Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59295.t1 | XP_024641827.1 | 96.4 | 781 | 26 | 1 | 9 | 787 | 61 | 841 | 0.00E+00 | 1389.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59295.t1 | A0A396HMI3 | 96.4 | 781 | 26 | 1 | 9 | 787 | 61 | 841 | 0.0e+00 | 1389.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene59295 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene59295 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene59295 | 0.835008 | 2.15E-56 | -1.69E-46 |
| MS.gene050808 | MS.gene59295 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene59295 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene59295 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene59295 | 0.830667 | 2.58E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene59295 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene59295 | 0.841295 | 5.18E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene59295 | 0.86561 | 5.21E-65 | -1.69E-46 |
| MS.gene052133 | MS.gene59295 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene59295 | 0.819543 | 1.10E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene59295 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene052732 | MS.gene59295 | 0.84752 | 1.10E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene59295 | 0.852001 | 6.15E-61 | -1.69E-46 |
| MS.gene053174 | MS.gene59295 | 0.820043 | 8.45E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene59295 | 0.834863 | 2.34E-56 | -1.69E-46 |
| MS.gene054550 | MS.gene59295 | 0.840326 | 9.30E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene59295 | 0.859014 | 5.54E-63 | -1.69E-46 |
| MS.gene054791 | MS.gene59295 | 0.811635 | 6.34E-51 | -1.69E-46 |
| MS.gene055144 | MS.gene59295 | 0.82646 | 2.68E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene59295 | 0.848771 | 4.96E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene59295 | 0.823413 | 1.40E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene59295 | 0.831197 | 1.91E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene59295 | 0.833731 | 4.51E-56 | -1.69E-46 |
| MS.gene055537 | MS.gene59295 | 0.862174 | 6.11E-64 | -1.69E-46 |
| MS.gene055580 | MS.gene59295 | -0.810096 | 1.37E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene59295 | 0.824077 | 9.81E-54 | -1.69E-46 |
| MS.gene055891 | MS.gene59295 | 0.845953 | 2.94E-59 | -1.69E-46 |
| MS.gene056005 | MS.gene59295 | 0.808261 | 3.38E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene59295 | 0.824585 | 7.45E-54 | -1.69E-46 |
| MS.gene058087 | MS.gene59295 | 0.812445 | 4.23E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene59295 | 0.809432 | 1.90E-50 | -1.69E-46 |
| MS.gene060519 | MS.gene59295 | 0.818628 | 1.78E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene59295 | 0.824715 | 6.94E-54 | -1.69E-46 |
| MS.gene061006 | MS.gene59295 | 0.806555 | 7.77E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59295.t1 | AT1G12380 | 56.147 | 789 | 297 | 9 | 14 | 784 | 33 | 790 | 0.0 | 868 |
| MS.gene59295.t1 | AT1G62870 | 56.977 | 774 | 288 | 11 | 15 | 784 | 27 | 759 | 0.0 | 857 |
Find 0 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAGTAATTATAATAATGAT+AGG | - | 42850:3158-3177 | MS.gene59295:CDS | 15.0% |
| !!! | AAGTTTTCAAAATCATAACT+TGG | - | 42850:2667-2686 | MS.gene59295:CDS | 20.0% |
| !!! | TGTTCTAATTTTAACAATTC+TGG | - | 42850:2515-2534 | MS.gene59295:CDS | 20.0% |
| !!! | TTTTGAAAACTTAATGATGA+TGG | + | 42850:2659-2678 | MS.gene59295:intergenic | 20.0% |
| !!! | TTTTGTTAATTATAGAATGC+AGG | - | 42850:3573-3592 | MS.gene59295:CDS | 20.0% |
| ! | AAAAGATGATTTATGTGCAT+TGG | - | 42850:2799-2818 | MS.gene59295:CDS | 25.0% |
| ! | AATAATGATAGGAGTTTGTA+TGG | - | 42850:3169-3188 | MS.gene59295:CDS | 25.0% |
| ! | TGTGAAGATTATTAAAGGAA+TGG | - | 42850:3831-3850 | MS.gene59295:CDS | 25.0% |
| ! | TGTGTGAGTTTAAATCTTTA+GGG | - | 42850:4310-4329 | MS.gene59295:CDS | 25.0% |
| ! | TTGTGTGAGTTTAAATCTTT+AGG | - | 42850:4309-4328 | MS.gene59295:CDS | 25.0% |
| !! | TTTTATAGACAATGAATCTC+AGG | - | 42850:3540-3559 | MS.gene59295:CDS | 25.0% |
| ACTAGCTACTTGAAAAAACA+TGG | + | 42850:3110-3129 | MS.gene59295:intergenic | 30.0% | |
| ATTTGGAGAATCAAAACCAT+TGG | - | 42850:3407-3426 | MS.gene59295:CDS | 30.0% | |
| CATGTGGATTTAAGAGTAAT+TGG | - | 42850:4370-4389 | MS.gene59295:CDS | 30.0% | |
| GATTATTAAAGGAATGGTTC+AGG | - | 42850:3837-3856 | MS.gene59295:CDS | 30.0% | |
| GATTGTTGCTGATAAGTTTA+AGG | - | 42850:3369-3388 | MS.gene59295:CDS | 30.0% | |
| GTGTCTTTAATCAAGTAAAG+TGG | + | 42850:4042-4061 | MS.gene59295:intergenic | 30.0% | |
| TAATTATAGAATGCAGGAGA+TGG | - | 42850:3579-3598 | MS.gene59295:CDS | 30.0% | |
| TACTTCTTTGAGTAAAGAAC+AGG | - | 42850:2874-2893 | MS.gene59295:CDS | 30.0% | |
| TACTTGATTAAAGACACAAG+TGG | - | 42850:4045-4064 | MS.gene59295:CDS | 30.0% | |
| TCAAAATCATAACTTGGCAT+TGG | - | 42850:2673-2692 | MS.gene59295:CDS | 30.0% | |
| TCGCTTGTGAAGATTATTAA+AGG | - | 42850:3826-3845 | MS.gene59295:CDS | 30.0% | |
| TCTTTCATGAGAAAAGTTTC+TGG | - | 42850:4393-4412 | MS.gene59295:CDS | 30.0% | |
| TGAGAGTTTGGTTAAGTTTA+TGG | - | 42850:3207-3226 | MS.gene59295:CDS | 30.0% | |
| TGGAGAAAATACTCGAAAAA+CGG | - | 42850:3968-3987 | MS.gene59295:CDS | 30.0% | |
| TTATGGTGAATCTACCAAAT+GGG | - | 42850:3224-3243 | MS.gene59295:CDS | 30.0% | |
| TTTATGGTGAATCTACCAAA+TGG | - | 42850:3223-3242 | MS.gene59295:CDS | 30.0% | |
| ! | ATCTCTTTGTTTCATCTGAA+CGG | + | 42850:4226-4245 | MS.gene59295:intergenic | 30.0% |
| ! | TAAATCTTTAGGGAAGATAG+CGG | - | 42850:4320-4339 | MS.gene59295:CDS | 30.0% |
| ! | TTGTTGTTAAAATCTGAACC+CGG | - | 42850:2539-2558 | MS.gene59295:CDS | 30.0% |
| ! | TTTTGATGGAGCTAATGAAA+TGG | - | 42850:4166-4185 | MS.gene59295:CDS | 30.0% |
| !! | AAAACTTAATGATGATGGTG+AGG | + | 42850:2654-2673 | MS.gene59295:intergenic | 30.0% |
| !! | AAGAAGTATTTACCATCCAA+TGG | + | 42850:3426-3445 | MS.gene59295:intergenic | 30.0% |
| !! | AGGGTTTGTTAGTTTAATCA+AGG | - | 42850:3456-3475 | MS.gene59295:CDS | 30.0% |
| !!! | GATTGGTTTTATGAATGTTG+TGG | - | 42850:2923-2942 | MS.gene59295:CDS | 30.0% |
| !!! | TTTTTTCAAGTAGCTAGTGA+TGG | - | 42850:3112-3131 | MS.gene59295:CDS | 30.0% |
| AACCGGAAAAGAGATCAAAT+GGG | - | 42850:2608-2627 | MS.gene59295:CDS | 35.0% | |
| AATACTTCTTGTCAGCTTCA+AGG | - | 42850:3436-3455 | MS.gene59295:CDS | 35.0% | |
| ACCAAAGCTGTTAAAGGTAA+AGG | - | 42850:2338-2357 | MS.gene59295:CDS | 35.0% | |
| ACCTTTACCTTTAACAGCTT+TGG | + | 42850:2342-2361 | MS.gene59295:intergenic | 35.0% | |
| AGTAAATACAATGTCGTCGA+AGG | - | 42850:3940-3959 | MS.gene59295:CDS | 35.0% | |
| AGTGATTCAAATGGTTGTGA+TGG | - | 42850:3702-3721 | MS.gene59295:CDS | 35.0% | |
| ATACTTCTTGTCAGCTTCAA+GGG | - | 42850:3437-3456 | MS.gene59295:CDS | 35.0% | |
| CTAATGAAATGGAGATCAGA+AGG | - | 42850:4177-4196 | MS.gene59295:CDS | 35.0% | |
| CTCAAAATATCCTCAAGCAT+CGG | + | 42850:3673-3692 | MS.gene59295:intergenic | 35.0% | |
| TCAAAAACACTACTCCCATT+TGG | + | 42850:3241-3260 | MS.gene59295:intergenic | 35.0% | |
| TCAGGATTTCGAACCAAAAT+AGG | + | 42850:2389-2408 | MS.gene59295:intergenic | 35.0% | |
| TTCGAACCAAAATAGGTTCA+AGG | + | 42850:2382-2401 | MS.gene59295:intergenic | 35.0% | |
| TTCTTCAACGGATCACATTT+CGG | + | 42850:3634-3653 | MS.gene59295:intergenic | 35.0% | |
| TTTCTTCATGCAACTTCATG+TGG | - | 42850:4354-4373 | MS.gene59295:CDS | 35.0% | |
| ! | AGTGTTGTTCAAAGATGTGT+AGG | - | 42850:3346-3365 | MS.gene59295:CDS | 35.0% |
| ! | AGTTTGTATGGTTTGTGTTG+TGG | - | 42850:3181-3200 | MS.gene59295:CDS | 35.0% |
| ! | CAAGCTTTTCTTTCTCAAGT+TGG | - | 42850:2983-3002 | MS.gene59295:CDS | 35.0% |
| ! | CTTTGGATTTACTTGCTGAT+TGG | - | 42850:2906-2925 | MS.gene59295:CDS | 35.0% |
| ! | GCAGAATTGTTTTCCATTTC+TGG | - | 42850:4522-4541 | MS.gene59295:CDS | 35.0% |
| ! | GTGTTGTTCAAAGATGTGTA+GGG | - | 42850:3347-3366 | MS.gene59295:CDS | 35.0% |
| ! | TGCTGATAAGTTTAAGGCTA+AGG | - | 42850:3375-3394 | MS.gene59295:CDS | 35.0% |
| !! | AACTTGGCATTGGTTGAAAT+TGG | - | 42850:2683-2702 | MS.gene59295:CDS | 35.0% |
| !! | AAGAAGAGATTTTTCTAGCG+AGG | - | 42850:4488-4507 | MS.gene59295:CDS | 35.0% |
| !! | CAAAAACTCTAGAGTTGCAT+TGG | - | 42850:4419-4438 | MS.gene59295:CDS | 35.0% |
| !! | GAGTAGTGTTTTTGAAAAGG+CGG | - | 42850:3246-3265 | MS.gene59295:CDS | 35.0% |
| !! | TCTTAGTAGTCGACTTGTTT+GGG | - | 42850:4278-4297 | MS.gene59295:CDS | 35.0% |
| !! | TCTTTACTCAAAGAAGTACC+AGG | + | 42850:2872-2891 | MS.gene59295:intergenic | 35.0% |
| !! | TGGGAGTAGTGTTTTTGAAA+AGG | - | 42850:3243-3262 | MS.gene59295:CDS | 35.0% |
| !!! | TTTTCGAGTATTTTCTCCAC+TGG | + | 42850:3967-3986 | MS.gene59295:intergenic | 35.0% |
| AAACAAAGAGATCCAGTCAC+TGG | - | 42850:4234-4253 | MS.gene59295:CDS | 40.0% | |
| AATGGTTCAGGATATAGAGG+CGG | - | 42850:3849-3868 | MS.gene59295:CDS | 40.0% | |
| ACAGCAAGTTCTTCTGAACT+AGG | + | 42850:2275-2294 | MS.gene59295:intergenic | 40.0% | |
| ACTTTCATCTTACCAGTGAC+TGG | + | 42850:4249-4268 | MS.gene59295:intergenic | 40.0% | |
| AGAACAGGTGAATTCTGCTT+TGG | - | 42850:2889-2908 | MS.gene59295:CDS | 40.0% | |
| AGCAGTTAACAAACGATACG+AGG | - | 42850:2298-2317 | MS.gene59295:CDS | 40.0% | |
| AGGAATGGTTCAGGATATAG+AGG | - | 42850:3846-3865 | MS.gene59295:CDS | 40.0% | |
| AGTGATGGTTGGAAGAGTTA+TGG | - | 42850:3127-3146 | MS.gene59295:CDS | 40.0% | |
| AGTTCTTCTGAACTAGGAAG+TGG | + | 42850:2269-2288 | MS.gene59295:intergenic | 40.0% | |
| ATCTTCGTCACTTCCAGAAA+TGG | + | 42850:4538-4557 | MS.gene59295:intergenic | 40.0% | |
| CAAACAAGTCGACTACTAAG+AGG | + | 42850:4279-4298 | MS.gene59295:intergenic | 40.0% | |
| CAATCAGGTGCATGGTAATA+TGG | - | 42850:2709-2728 | MS.gene59295:CDS | 40.0% | |
| CAGACAACATCAAATGATGC+TGG | + | 42850:2775-2794 | MS.gene59295:intergenic | 40.0% | |
| CAGCATCATTTGATGTTGTC+TGG | - | 42850:2773-2792 | MS.gene59295:CDS | 40.0% | |
| CATCATTTGATGTTGTCTGG+TGG | - | 42850:2776-2795 | MS.gene59295:CDS | 40.0% | |
| CTGTGCTAGAGTGATTCAAA+TGG | - | 42850:3693-3712 | MS.gene59295:CDS | 40.0% | |
| GAACCGGAAAAGAGATCAAA+TGG | - | 42850:2607-2626 | MS.gene59295:CDS | 40.0% | |
| GATTCAAATGGTTGTGATGG+AGG | - | 42850:3705-3724 | MS.gene59295:CDS | 40.0% | |
| GCAGTTAACAAACGATACGA+GGG | - | 42850:2299-2318 | MS.gene59295:CDS | 40.0% | |
| GGAGAATCAAAACCATTGGA+TGG | - | 42850:3411-3430 | MS.gene59295:CDS | 40.0% | |
| GGTTGAAATTGGCTACAATC+AGG | - | 42850:2694-2713 | MS.gene59295:CDS | 40.0% | |
| GTTCGAACCAAAGCTGTTAA+AGG | - | 42850:2332-2351 | MS.gene59295:CDS | 40.0% | |
| TAGACAATGAATCTCAGGTG+AGG | - | 42850:3545-3564 | MS.gene59295:CDS | 40.0% | |
| TGAAGTTAAGAGTGAATCCG+AGG | - | 42850:3069-3088 | MS.gene59295:CDS | 40.0% | |
| TGAATCCGAGGCGAAAATTA+GGG | - | 42850:3081-3100 | MS.gene59295:CDS | 40.0% | |
| TTCAAGTAGCTAGTGATGGT+TGG | - | 42850:3116-3135 | MS.gene59295:CDS | 40.0% | |
| TTTGAAAAGGCGGTGTTTAC+CGG | - | 42850:3256-3275 | MS.gene59295:CDS | 40.0% | |
| ! | AACAACGAGCTCGAACTTTT+CGG | - | 42850:3484-3503 | MS.gene59295:CDS | 40.0% |
| ! | AAGGTAAAGGTGCATGGTAT+TGG | - | 42850:2351-2370 | MS.gene59295:CDS | 40.0% |
| ! | CTCCCATTTGATCTCTTTTC+CGG | + | 42850:2613-2632 | MS.gene59295:intergenic | 40.0% |
| ! | CTGTTAAAGGTAAAGGTGCA+TGG | - | 42850:2345-2364 | MS.gene59295:CDS | 40.0% |
| ! | GACACACCTTGAACCTATTT+TGG | - | 42850:2373-2392 | MS.gene59295:CDS | 40.0% |
| ! | GTTTAAGGCAATGTTCATGG+AGG | - | 42850:3732-3751 | MS.gene59295:CDS | 40.0% |
| ! | TTGGTTCGAAATCCTGATAC+TGG | - | 42850:2392-2411 | MS.gene59295:CDS | 40.0% |
| ! | TTGTATGGTTTGTGTTGTGG+TGG | - | 42850:3184-3203 | MS.gene59295:CDS | 40.0% |
| !! | AATGATGCTGGTTCTGATTC+TGG | + | 42850:2763-2782 | MS.gene59295:intergenic | 40.0% |
| !! | AGTTTAAGGCTAAGGCATTG+AGG | - | 42850:3383-3402 | MS.gene59295:CDS | 40.0% |
| !! | CTCTTAGTAGTCGACTTGTT+TGG | - | 42850:4277-4296 | MS.gene59295:CDS | 40.0% |
| !! | GTTCTGAAGCTGTTCTTGAA+GGG | + | 42850:2478-2497 | MS.gene59295:intergenic | 40.0% |
| !! | TGGTTCAGAATGAGGTGTTT+TGG | - | 42850:3782-3801 | MS.gene59295:CDS | 40.0% |
| !! | TGTTCTGAAGCTGTTCTTGA+AGG | + | 42850:2479-2498 | MS.gene59295:intergenic | 40.0% |
| !!! | AGAAGCTCATGTCGTTTTGA+TGG | - | 42850:4152-4171 | MS.gene59295:CDS | 40.0% |
| AAGAGTCCTAAGACTTCACC+TGG | - | 42850:2851-2870 | MS.gene59295:CDS | 45.0% | |
| ACGGACGCAAAGTTCTTCAA+CGG | + | 42850:3646-3665 | MS.gene59295:intergenic | 45.0% | |
| ACTACACCACTCCTTCACTT+TGG | + | 42850:3923-3942 | MS.gene59295:intergenic | 45.0% | |
| AGAATGCAGGAGATGGAGTA+TGG | - | 42850:3586-3605 | MS.gene59295:CDS | 45.0% | |
| AGGTCGATGTTTGCCTCTTT+GGG | - | 42850:3885-3904 | MS.gene59295:CDS | 45.0% | |
| ATTGGCTACAATCAGGTGCA+TGG | - | 42850:2701-2720 | MS.gene59295:CDS | 45.0% | |
| CGTCTCAAACAACTTCCTAC+AGG | + | 42850:3013-3032 | MS.gene59295:intergenic | 45.0% | |
| CGTGTCAGAAACTTGAATGG+CGG | + | 42850:4081-4100 | MS.gene59295:intergenic | 45.0% | |
| GAAAAAACTACCACCCTGCA+TGG | - | 42850:3995-4014 | MS.gene59295:CDS | 45.0% | |
| GAAACCGACGAAATAGGAAC+CGG | + | 42850:2581-2600 | MS.gene59295:intergenic | 45.0% | |
| GAAATAGGAACCGGTGAAAC+CGG | + | 42850:2572-2591 | MS.gene59295:intergenic | 45.0% | |
| GAATTCGAAGTATGCTGAGG+AGG | - | 42850:3291-3310 | MS.gene59295:CDS | 45.0% | |
| GATTTAGCGAGACCAGTATC+AGG | + | 42850:2407-2426 | MS.gene59295:intergenic | 45.0% | |
| GCTTCAGAACATCTCAAACG+TGG | - | 42850:2488-2507 | MS.gene59295:CDS | 45.0% | |
| GGAGATGAGAACCAAAGTGA+AGG | - | 42850:3909-3928 | MS.gene59295:CDS | 45.0% | |
| GGATCCAAATGCTAGAGAAG+TGG | - | 42850:3753-3772 | MS.gene59295:CDS | 45.0% | |
| GGCAAACATCGACCTATCAA+CGG | + | 42850:3880-3899 | MS.gene59295:intergenic | 45.0% | |
| GGTGAATTCGAAGTATGCTG+AGG | - | 42850:3288-3307 | MS.gene59295:CDS | 45.0% | |
| GTGAATCCGAGGCGAAAATT+AGG | - | 42850:3080-3099 | MS.gene59295:CDS | 45.0% | |
| GTGTCAGAAACTTGAATGGC+GGG | + | 42850:4080-4099 | MS.gene59295:intergenic | 45.0% | |
| TAGGTCGATGTTTGCCTCTT+TGG | - | 42850:3884-3903 | MS.gene59295:CDS | 45.0% | |
| TCGCGTGTCAGAAACTTGAA+TGG | + | 42850:4084-4103 | MS.gene59295:intergenic | 45.0% | |
| TGAGAACCAAAGTGAAGGAG+TGG | - | 42850:3914-3933 | MS.gene59295:CDS | 45.0% | |
| ! | AGGAAGTGGTTCTGTTGAAG+TGG | + | 42850:2255-2274 | MS.gene59295:intergenic | 45.0% |
| ! | AGTATGCTGAGGAGGTTTTG+TGG | - | 42850:3299-3318 | MS.gene59295:CDS | 45.0% |
| ! | CGCGTTTAAGGCAATGTTCA+TGG | - | 42850:3729-3748 | MS.gene59295:CDS | 45.0% |
| ! | GAAGTACCAGGTGAAGTCTT+AGG | + | 42850:2860-2879 | MS.gene59295:intergenic | 45.0% |
| ! | GGTTCTGATTCTGGTGATTC+TGG | + | 42850:2754-2773 | MS.gene59295:intergenic | 45.0% |
| ! | TTAAACCTAGCATCGAGCCT+TGG | + | 42850:3049-3068 | MS.gene59295:intergenic | 45.0% |
| !! | ATCCTCAAGCATCGGAAACA+CGG | + | 42850:3665-3684 | MS.gene59295:intergenic | 45.0% |
| !! | ATCTCTTTTCCGGTTCGAAC+CGG | + | 42850:2603-2622 | MS.gene59295:intergenic | 45.0% |
| !! | GATTCTGGTGATTCTGGTTC+TGG | + | 42850:2748-2767 | MS.gene59295:intergenic | 45.0% |
| !! | GATTCTGGTTCTGGTTCTGA+TGG | + | 42850:2739-2758 | MS.gene59295:intergenic | 45.0% |
| !! | GGCTAAGGCATTGAGGAATT+TGG | - | 42850:3390-3409 | MS.gene59295:CDS | 45.0% |
| !! | GTATGCTGAGGAGGTTTTGT+GGG | - | 42850:3300-3319 | MS.gene59295:CDS | 45.0% |
| !! | GTTCCTATTTCGTCGGTTTC+CGG | - | 42850:2581-2600 | MS.gene59295:CDS | 45.0% |
| !! | TCTCAAGTTGGTTTGCCTGT+AGG | - | 42850:2995-3014 | MS.gene59295:CDS | 45.0% |
| !! | TTCACCGGTTCCTATTTCGT+CGG | - | 42850:2574-2593 | MS.gene59295:CDS | 45.0% |
| !!! | GAATGAGGTGTTTTGGAACG+AGG | - | 42850:3789-3808 | MS.gene59295:CDS | 45.0% |
| !!! | GTTTTGGAACGAGGTTGAAG+CGG | - | 42850:3798-3817 | MS.gene59295:CDS | 45.0% |
| AACGGATCACATTTCGGCGA+AGG | + | 42850:3628-3647 | MS.gene59295:intergenic | 50.0% | |
| ATAAATGCCGCTGACCATGC+AGG | + | 42850:4012-4031 | MS.gene59295:intergenic | 50.0% | |
| ATCTGAACCCGGTTCAGTTC+CGG | - | 42850:2550-2569 | MS.gene59295:CDS | 50.0% | |
| ATGCAGGAGATGGAGTATGG+CGG | - | 42850:3589-3608 | MS.gene59295:CDS | 50.0% | |
| CCAAATGCTAGAGAAGTGGC+TGG | - | 42850:3757-3776 | MS.gene59295:CDS | 50.0% | |
| CCAGCCACTTCTCTAGCATT+TGG | + | 42850:3760-3779 | MS.gene59295:intergenic | 50.0% | |
| GAACCGGAAACCGACGAAAT+AGG | + | 42850:2587-2606 | MS.gene59295:intergenic | 50.0% | |
| GAACGGCTTGCGCATAAAGA+GGG | + | 42850:4209-4228 | MS.gene59295:intergenic | 50.0% | |
| GGCTGGAATGGTTCAGAATG+AGG | - | 42850:3774-3793 | MS.gene59295:CDS | 50.0% | |
| GTTCTCATCTCCTCCCAAAG+AGG | + | 42850:3901-3920 | MS.gene59295:intergenic | 50.0% | |
| TAAATGCCGCTGACCATGCA+GGG | + | 42850:4011-4030 | MS.gene59295:intergenic | 50.0% | |
| TCGATGTTTGCCTCTTTGGG+AGG | - | 42850:3888-3907 | MS.gene59295:CDS | 50.0% | |
| TGAACGGCTTGCGCATAAAG+AGG | + | 42850:4210-4229 | MS.gene59295:intergenic | 50.0% | |
| TGCTAGAGAAGTGGCTGGAA+TGG | - | 42850:3762-3781 | MS.gene59295:CDS | 50.0% | |
| TTCAGGATATAGAGGCGGAG+AGG | - | 42850:3854-3873 | MS.gene59295:CDS | 50.0% | |
| ! | AGGAAGTTGTTTGAGACGCG+AGG | - | 42850:3015-3034 | MS.gene59295:CDS | 50.0% |
| ! | CTTTAGGGAAGATAGCGGTG+AGG | - | 42850:4325-4344 | MS.gene59295:CDS | 50.0% |
| ! | GAGACTGTGACTGGTGTTAG+TGG | - | 42850:3322-3341 | MS.gene59295:CDS | 50.0% |
| ! | GGCATCCCTAATTTTCGCCT+CGG | + | 42850:3089-3108 | MS.gene59295:intergenic | 50.0% |
| ! | GTGTTGTGGTGGTGAGAGTT+TGG | - | 42850:3195-3214 | MS.gene59295:CDS | 50.0% |
| ! | GTTTTGTGGGAGACTGTGAC+TGG | - | 42850:3313-3332 | MS.gene59295:CDS | 50.0% |
| ! | TGTGATGGAGGACGCGTTTA+AGG | - | 42850:3717-3736 | MS.gene59295:CDS | 50.0% |
| ! | TGTTTGAGACGCGAGGTTTC+CGG | - | 42850:3022-3041 | MS.gene59295:CDS | 50.0% |
| AAAAGGCGGTGTTTACCGGC+GGG | - | 42850:3260-3279 | MS.gene59295:CDS | 55.0% | |
| CAATGTCGTCGAAGGACCAG+TGG | - | 42850:3948-3967 | MS.gene59295:CDS | 55.0% | |
| CGGTGAAACCGGAACTGAAC+CGG | + | 42850:2561-2580 | MS.gene59295:intergenic | 55.0% | |
| CGGTTCAGTTCCGGTTTCAC+CGG | - | 42850:2559-2578 | MS.gene59295:CDS | 55.0% | |
| GAAAAGGCGGTGTTTACCGG+CGG | - | 42850:3259-3278 | MS.gene59295:CDS | 55.0% | |
| GGTGAAACCGGAACTGAACC+GGG | + | 42850:2560-2579 | MS.gene59295:intergenic | 55.0% | |
| GTCCGTGTTTCCGATGCTTG+AGG | - | 42850:3660-3679 | MS.gene59295:CDS | 55.0% | |
| TGCAGGAGATGGAGTATGGC+GGG | - | 42850:3590-3609 | MS.gene59295:CDS | 55.0% | |
| AAAGGCGGTGTTTACCGGCG+GGG | - | 42850:3261-3280 | MS.gene59295:CDS | 60.0% | |
| CTACCACCCTGCATGGTCAG+CGG | - | 42850:4002-4021 | MS.gene59295:CDS | 60.0% | |
| ! | CCTAGCATCGAGCCTTGGAC+CGG | + | 42850:3044-3063 | MS.gene59295:intergenic | 60.0% |
| !! | CGTCGGTTTCCGGTTCGAAC+CGG | - | 42850:2591-2610 | MS.gene59295:CDS | 60.0% |
| AAGGCGGTGTTTACCGGCGG+GGG | - | 42850:3262-3281 | MS.gene59295:CDS | 65.0% | |
| ATGCCGCTGACCATGCAGGG+TGG | + | 42850:4008-4027 | MS.gene59295:intergenic | 65.0% | |
| CCGGTCCAAGGCTCGATGCT+AGG | - | 42850:3041-3060 | MS.gene59295:CDS | 65.0% | |
| CGAATTCACCACTCCCCCGC+CGG | + | 42850:3278-3297 | MS.gene59295:intergenic | 65.0% | |
| GACGCGAGGTTTCCGGTCCA+AGG | - | 42850:3029-3048 | MS.gene59295:CDS | 65.0% | |
| GAGGCGGAGAGGCCGTTGAT+AGG | - | 42850:3865-3884 | MS.gene59295:CDS | 65.0% | |
| GGTGTTTACCGGCGGGGGAG+TGG | - | 42850:3267-3286 | MS.gene59295:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 42850 | gene | 2236 | 4599 | 2236 | ID=MS.gene59295 |
| 42850 | mRNA | 2236 | 4599 | 2236 | ID=MS.gene59295.t1;Parent=MS.gene59295 |
| 42850 | exon | 2236 | 4599 | 2236 | ID=MS.gene59295.t1.exon1;Parent=MS.gene59295.t1 |
| 42850 | CDS | 2236 | 4599 | 2236 | ID=cds.MS.gene59295.t1;Parent=MS.gene59295.t1 |
| Gene Sequence |
| Protein sequence |
