10234549 | MS.gene57289:CDS | 40.0% |
| ! | TCTAAGAGGTAGGTTGACTT+GGG | + | chr4.1:10234540-10234559 | MS.gene57289:CDS | 40.0% |
| ! | TCTTTTGCTGCAACAACCTT+TGG | + | chr4.1:10236245-10236264 | MS.gene57289:CDS | 40.0% |
| ! | TTCTAAGAGGTAGGTTGACT+TGG | + | chr4.1:10234539-10234558 | MS.gene57289:CDS | 40.0% |
| !! | ATGACACAAAAGAAGCATCC+TGG | - | chr4.1:10234184-10234203 | None:intergenic | 40.0% |
| !! | TGACACAAAAGAAGCATCCT+GGG | - | chr4.1:10234183-10234202 | None:intergenic | 40.0% |
| ACAAAACTACCTGGCATGTG+GGG | + | chr4.1:10234895-10234914 | MS.gene57289:CDS | 45.0% | |
| ACTAATCGCTCAGCGTAATC+GGG | - | chr4.1:10236465-10236484 | None:intergenic | 45.0% | |
| AGGGTAGCAGTTAGAGCTTT+GGG | + | chr4.1:10234571-10234590 | MS.gene57289:CDS | 45.0% | |
| ATCGTCATGCCAAAAGTCTC+TGG | + | chr4.1:10236316-10236335 | MS.gene57289:CDS | 45.0% | |
| ATGATCCTGATCTCTCACTG+AGG | + | chr4.1:10236427-10236446 | MS.gene57289:CDS | 45.0% | |
| CAAGATTGCATCGAGACACA+AGG | + | chr4.1:10235949-10235968 | MS.gene57289:CDS | 45.0% | |
| CACTGTGATCTTCTTACACG+CGG | + | chr4.1:10234736-10234755 | MS.gene57289:CDS | 45.0% | |
| CAGAACCAGGAACAAATGCA+AGG | - | chr4.1:10235138-10235157 | None:intergenic | 45.0% | |
| CGGCAATTGCTAACCATGTT+TGG | + | chr4.1:10235659-10235678 | MS.gene57289:intron | 45.0% | |
| CTAGAGTTGTAATCTCCGCA+AGG | - | chr4.1:10235888-10235907 | None:intergenic | 45.0% | |
| CTCTCCTTCTTGGATCTCAT+AGG | - | chr4.1:10236192-10236211 | None:intergenic | 45.0% | |
| CTGTCTTAGGCATGAATGCT+TGG | + | chr4.1:10235222-10235241 | MS.gene57289:intron | 45.0% | |
| CTTCCGTGTCAAGATGATGA+TGG | + | chr4.1:10234259-10234278 | MS.gene57289:CDS | 45.0% | |
| CTTGCGGAGATTACAACTCT+AGG | + | chr4.1:10235886-10235905 | MS.gene57289:CDS | 45.0% | |
| GAAGAGACCAACATTGCAGT+TGG | - | chr4.1:10234810-10234829 | None:intergenic | 45.0% | |
| GACCCTGAATTCATAGAGCT+GGG | + | chr4.1:10234334-10234353 | MS.gene57289:CDS | 45.0% | |
| GAGAACAACTCTCTCCTTCT+TGG | - | chr4.1:10236202-10236221 | None:intergenic | 45.0% | |
| GCACAAGCTTATGACATGCT+AGG | + | chr4.1:10236345-10236364 | MS.gene57289:CDS | 45.0% | |
| GTGTCCTATGAGATCCAAGA+AGG | + | chr4.1:10236185-10236204 | MS.gene57289:CDS | 45.0% | |
| GTGTTCCAAAGACCACTGAT+AGG | - | chr4.1:10234295-10234314 | None:intergenic | 45.0% | |
| TGACCCTGAATTCATAGAGC+TGG | + | chr4.1:10234333-10234352 | MS.gene57289:CDS | 45.0% | |
| TGCTTGGCTTAGCATGTGAA+TGG | + | chr4.1:10235238-10235257 | MS.gene57289:intron | 45.0% | |
| TGTCATCAGAAGCTTGGTAG+GGG | + | chr4.1:10234970-10234989 | MS.gene57289:CDS | 45.0% | |
| TTCTCCCTATCAGTGGTCTT+TGG | + | chr4.1:10234287-10234306 | MS.gene57289:CDS | 45.0% | |
| TTGCTCGCTCTTCAGATGAT+TGG | + | chr4.1:10235037-10235056 | MS.gene57289:CDS | 45.0% | |
| TTTCCCACTTTAGCCAGTCA+CGG | + | chr4.1:10234619-10234638 | MS.gene57289:CDS | 45.0% | |
| ! | AGAGACTGATGACTCGGAAT+GGG | + | chr4.1:10236581-10236600 | MS.gene57289:CDS | 45.0% |
| ! | CTTTTGGCATGACGATTGAC+AGG | - | chr4.1:10236312-10236331 | None:intergenic | 45.0% |
| ! | GGAACTCTACTGACTGTCTT+AGG | + | chr4.1:10235209-10235228 | MS.gene57289:intron | 45.0% |
| ! | GGTGACGGTGGTGATATATA+TGG | + | chr4.1:10236555-10236574 | MS.gene57289:CDS | 45.0% |
| ! | TGCTGCTTGGTTATTTCGAG+AGG | + | chr4.1:10236500-10236519 | MS.gene57289:CDS | 45.0% |
| ! | TTTTGCCTCAGTGAGAGATC+AGG | - | chr4.1:10236435-10236454 | None:intergenic | 45.0% |
| !! | CAAAAGAAGCATCCTGGGTA+TGG | - | chr4.1:10234178-10234197 | None:intergenic | 45.0% |
| !! | GTGTCAAGATGATGATGGTC+AGG | + | chr4.1:10234264-10234283 | MS.gene57289:CDS | 45.0% |
| !! | TGGTCTTTGGAACACAGCAA+TGG | + | chr4.1:10234300-10234319 | MS.gene57289:CDS | 45.0% |
| AAGGACTGAAGAATCGACGC+TGG | + | chr4.1:10234389-10234408 | MS.gene57289:CDS | 50.0% | |
| ACACTTGCTCTGCGTTTGCT+TGG | - | chr4.1:10234220-10234239 | None:intergenic | 50.0% | |
| ATTCCAGGGCAACTAGCAAC+AGG | - | chr4.1:10234997-10235016 | None:intergenic | 50.0% | |
| CAGTCTACAGAAATCGGTGC+TGG | - | chr4.1:10235766-10235785 | None:intergenic | 50.0% | |
| CATGACGATTGACAGGTCTG+TGG | - | chr4.1:10236305-10236324 | None:intergenic | 50.0% | |
| CATTCCGAGTCATCAGTCTC+TGG | - | chr4.1:10236582-10236601 | None:intergenic | 50.0% | |
| CCAGTTGAAGTAGCAGAACC+AGG | - | chr4.1:10235151-10235170 | None:intergenic | 50.0% | |
| CTCGAGAATTTCACCGTGAC+TGG | - | chr4.1:10234635-10234654 | None:intergenic | 50.0% | |
| GAGGGTAGCAGTTAGAGCTT+TGG | + | chr4.1:10234570-10234589 | MS.gene57289:CDS | 50.0% | |
| GATCTTCTTACACGCGGCAT+GGG | + | chr4.1:10234742-10234761 | MS.gene57289:CDS | 50.0% | |
| GCAGAAAGTTCTGTGCATGC+TGG | + | chr4.1:10234493-10234512 | MS.gene57289:CDS | 50.0% | |
| GCATCACTTATGGCAGCCAA+AGG | - | chr4.1:10236264-10236283 | None:intergenic | 50.0% | |
| GCCTGCATTAGTTGACCTTG+CGG | + | chr4.1:10235870-10235889 | MS.gene57289:CDS | 50.0% | |
| GTCATGCCAAAAGTCTCTGG+AGG | + | chr4.1:10236319-10236338 | MS.gene57289:CDS | 50.0% | |
| GTCTGTGGAGACATAGTGCA+CGG | - | chr4.1:10236290-10236309 | None:intergenic | 50.0% | |
| TATTAAGCAGGCTGCAGCAC+TGG | + | chr4.1:10236080-10236099 | MS.gene57289:CDS | 50.0% | |
| TCCGCAAGGTCAACTAATGC+AGG | - | chr4.1:10235874-10235893 | None:intergenic | 50.0% | |
| TCTGTGGAGACATAGTGCAC+GGG | - | chr4.1:10236289-10236308 | None:intergenic | 50.0% | |
| TGATCTTCTTACACGCGGCA+TGG | + | chr4.1:10234741-10234760 | MS.gene57289:CDS | 50.0% | |
| TGCACGGGTAGCATCACTTA+TGG | - | chr4.1:10236274-10236293 | None:intergenic | 50.0% | |
| TGGTCCAGAGACTGATGACT+CGG | + | chr4.1:10236575-10236594 | MS.gene57289:CDS | 50.0% | |
| TTGCATCGAGACACAAGGGT+CGG | + | chr4.1:10235954-10235973 | MS.gene57289:CDS | 50.0% | |
| ! | CAGAGACTGATGACTCGGAA+TGG | + | chr4.1:10236580-10236599 | MS.gene57289:CDS | 50.0% |
| ! | CATGGTGGCGTCCATAATCA+GGG | + | chr4.1:10236534-10236553 | MS.gene57289:CDS | 50.0% |
| ! | GCGGTGTTGAAATGGAGTCT+AGG | + | chr4.1:10234764-10234783 | MS.gene57289:CDS | 50.0% |
| ! | GGAATTGGCGATGATGACGA+CGG | + | chr4.1:10236636-10236655 | MS.gene57289:CDS | 50.0% |
| ! | GGCTAAAGTGGGAAAAGTGC+TGG | - | chr4.1:10234614-10234633 | None:intergenic | 50.0% |
| ! | TCACCGTGACTGGCTAAAGT+GGG | - | chr4.1:10234625-10234644 | None:intergenic | 50.0% |
| ! | TTCACCGTGACTGGCTAAAG+TGG | - | chr4.1:10234626-10234645 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGCTACTTCAAC+TGG | + | chr4.1:10235148-10235167 | MS.gene57289:intron | 50.0% |
| !! | GCACTGGTTGTCAAGCTTGA+AGG | + | chr4.1:10236096-10236115 | MS.gene57289:CDS | 50.0% |
| !! | GTTGACTTGGGTTGAGCAGA+GGG | + | chr4.1:10234552-10234571 | MS.gene57289:CDS | 50.0% |
| AAACTACCTGGCATGTGGGG+TGG | + | chr4.1:10234898-10234917 | MS.gene57289:CDS | 55.0% | |
| AATGGAGTCTAGGAAGGCCG+AGG | + | chr4.1:10234774-10234793 | MS.gene57289:CDS | 55.0% | |
| AGTCTAGGAAGGCCGAGGAA+TGG | + | chr4.1:10234779-10234798 | MS.gene57289:CDS | 55.0% | |
| CACCACCGTCACCCTGATTA+TGG | - | chr4.1:10236548-10236567 | None:intergenic | 55.0% | |
| CGAGAGGCAGCTGTTAAGCA+TGG | + | chr4.1:10236516-10236535 | MS.gene57289:CDS | 55.0% | |
| GAGGCAGCTGTTAAGCATGG+TGG | + | chr4.1:10236519-10236538 | MS.gene57289:CDS | 55.0% | |
| GGCGTCCATAATCAGGGTGA+CGG | + | chr4.1:10236540-10236559 | MS.gene57289:CDS | 55.0% | |
| GGTCAGGTTCTCCCTATCAG+TGG | + | chr4.1:10234280-10234299 | MS.gene57289:CDS | 55.0% | |
| GTCTAGGAAGGCCGAGGAAT+GGG | + | chr4.1:10234780-10234799 | MS.gene57289:CDS | 55.0% | |
| TCATCGGACTGTCCATACCC+AGG | + | chr4.1:10234163-10234182 | MS.gene57289:CDS | 55.0% | |
| TGCATCGAGACACAAGGGTC+GGG | + | chr4.1:10235955-10235974 | MS.gene57289:CDS | 55.0% | |
| ! | AGAAGCAGATGCGTGCTGCT+TGG | + | chr4.1:10236487-10236506 | MS.gene57289:CDS | 55.0% |
| ! | CAGTTGGCTAGCCCATTCCT+CGG | - | chr4.1:10234794-10234813 | None:intergenic | 55.0% |
| ! | GCATGGTGGCGTCCATAATC+AGG | + | chr4.1:10236533-10236552 | MS.gene57289:CDS | 55.0% |
| ! | GCGATGATGACGACGGTGAT+TGG | + | chr4.1:10236643-10236662 | MS.gene57289:CDS | 55.0% |
| ! | GTCCATAATCAGGGTGACGG+TGG | + | chr4.1:10236543-10236562 | MS.gene57289:CDS | 55.0% |
| ! | TGCTCGCCTCCAGAGACTTT+TGG | - | chr4.1:10236328-10236347 | None:intergenic | 55.0% |
| !! | GGGCTAGCCAACTGCAATGT+TGG | + | chr4.1:10234800-10234819 | MS.gene57289:CDS | 55.0% |
| !! | GGTTGACTTGGGTTGAGCAG+AGG | + | chr4.1:10234551-10234570 | MS.gene57289:CDS | 55.0% |
| ACAAGACCACCCCACATGCC+AGG | - | chr4.1:10234907-10234926 | None:intergenic | 60.0% | |
| CTTCTTACACGCGGCATGGG+CGG | + | chr4.1:10234745-10234764 | MS.gene57289:CDS | 60.0% | |
| GGACCTGTTGCTAGTTGCCC+TGG | + | chr4.1:10234991-10235010 | MS.gene57289:CDS | 60.0% | |
| ! | CGGCATGGGCGGTGTTGAAA+TGG | + | chr4.1:10234756-10234775 | MS.gene57289:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 10234151 | 10236692 | 10234151 | ID=MS.gene57289 |
| chr4.1 | mRNA | 10234151 | 10236692 | 10234151 | ID=MS.gene57289.t1;Parent=MS.gene57289 |
| chr4.1 | exon | 10234151 | 10235119 | 10234151 | ID=MS.gene57289.t1.exon1;Parent=MS.gene57289.t1 |
| chr4.1 | CDS | 10234151 | 10235119 | 10234151 | ID=cds.MS.gene57289.t1;Parent=MS.gene57289.t1 |
| chr4.1 | exon | 10235853 | 10236692 | 10235853 | ID=MS.gene57289.t1.exon2;Parent=MS.gene57289.t1 |
| chr4.1 | CDS | 10235853 | 10236692 | 10235853 | ID=cds.MS.gene57289.t1;Parent=MS.gene57289.t1 |
| Gene Sequence |
| Protein sequence |
