Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57710.t1 | RHN64084.1 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.00E+00 | 1302.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57710.t1 | Q9FYQ8 | 84.5 | 658 | 100 | 2 | 1 | 656 | 1 | 658 | 0.0e+00 | 1136.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57710.t1 | A0A396IID5 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0e+00 | 1302.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050818 | MS.gene57710 | 0.803294 | 3.73E-49 | -1.69E-46 |
MS.gene057195 | MS.gene57710 | 0.852472 | 4.51E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36542 | MS.gene57710 | PPI |
MS.gene014910 | MS.gene57710 | PPI |
MS.gene33117 | MS.gene57710 | PPI |
MS.gene058486 | MS.gene57710 | PPI |
MS.gene57710 | MS.gene42664 | PPI |
MS.gene80184 | MS.gene57710 | PPI |
MS.gene32702 | MS.gene57710 | PPI |
MS.gene57710 | MS.gene80181 | PPI |
MS.gene57710 | MS.gene36992 | PPI |
MS.gene57710 | MS.gene020254 | PPI |
MS.gene36990 | MS.gene57710 | PPI |
MS.gene051485 | MS.gene57710 | PPI |
MS.gene016086 | MS.gene57710 | PPI |
MS.gene011190 | MS.gene57710 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57710.t1 | MTR_0204s0010 | 100.000 | 448 | 0 | 0 | 209 | 656 | 1 | 448 | 0.0 | 905 |
MS.gene57710.t1 | MTR_3g082140 | 67.530 | 656 | 201 | 7 | 7 | 656 | 10 | 659 | 0.0 | 882 |
MS.gene57710.t1 | MTR_5g098730 | 67.085 | 638 | 201 | 7 | 23 | 656 | 33 | 665 | 0.0 | 872 |
MS.gene57710.t1 | MTR_8g016270 | 44.228 | 667 | 313 | 12 | 10 | 656 | 21 | 648 | 0.0 | 560 |
MS.gene57710.t1 | MTR_1g014080 | 43.891 | 663 | 314 | 12 | 14 | 656 | 13 | 637 | 0.0 | 543 |
MS.gene57710.t1 | MTR_3g105950 | 44.697 | 660 | 302 | 13 | 19 | 656 | 18 | 636 | 0.0 | 543 |
MS.gene57710.t1 | MTR_4g116770 | 92.754 | 207 | 13 | 1 | 1 | 207 | 1 | 205 | 3.04e-130 | 400 |
MS.gene57710.t1 | MTR_5g077170 | 27.673 | 636 | 378 | 16 | 32 | 656 | 27 | 591 | 5.67e-79 | 262 |
MS.gene57710.t1 | MTR_6g074910 | 27.969 | 640 | 375 | 17 | 29 | 656 | 23 | 588 | 5.58e-78 | 259 |
MS.gene57710.t1 | MTR_4g053270 | 28.527 | 638 | 366 | 15 | 32 | 656 | 29 | 589 | 2.93e-71 | 242 |
MS.gene57710.t1 | MTR_8g088730 | 36.905 | 420 | 247 | 9 | 247 | 656 | 178 | 589 | 1.18e-66 | 229 |
MS.gene57710.t1 | MTR_2g006300 | 36.930 | 417 | 245 | 9 | 250 | 656 | 175 | 583 | 2.97e-63 | 220 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57710.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene57710.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene57710.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
MS.gene57710.t1 | AT5G35160 | 81.763 | 658 | 90 | 3 | 1 | 656 | 1 | 630 | 0.0 | 1083 |
MS.gene57710.t1 | AT4G12650 | 67.593 | 648 | 199 | 6 | 14 | 656 | 11 | 652 | 0.0 | 862 |
MS.gene57710.t1 | AT3G13772 | 44.495 | 654 | 304 | 13 | 23 | 656 | 27 | 641 | 0.0 | 555 |
MS.gene57710.t1 | AT5G10840 | 43.797 | 669 | 312 | 13 | 13 | 656 | 19 | 648 | 0.0 | 546 |
MS.gene57710.t1 | AT5G25100 | 43.498 | 669 | 310 | 13 | 14 | 656 | 18 | 644 | 0.0 | 542 |
MS.gene57710.t1 | AT2G24170 | 44.122 | 655 | 307 | 12 | 22 | 656 | 22 | 637 | 0.0 | 540 |
MS.gene57710.t1 | AT5G25100 | 43.343 | 676 | 308 | 14 | 14 | 656 | 18 | 651 | 0.0 | 540 |
MS.gene57710.t1 | AT1G55130 | 42.511 | 661 | 321 | 12 | 16 | 656 | 16 | 637 | 0.0 | 538 |
MS.gene57710.t1 | AT2G24170 | 42.140 | 458 | 211 | 9 | 22 | 462 | 22 | 442 | 5.20e-120 | 365 |
MS.gene57710.t1 | AT2G01970 | 27.889 | 649 | 383 | 16 | 20 | 656 | 17 | 592 | 3.06e-84 | 276 |
MS.gene57710.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
MS.gene57710.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
MS.gene57710.t1 | AT1G14670 | 28.947 | 646 | 380 | 16 | 20 | 656 | 17 | 592 | 3.11e-80 | 266 |
MS.gene57710.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
MS.gene57710.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
MS.gene57710.t1 | AT1G08350 | 28.351 | 582 | 329 | 15 | 88 | 656 | 2 | 508 | 1.38e-67 | 230 |
MS.gene57710.t1 | AT1G08350 | 28.881 | 599 | 324 | 19 | 14 | 598 | 13 | 523 | 3.67e-67 | 229 |
MS.gene57710.t1 | AT1G10950 | 36.691 | 417 | 246 | 9 | 250 | 656 | 181 | 589 | 9.14e-65 | 224 |
Find 183 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGGTCTCCTCATATTTA+TGG | 0.158373 | 8.3:+9314536 | None:intergenic |
ATCAAATACAAGATAGTTTA+TGG | 0.166753 | 8.3:+9313265 | None:intergenic |
CAATCTTGAACTTCCTATTA+TGG | 0.180368 | 8.3:-9313730 | MS.gene57710:CDS |
TTGGGTTCCTCTCTTCATTC+TGG | 0.207220 | 8.3:-9313151 | MS.gene57710:CDS |
GAGGAATTTCTCTAGGAATT+TGG | 0.209657 | 8.3:+9313564 | None:intergenic |
CCCTGTTGGTATTAAGATTC+AGG | 0.247344 | 8.3:-9314602 | MS.gene57710:CDS |
TCCTTCTTTGTTGTGTATAA+TGG | 0.248630 | 8.3:-9314005 | MS.gene57710:CDS |
TTCTCAGATCCTTCCTTAAC+AGG | 0.259590 | 8.3:+9314469 | None:intergenic |
GGATCGAGAATTCGCCTTAT+AGG | 0.263740 | 8.3:-9314807 | MS.gene57710:CDS |
ATGGTGATCACTTTCCTTGC+TGG | 0.283624 | 8.3:-9314172 | MS.gene57710:CDS |
GGTGATGGAGTTCAGATTCT+TGG | 0.295289 | 8.3:-9313980 | MS.gene57710:CDS |
ATTTGTTTGGTGTTTCAATC+AGG | 0.295668 | 8.3:-9315021 | MS.gene57710:CDS |
AGCGGCTGGCCTTCTTTAAT+AGG | 0.301449 | 8.3:+9314313 | None:intergenic |
AATATAACAAAGAGAGAAAA+TGG | 0.302358 | 8.3:+9313683 | None:intergenic |
TCTTTATCATGTCCAGCATT+TGG | 0.304826 | 8.3:-9313466 | MS.gene57710:CDS |
GACCAATGTGGCTCGTGTTA+TGG | 0.324827 | 8.3:-9314521 | MS.gene57710:CDS |
GGTAAACTATAATAACTAAA+TGG | 0.337219 | 8.3:+9314898 | None:intergenic |
GGAATTTGGTTGGTTCTAAC+AGG | 0.337867 | 8.3:+9313578 | None:intergenic |
TACTTTGGCTTCCCCATAAT+AGG | 0.338322 | 8.3:+9313717 | None:intergenic |
AATCTTGAACTTCCTATTAT+GGG | 0.344499 | 8.3:-9313729 | MS.gene57710:CDS |
TGTTTCTGCAACTCTGTACT+TGG | 0.345457 | 8.3:-9313222 | MS.gene57710:CDS |
CTGGGTCATGGCTATTTGTT+TGG | 0.351997 | 8.3:-9315034 | MS.gene57710:CDS |
TTGTTATATTGCTATTGCTT+TGG | 0.352574 | 8.3:-9313670 | MS.gene57710:CDS |
TTATCTTCTTGAGAACTGTT+AGG | 0.357759 | 8.3:-9314138 | MS.gene57710:CDS |
GTAAACATCTTAAACCTATA+AGG | 0.359924 | 8.3:+9314793 | None:intergenic |
GGGTATGGTTTCTACCTTCC+GGG | 0.364387 | 8.3:-9315000 | MS.gene57710:CDS |
ACCAATGTGGCTCGTGTTAT+GGG | 0.372249 | 8.3:-9314520 | MS.gene57710:CDS |
CACAACAAAGAAGGATTTGA+TGG | 0.373080 | 8.3:+9314013 | None:intergenic |
GGTGCTGGCACCCTTCCCTT+TGG | 0.373371 | 8.3:-9313509 | MS.gene57710:CDS |
TCCTGAATCTTAATACCAAC+AGG | 0.375336 | 8.3:+9314601 | None:intergenic |
CTTATCAAGCTCCTCATAAC+TGG | 0.375567 | 8.3:+9314105 | None:intergenic |
CTCGATCCTCAATTCGTTGA+TGG | 0.377219 | 8.3:-9314191 | MS.gene57710:CDS |
ACACTTGTTGGTGGCTACTT+TGG | 0.378171 | 8.3:-9313626 | MS.gene57710:CDS |
GTCGATGGATCACATTTAAT+AGG | 0.380805 | 8.3:+9314346 | None:intergenic |
CTTGGGATACTCACTCTTCA+TGG | 0.381798 | 8.3:-9313204 | MS.gene57710:CDS |
TCTGTCCCACTTACACTTGT+TGG | 0.386331 | 8.3:-9313638 | MS.gene57710:CDS |
TGGAAATCATTCTTTGCCTC+TGG | 0.395692 | 8.3:-9313317 | MS.gene57710:CDS |
GTGATGGAGTTCAGATTCTT+GGG | 0.403271 | 8.3:-9313979 | MS.gene57710:CDS |
TATCATGTCCAGCATTTGGA+TGG | 0.407267 | 8.3:-9313462 | MS.gene57710:CDS |
TACCCACACAATTATGCAAT+TGG | 0.410515 | 8.3:-9314973 | MS.gene57710:CDS |
GTACATGGTTGTTGGGTTTG+AGG | 0.411511 | 8.3:-9314440 | MS.gene57710:CDS |
TAAAGAACAGCTCAATGAAA+AGG | 0.422226 | 8.3:+9313483 | None:intergenic |
TGGTTGGAAGCTTGTGGTGG+GGG | 0.425246 | 8.3:-9314050 | MS.gene57710:CDS |
AAGCCGGGGTACATGGTTGT+TGG | 0.426097 | 8.3:-9314448 | MS.gene57710:CDS |
GTGCGGCGATCAGAAGGGTT+GGG | 0.426321 | 8.3:-9313810 | MS.gene57710:CDS |
AGCCGGGGTACATGGTTGTT+GGG | 0.426832 | 8.3:-9314447 | MS.gene57710:CDS |
ATATCAAGTGGCCATCTAGA+TGG | 0.430148 | 8.3:-9314255 | MS.gene57710:CDS |
TCTGGTTGGAAGCTTGTGGT+GGG | 0.432889 | 8.3:-9314052 | MS.gene57710:CDS |
AAGTACAGAGTTGCAGAAAC+AGG | 0.445695 | 8.3:+9313224 | None:intergenic |
CAGATGAATGAGGAGTTATC+TGG | 0.450439 | 8.3:-9314070 | MS.gene57710:CDS |
ATCTGGTTGGAAGCTTGTGG+TGG | 0.453164 | 8.3:-9314053 | MS.gene57710:CDS |
ACAATATTGTTTGCTGCACT+TGG | 0.457516 | 8.3:-9313944 | MS.gene57710:CDS |
ATGGAATGGCTCCTGTACTT+TGG | 0.461027 | 8.3:+9313702 | None:intergenic |
TTGGTGTTTCAATCAGGGTA+TGG | 0.463389 | 8.3:-9315015 | MS.gene57710:CDS |
TGCACCTCTGTGTGGAGGAT+TGG | 0.467543 | 8.3:-9313349 | MS.gene57710:CDS |
TCTTCTGTGAAGTTGGATTG+AGG | 0.467795 | 8.3:-9313110 | None:intergenic |
ATCTGAGAAGCCGGGGTACA+TGG | 0.468660 | 8.3:-9314455 | MS.gene57710:CDS |
AGGGTATGGTTTCTACCTTC+CGG | 0.473489 | 8.3:-9315001 | MS.gene57710:CDS |
GAGGGATCTGGCCAGTTATG+AGG | 0.477456 | 8.3:-9314116 | MS.gene57710:CDS |
GAGGATGAAGAAGGCAATAC+CGG | 0.480232 | 8.3:+9313754 | None:intergenic |
TGTTCTTGTCCATAAATATG+AGG | 0.481033 | 8.3:-9314545 | MS.gene57710:CDS |
AGGGTTGGGTTTCAGTTGCA+TGG | 0.484208 | 8.3:-9313796 | MS.gene57710:CDS |
AAGTAAGCATCCCATCTAGA+TGG | 0.484918 | 8.3:+9314244 | None:intergenic |
CGTGCGGCGATCAGAAGGGT+TGG | 0.485992 | 8.3:-9313811 | MS.gene57710:CDS |
AAGGATAGTGCTGAGAATCT+AGG | 0.486339 | 8.3:-9314850 | MS.gene57710:CDS |
GTCCCACTTACACTTGTTGG+TGG | 0.488890 | 8.3:-9313635 | MS.gene57710:CDS |
TTTGTTTGGTGTTTCAATCA+GGG | 0.489983 | 8.3:-9315020 | MS.gene57710:CDS |
CAAATTCAAATTCTGGGTCA+TGG | 0.490284 | 8.3:-9315046 | MS.gene57710:CDS |
TTGTGTATAATGGTTGGTGA+TGG | 0.492346 | 8.3:-9313995 | MS.gene57710:CDS |
ACTCGCGTGCGGCGATCAGA+AGG | 0.493442 | 8.3:-9313816 | MS.gene57710:CDS |
TACCTACGAGGTAACGTTTG+AGG | 0.495432 | 8.3:-9314284 | MS.gene57710:CDS |
ATGGGATGCTTACTTGAAGA+TGG | 0.497074 | 8.3:-9314236 | MS.gene57710:CDS |
CAGTTATGAGGAGCTTGATA+AGG | 0.497655 | 8.3:-9314104 | MS.gene57710:CDS |
ATGATACTTGGTATTGCTGC+TGG | 0.498593 | 8.3:-9313866 | MS.gene57710:CDS |
CTCAATGAAAAGGGTTCCAA+AGG | 0.503492 | 8.3:+9313493 | None:intergenic |
GATCGAGAACCAATGGACTT+TGG | 0.504056 | 8.3:+9314207 | None:intergenic |
CGTAGGTAAACGCAAGCGGC+TGG | 0.506527 | 8.3:+9314299 | None:intergenic |
TGTTGGTGACAGGCACAGTT+GGG | 0.507832 | 8.3:-9313169 | MS.gene57710:CDS |
AAAGCTGCTTGTTTCTTCCC+CGG | 0.509099 | 8.3:-9313773 | MS.gene57710:CDS |
TGCAATTGGTGATGAATTGT+CGG | 0.510847 | 8.3:-9314959 | MS.gene57710:CDS |
TGGAGGATTGGAGATGGTGG+TGG | 0.512530 | 8.3:-9313337 | MS.gene57710:CDS |
CAAGAACATTAAATCTAAGA+TGG | 0.515293 | 8.3:+9314560 | None:intergenic |
CTAGCAATCATGTTGGTGAC+AGG | 0.515495 | 8.3:-9313179 | MS.gene57710:CDS |
GAGAACTGTTAGGAGGGATC+TGG | 0.516130 | 8.3:-9314128 | MS.gene57710:CDS |
GAATCTAGGTGAGCTTCTCA+TGG | 0.516684 | 8.3:-9314836 | MS.gene57710:CDS |
AAAGAACAGCTCAATGAAAA+GGG | 0.520078 | 8.3:+9313484 | None:intergenic |
TCTTGTGGTGGTTTGTGCTG+AGG | 0.521715 | 8.3:-9313393 | MS.gene57710:CDS |
TAGCCACCAACAAGTGTAAG+TGG | 0.522399 | 8.3:+9313632 | None:intergenic |
GTGGCTCGTGTTATGGGAAC+CGG | 0.523916 | 8.3:-9314514 | MS.gene57710:CDS |
ACCTGTGATAAGTGTTCCAC+GGG | 0.526211 | 8.3:+9313904 | None:intergenic |
TGATCACCATCAACGAATTG+AGG | 0.527193 | 8.3:+9314185 | None:intergenic |
AACACGGCCCATCCAAATGC+TGG | 0.527959 | 8.3:+9313454 | None:intergenic |
TTCATGTCACCGGCCTCCCG+TGG | 0.527959 | 8.3:-9313920 | MS.gene57710:CDS |
AAGGAAGGATCTGAGAAGCC+GGG | 0.528711 | 8.3:-9314463 | MS.gene57710:CDS |
AATTTCTCTAGGAATTTGGT+TGG | 0.529324 | 8.3:+9313568 | None:intergenic |
ATAAGTGTTCCACGGGAGGC+CGG | 0.530499 | 8.3:+9313911 | None:intergenic |
ACCATTATACACAACAAAGA+AGG | 0.534847 | 8.3:+9314004 | None:intergenic |
CTGGTTGGAAGCTTGTGGTG+GGG | 0.535511 | 8.3:-9314051 | MS.gene57710:CDS |
AATCATCTCAGCCGCATCAC+CGG | 0.536909 | 8.3:+9314495 | None:intergenic |
TCTTTGTTGTGTATAATGGT+TGG | 0.537010 | 8.3:-9314001 | MS.gene57710:CDS |
TCACCAATTGCATAATTGTG+TGG | 0.538717 | 8.3:+9314970 | None:intergenic |
CTTCTTGAGAACTGTTAGGA+GGG | 0.539675 | 8.3:-9314134 | MS.gene57710:CDS |
ATAGGCATTGCCACAGTCGA+TGG | 0.540885 | 8.3:+9314331 | None:intergenic |
CGCTGCTGAGGAATTTCTCT+AGG | 0.541640 | 8.3:+9313557 | None:intergenic |
TAAGGAAGGATCTGAGAAGC+CGG | 0.543364 | 8.3:-9314464 | MS.gene57710:CDS |
TCTTCTTGAGAACTGTTAGG+AGG | 0.545064 | 8.3:-9314135 | MS.gene57710:CDS |
AGGATGAAGAAGGCAATACC+GGG | 0.546046 | 8.3:+9313755 | None:intergenic |
ATCATGTCCAGCATTTGGAT+GGG | 0.548416 | 8.3:-9313461 | MS.gene57710:CDS |
TATCAAGTGGCCATCTAGAT+GGG | 0.549497 | 8.3:-9314254 | MS.gene57710:CDS |
GGATCACATTTAATAGGTGA+CGG | 0.552812 | 8.3:+9314352 | None:intergenic |
TGGTGGCTACTTTGGAGCAA+AGG | 0.554397 | 8.3:-9313618 | MS.gene57710:CDS |
ATGTTGGTGACAGGCACAGT+TGG | 0.557996 | 8.3:-9313170 | MS.gene57710:CDS |
AATCTAGGTGAGCTTCTCAT+GGG | 0.557996 | 8.3:-9314835 | MS.gene57710:CDS |
GGATGCTTACTTGAAGATGG+AGG | 0.561604 | 8.3:-9314233 | MS.gene57710:CDS |
TTCTTCGTAAAACGAATAGC+AGG | 0.562872 | 8.3:+9314655 | None:intergenic |
TGGAGGGAGCCAAAGTCCAT+TGG | 0.566645 | 8.3:-9314216 | MS.gene57710:CDS |
TGAAAAGGGTTCCAAAGGGA+AGG | 0.570056 | 8.3:+9313498 | None:intergenic |
CACCAATTGCATAATTGTGT+GGG | 0.570143 | 8.3:+9314971 | None:intergenic |
TCTCAGATCCTTCCTTAACA+GGG | 0.572609 | 8.3:+9314470 | None:intergenic |
TGGAGTTCAGATTCTTGGGA+TGG | 0.573301 | 8.3:-9313975 | MS.gene57710:CDS |
GTGGCAATGCCTATTAAAGA+AGG | 0.576450 | 8.3:-9314322 | MS.gene57710:CDS |
GATCACATTTAATAGGTGAC+GGG | 0.577005 | 8.3:+9314353 | None:intergenic |
GTGTGGAGGATTGGAGATGG+TGG | 0.579374 | 8.3:-9313340 | MS.gene57710:CDS |
CAAGATTGTGAGGATGAAGA+AGG | 0.582999 | 8.3:+9313745 | None:intergenic |
GATGTTTACTAATGAGTCTG+AGG | 0.583355 | 8.3:-9314779 | MS.gene57710:CDS |
GTTATCTGGTTGGAAGCTTG+TGG | 0.588427 | 8.3:-9314056 | MS.gene57710:CDS |
TCCCATAACACGAGCCACAT+TGG | 0.588765 | 8.3:+9314519 | None:intergenic |
TGCACTTGGATTCATGTCAC+CGG | 0.589020 | 8.3:-9313930 | MS.gene57710:CDS |
GTTTCTGCAACTCTGTACTT+GGG | 0.589552 | 8.3:-9313221 | MS.gene57710:CDS |
AGATGGACTGGGTACCCTGT+TGG | 0.591209 | 8.3:-9314616 | MS.gene57710:CDS |
ATCTTGAACTTCCTATTATG+GGG | 0.592990 | 8.3:-9313728 | MS.gene57710:CDS |
TTATGGGGAAGCCAAAGTAC+AGG | 0.594384 | 8.3:-9313713 | MS.gene57710:CDS |
AATTGAGGATCGAGAACCAA+TGG | 0.597715 | 8.3:+9314200 | None:intergenic |
GTTATGTTTCAGTTCGACTG+TGG | 0.597723 | 8.3:-9313844 | MS.gene57710:CDS |
TCCCGTGGAACACTTATCAC+AGG | 0.598031 | 8.3:-9313905 | MS.gene57710:CDS |
CTCGCGTGCGGCGATCAGAA+GGG | 0.598186 | 8.3:-9313815 | MS.gene57710:CDS |
CATGGTTCTAGCAATCATGT+TGG | 0.600699 | 8.3:-9313186 | MS.gene57710:CDS |
AAGAAGGATTTGATGGAGCA+CGG | 0.601804 | 8.3:+9314020 | None:intergenic |
TACCTGTGATAAGTGTTCCA+CGG | 0.602595 | 8.3:+9313903 | None:intergenic |
TCAATGAAAAGGGTTCCAAA+GGG | 0.608377 | 8.3:+9313494 | None:intergenic |
TAATTGTGTGGGTAACTACC+CGG | 0.608773 | 8.3:+9314982 | None:intergenic |
AACAAAGAGAGAAAATGGAA+TGG | 0.610331 | 8.3:+9313688 | None:intergenic |
AGCTCAAGCACAGATGAATG+AGG | 0.617907 | 8.3:-9314080 | MS.gene57710:CDS |
CTCAGATCCTTCCTTAACAG+GGG | 0.621573 | 8.3:+9314471 | None:intergenic |
ATCTAGGTGAGCTTCTCATG+GGG | 0.627364 | 8.3:-9314834 | MS.gene57710:CDS |
TCTGTGTGGAGGATTGGAGA+TGG | 0.630692 | 8.3:-9313343 | MS.gene57710:CDS |
CACGACGGATACCGCTGCTG+AGG | 0.631043 | 8.3:+9313545 | None:intergenic |
GATGCTTACTTGAAGATGGA+GGG | 0.631078 | 8.3:-9314232 | MS.gene57710:CDS |
GAAAAGGGTTCCAAAGGGAA+GGG | 0.631885 | 8.3:+9313499 | None:intergenic |
TGAATGAGGAGTTATCTGGT+TGG | 0.637187 | 8.3:-9314066 | MS.gene57710:CDS |
TCAGATCCTTCCTTAACAGG+GGG | 0.637373 | 8.3:+9314472 | None:intergenic |
TGTGATAAGTGTTCCACGGG+AGG | 0.637733 | 8.3:+9313907 | None:intergenic |
TGGTTCTAACAGGATACTCA+AGG | 0.638465 | 8.3:+9313588 | None:intergenic |
CTCAGCAGCGGTATCCGTCG+TGG | 0.639819 | 8.3:-9313544 | MS.gene57710:CDS |
ACCCGAAAACATAGTAAACA+CGG | 0.641523 | 8.3:+9313438 | None:intergenic |
TTGAGGAGAGTGATATCAAG+TGG | 0.642653 | 8.3:-9314267 | MS.gene57710:CDS |
GCATTATGCATAATACTACA+AGG | 0.643881 | 8.3:+9314412 | None:intergenic |
ATAGGAAGTTCAAGATTGTG+AGG | 0.645085 | 8.3:+9313735 | None:intergenic |
AACCCAACAACCATGTACCC+CGG | 0.645248 | 8.3:+9314445 | None:intergenic |
CTAGAGAAATTCCTCAGCAG+CGG | 0.650903 | 8.3:-9313556 | MS.gene57710:CDS |
TTACATGCACCTCTGTGTGG+AGG | 0.651300 | 8.3:-9313354 | MS.gene57710:CDS |
AACTTACATGCACCTCTGTG+TGG | 0.652266 | 8.3:-9313357 | MS.gene57710:CDS |
CTCCTCAAACGTTACCTCGT+AGG | 0.655284 | 8.3:+9314282 | None:intergenic |
AGGAAGGATCTGAGAAGCCG+GGG | 0.657385 | 8.3:-9314462 | MS.gene57710:CDS |
AGCCACCAACAAGTGTAAGT+GGG | 0.658396 | 8.3:+9313633 | None:intergenic |
ACCTCGTAGGTAAACGCAAG+CGG | 0.659065 | 8.3:+9314295 | None:intergenic |
TGGTGATGAATTGTCGGTGA+AGG | 0.659099 | 8.3:-9314953 | MS.gene57710:CDS |
GCCGCTTGCGTTTACCTACG+AGG | 0.660211 | 8.3:-9314296 | MS.gene57710:CDS |
ACACGAACCAGAATGAAGAG+AGG | 0.661550 | 8.3:+9313144 | None:intergenic |
TGTTATGGGAACCGGTGATG+CGG | 0.663081 | 8.3:-9314506 | MS.gene57710:CDS |
TAACAAGAACAATACCAGCA+AGG | 0.672966 | 8.3:+9314158 | None:intergenic |
CTAACAGGATACTCAAGGTG+AGG | 0.675817 | 8.3:+9313593 | None:intergenic |
TTTGATCTCAAGAATCTGAG+TGG | 0.676176 | 8.3:-9313248 | MS.gene57710:CDS |
CTGTGGAGAACACTCGCGTG+CGG | 0.676822 | 8.3:-9313827 | MS.gene57710:CDS |
CCTGAATCTTAATACCAACA+GGG | 0.677762 | 8.3:+9314602 | None:intergenic |
GTACAGTGCAACAGAACCAG+AGG | 0.685889 | 8.3:+9313301 | None:intergenic |
TAAATGTGATCCATCGACTG+TGG | 0.688100 | 8.3:-9314341 | MS.gene57710:CDS |
CCTAGAACTAAAAGCCACGA+CGG | 0.690997 | 8.3:+9313530 | None:intergenic |
TGTGTGGGTAACTACCCGGA+AGG | 0.693942 | 8.3:+9314986 | None:intergenic |
TCTAGGTGAGCTTCTCATGG+GGG | 0.697948 | 8.3:-9314833 | MS.gene57710:CDS |
TAAATATGAGGAGACCAATG+TGG | 0.708708 | 8.3:-9314533 | MS.gene57710:CDS |
ATCTCCAATCCTCCACACAG+AGG | 0.744593 | 8.3:+9313345 | None:intergenic |
GGATGAAGAAGGCAATACCG+GGG | 0.767636 | 8.3:+9313756 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAACAAAGAGAGAAAA+TGG | + | chr8.3:9314492-9314511 | None:intergenic | 20.0% |
!! | ATCAAATACAAGATAGTTTA+TGG | + | chr8.3:9314910-9314929 | None:intergenic | 20.0% |
!! | GGTAAACTATAATAACTAAA+TGG | + | chr8.3:9313277-9313296 | None:intergenic | 20.0% |
!!! | TTTTCACAAATTCAAATTCT+GGG | - | chr8.3:9313120-9313139 | MS.gene57710:CDS | 20.0% |
! | AATCTTGAACTTCCTATTAT+GGG | - | chr8.3:9314443-9314462 | MS.gene57710:CDS | 25.0% |
! | CAAGAACATTAAATCTAAGA+TGG | + | chr8.3:9313615-9313634 | None:intergenic | 25.0% |
! | GTAAACATCTTAAACCTATA+AGG | + | chr8.3:9313382-9313401 | None:intergenic | 25.0% |
!! | CTTTTCACAAATTCAAATTC+TGG | - | chr8.3:9313119-9313138 | MS.gene57710:CDS | 25.0% |
!! | TTGTTATATTGCTATTGCTT+TGG | - | chr8.3:9314502-9314521 | MS.gene57710:CDS | 25.0% |
AAAGAACAGCTCAATGAAAA+GGG | + | chr8.3:9314691-9314710 | None:intergenic | 30.0% | |
AACAAAGAGAGAAAATGGAA+TGG | + | chr8.3:9314487-9314506 | None:intergenic | 30.0% | |
ACCATTATACACAACAAAGA+AGG | + | chr8.3:9314171-9314190 | None:intergenic | 30.0% | |
AGTTCAAGATCTTGAAAAAG+AGG | - | chr8.3:9313452-9313471 | MS.gene57710:CDS | 30.0% | |
ATCTTGAACTTCCTATTATG+GGG | - | chr8.3:9314444-9314463 | MS.gene57710:CDS | 30.0% | |
CAATCTTGAACTTCCTATTA+TGG | - | chr8.3:9314442-9314461 | MS.gene57710:CDS | 30.0% | |
GCATTATGCATAATACTACA+AGG | + | chr8.3:9313763-9313782 | None:intergenic | 30.0% | |
TAAAGAACAGCTCAATGAAA+AGG | + | chr8.3:9314692-9314711 | None:intergenic | 30.0% | |
TGTTCTTGTCCATAAATATG+AGG | - | chr8.3:9313627-9313646 | MS.gene57710:CDS | 30.0% | |
TTATCTTCTTGAGAACTGTT+AGG | - | chr8.3:9314034-9314053 | MS.gene57710:CDS | 30.0% | |
! | AATTTCTCTAGGAATTTGGT+TGG | + | chr8.3:9314607-9314626 | None:intergenic | 30.0% |
! | TACCTTTTTGTAAACCTCAA+GGG | - | chr8.3:9313293-9313312 | MS.gene57710:CDS | 30.0% |
! | TCCTTCTTTGTTGTGTATAA+TGG | - | chr8.3:9314167-9314186 | MS.gene57710:CDS | 30.0% |
! | TCTTTGTTGTGTATAATGGT+TGG | - | chr8.3:9314171-9314190 | MS.gene57710:CDS | 30.0% |
! | TTACCTTTTTGTAAACCTCA+AGG | - | chr8.3:9313292-9313311 | MS.gene57710:CDS | 30.0% |
!! | AAGATGAGTACTTTTTGAGA+TGG | - | chr8.3:9313539-9313558 | MS.gene57710:CDS | 30.0% |
!! | ATTTGTTTGGTGTTTCAATC+AGG | - | chr8.3:9313151-9313170 | MS.gene57710:CDS | 30.0% |
!! | CTGTTTTTCTACATGATACT+TGG | - | chr8.3:9314294-9314313 | MS.gene57710:CDS | 30.0% |
!! | TTTGTTTGGTGTTTCAATCA+GGG | - | chr8.3:9313152-9313171 | MS.gene57710:CDS | 30.0% |
!!! | CATTGTTTTGATTCTTCTTG+TGG | - | chr8.3:9314764-9314783 | MS.gene57710:CDS | 30.0% |
ACCCGAAAACATAGTAAACA+CGG | + | chr8.3:9314737-9314756 | None:intergenic | 35.0% | |
ATAGGAAGTTCAAGATTGTG+AGG | + | chr8.3:9314440-9314459 | None:intergenic | 35.0% | |
CAAATTCAAATTCTGGGTCA+TGG | - | chr8.3:9313126-9313145 | MS.gene57710:CDS | 35.0% | |
CACAACAAAGAAGGATTTGA+TGG | + | chr8.3:9314162-9314181 | None:intergenic | 35.0% | |
CACCAATTGCATAATTGTGT+GGG | + | chr8.3:9313204-9313223 | None:intergenic | 35.0% | |
CCTGAATCTTAATACCAACA+GGG | + | chr8.3:9313573-9313592 | None:intergenic | 35.0% | |
GATCACATTTAATAGGTGAC+GGG | + | chr8.3:9313822-9313841 | None:intergenic | 35.0% | |
GATGTTTACTAATGAGTCTG+AGG | - | chr8.3:9313393-9313412 | MS.gene57710:CDS | 35.0% | |
GGATCACATTTAATAGGTGA+CGG | + | chr8.3:9313823-9313842 | None:intergenic | 35.0% | |
GTCGATGGATCACATTTAAT+AGG | + | chr8.3:9313829-9313848 | None:intergenic | 35.0% | |
TAAATATGAGGAGACCAATG+TGG | - | chr8.3:9313639-9313658 | MS.gene57710:CDS | 35.0% | |
TAACAAGAACAATACCAGCA+AGG | + | chr8.3:9314017-9314036 | None:intergenic | 35.0% | |
TACCCACACAATTATGCAAT+TGG | - | chr8.3:9313199-9313218 | MS.gene57710:CDS | 35.0% | |
TCAATGAAAAGGGTTCCAAA+GGG | + | chr8.3:9314681-9314700 | None:intergenic | 35.0% | |
TCACCAATTGCATAATTGTG+TGG | + | chr8.3:9313205-9313224 | None:intergenic | 35.0% | |
TCCTGAATCTTAATACCAAC+AGG | + | chr8.3:9313574-9313593 | None:intergenic | 35.0% | |
TCTTTATCATGTCCAGCATT+TGG | - | chr8.3:9314706-9314725 | MS.gene57710:CDS | 35.0% | |
TTCTTCGTAAAACGAATAGC+AGG | + | chr8.3:9313520-9313539 | None:intergenic | 35.0% | |
TTTGATCTCAAGAATCTGAG+TGG | - | chr8.3:9314924-9314943 | MS.gene57710:CDS | 35.0% | |
! | ACAATATTGTTTGCTGCACT+TGG | - | chr8.3:9314228-9314247 | MS.gene57710:CDS | 35.0% |
! | ACCTTTTTGTAAACCTCAAG+GGG | - | chr8.3:9313294-9313313 | MS.gene57710:CDS | 35.0% |
! | CATTGGTCTCCTCATATTTA+TGG | + | chr8.3:9313639-9313658 | None:intergenic | 35.0% |
! | GAGGAATTTCTCTAGGAATT+TGG | + | chr8.3:9314611-9314630 | None:intergenic | 35.0% |
!! | CTTGTTTTCTTCTGTGAAGT+TGG | - | chr8.3:9315055-9315074 | MS.gene57710:CDS | 35.0% |
!! | TGCAATTGGTGATGAATTGT+CGG | - | chr8.3:9313213-9313232 | MS.gene57710:CDS | 35.0% |
!! | TTGTGTATAATGGTTGGTGA+TGG | - | chr8.3:9314177-9314196 | MS.gene57710:CDS | 35.0% |
!!! | AGTACTTTTTGAGATGGACT+GGG | - | chr8.3:9313545-9313564 | MS.gene57710:CDS | 35.0% |
!!! | TGTTTTGATTCTTCTTGTGG+TGG | - | chr8.3:9314767-9314786 | MS.gene57710:CDS | 35.0% |
AAGAAGGATTTGATGGAGCA+CGG | + | chr8.3:9314155-9314174 | None:intergenic | 40.0% | |
AAGTAAGCATCCCATCTAGA+TGG | + | chr8.3:9313931-9313950 | None:intergenic | 40.0% | |
AAGTACAGAGTTGCAGAAAC+AGG | + | chr8.3:9314951-9314970 | None:intergenic | 40.0% | |
AATCTAGGTGAGCTTCTCAT+GGG | - | chr8.3:9313337-9313356 | MS.gene57710:CDS | 40.0% | |
AATTGAGGATCGAGAACCAA+TGG | + | chr8.3:9313975-9313994 | None:intergenic | 40.0% | |
ATATCAAGTGGCCATCTAGA+TGG | - | chr8.3:9313917-9313936 | MS.gene57710:CDS | 40.0% | |
ATCATGTCCAGCATTTGGAT+GGG | - | chr8.3:9314711-9314730 | MS.gene57710:CDS | 40.0% | |
ATGATACTTGGTATTGCTGC+TGG | - | chr8.3:9314306-9314325 | MS.gene57710:CDS | 40.0% | |
ATGGGATGCTTACTTGAAGA+TGG | - | chr8.3:9313936-9313955 | MS.gene57710:CDS | 40.0% | |
CAAGATTGTGAGGATGAAGA+AGG | + | chr8.3:9314430-9314449 | None:intergenic | 40.0% | |
CAGATGAATGAGGAGTTATC+TGG | - | chr8.3:9314102-9314121 | MS.gene57710:CDS | 40.0% | |
CAGTTATGAGGAGCTTGATA+AGG | - | chr8.3:9314068-9314087 | MS.gene57710:CDS | 40.0% | |
CCCTGTTGGTATTAAGATTC+AGG | - | chr8.3:9313570-9313589 | MS.gene57710:CDS | 40.0% | |
CTCAATGAAAAGGGTTCCAA+AGG | + | chr8.3:9314682-9314701 | None:intergenic | 40.0% | |
CTTATCAAGCTCCTCATAAC+TGG | + | chr8.3:9314070-9314089 | None:intergenic | 40.0% | |
CTTCTTGAGAACTGTTAGGA+GGG | - | chr8.3:9314038-9314057 | MS.gene57710:CDS | 40.0% | |
GATGCTTACTTGAAGATGGA+GGG | - | chr8.3:9313940-9313959 | MS.gene57710:CDS | 40.0% | |
GTGGCAATGCCTATTAAAGA+AGG | - | chr8.3:9313850-9313869 | MS.gene57710:CDS | 40.0% | |
GTTATGTTTCAGTTCGACTG+TGG | - | chr8.3:9314328-9314347 | MS.gene57710:CDS | 40.0% | |
GTTTCTGCAACTCTGTACTT+GGG | - | chr8.3:9314951-9314970 | MS.gene57710:CDS | 40.0% | |
TAATTGTGTGGGTAACTACC+CGG | + | chr8.3:9313193-9313212 | None:intergenic | 40.0% | |
TACCTGTGATAAGTGTTCCA+CGG | + | chr8.3:9314272-9314291 | None:intergenic | 40.0% | |
TATCAAGTGGCCATCTAGAT+GGG | - | chr8.3:9313918-9313937 | MS.gene57710:CDS | 40.0% | |
TATCATGTCCAGCATTTGGA+TGG | - | chr8.3:9314710-9314729 | MS.gene57710:CDS | 40.0% | |
TCTCAGATCCTTCCTTAACA+GGG | + | chr8.3:9313705-9313724 | None:intergenic | 40.0% | |
TCTTCTTGAGAACTGTTAGG+AGG | - | chr8.3:9314037-9314056 | MS.gene57710:CDS | 40.0% | |
TGAATGAGGAGTTATCTGGT+TGG | - | chr8.3:9314106-9314125 | MS.gene57710:CDS | 40.0% | |
TGATCACCATCAACGAATTG+AGG | + | chr8.3:9313990-9314009 | None:intergenic | 40.0% | |
TGGAAATCATTCTTTGCCTC+TGG | - | chr8.3:9314855-9314874 | MS.gene57710:CDS | 40.0% | |
TTCTCAGATCCTTCCTTAAC+AGG | + | chr8.3:9313706-9313725 | None:intergenic | 40.0% | |
TTGAGGAGAGTGATATCAAG+TGG | - | chr8.3:9313905-9313924 | MS.gene57710:CDS | 40.0% | |
! | AAGGATAGTGCTGAGAATCT+AGG | - | chr8.3:9313322-9313341 | MS.gene57710:CDS | 40.0% |
! | CCTTTTTGTAAACCTCAAGG+GGG | - | chr8.3:9313295-9313314 | MS.gene57710:CDS | 40.0% |
! | GCCGTGTTTACTATGTTTTC+GGG | - | chr8.3:9314733-9314752 | MS.gene57710:CDS | 40.0% |
! | GGCCGTGTTTACTATGTTTT+CGG | - | chr8.3:9314732-9314751 | MS.gene57710:CDS | 40.0% |
! | GTGATGGAGTTCAGATTCTT+GGG | - | chr8.3:9314193-9314212 | MS.gene57710:CDS | 40.0% |
! | TAAATGTGATCCATCGACTG+TGG | - | chr8.3:9313831-9313850 | MS.gene57710:CDS | 40.0% |
! | TACTTTGGCTTCCCCATAAT+AGG | + | chr8.3:9314458-9314477 | None:intergenic | 40.0% |
! | TGTTTCTGCAACTCTGTACT+TGG | - | chr8.3:9314950-9314969 | MS.gene57710:CDS | 40.0% |
! | TTGGTGTTTCAATCAGGGTA+TGG | - | chr8.3:9313157-9313176 | MS.gene57710:CDS | 40.0% |
!! | CATGGTTCTAGCAATCATGT+TGG | - | chr8.3:9314986-9315005 | MS.gene57710:CDS | 40.0% |
!! | GGAATTTGGTTGGTTCTAAC+AGG | + | chr8.3:9314597-9314616 | None:intergenic | 40.0% |
!! | TGGTTCTAACAGGATACTCA+AGG | + | chr8.3:9314587-9314606 | None:intergenic | 40.0% |
!!! | GAGTACTTTTTGAGATGGAC+TGG | - | chr8.3:9313544-9313563 | MS.gene57710:CDS | 40.0% |
AACTTACATGCACCTCTGTG+TGG | - | chr8.3:9314815-9314834 | MS.gene57710:CDS | 45.0% | |
ACACGAACCAGAATGAAGAG+AGG | + | chr8.3:9315031-9315050 | None:intergenic | 45.0% | |
ACCAATGTGGCTCGTGTTAT+GGG | - | chr8.3:9313652-9313671 | MS.gene57710:CDS | 45.0% | |
ACCTGTGATAAGTGTTCCAC+GGG | + | chr8.3:9314271-9314290 | None:intergenic | 45.0% | |
AGCCACCAACAAGTGTAAGT+GGG | + | chr8.3:9314542-9314561 | None:intergenic | 45.0% | |
AGCTCAAGCACAGATGAATG+AGG | - | chr8.3:9314092-9314111 | MS.gene57710:CDS | 45.0% | |
AGGATGAAGAAGGCAATACC+GGG | + | chr8.3:9314420-9314439 | None:intergenic | 45.0% | |
AGGGTATGGTTTCTACCTTC+CGG | - | chr8.3:9313171-9313190 | MS.gene57710:CDS | 45.0% | |
ATCTAGGTGAGCTTCTCATG+GGG | - | chr8.3:9313338-9313357 | MS.gene57710:CDS | 45.0% | |
ATGATTCCCCCTGTTAAGGA+AGG | - | chr8.3:9313694-9313713 | MS.gene57710:CDS | 45.0% | |
ATGGAATGGCTCCTGTACTT+TGG | + | chr8.3:9314473-9314492 | None:intergenic | 45.0% | |
ATGGTGATCACTTTCCTTGC+TGG | - | chr8.3:9314000-9314019 | MS.gene57710:CDS | 45.0% | |
CCCCCTTGAGGTTTACAAAA+AGG | + | chr8.3:9313298-9313317 | None:intergenic | 45.0% | |
CCTAGAACTAAAAGCCACGA+CGG | + | chr8.3:9314645-9314664 | None:intergenic | 45.0% | |
CTAACAGGATACTCAAGGTG+AGG | + | chr8.3:9314582-9314601 | None:intergenic | 45.0% | |
CTAGAGAAATTCCTCAGCAG+CGG | - | chr8.3:9314616-9314635 | MS.gene57710:CDS | 45.0% | |
CTCAGATCCTTCCTTAACAG+GGG | + | chr8.3:9313704-9313723 | None:intergenic | 45.0% | |
CTCGATCCTCAATTCGTTGA+TGG | - | chr8.3:9313981-9314000 | MS.gene57710:CDS | 45.0% | |
CTGGGTCATGGCTATTTGTT+TGG | - | chr8.3:9313138-9313157 | MS.gene57710:CDS | 45.0% | |
CTTGGGATACTCACTCTTCA+TGG | - | chr8.3:9314968-9314987 | MS.gene57710:CDS | 45.0% | |
GAAAAGGGTTCCAAAGGGAA+GGG | + | chr8.3:9314676-9314695 | None:intergenic | 45.0% | |
GAATCTAGGTGAGCTTCTCA+TGG | - | chr8.3:9313336-9313355 | MS.gene57710:CDS | 45.0% | |
GAGGATGAAGAAGGCAATAC+CGG | + | chr8.3:9314421-9314440 | None:intergenic | 45.0% | |
GGATCGAGAATTCGCCTTAT+AGG | - | chr8.3:9313365-9313384 | MS.gene57710:CDS | 45.0% | |
GGATGCTTACTTGAAGATGG+AGG | - | chr8.3:9313939-9313958 | MS.gene57710:CDS | 45.0% | |
GTACATGGTTGTTGGGTTTG+AGG | - | chr8.3:9313732-9313751 | MS.gene57710:CDS | 45.0% | |
GTTATCTGGTTGGAAGCTTG+TGG | - | chr8.3:9314116-9314135 | MS.gene57710:CDS | 45.0% | |
TAAGGAAGGATCTGAGAAGC+CGG | - | chr8.3:9313708-9313727 | MS.gene57710:CDS | 45.0% | |
TACCTACGAGGTAACGTTTG+AGG | - | chr8.3:9313888-9313907 | MS.gene57710:CDS | 45.0% | |
TAGCCACCAACAAGTGTAAG+TGG | + | chr8.3:9314543-9314562 | None:intergenic | 45.0% | |
TCAGATCCTTCCTTAACAGG+GGG | + | chr8.3:9313703-9313722 | None:intergenic | 45.0% | |
TCTGTCCCACTTACACTTGT+TGG | - | chr8.3:9314534-9314553 | MS.gene57710:CDS | 45.0% | |
TGAAAAGGGTTCCAAAGGGA+AGG | + | chr8.3:9314677-9314696 | None:intergenic | 45.0% | |
TGAGATGATTCCCCCTGTTA+AGG | - | chr8.3:9313690-9313709 | MS.gene57710:CDS | 45.0% | |
TGCACTTGGATTCATGTCAC+CGG | - | chr8.3:9314242-9314261 | MS.gene57710:CDS | 45.0% | |
TGGAGTTCAGATTCTTGGGA+TGG | - | chr8.3:9314197-9314216 | MS.gene57710:CDS | 45.0% | |
TTATGGGGAAGCCAAAGTAC+AGG | - | chr8.3:9314459-9314478 | MS.gene57710:CDS | 45.0% | |
TTGGGTTCCTCTCTTCATTC+TGG | - | chr8.3:9315021-9315040 | MS.gene57710:CDS | 45.0% | |
! | AAAGCTGCTTGTTTCTTCCC+CGG | - | chr8.3:9314399-9314418 | MS.gene57710:CDS | 45.0% |
! | GATCGAGAACCAATGGACTT+TGG | + | chr8.3:9313968-9313987 | None:intergenic | 45.0% |
! | TGGTGATGAATTGTCGGTGA+AGG | - | chr8.3:9313219-9313238 | MS.gene57710:CDS | 45.0% |
!! | ACACTTGTTGGTGGCTACTT+TGG | - | chr8.3:9314546-9314565 | MS.gene57710:CDS | 45.0% |
!! | CTAGCAATCATGTTGGTGAC+AGG | - | chr8.3:9314993-9315012 | MS.gene57710:CDS | 45.0% |
!! | GGTGATGGAGTTCAGATTCT+TGG | - | chr8.3:9314192-9314211 | MS.gene57710:CDS | 45.0% |
!! | TAAACCTCAAGGGGGTGTTA+AGG | - | chr8.3:9313303-9313322 | MS.gene57710:CDS | 45.0% |
!!! | TGGCTTTTAGTTCTAGGTGC+TGG | - | chr8.3:9314648-9314667 | MS.gene57710:CDS | 45.0% |
AACCCAACAACCATGTACCC+CGG | + | chr8.3:9313730-9313749 | None:intergenic | 50.0% | |
AAGGAAGGATCTGAGAAGCC+GGG | - | chr8.3:9313709-9313728 | MS.gene57710:CDS | 50.0% | |
AATCATCTCAGCCGCATCAC+CGG | + | chr8.3:9313680-9313699 | None:intergenic | 50.0% | |
ACCTCGTAGGTAAACGCAAG+CGG | + | chr8.3:9313880-9313899 | None:intergenic | 50.0% | |
AGGGTTGGGTTTCAGTTGCA+TGG | - | chr8.3:9314376-9314395 | MS.gene57710:CDS | 50.0% | |
ATCTCCAATCCTCCACACAG+AGG | + | chr8.3:9314830-9314849 | None:intergenic | 50.0% | |
ATCTGGTTGGAAGCTTGTGG+TGG | - | chr8.3:9314119-9314138 | MS.gene57710:CDS | 50.0% | |
CGCTGCTGAGGAATTTCTCT+AGG | + | chr8.3:9314618-9314637 | None:intergenic | 50.0% | |
CTATCCTTAACACCCCCTTG+AGG | + | chr8.3:9313310-9313329 | None:intergenic | 50.0% | |
CTCCTCAAACGTTACCTCGT+AGG | + | chr8.3:9313893-9313912 | None:intergenic | 50.0% | |
GACCAATGTGGCTCGTGTTA+TGG | - | chr8.3:9313651-9313670 | MS.gene57710:CDS | 50.0% | |
GAGAACTGTTAGGAGGGATC+TGG | - | chr8.3:9314044-9314063 | MS.gene57710:CDS | 50.0% | |
GGATGAAGAAGGCAATACCG+GGG | + | chr8.3:9314419-9314438 | None:intergenic | 50.0% | |
GGGTATGGTTTCTACCTTCC+GGG | - | chr8.3:9313172-9313191 | MS.gene57710:CDS | 50.0% | |
GTACAGTGCAACAGAACCAG+AGG | + | chr8.3:9314874-9314893 | None:intergenic | 50.0% | |
TCCCATAACACGAGCCACAT+TGG | + | chr8.3:9313656-9313675 | None:intergenic | 50.0% | |
TCCCGTGGAACACTTATCAC+AGG | - | chr8.3:9314267-9314286 | MS.gene57710:CDS | 50.0% | |
TCTAGGTGAGCTTCTCATGG+GGG | - | chr8.3:9313339-9313358 | MS.gene57710:CDS | 50.0% | |
TCTGGTTGGAAGCTTGTGGT+GGG | - | chr8.3:9314120-9314139 | MS.gene57710:CDS | 50.0% | |
TCTGTGTGGAGGATTGGAGA+TGG | - | chr8.3:9314829-9314848 | MS.gene57710:CDS | 50.0% | |
TGTGATAAGTGTTCCACGGG+AGG | + | chr8.3:9314268-9314287 | None:intergenic | 50.0% | |
TGTTATGGGAACCGGTGATG+CGG | - | chr8.3:9313666-9313685 | MS.gene57710:CDS | 50.0% | |
TTACATGCACCTCTGTGTGG+AGG | - | chr8.3:9314818-9314837 | MS.gene57710:CDS | 50.0% | |
! | ATAGGCATTGCCACAGTCGA+TGG | + | chr8.3:9313844-9313863 | None:intergenic | 50.0% |
! | GTCCCACTTACACTTGTTGG+TGG | - | chr8.3:9314537-9314556 | MS.gene57710:CDS | 50.0% |
! | TCTTGTGGTGGTTTGTGCTG+AGG | - | chr8.3:9314779-9314798 | MS.gene57710:CDS | 50.0% |
!! | AGCGGCTGGCCTTCTTTAAT+AGG | + | chr8.3:9313862-9313881 | None:intergenic | 50.0% |
!! | ATGTTGGTGACAGGCACAGT+TGG | - | chr8.3:9315002-9315021 | MS.gene57710:CDS | 50.0% |
!! | TGGTGGCTACTTTGGAGCAA+AGG | - | chr8.3:9314554-9314573 | MS.gene57710:CDS | 50.0% |
!! | TGTTGGTGACAGGCACAGTT+GGG | - | chr8.3:9315003-9315022 | MS.gene57710:CDS | 50.0% |
!!! | CCGTCGTGGCTTTTAGTTCT+AGG | - | chr8.3:9314642-9314661 | MS.gene57710:CDS | 50.0% |
AACACGGCCCATCCAAATGC+TGG | + | chr8.3:9314721-9314740 | None:intergenic | 55.0% | |
AAGCCGGGGTACATGGTTGT+TGG | - | chr8.3:9313724-9313743 | MS.gene57710:CDS | 55.0% | |
AGCCGGGGTACATGGTTGTT+GGG | - | chr8.3:9313725-9313744 | MS.gene57710:CDS | 55.0% | |
AGGAAGGATCTGAGAAGCCG+GGG | - | chr8.3:9313710-9313729 | MS.gene57710:CDS | 55.0% | |
ATAAGTGTTCCACGGGAGGC+CGG | + | chr8.3:9314264-9314283 | None:intergenic | 55.0% | |
ATCTGAGAAGCCGGGGTACA+TGG | - | chr8.3:9313717-9313736 | MS.gene57710:CDS | 55.0% | |
CTGGTTGGAAGCTTGTGGTG+GGG | - | chr8.3:9314121-9314140 | MS.gene57710:CDS | 55.0% | |
GAGGGATCTGGCCAGTTATG+AGG | - | chr8.3:9314056-9314075 | MS.gene57710:CDS | 55.0% | |
GTGAGCTTCTCATGGGGGAT+CGG | - | chr8.3:9313344-9313363 | MS.gene57710:CDS | 55.0% | |
GTGGCTCGTGTTATGGGAAC+CGG | - | chr8.3:9313658-9313677 | MS.gene57710:CDS | 55.0% | |
GTGTGGAGGATTGGAGATGG+TGG | - | chr8.3:9314832-9314851 | MS.gene57710:CDS | 55.0% | |
TGCACCTCTGTGTGGAGGAT+TGG | - | chr8.3:9314823-9314842 | MS.gene57710:CDS | 55.0% | |
TGGAGGGAGCCAAAGTCCAT+TGG | - | chr8.3:9313956-9313975 | MS.gene57710:CDS | 55.0% | |
TGGTTGGAAGCTTGTGGTGG+GGG | - | chr8.3:9314122-9314141 | MS.gene57710:CDS | 55.0% | |
TGTGTGGGTAACTACCCGGA+AGG | + | chr8.3:9313189-9313208 | None:intergenic | 55.0% | |
! | TGGAGGATTGGAGATGGTGG+TGG | - | chr8.3:9314835-9314854 | MS.gene57710:CDS | 55.0% |
!! | AGATGGACTGGGTACCCTGT+TGG | - | chr8.3:9313556-9313575 | MS.gene57710:CDS | 55.0% |
CGTAGGTAAACGCAAGCGGC+TGG | + | chr8.3:9313876-9313895 | None:intergenic | 60.0% | |
CTGTGGAGAACACTCGCGTG+CGG | - | chr8.3:9314345-9314364 | MS.gene57710:CDS | 60.0% | |
GCCGCTTGCGTTTACCTACG+AGG | - | chr8.3:9313876-9313895 | MS.gene57710:CDS | 60.0% | |
GTGCGGCGATCAGAAGGGTT+GGG | - | chr8.3:9314362-9314381 | MS.gene57710:CDS | 60.0% | |
ACTCGCGTGCGGCGATCAGA+AGG | - | chr8.3:9314356-9314375 | MS.gene57710:CDS | 65.0% | |
CACGACGGATACCGCTGCTG+AGG | + | chr8.3:9314630-9314649 | None:intergenic | 65.0% | |
CGTGCGGCGATCAGAAGGGT+TGG | - | chr8.3:9314361-9314380 | MS.gene57710:CDS | 65.0% | |
CTCAGCAGCGGTATCCGTCG+TGG | - | chr8.3:9314628-9314647 | MS.gene57710:CDS | 65.0% | |
CTCGCGTGCGGCGATCAGAA+GGG | - | chr8.3:9314357-9314376 | MS.gene57710:CDS | 65.0% | |
TTCATGTCACCGGCCTCCCG+TGG | - | chr8.3:9314252-9314271 | MS.gene57710:CDS | 65.0% | |
!! | GGTGCTGGCACCCTTCCCTT+TGG | - | chr8.3:9314663-9314682 | MS.gene57710:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 9313112 | 9315082 | 9313112 | ID=MS.gene57710 |
chr8.3 | mRNA | 9313112 | 9315082 | 9313112 | ID=MS.gene57710.t1;Parent=MS.gene57710 |
chr8.3 | exon | 9313112 | 9315082 | 9313112 | ID=MS.gene57710.t1.exon1;Parent=MS.gene57710.t1 |
chr8.3 | CDS | 9313112 | 9315082 | 9313112 | ID=cds.MS.gene57710.t1;Parent=MS.gene57710.t1 |
Gene Sequence |
Protein sequence |