AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62781


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62781.t1 MTR_8g005990 96.907 291 9 0 1 291 88 378 0.0 588
MS.gene62781.t1 MTR_8g005990 96.907 291 9 0 1 291 111 401 0.0 587
MS.gene62781.t1 MTR_1g014040 68.729 291 90 1 2 291 119 409 1.03e-152 433
MS.gene62781.t1 MTR_3g046330 45.745 282 152 1 2 283 85 365 1.59e-87 266
MS.gene62781.t1 MTR_8g010580 48.571 280 143 1 7 285 91 370 1.65e-85 261
MS.gene62781.t1 MTR_8g010580 49.187 246 125 0 7 252 91 336 2.04e-76 236
MS.gene62781.t1 MTR_8g010580 48.707 232 119 0 7 238 91 322 2.83e-70 220
MS.gene62781.t1 MTR_8g103840 33.101 287 168 9 6 273 10 291 1.94e-37 134
MS.gene62781.t1 MTR_8g103840 32.872 289 170 9 4 273 24 307 1.98e-37 135
MS.gene62781.t1 MTR_8g103840 32.872 289 170 9 4 273 85 368 6.35e-37 135
MS.gene62781.t1 MTR_8g103840 33.101 287 168 9 6 273 124 405 1.55e-36 135
MS.gene62781.t1 MTR_8g103840 32.576 264 154 9 29 273 1 259 2.24e-30 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62781.t1 AT4G31810 65.862 290 96 1 5 291 120 409 7.07e-146 416
MS.gene62781.t1 AT3G60510 67.474 289 94 0 2 290 113 401 5.97e-144 410
MS.gene62781.t1 AT3G60510 62.102 314 94 1 2 290 113 426 2.23e-138 397
MS.gene62781.t1 AT5G65940 49.110 281 142 1 6 286 89 368 6.90e-97 290
MS.gene62781.t1 AT5G65940 49.110 281 142 1 6 286 89 368 6.90e-97 290
MS.gene62781.t1 AT3G60510 65.686 204 70 0 2 205 113 316 2.86e-93 279
MS.gene62781.t1 AT2G30650 48.057 283 145 1 6 286 85 367 4.99e-93 280
MS.gene62781.t1 AT2G30660 49.621 264 133 0 7 270 86 349 2.84e-92 278
MS.gene62781.t1 AT2G30660 49.621 264 133 0 7 270 54 317 3.02e-92 277
MS.gene62781.t1 AT5G65940 49.798 247 124 0 6 252 89 335 3.80e-86 261
MS.gene62781.t1 AT1G06550 42.199 282 163 0 2 283 85 366 6.37e-83 254
MS.gene62781.t1 AT5G65940 48.523 237 122 0 6 242 89 325 5.47e-80 245
MS.gene62781.t1 AT2G30650 48.101 237 123 0 6 242 85 321 4.91e-77 238
MS.gene62781.t1 AT4G13360 32.660 297 173 10 4 281 129 417 2.53e-42 150
MS.gene62781.t1 AT3G24360 32.082 293 172 10 6 277 24 310 1.15e-38 138
MS.gene62781.t1 AT3G24360 31.525 295 175 10 4 277 24 312 3.08e-38 137
MS.gene62781.t1 AT3G24360 31.741 293 173 10 6 277 3 289 3.54e-38 136
MS.gene62781.t1 AT3G24360 31.525 295 175 10 4 277 126 414 2.39e-37 137
MS.gene62781.t1 AT3G24360 31.741 293 173 10 6 277 124 410 2.83e-37 137
MS.gene62781.t1 AT3G24360 33.333 192 117 6 5 187 127 316 9.89e-20 88.2

Find 78 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTCTTTAAGTCTATTT+AGG 0.111977 8.4:+80794479 None:intergenic
GCGACCCCTGAAATTCTTAT+TGG 0.185040 8.4:-80798061 MS.gene62781:CDS
TGAAGAACAGCTTGGGAAAT+TGG 0.217628 8.4:-80796415 MS.gene62781:CDS
GCAATTTCTAAACAGATATC+TGG 0.230533 8.4:-80794244 MS.gene62781:CDS
TGAAATCCAATAAGAATTTC+AGG 0.232091 8.4:+80798055 None:intergenic
AGCTTCTTTAAGTCTATTTA+GGG 0.315411 8.4:+80794480 None:intergenic
CCAAGCTGTTCTTCAATTAG+TGG 0.321509 8.4:+80796423 None:intergenic
GGAAAAGGTTTCTCAAGATA+TGG 0.340105 8.4:-80793907 MS.gene62781:CDS
TCAGGTTCAAATTCAGTTAG+AGG 0.341063 8.4:+80793867 None:intergenic
GCAGTGGGATCCTCCAACTT+TGG 0.373532 8.4:-80793928 MS.gene62781:intron
TTTGTGGGTAACTCTAAATC+AGG 0.392416 8.4:+80793849 None:intergenic
GAAATTCTAGATAAATGCTT+TGG 0.392714 8.4:-80796016 MS.gene62781:CDS
ATTACCATGGGTGGTGGGGC+AGG 0.398663 8.4:-80798780 MS.gene62781:CDS
GGAGAGTACTTGGCTCTGAC+TGG 0.403299 8.4:-80796617 MS.gene62781:CDS
AGCTTCTCCATTGAGCTTGA+AGG 0.426243 8.4:-80794461 MS.gene62781:CDS
TGTAGTACACTACTGCGGCC+TGG 0.431132 8.4:+80796333 None:intergenic
CACTAATTGAAGAACAGCTT+GGG 0.439000 8.4:-80796422 MS.gene62781:CDS
CTCCAGGTAGCTCTTCTCAA+TGG 0.450877 8.4:-80798804 MS.gene62781:intron
AATGGCATTACCATGGGTGG+TGG 0.452416 8.4:-80798786 MS.gene62781:CDS
AGAAATGCACCATGCATCCT+TGG 0.460714 8.4:+80794504 None:intergenic
GAAACCACTTTAGAACAGTA+TGG 0.461406 8.4:-80796369 MS.gene62781:CDS
AAGGAAACCTTCAAGCTCAA+TGG 0.465743 8.4:+80794454 None:intergenic
CGCGCAACAAGCACTGATCA+AGG 0.466530 8.4:+80794287 None:intergenic
GGATCCTCCAACTTTGGAAA+AGG 0.471727 8.4:-80793922 MS.gene62781:CDS
GTAGTACACTACTGCGGCCT+GGG 0.475897 8.4:+80796334 None:intergenic
GTTGTATGCAGGAGAGTACT+TGG 0.476068 8.4:-80796627 MS.gene62781:intron
GGGGCAGGAATTTCAATCCC+TGG 0.494304 8.4:-80798765 MS.gene62781:CDS
CAATTTCTAAACAGATATCT+GGG 0.502985 8.4:-80794243 MS.gene62781:CDS
AGTGCTTGTTGCGCGAGTAC+CGG 0.503659 8.4:-80794279 MS.gene62781:CDS
AAATTGCTTGTAAAGTCATC+CGG 0.507974 8.4:+80794260 None:intergenic
GTTGCAAGTCGGAATGTCCC+AGG 0.508371 8.4:+80798747 None:intergenic
AAAGTGGTTTCTATGACAGA+TGG 0.510254 8.4:+80796381 None:intergenic
GAGAGTACTTGGCTCTGACT+GGG 0.511332 8.4:-80796616 MS.gene62781:CDS
CCACTAATTGAAGAACAGCT+TGG 0.512272 8.4:-80796423 MS.gene62781:CDS
ATGGCATTACCATGGGTGGT+GGG 0.515533 8.4:-80798785 MS.gene62781:CDS
ATCACCATACTGTTCTAAAG+TGG 0.531202 8.4:+80796365 None:intergenic
TGAAGAGATTGTTGATGCAT+TGG 0.532230 8.4:-80795981 MS.gene62781:intron
GAAATCCAATAAGAATTTCA+GGG 0.534007 8.4:+80798056 None:intergenic
CTCAATGGCATTACCATGGG+TGG 0.535280 8.4:-80798789 MS.gene62781:CDS
TTCCAATAGGAAGTTGCCGC+AGG 0.536254 8.4:-80794532 MS.gene62781:intron
GGGAGTGAGGGCACGTGTAG+TGG 0.536535 8.4:-80794127 MS.gene62781:CDS
AATTTCCTTATAGGGAGTGA+GGG 0.555093 8.4:-80794139 MS.gene62781:intron
AATTCCTGCCCCACCACCCA+TGG 0.559916 8.4:+80798776 None:intergenic
TGCATCCTTGGTTTCACCTG+CGG 0.562087 8.4:+80794516 None:intergenic
CAGGTGAAACCAAGGATGCA+TGG 0.564859 8.4:-80794513 MS.gene62781:CDS
GAATTTCCTTATAGGGAGTG+AGG 0.566187 8.4:-80794140 MS.gene62781:intron
CTTCTCAATGGCATTACCAT+GGG 0.568968 8.4:-80798792 MS.gene62781:CDS
GGGCAGGAATTTCAATCCCT+GGG 0.570054 8.4:-80798764 MS.gene62781:CDS
TGGCATTACCATGGGTGGTG+GGG 0.573172 8.4:-80798784 MS.gene62781:CDS
ACGTGTAGTGGACAAGGACA+TGG 0.574921 8.4:-80794115 MS.gene62781:CDS
AAAGGAACTCACAGATCTCA+AGG 0.582810 8.4:+80794435 None:intergenic
AAAGCTCAACGGAGTAGAGA+TGG 0.584222 8.4:-80796591 MS.gene62781:CDS
TTCTATGACAGATGGGTCGT+CGG 0.588045 8.4:+80796389 None:intergenic
CAATCTCTTCAACTGTGTCA+TGG 0.589006 8.4:+80795993 None:intergenic
TCTTCTCAATGGCATTACCA+TGG 0.598018 8.4:-80798793 MS.gene62781:CDS
AAGTGGTTTCTATGACAGAT+GGG 0.600276 8.4:+80796382 None:intergenic
AAAGGTTTCTCAAGATATGG+TGG 0.602459 8.4:-80793904 MS.gene62781:CDS
GGACAAGGACATGGCCCCAA+AGG 0.605853 8.4:-80794106 MS.gene62781:intron
TGTGACCAGGTAGACGTGAA+AGG 0.610304 8.4:+80798008 None:intergenic
GCGCAACAAGCACTGATCAA+GGG 0.615691 8.4:+80794288 None:intergenic
TCACGTCTACCTGGTCACAT+AGG 0.617502 8.4:-80798004 MS.gene62781:intron
GGAGTAGAGATGGTTGCATG+TGG 0.628211 8.4:-80796581 MS.gene62781:CDS
AGAGTACTTGGCTCTGACTG+GGG 0.633308 8.4:-80796615 MS.gene62781:CDS
TTGCAAGTCGGAATGTCCCA+GGG 0.633890 8.4:+80798748 None:intergenic
GAGGGCACGTGTAGTGGACA+AGG 0.637439 8.4:-80794121 MS.gene62781:CDS
TATTTGGGATAGATACGAGA+AGG 0.644999 8.4:-80794322 MS.gene62781:intron
CTGACTGGGGAAAAGCTCAA+CGG 0.647916 8.4:-80796602 MS.gene62781:CDS
GCACATAAATGGTACCTTTG+GGG 0.649601 8.4:+80794092 None:intergenic
GAGTAGAGATGGTTGCATGT+GGG 0.656634 8.4:-80796580 MS.gene62781:CDS
AGTTGCCGCAGGTGAAACCA+AGG 0.659546 8.4:-80794521 MS.gene62781:CDS
AAATCCAATAAGAATTTCAG+GGG 0.668222 8.4:+80798057 None:intergenic
GCCGCAGTAGTGTACTACAA+AGG 0.697751 8.4:-80796329 MS.gene62781:intron
GCTTCAGATATGTACCAATG+AGG 0.698029 8.4:+80798930 None:intergenic
GATATCTGGGGACTTCTGTG+AGG 0.705454 8.4:-80794230 MS.gene62781:intron
TATGGTGATCTTGTACACCC+AGG 0.707552 8.4:-80796351 MS.gene62781:CDS
ATAATATTACCTATGTGACC+AGG 0.714051 8.4:+80797995 None:intergenic
AATTTCTAAACAGATATCTG+GGG 0.714068 8.4:-80794242 MS.gene62781:CDS
ACCTTTGTAGTACACTACTG+CGG 0.731986 8.4:+80796328 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATGAAAAAAGAAATA+GGG + chr8.4:80796293-80796312 None:intergenic 10.0%
!!! TGAATTTTTATATATAAACA+GGG + chr8.4:80798813-80798832 None:intergenic 10.0%
!!! TTGAATTTTTATATATAAAC+AGG + chr8.4:80798814-80798833 None:intergenic 10.0%
!! AAAAAAATAATGCACATAAA+TGG + chr8.4:80798726-80798745 None:intergenic 15.0%
!! AAAATTTGTAAATTGGAATT+TGG - chr8.4:80794564-80794583 MS.gene62781:intron 15.0%
!! ATAATGTAATCAATCTATTT+GGG - chr8.4:80798467-80798486 MS.gene62781:intron 15.0%
!! ATAATTTAGCATAAAAAAAC+AGG + chr8.4:80793966-80793985 None:intergenic 15.0%
!! GAATTAATGAAAAAAGAAAT+AGG + chr8.4:80796294-80796313 None:intergenic 15.0%
!! TATAATGTAATCAATCTATT+TGG - chr8.4:80798466-80798485 MS.gene62781:intron 15.0%
!! TCAATTATGTTAAAAATAAG+AGG + chr8.4:80796061-80796080 None:intergenic 15.0%
!! TGTTAATATCAAATCATAAA+TGG - chr8.4:80794526-80794545 MS.gene62781:CDS 15.0%
!!! AAAAAATCTTTGAAAGTTAA+GGG + chr8.4:80795408-80795427 None:intergenic 15.0%
!!! AATAATGATCATTTTTAAAG+AGG + chr8.4:80796638-80796657 None:intergenic 15.0%
!!! ATATTTTCCTATTTTTCATT+TGG + chr8.4:80796919-80796938 None:intergenic 15.0%
!!! ATCATTTTTAAATTTCCAAT+AGG - chr8.4:80798259-80798278 MS.gene62781:intron 15.0%
!!! TAAAAAATCTTTGAAAGTTA+AGG + chr8.4:80795409-80795428 None:intergenic 15.0%
!!! TTAACTTTCAAAGATTTTTT+AGG - chr8.4:80795408-80795427 MS.gene62781:intron 15.0%
!!! TTAATTTGAATTTCCTTATA+GGG - chr8.4:80798657-80798676 MS.gene62781:intron 15.0%
!!! TTTTCAGATTTAAAATTCAT+TGG - chr8.4:80798752-80798771 MS.gene62781:CDS 15.0%
!! AAAAAGAACAAAGCAATAAA+AGG + chr8.4:80795607-80795626 None:intergenic 20.0%
!! AATACTTGATGTGATAAATA+AGG + chr8.4:80795985-80796004 None:intergenic 20.0%
!! ATAAGCTTCTATATTACTAA+AGG + chr8.4:80794241-80794260 None:intergenic 20.0%
!! GGAACAAAAAATTTGTAAAT+TGG - chr8.4:80794557-80794576 MS.gene62781:intron 20.0%
!! GTTTGCTTAATTGTATTATT+GGG - chr8.4:80794381-80794400 MS.gene62781:intron 20.0%
!! TAGGTAAGTATATATATTTG+TGG - chr8.4:80797980-80797999 MS.gene62781:intron 20.0%
!! TATGAAATAATTGAGAATGA+TGG + chr8.4:80793924-80793943 None:intergenic 20.0%
!! TGTTTGCTTAATTGTATTAT+TGG - chr8.4:80794380-80794399 MS.gene62781:intron 20.0%
!! TTACAAGTTCATAGAATTAT+TGG - chr8.4:80795866-80795885 MS.gene62781:intron 20.0%
!!! AATTTATATCATTGCTGTTT+AGG + chr8.4:80795895-80795914 None:intergenic 20.0%
!!! ACAATATTTTGCTATAATCA+GGG - chr8.4:80795704-80795723 MS.gene62781:intron 20.0%
!!! ATTTATTTATACTTTTCTCC+AGG - chr8.4:80793984-80794003 MS.gene62781:intron 20.0%
!!! ATTTTAAAACCCCTAATTAT+TGG + chr8.4:80797114-80797133 None:intergenic 20.0%
!!! CAAGTTTTGACAATTTTATA+TGG - chr8.4:80794997-80795016 MS.gene62781:intron 20.0%
!!! GTTAATTTGAATTTCCTTAT+AGG - chr8.4:80798656-80798675 MS.gene62781:intron 20.0%
!!! TACAATATTTTGCTATAATC+AGG - chr8.4:80795703-80795722 MS.gene62781:intron 20.0%
!!! TAGAACAAAAAGATATGTTT+TGG - chr8.4:80798155-80798174 MS.gene62781:intron 20.0%
!!! TATACTTTTATATACCTCAT+TGG - chr8.4:80793860-80793879 MS.gene62781:CDS 20.0%
!!! TTGTCATATGTGATAATTTT+TGG - chr8.4:80798047-80798066 MS.gene62781:CDS 20.0%
!!! TTTCCTCTTTTGTTAATTTA+GGG + chr8.4:80796945-80796964 None:intergenic 20.0%
!!! TTTTTAGGAAAAATCTTATC+TGG - chr8.4:80795423-80795442 MS.gene62781:intron 20.0%
! AAACATGTTAAAGCTAACTT+TGG + chr8.4:80797824-80797843 None:intergenic 25.0%
! AAATCCAATAAGAATTTCAG+GGG + chr8.4:80794750-80794769 None:intergenic 25.0%
! AACAATTAACAAATACCCTT+AGG - chr8.4:80796877-80796896 MS.gene62781:intron 25.0%
! AAGCTTCTTTAAGTCTATTT+AGG + chr8.4:80798328-80798347 None:intergenic 25.0%
! AATTTCTAAACAGATATCTG+GGG - chr8.4:80798562-80798581 MS.gene62781:intron 25.0%
! ACAAATATAGAAAACGAAGA+GGG + chr8.4:80797547-80797566 None:intergenic 25.0%
! ACAGGTATAAAACGTAAATA+TGG + chr8.4:80795159-80795178 None:intergenic 25.0%
! AGAGATGAAAATTAGAAGAA+GGG + chr8.4:80795661-80795680 None:intergenic 25.0%
! AGCTTCTTTAAGTCTATTTA+GGG + chr8.4:80798327-80798346 None:intergenic 25.0%
! ATACATAAATAATGAGCAAG+AGG + chr8.4:80794109-80794128 None:intergenic 25.0%
! ATCAAATCATAAATGGAAAG+CGG - chr8.4:80794533-80794552 MS.gene62781:intron 25.0%
! ATGAACAAAATCAATCAAAG+TGG + chr8.4:80795090-80795109 None:intergenic 25.0%
! CAATTTCTAAACAGATATCT+GGG - chr8.4:80798561-80798580 MS.gene62781:intron 25.0%
! CTATAGGACAAAATAAAAGA+AGG + chr8.4:80796355-80796374 None:intergenic 25.0%
! CTATATTACTAAAGGTAATG+CGG + chr8.4:80794233-80794252 None:intergenic 25.0%
! GAAATCCAATAAGAATTTCA+GGG + chr8.4:80794751-80794770 None:intergenic 25.0%
! GAAATTCTAGATAAATGCTT+TGG - chr8.4:80796788-80796807 MS.gene62781:intron 25.0%
! GATATGCATTGTATAAATCT+TGG - chr8.4:80794671-80794690 MS.gene62781:intron 25.0%
! GTATAAACATTGTGAATTTC+TGG - chr8.4:80798596-80798615 MS.gene62781:intron 25.0%
! GTGAATTAAATATATGCAGT+GGG - chr8.4:80798861-80798880 MS.gene62781:intron 25.0%
! GTTCAACAACATCATAATTT+AGG + chr8.4:80797674-80797693 None:intergenic 25.0%
! TAAGTATATATATTTGTGGC+TGG - chr8.4:80797984-80798003 MS.gene62781:intron 25.0%
! TCATCAATTACATCTTCAAT+TGG + chr8.4:80796120-80796139 None:intergenic 25.0%
! TGAAATCCAATAAGAATTTC+AGG + chr8.4:80794752-80794771 None:intergenic 25.0%
! TGATGAAAGAATTGCTTAAT+AGG - chr8.4:80796031-80796050 MS.gene62781:intron 25.0%
! TGCAAAGAAGAAATTGTATT+AGG + chr8.4:80798778-80798797 None:intergenic 25.0%
! TGTGAATTAAATATATGCAG+TGG - chr8.4:80798860-80798879 MS.gene62781:intron 25.0%
! TGTTGTAAAAAATTGTTTGC+AGG + chr8.4:80793837-80793856 None:intergenic 25.0%
! TTTAAGAGTCCAATAATTAG+GGG - chr8.4:80797102-80797121 MS.gene62781:intron 25.0%
! TTTCCCTAAATTAACAAAAG+AGG - chr8.4:80796939-80796958 MS.gene62781:intron 25.0%
!! ATTGTTGTTATCTGTAAGTT+AGG - chr8.4:80794142-80794161 MS.gene62781:intron 25.0%
!! ATTTATGTATTTTCCTTTCG+TGG - chr8.4:80794119-80794138 MS.gene62781:CDS 25.0%
!! ATTTTGTAAAGAAGAGTTTG+TGG + chr8.4:80797579-80797598 None:intergenic 25.0%
!! CTATTTTCTTATCTTCTTTC+AGG + chr8.4:80796667-80796686 None:intergenic 25.0%
!! CTTTAAGAGTCCAATAATTA+GGG - chr8.4:80797101-80797120 MS.gene62781:intron 25.0%
!! CTTTCCTCTTTTGTTAATTT+AGG + chr8.4:80796946-80796965 None:intergenic 25.0%
!! TCATCATAGAATGATAGTTT+TGG - chr8.4:80795182-80795201 MS.gene62781:intron 25.0%
!! TCTTTAAGAGTCCAATAATT+AGG - chr8.4:80797100-80797119 MS.gene62781:intron 25.0%
!! TGATTGATGAGAAATTTTCA+TGG - chr8.4:80796078-80796097 MS.gene62781:intron 25.0%
!! TTAGTCTTTCTTTGTTTCAT+TGG - chr8.4:80796149-80796168 MS.gene62781:intron 25.0%
!!! AAAGTTAGCTTTAACATGTT+TGG - chr8.4:80797823-80797842 MS.gene62781:intron 25.0%
!!! AAGCCAAATAGAGAATTTTT+TGG - chr8.4:80797453-80797472 MS.gene62781:intron 25.0%
!!! AATTCTCTATTTGGCTTTTT+TGG + chr8.4:80797450-80797469 None:intergenic 25.0%
!!! ACTTTGATTGATTTTGTTCA+TGG - chr8.4:80795089-80795108 MS.gene62781:intron 25.0%
!!! AGCCAAATAGAGAATTTTTT+GGG - chr8.4:80797454-80797473 MS.gene62781:intron 25.0%
!!! ATTCTCTATTTGGCTTTTTT+GGG + chr8.4:80797449-80797468 None:intergenic 25.0%
!!! CAATATTTTGCTATAATCAG+GGG - chr8.4:80795705-80795724 MS.gene62781:intron 25.0%
!!! TAACTAGTTTGTCTTCATTT+TGG - chr8.4:80794644-80794663 MS.gene62781:intron 25.0%
!!! TCTAGTTTTCTACTTAACAT+AGG - chr8.4:80795759-80795778 MS.gene62781:intron 25.0%
!!! TCTTTGTTTTGATTTGAAGA+TGG + chr8.4:80796613-80796632 None:intergenic 25.0%
!!! TCTTTTATTTTGTCCTATAG+AGG - chr8.4:80796355-80796374 MS.gene62781:CDS 25.0%
!!! TTACTATGCTTTTAGAGTTT+AGG + chr8.4:80797929-80797948 None:intergenic 25.0%
!!! TTCTTTTTGTTTTCTGTTCA+CGG - chr8.4:80795619-80795638 MS.gene62781:intron 25.0%
AAACAAAGAAAGACTAACAG+AGG + chr8.4:80796146-80796165 None:intergenic 30.0%
AAATCAGATTGTTGAGATCT+GGG - chr8.4:80797706-80797725 MS.gene62781:intron 30.0%
AAATTGCTTGTAAAGTCATC+CGG + chr8.4:80798547-80798566 None:intergenic 30.0%
AATAGAGACTTCAATTTGAG+AGG - chr8.4:80798088-80798107 MS.gene62781:intron 30.0%
AATTACAGTTTAACCTAACG+TGG + chr8.4:80796982-80797001 None:intergenic 30.0%
ACAAAGCAATAAAAGGAACT+AGG + chr8.4:80795600-80795619 None:intergenic 30.0%
AGGTGATGTGTTAGTAAAAA+AGG + chr8.4:80797496-80797515 None:intergenic 30.0%
AGTGATCAGTTCATTTAAAC+TGG - chr8.4:80795236-80795255 MS.gene62781:intron 30.0%
AGTTTCAACAACAGTAGAAT+TGG + chr8.4:80797884-80797903 None:intergenic 30.0%
ATAATATTACCTATGTGACC+AGG + chr8.4:80794812-80794831 None:intergenic 30.0%
ATAGCATATCTGCTTCTAAA+CGG + chr8.4:80797171-80797190 None:intergenic 30.0%
ATAGTTAGTATACTCACATG+CGG + chr8.4:80793899-80793918 None:intergenic 30.0%
ATCATTCTATGATGAAGAAC+AGG + chr8.4:80795177-80795196 None:intergenic 30.0%
ATGATGTTGTTGAACATTAC+AGG - chr8.4:80797679-80797698 MS.gene62781:intron 30.0%
CAAATATAGAAAACGAAGAG+GGG + chr8.4:80797546-80797565 None:intergenic 30.0%
CTTAAGGTTAGTGTTAGTTA+TGG - chr8.4:80795731-80795750 MS.gene62781:intron 30.0%
GAAAAGAAGAGAAAGAAAAC+AGG + chr8.4:80798425-80798444 None:intergenic 30.0%
GAAGACAAACTAGTTAAACT+AGG + chr8.4:80794640-80794659 None:intergenic 30.0%
GACAAATATAGAAAACGAAG+AGG + chr8.4:80797548-80797567 None:intergenic 30.0%
GAGAGATGAAAATTAGAAGA+AGG + chr8.4:80795662-80795681 None:intergenic 30.0%
GATTACATTATAGAAGCAGT+TGG + chr8.4:80798458-80798477 None:intergenic 30.0%
GCAATTTCTAAACAGATATC+TGG - chr8.4:80798560-80798579 MS.gene62781:intron 30.0%
GGTGATGTGTTAGTAAAAAA+GGG + chr8.4:80797495-80797514 None:intergenic 30.0%
GTAATTTCAGTTGACAATCA+GGG - chr8.4:80797372-80797391 MS.gene62781:intron 30.0%
GTGATAAGTTATAGCTAAGT+CGG + chr8.4:80794706-80794725 None:intergenic 30.0%
GTGATCAGTTCATTTAAACT+GGG - chr8.4:80795237-80795256 MS.gene62781:intron 30.0%
GTGATTTCAGAATATGTTAG+TGG - chr8.4:80794176-80794195 MS.gene62781:intron 30.0%
GTTAAAGCTAACTTTGGATA+TGG + chr8.4:80797818-80797837 None:intergenic 30.0%
TAATTTCAGTTGACAATCAG+GGG - chr8.4:80797373-80797392 MS.gene62781:intron 30.0%
TATAATCCAAAGTCCTACAT+CGG + chr8.4:80794287-80794306 None:intergenic 30.0%
TATGTGTTGTGACTTACATT+TGG - chr8.4:80798206-80798225 MS.gene62781:intron 30.0%
TCACAACACATACAAAAGAA+AGG + chr8.4:80798198-80798217 None:intergenic 30.0%
TCCCTCTTTAGCAAAATTTA+GGG + chr8.4:80797007-80797026 None:intergenic 30.0%
TGAAAATTAGAAGAAGGGAA+AGG + chr8.4:80795656-80795675 None:intergenic 30.0%
TGATGTTGTTGAACATTACA+GGG - chr8.4:80797680-80797699 MS.gene62781:intron 30.0%
TGATTTGAAGATGGAAAGAA+AGG + chr8.4:80796604-80796623 None:intergenic 30.0%
TGCCCAAAAAATTCTCTATT+TGG + chr8.4:80797459-80797478 None:intergenic 30.0%
TGTAATTTCAGTTGACAATC+AGG - chr8.4:80797371-80797390 MS.gene62781:intron 30.0%
TGTAGGACTTTGGATTATAT+AGG - chr8.4:80794288-80794307 MS.gene62781:CDS 30.0%
TTATCTGTAAGTTAGGACTT+AGG - chr8.4:80794149-80794168 MS.gene62781:intron 30.0%
TTCCCTCTTTAGCAAAATTT+AGG + chr8.4:80797008-80797027 None:intergenic 30.0%
TTGAATAAAATGCTCAGAGA+AGG + chr8.4:80795384-80795403 None:intergenic 30.0%
TTGTAAATTGGAATTTGGAG+TGG - chr8.4:80794569-80794588 MS.gene62781:intron 30.0%
! ACCCTAAATTTTGCTAAAGA+GGG - chr8.4:80797003-80797022 MS.gene62781:intron 30.0%
! ATTACAACTAAGAGCTTTAG+TGG + chr8.4:80797213-80797232 None:intergenic 30.0%
! CAACACATTTCTGCATTTTT+AGG - chr8.4:80795483-80795502 MS.gene62781:intron 30.0%
! CTTTAACTTAAAGCAGAAGA+TGG + chr8.4:80794856-80794875 None:intergenic 30.0%
! GCTTTTGCCAAATGAAAAAT+AGG - chr8.4:80796909-80796928 MS.gene62781:intron 30.0%
! GTTTTCTACTTAACATAGGT+TGG - chr8.4:80795763-80795782 MS.gene62781:intron 30.0%
! TACCCTAAATTTTGCTAAAG+AGG - chr8.4:80797002-80797021 MS.gene62781:intron 30.0%
!! AAGAGTCTTATTGGTACAAT+CGG - chr8.4:80795112-80795131 MS.gene62781:intron 30.0%
!! CAAGTCATAGTCTTGTAAAA+AGG + chr8.4:80795310-80795329 None:intergenic 30.0%
!! CTAAATTTTGAAGATTGACC+CGG + chr8.4:80795805-80795824 None:intergenic 30.0%
!!! ATGATAGTTTTGGCATTGTT+AGG - chr8.4:80795192-80795211 MS.gene62781:intron 30.0%
!!! GCTTCTACTTTTTTCTTTTC+AGG - chr8.4:80796762-80796781 MS.gene62781:intron 30.0%
!!! TAACTTATCACCTTTTTTGC+AGG - chr8.4:80794715-80794734 MS.gene62781:intron 30.0%
!!! TCTTTTTGTTTTCTGTTCAC+GGG - chr8.4:80795620-80795639 MS.gene62781:intron 30.0%
!!! TTCTCTATTTGGCTTTTTTG+GGG + chr8.4:80797448-80797467 None:intergenic 30.0%
AAAAGCTAATCAGTGCCTAA+GGG + chr8.4:80796895-80796914 None:intergenic 35.0%
AAAATTAGACCCAGGTAGAA+GGG - chr8.4:80797129-80797148 MS.gene62781:intron 35.0%
AAACTACACAAGTATGAGTG+TGG - chr8.4:80797899-80797918 MS.gene62781:intron 35.0%
AAAGGTTTCTCAAGATATGG+TGG - chr8.4:80798900-80798919 MS.gene62781:intron 35.0%
AAAGTGGTTTCTATGACAGA+TGG + chr8.4:80796426-80796445 None:intergenic 35.0%
AAATCATAAATGGAAAGCGG+TGG - chr8.4:80794536-80794555 MS.gene62781:intron 35.0%
AAGGTTAGTGTTAGTTATGG+TGG - chr8.4:80795734-80795753 MS.gene62781:intron 35.0%
AAGTGGTTTCTATGACAGAT+GGG + chr8.4:80796425-80796444 None:intergenic 35.0%
AATTCTTCTGGATTCCTCTA+TGG - chr8.4:80795353-80795372 MS.gene62781:intron 35.0%
AATTTCCTTATAGGGAGTGA+GGG - chr8.4:80798665-80798684 MS.gene62781:intron 35.0%
ACACATGTACTACTTTCGAT+AGG - chr8.4:80797961-80797980 MS.gene62781:intron 35.0%
AGACTTCAATTTGAGAGGAT+CGG - chr8.4:80798093-80798112 MS.gene62781:intron 35.0%
AGATAACAACAATCCACGAA+AGG + chr8.4:80794135-80794154 None:intergenic 35.0%
AGGAGAAGTCATCTATGTAA+AGG + chr8.4:80794470-80794489 None:intergenic 35.0%
ATAAGGCTGGATAATAGCAT+TGG + chr8.4:80795968-80795987 None:intergenic 35.0%
ATGCACATAAATGGTACCTT+TGG + chr8.4:80798717-80798736 None:intergenic 35.0%
ATGTGCTGTACAATTGTCAT+TGG + chr8.4:80794349-80794368 None:intergenic 35.0%
ATTAACATATATGTGCCAGC+TGG - chr8.4:80797242-80797261 MS.gene62781:intron 35.0%
CAAACTAGTTAAACTAGGAG+AGG + chr8.4:80794635-80794654 None:intergenic 35.0%
CAAATCAGATTGTTGAGATC+TGG - chr8.4:80797705-80797724 MS.gene62781:intron 35.0%
CAAGAGAAAGAGATGAAAGA+GGG + chr8.4:80795838-80795857 None:intergenic 35.0%
CACTAATTGAAGAACAGCTT+GGG - chr8.4:80796382-80796401 MS.gene62781:CDS 35.0%
CAGCTTGAATATGTGTAAGT+GGG - chr8.4:80797309-80797328 MS.gene62781:intron 35.0%
CTTGATGTGATAAATAAGGC+TGG + chr8.4:80795981-80796000 None:intergenic 35.0%
GACTTGTCTGAAAAAGAGTT+TGG - chr8.4:80795324-80795343 MS.gene62781:intron 35.0%
GATCTCTATGCACTTAAAGA+GGG - chr8.4:80794965-80794984 MS.gene62781:intron 35.0%
GATGTTGTTGAACATTACAG+GGG - chr8.4:80797681-80797700 MS.gene62781:intron 35.0%
GGAAAAGGTTTCTCAAGATA+TGG - chr8.4:80798897-80798916 MS.gene62781:intron 35.0%
GTTTAGAAGCAGATATGCTA+TGG - chr8.4:80797170-80797189 MS.gene62781:intron 35.0%
GTTTAGCGTCTATTTCGATA+TGG - chr8.4:80794431-80794450 MS.gene62781:intron 35.0%
TAAAATTAGACCCAGGTAGA+AGG - chr8.4:80797128-80797147 MS.gene62781:intron 35.0%
TAACTTAAAGCAGAAGATGG+AGG + chr8.4:80794853-80794872 None:intergenic 35.0%
TACCACTATCAACATTTGCT+TGG + chr8.4:80794320-80794339 None:intergenic 35.0%
TATTCAAGTCTAACCACGTT+AGG - chr8.4:80796966-80796985 MS.gene62781:intron 35.0%
TCACTTTATCTTTCCGATGT+AGG - chr8.4:80794271-80794290 MS.gene62781:CDS 35.0%
TCAGCTTGAATATGTGTAAG+TGG - chr8.4:80797308-80797327 MS.gene62781:intron 35.0%
TCAGGTTCAAATTCAGTTAG+AGG + chr8.4:80798940-80798959 None:intergenic 35.0%
TGAAGAGATTGTTGATGCAT+TGG - chr8.4:80796823-80796842 MS.gene62781:intron 35.0%
TGATCTCTATGCACTTAAAG+AGG - chr8.4:80794964-80794983 MS.gene62781:intron 35.0%
TGCACATAAATGGTACCTTT+GGG + chr8.4:80798716-80798735 None:intergenic 35.0%
TGCATAACATGTGATATCGA+TGG + chr8.4:80795945-80795964 None:intergenic 35.0%
TGGAATAGTTGTGCAATAAC+CGG - chr8.4:80795783-80795802 MS.gene62781:intron 35.0%
TGTAAAGAAGAGTTTGTGGT+AGG + chr8.4:80797575-80797594 None:intergenic 35.0%
TGTTCAATCCCTTTGCATAT+CGG + chr8.4:80795564-80795583 None:intergenic 35.0%
TTAGAAGAAGGGAAAGGATA+AGG + chr8.4:80795650-80795669 None:intergenic 35.0%
TTTGAGGAGGAAAAAAAACG+AGG + chr8.4:80797516-80797535 None:intergenic 35.0%
TTTGTGGGTAACTCTAAATC+AGG + chr8.4:80798958-80798977 None:intergenic 35.0%
! AGGCAATTCAAGTTCAGAAA+TGG - chr8.4:80795458-80795477 MS.gene62781:intron 35.0%
! GTTTGGAATCTGAATTCTTC+TGG - chr8.4:80795341-80795360 MS.gene62781:intron 35.0%
! TACCAAGCAAATGTTGATAG+TGG - chr8.4:80794315-80794334 MS.gene62781:intron 35.0%
! TATTTGGGATAGATACGAGA+AGG - chr8.4:80798482-80798501 MS.gene62781:intron 35.0%
! TGAGAAACCTTTTCCAAAGT+TGG + chr8.4:80798892-80798911 None:intergenic 35.0%
! TGTTCATGGAAGAGTCTTAT+TGG - chr8.4:80795103-80795122 MS.gene62781:intron 35.0%
! TTTGGATATGGCTTTGCTTT+GGG + chr8.4:80797806-80797825 None:intergenic 35.0%
!! ACATTTCTGCATTTTTAGGC+AGG - chr8.4:80795487-80795506 MS.gene62781:intron 35.0%
!! ACCTTTCTTTGGTGCTATAT+AGG - chr8.4:80795511-80795530 MS.gene62781:intron 35.0%
!! AGAGTCTTATTGGTACAATC+GGG - chr8.4:80795113-80795132 MS.gene62781:intron 35.0%
!! ATCACCATACTGTTCTAAAG+TGG + chr8.4:80796442-80796461 None:intergenic 35.0%
!! CCTTTCTTTGGTGCTATATA+GGG - chr8.4:80795512-80795531 MS.gene62781:intron 35.0%
!! GAAACCACTTTAGAACAGTA+TGG - chr8.4:80796435-80796454 MS.gene62781:intron 35.0%
!! TATTTTGCTATAATCAGGGG+TGG - chr8.4:80795708-80795727 MS.gene62781:intron 35.0%
!! TGGGAAAAGCATTATGTGTT+TGG - chr8.4:80794400-80794419 MS.gene62781:intron 35.0%
!!! AGATATGTTTTGGCTTCTCT+TGG - chr8.4:80798165-80798184 MS.gene62781:intron 35.0%
!!! CTTTTTGTTTTCTGTTCACG+GGG - chr8.4:80795621-80795640 MS.gene62781:intron 35.0%
!!! TGCATAATGCATGCTTTTTC+TGG - chr8.4:80797738-80797757 MS.gene62781:intron 35.0%
AAAACAGGAGATTCGATACG+AGG + chr8.4:80793951-80793970 None:intergenic 40.0%
AAAGGAACTCACAGATCTCA+AGG + chr8.4:80798372-80798391 None:intergenic 40.0%
AAGAGAAAGACGGTAACTGA+GGG + chr8.4:80797624-80797643 None:intergenic 40.0%
AAGGAAACCTTCAAGCTCAA+TGG + chr8.4:80798353-80798372 None:intergenic 40.0%
ACATTATAGAAGCAGTTGGC+TGG + chr8.4:80798454-80798473 None:intergenic 40.0%
ACCTTTGTAGTACACTACTG+CGG + chr8.4:80796479-80796498 None:intergenic 40.0%
AGACAAACCCCATGTTTGTA+TGG + chr8.4:80798013-80798032 None:intergenic 40.0%
AGATGTTAATTATGGCCAGC+TGG + chr8.4:80797260-80797279 None:intergenic 40.0%
AGTCATCTCCGATATGCAAA+GGG - chr8.4:80795553-80795572 MS.gene62781:intron 40.0%
AGTCGACAGAATGTTCTCTT+TGG - chr8.4:80796701-80796720 MS.gene62781:intron 40.0%
ATACTTCCACTAGGCAATCA+GGG + chr8.4:80797420-80797439 None:intergenic 40.0%
ATATGCTATGGCTTACTAGC+TGG - chr8.4:80797182-80797201 MS.gene62781:intron 40.0%
ATCTTTCCGATGTAGGACTT+TGG - chr8.4:80794278-80794297 MS.gene62781:CDS 40.0%
CAAAAGCTAATCAGTGCCTA+AGG + chr8.4:80796896-80796915 None:intergenic 40.0%
CAATCTCTTCAACTGTGTCA+TGG + chr8.4:80796814-80796833 None:intergenic 40.0%
CAATTAGTGGAAGCCTCTAT+AGG + chr8.4:80796371-80796390 None:intergenic 40.0%
CACTCAAATATGGTGCAGAA+AGG + chr8.4:80794490-80794509 None:intergenic 40.0%
CCAAGCTGTTCTTCAATTAG+TGG + chr8.4:80796384-80796403 None:intergenic 40.0%
CCACTAATTGAAGAACAGCT+TGG - chr8.4:80796381-80796400 MS.gene62781:CDS 40.0%
CCCTATATAGCACCAAAGAA+AGG + chr8.4:80795515-80795534 None:intergenic 40.0%
CTAGACATCAGACAAGCAAA+AGG + chr8.4:80798390-80798409 None:intergenic 40.0%
CTGGTTTCCATACAAACATG+GGG - chr8.4:80798003-80798022 MS.gene62781:intron 40.0%
CTTCTCAATGGCATTACCAT+GGG - chr8.4:80794012-80794031 MS.gene62781:intron 40.0%
CTTTCTGCACCATATTTGAG+TGG - chr8.4:80794488-80794507 MS.gene62781:CDS 40.0%
GAAACAGCTATCCCAATTAG+AGG + chr8.4:80797074-80797093 None:intergenic 40.0%
GAATTTCCTTATAGGGAGTG+AGG - chr8.4:80798664-80798683 MS.gene62781:intron 40.0%
GACTTCAATTTGAGAGGATC+GGG - chr8.4:80798094-80798113 MS.gene62781:intron 40.0%
GCAAGAGAAAGAGATGAAAG+AGG + chr8.4:80795839-80795858 None:intergenic 40.0%
GCACATAAATGGTACCTTTG+GGG + chr8.4:80798715-80798734 None:intergenic 40.0%
GCGAGCACAGATGTTAATTA+TGG + chr8.4:80797268-80797287 None:intergenic 40.0%
GCTTCAGATATGTACCAATG+AGG + chr8.4:80793877-80793896 None:intergenic 40.0%
GGAAACTCTTGCCTCTAATT+GGG - chr8.4:80797060-80797079 MS.gene62781:intron 40.0%
GGAATAGTTGTGCAATAACC+GGG - chr8.4:80795784-80795803 MS.gene62781:intron 40.0%
GTAAGTGGGATGATGTGTAT+GGG - chr8.4:80797323-80797342 MS.gene62781:intron 40.0%
GTCGCAAAAACCTGCAAAAA+AGG + chr8.4:80794728-80794747 None:intergenic 40.0%
GTGCTATATAGGGCTAGATA+AGG - chr8.4:80795522-80795541 MS.gene62781:intron 40.0%
TAAAAAGATGCTGCAGCATC+AGG + chr8.4:80794776-80794795 None:intergenic 40.0%
TATACTTCCACTAGGCAATC+AGG + chr8.4:80797421-80797440 None:intergenic 40.0%
TCTTCTCAATGGCATTACCA+TGG - chr8.4:80794011-80794030 MS.gene62781:intron 40.0%
TGAAGAACAGCTTGGGAAAT+TGG - chr8.4:80796389-80796408 MS.gene62781:CDS 40.0%
TGTAAGTGGGATGATGTGTA+TGG - chr8.4:80797322-80797341 MS.gene62781:intron 40.0%
TTAACCCCTCTGTTTGGATT+GGG - chr8.4:80794885-80794904 MS.gene62781:intron 40.0%
TTATCTGGCAATGTGTTCAC+AGG - chr8.4:80795438-80795457 MS.gene62781:intron 40.0%
TTTAACCCCTCTGTTTGGAT+TGG - chr8.4:80794884-80794903 MS.gene62781:intron 40.0%
! AAATGCTTCACGGGATTTTG+TGG + chr8.4:80798974-80798993 None:intergenic 40.0%
! AATGCTTCACGGGATTTTGT+GGG + chr8.4:80798973-80798992 None:intergenic 40.0%
! ATTGGACTCTTAAAGAGTGC+AGG + chr8.4:80797096-80797115 None:intergenic 40.0%
! CAACTTTTAACCCCTCTGTT+TGG - chr8.4:80794879-80794898 MS.gene62781:intron 40.0%
! CATTGGTTGTTGTTGTATGC+AGG - chr8.4:80796166-80796185 MS.gene62781:intron 40.0%
! CTTTGGATATGGCTTTGCTT+TGG + chr8.4:80797807-80797826 None:intergenic 40.0%
! GAAACCTTTTCCAAAGTTGG+AGG + chr8.4:80798889-80798908 None:intergenic 40.0%
! GCTGGTTTCCATACAAACAT+GGG - chr8.4:80798002-80798021 MS.gene62781:intron 40.0%
! GGTTGTGGATGCATTCTTTT+TGG + chr8.4:80797785-80797804 None:intergenic 40.0%
! TTTTACCTTTCACGTCTACC+TGG - chr8.4:80794791-80794810 MS.gene62781:intron 40.0%
!! ATCCCGTGAAGCATTTTTGT+AGG - chr8.4:80798978-80798997 MS.gene62781:CDS 40.0%
!! CAGTTTTGTCAGTTGCAAGT+CGG + chr8.4:80794071-80794090 None:intergenic 40.0%
!! TCCCGTGAAGCATTTTTGTA+GGG - chr8.4:80798979-80798998 MS.gene62781:CDS 40.0%
!!! ATGTGTATGGGTTGGTTTTG+GGG - chr8.4:80797335-80797354 MS.gene62781:intron 40.0%
!!! GATGTGTATGGGTTGGTTTT+GGG - chr8.4:80797334-80797353 MS.gene62781:intron 40.0%
!!! GGGGTTTTAAAATTAGACCC+AGG - chr8.4:80797121-80797140 MS.gene62781:intron 40.0%
!!! TGATGTGTATGGGTTGGTTT+TGG - chr8.4:80797333-80797352 MS.gene62781:intron 40.0%
AAAGCTCAACGGAGTAGAGA+TGG - chr8.4:80796213-80796232 MS.gene62781:intron 45.0%
AACCTCCCAATCCAAACAGA+GGG + chr8.4:80794893-80794912 None:intergenic 45.0%
ACGAAAAGCTACGAGAGAGA+AGG - chr8.4:80796546-80796565 MS.gene62781:intron 45.0%
AGAAATGCACCATGCATCCT+TGG + chr8.4:80798303-80798322 None:intergenic 45.0%
AGCTTCTCCATTGAGCTTGA+AGG - chr8.4:80798343-80798362 MS.gene62781:intron 45.0%
CAAGAGAAAGACGGTAACTG+AGG + chr8.4:80797625-80797644 None:intergenic 45.0%
CAAGAGTTTCCCACATCACT+TGG + chr8.4:80797051-80797070 None:intergenic 45.0%
CAGAGAAGGAATCACCATAG+AGG + chr8.4:80795370-80795389 None:intergenic 45.0%
CAGTCATCTCCGATATGCAA+AGG - chr8.4:80795552-80795571 MS.gene62781:intron 45.0%
CATTTCACGCCACAATGCAA+GGG + chr8.4:80794202-80794221 None:intergenic 45.0%
CGAAAAGCTACGAGAGAGAA+GGG - chr8.4:80796547-80796566 MS.gene62781:intron 45.0%
CTAACGCCACCACTCAAATA+TGG + chr8.4:80794500-80794519 None:intergenic 45.0%
CTATAATCAGGGGTGGCTTA+AGG - chr8.4:80795715-80795734 MS.gene62781:intron 45.0%
CTCTATGCACTTAAAGAGGG+AGG - chr8.4:80794968-80794987 MS.gene62781:intron 45.0%
GAGGTGCAACAAGAGAAAGA+CGG + chr8.4:80797634-80797653 None:intergenic 45.0%
GAGTAGAGATGGTTGCATGT+GGG - chr8.4:80796224-80796243 MS.gene62781:intron 45.0%
GCGACCCCTGAAATTCTTAT+TGG - chr8.4:80794743-80794762 MS.gene62781:intron 45.0%
GGGAAACTCTTGCCTCTAAT+TGG - chr8.4:80797059-80797078 MS.gene62781:intron 45.0%
TATGCACTTAAAGAGGGAGG+AGG - chr8.4:80794971-80794990 MS.gene62781:intron 45.0%
TATGGTGATCTTGTACACCC+AGG - chr8.4:80796453-80796472 MS.gene62781:intron 45.0%
TCAATTTGAGAGGATCGGGA+TGG - chr8.4:80798098-80798117 MS.gene62781:intron 45.0%
TCTGCACCATATTTGAGTGG+TGG - chr8.4:80794491-80794510 MS.gene62781:CDS 45.0%
TGGCATTGTTAGGCTATCGA+TGG - chr8.4:80795202-80795221 MS.gene62781:intron 45.0%
TTCTATGACAGATGGGTCGT+CGG + chr8.4:80796418-80796437 None:intergenic 45.0%
TTTAGGCAGGCACCTTTCTT+TGG - chr8.4:80795500-80795519 MS.gene62781:intron 45.0%
! GGATCCTCCAACTTTGGAAA+AGG - chr8.4:80798882-80798901 MS.gene62781:intron 45.0%
! TTCTGGTTGCTCTTCAGAGA+TGG - chr8.4:80797755-80797774 MS.gene62781:intron 45.0%
!! CCCGTGAAGCATTTTTGTAG+GGG - chr8.4:80798980-80798999 MS.gene62781:CDS 45.0%
!! GAAGAGGGGTAGCTATTTTG+AGG + chr8.4:80797532-80797551 None:intergenic 45.0%
!! GGCTGGTTTCCATACAAACA+TGG - chr8.4:80798001-80798020 MS.gene62781:intron 45.0%
!! GTTGTATGCAGGAGAGTACT+TGG - chr8.4:80796177-80796196 MS.gene62781:intron 45.0%
!! TATGGCTTTGCTTTGGGTTG+TGG + chr8.4:80797800-80797819 None:intergenic 45.0%
AATGGCATTACCATGGGTGG+TGG - chr8.4:80794018-80794037 MS.gene62781:intron 50.0%
ACCTCCCAATCCAAACAGAG+GGG + chr8.4:80794892-80794911 None:intergenic 50.0%
AGAAAGACGGTAACTGAGGG+TGG + chr8.4:80797621-80797640 None:intergenic 50.0%
ATGGCATTACCATGGGTGGT+GGG - chr8.4:80794019-80794038 MS.gene62781:intron 50.0%
CAGGTGAAACCAAGGATGCA+TGG - chr8.4:80798291-80798310 MS.gene62781:intron 50.0%
CAGTTTCCCTGATTGCCTAG+TGG - chr8.4:80797411-80797430 MS.gene62781:intron 50.0%
CTCAATGGCATTACCATGGG+TGG - chr8.4:80794015-80794034 MS.gene62781:intron 50.0%
CTCCAGGTAGCTCTTCTCAA+TGG - chr8.4:80794000-80794019 MS.gene62781:intron 50.0%
CTGACTGGGGAAAAGCTCAA+CGG - chr8.4:80796202-80796221 MS.gene62781:intron 50.0%
GAACCTCCCAATCCAAACAG+AGG + chr8.4:80794894-80794913 None:intergenic 50.0%
GATATCTGGGGACTTCTGTG+AGG - chr8.4:80798574-80798593 MS.gene62781:intron 50.0%
GCATGCTCTCCAAGTGATGT+GGG - chr8.4:80797039-80797058 MS.gene62781:intron 50.0%
GCATTTCACGCCACAATGCA+AGG + chr8.4:80794203-80794222 None:intergenic 50.0%
GCCGCAGTAGTGTACTACAA+AGG - chr8.4:80796475-80796494 MS.gene62781:intron 50.0%
GGAGAATCGTGCACTTGTAG+AGG + chr8.4:80797653-80797672 None:intergenic 50.0%
GGAGTAGAGATGGTTGCATG+TGG - chr8.4:80796223-80796242 MS.gene62781:intron 50.0%
GGGCAGGAATTTCAATCCCT+GGG - chr8.4:80794040-80794059 MS.gene62781:intron 50.0%
GTGGGATGATGTGTATGGGT+TGG - chr8.4:80797327-80797346 MS.gene62781:intron 50.0%
TCACGTCTACCTGGTCACAT+AGG - chr8.4:80794800-80794819 MS.gene62781:intron 50.0%
TGCATCCTTGGTTTCACCTG+CGG + chr8.4:80798291-80798310 None:intergenic 50.0%
TGCATGCTCTCCAAGTGATG+TGG - chr8.4:80797038-80797057 MS.gene62781:intron 50.0%
TGCCATTGAGAAGAGCTACC+TGG + chr8.4:80794005-80794024 None:intergenic 50.0%
TGTGACCAGGTAGACGTGAA+AGG + chr8.4:80794799-80794818 None:intergenic 50.0%
TGTTAGTGGCCCTTGCATTG+TGG - chr8.4:80794190-80794209 MS.gene62781:intron 50.0%
TTCCAATAGGAAGTTGCCGC+AGG - chr8.4:80798272-80798291 MS.gene62781:intron 50.0%
TTGCAAGTCGGAATGTCCCA+GGG + chr8.4:80794059-80794078 None:intergenic 50.0%
! GGGGCACTTATACTTCCACT+AGG + chr8.4:80797429-80797448 None:intergenic 50.0%
!! ACGTGTAGTGGACAAGGACA+TGG - chr8.4:80798689-80798708 MS.gene62781:intron 50.0%
!! AGAGTACTTGGCTCTGACTG+GGG - chr8.4:80796189-80796208 MS.gene62781:intron 50.0%
!! GAGAGTACTTGGCTCTGACT+GGG - chr8.4:80796188-80796207 MS.gene62781:intron 50.0%
!! GAGGGGTAGCTATTTTGAGG+AGG + chr8.4:80797529-80797548 None:intergenic 50.0%
!! GCGCAACAAGCACTGATCAA+GGG + chr8.4:80798519-80798538 None:intergenic 50.0%
ACGTGCCCTCACTCCCTATA+AGG + chr8.4:80798673-80798692 None:intergenic 55.0%
AGGCTATCGATGGCGATCAG+CGG - chr8.4:80795212-80795231 MS.gene62781:intron 55.0%
AGTTGCCGCAGGTGAAACCA+AGG - chr8.4:80798283-80798302 MS.gene62781:intron 55.0%
CACCTGCGGCAACTTCCTAT+TGG + chr8.4:80798277-80798296 None:intergenic 55.0%
GCAGTGGGATCCTCCAACTT+TGG - chr8.4:80798876-80798895 MS.gene62781:intron 55.0%
GGGGCAGGAATTTCAATCCC+TGG - chr8.4:80794039-80794058 MS.gene62781:intron 55.0%
GTAGTACACTACTGCGGCCT+GGG + chr8.4:80796473-80796492 None:intergenic 55.0%
GTTGCAAGTCGGAATGTCCC+AGG + chr8.4:80794060-80794079 None:intergenic 55.0%
TGGCATTACCATGGGTGGTG+GGG - chr8.4:80794020-80794039 MS.gene62781:intron 55.0%
TGTAGTACACTACTGCGGCC+TGG + chr8.4:80796474-80796493 None:intergenic 55.0%
TTGAGAGGATCGGGATGGTG+TGG - chr8.4:80798103-80798122 MS.gene62781:intron 55.0%
! ACCCCTCTGTTTGGATTGGG+AGG - chr8.4:80794888-80794907 MS.gene62781:intron 55.0%
! AGTGCTTGTTGCGCGAGTAC+CGG - chr8.4:80798525-80798544 MS.gene62781:intron 55.0%
! TAAACGGAAGCACGCCCTTC+AGG + chr8.4:80797155-80797174 None:intergenic 55.0%
!! CGCGCAACAAGCACTGATCA+AGG + chr8.4:80798520-80798539 None:intergenic 55.0%
!! GGAGAGTACTTGGCTCTGAC+TGG - chr8.4:80796187-80796206 MS.gene62781:intron 55.0%
AATTCCTGCCCCACCACCCA+TGG + chr8.4:80794031-80794050 None:intergenic 60.0%
ACCCAGGTAGAAGGGCCTGA+AGG - chr8.4:80797137-80797156 MS.gene62781:intron 60.0%
CCCAGGTAGAAGGGCCTGAA+GGG - chr8.4:80797138-80797157 MS.gene62781:intron 60.0%
CCCTTCAGGCCCTTCTACCT+GGG + chr8.4:80797141-80797160 None:intergenic 60.0%
GGACAAGGACATGGCCCCAA+AGG - chr8.4:80798698-80798717 MS.gene62781:intron 60.0%
!! ATTACCATGGGTGGTGGGGC+AGG - chr8.4:80794024-80794043 MS.gene62781:intron 60.0%
!! GAGGGCACGTGTAGTGGACA+AGG - chr8.4:80798683-80798702 MS.gene62781:intron 60.0%
GCCCTTCAGGCCCTTCTACC+TGG + chr8.4:80797142-80797161 None:intergenic 65.0%
! GGGAGTGAGGGCACGTGTAG+TGG - chr8.4:80798677-80798696 MS.gene62781:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 80793827 80798999 80793827 ID=MS.gene62781
chr8.4 mRNA 80793827 80798999 80793827 ID=MS.gene62781.t1;Parent=MS.gene62781
chr8.4 exon 80798925 80798999 80798925 ID=MS.gene62781.t1.exon1;Parent=MS.gene62781.t1
chr8.4 CDS 80798925 80798999 80798925 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80798737 80798820 80798737 ID=MS.gene62781.t1.exon2;Parent=MS.gene62781.t1
chr8.4 CDS 80798737 80798820 80798737 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80798005 80798089 80798005 ID=MS.gene62781.t1.exon3;Parent=MS.gene62781.t1
chr8.4 CDS 80798005 80798089 80798005 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80796553 80796638 80796553 ID=MS.gene62781.t1.exon4;Parent=MS.gene62781.t1
chr8.4 CDS 80796553 80796638 80796553 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80796330 80796451 80796330 ID=MS.gene62781.t1.exon5;Parent=MS.gene62781.t1
chr8.4 CDS 80796330 80796451 80796330 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80795982 80796042 80795982 ID=MS.gene62781.t1.exon6;Parent=MS.gene62781.t1
chr8.4 CDS 80795982 80796042 80795982 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80794447 80794545 80794447 ID=MS.gene62781.t1.exon7;Parent=MS.gene62781.t1
chr8.4 CDS 80794447 80794545 80794447 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80794231 80794332 80794231 ID=MS.gene62781.t1.exon8;Parent=MS.gene62781.t1
chr8.4 CDS 80794231 80794332 80794231 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80794107 80794148 80794107 ID=MS.gene62781.t1.exon9;Parent=MS.gene62781.t1
chr8.4 CDS 80794107 80794148 80794107 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
chr8.4 exon 80793827 80793946 80793827 ID=MS.gene62781.t1.exon10;Parent=MS.gene62781.t1
chr8.4 CDS 80793827 80793946 80793827 ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1
Gene Sequence

>MS.gene62781

ATGGATGCCTGCAAACAATTTTTTACAACAATCTATACTTTTATATACCTCATTGGTACATATCTGAAGCCGCATGTGAGTATACTAACTATTTCCATCATTCTCAATTATTTCATAGACTCCTCGTATCGAATCTCCTGTTTTTTTATGCTAAATTATTTATTTATACTTTTCTCCAGGTAGCTCTTCTCAATGGCATTACCATGGGTGGTGGGGCAGGAATTTCAATCCCTGGGACATTCCGACTTGCAACTGACAAAACTGTATCTAATATAGAAACCTCTTGCTCATTATTTATGTATTTTCCTTTCGTGGATTGTTGTTATCTGTAAGTTAGGACTTAGGTTTTGTGATTTCAGAATATGTTAGTGGCCCTTGCATTGTGGCGTGAAATGCTTAAATACCGCATTACCTTTAGTAATATAGAAGCTTATACACTAACACTCACTTTATCTTTCCGATGTAGGACTTTGGATTATATAGGTTATTACCAAGCAAATGTTGATAGTGGTAGCTTATCCAATGACAATTGTACAGCACATGTCAAAATATTTGTTTGCTTAATTGTATTATTGGGAAAAGCATTATGTGTTTGGTCTTACAAGTTTAGCGTCTATTTCGATATGGAGAACTGCACATGCCTTTACATAGATGACTTCTCCTTTCTGCACCATATTTGAGTGGTGGCGTTAGTTCTAGTGTTAATATCAAATCATAAATGGAAAGCGGTGGAACAAAAAATTTGTAAATTGGAATTTGGAGTGGCAAATAAGTAACAAGTTGTATGTCTAAGTTAGAATTCTATCCTCTCCTAGTTTAACTAGTTTGTCTTCATTTTGGAAGAGATATGCATTGTATAAATCTTGGTTGCATATGCCGACTTAGCTATAACTTATCACCTTTTTTGCAGGTTTTTGCGACCCCTGAAATTCTTATTGGATTTCATCCTGATGCTGCAGCATCTTTTTACCTTTCACGTCTACCTGGTCACATAGGTAATATTATGTGTGTACAATATGCATGCCTCCATCTTCTGCTTTAAGTTAAAGTTTCAACTTTTAACCCCTCTGTTTGGATTGGGAGGTTCTGTATAACTCATTTTAACAGTTATAGTCTTGAAGATATTTAACATTGTACTGATCTCTATGCACTTAAAGAGGGAGGAGGTTGCAAGTTTTGACAATTTTATATGGTCAAGTTATTAGAAATTAGAATGCGTTATTGTAAAACAAATTGCAATTCTCTTGTCAAAGAGAAGCTCCACTTTGATTGATTTTGTTCATGGAAGAGTCTTATTGGTACAATCGGGATCGACTAAAAGATATAATTCCATATTTACGTTTTATACCTGTTCTTCATCATAGAATGATAGTTTTGGCATTGTTAGGCTATCGATGGCGATCAGCGGTAGTGATCAGTTCATTTAAACTGGGATTGTTACTTAATAGAAATTTCATTGATATTGAGCTGAGTTACAATTCCTTTTTACAAGACTATGACTTGTCTGAAAAAGAGTTTGGAATCTGAATTCTTCTGGATTCCTCTATGGTGATTCCTTCTCTGAGCATTTTATTCAATCCCTTAACTTTCAAAGATTTTTTAGGAAAAATCTTATCTGGCAATGTGTTCACAGGCAATTCAAGTTCAGAAATGGTGCAACACATTTCTGCATTTTTAGGCAGGCACCTTTCTTTGGTGCTATATAGGGCTAGATAAGGTTGTTTACAGTCATCTCCGATATGCAAAGGGATTGAACAGTCTTGCTACATTCCTAGTTCCTTTTATTGCTTTGTTCTTTTTGTTTTCTGTTCACGGGGATACCTTATCCTTTCCCTTCTTCTAATTTTCATCTCTCTTATTATACTTATTTTTTCTATACAATATTTTGCTATAATCAGGGGTGGCTTAAGGTTAGTGTTAGTTATGGTGGAATCTAGTTTTCTACTTAACATAGGTTGGAATAGTTGTGCAATAACCGGGTCAATCTTCAAAATTTAGTTTATGTTTTCCCTCTTTCATCTCTTTCTCTTGCACACATCTTACAAGTTCATAGAATTATTGGAATCCTAAACAGCAATGATATAAATTTCATTTTCTTAACTGATATTATTACTTCCATCGATATCACATGTTATGCACCAATGCTATTATCCAGCCTTATTTATCACATCAAGTATTGACAATATTGACAATATATAATTAAATGATGAAAGAATTGCTTAATAGGTAATCCTCTTATTTTTAACATAATTGATTGATGAGAAATTTTCATGGTGTTAAGAACTAGTTACCAATTGAAGATGTAATTGATGAATTCCTCTGTTAGTCTTTCTTTGTTTCATTGGTTGTTGTTGTATGCAGGAGAGTACTTGGCTCTGACTGGGGAAAAGCTCAACGGAGTAGAGATGGTTGCATGTGGGCTTGCTACACACTATTCACTACTTGCAGTTTAGTTTTGCTAGACCCTATTTCTTTTTTCATTAATTCAATTGAAATAGACTCTTCTTGCTATATGACATTCAAAACCTTCTTTTATTTTGTCCTATAGAGGCTTCCACTAATTGAAGAACAGCTTGGGAAATTGGTTACCGACGACCCATCTGTCATAGAAACCACTTTAGAACAGTATGGTGATCTTGTACACCCAGGCCGCAGTAGTGTACTACAAAGGTTTGATCGTCTTGTCTCTCATTCTCTATTAGAAAAAACAATACAAAAAACGAAAAGCTACGAGAGAGAAGGGCAAGAGATAAAAAGTTCAGTATTTCAAACAGCCTTTCTTTCCATCTTCAAATCAAAACAAAGAAGCCTCTTTAAAAATGATCATTATTAGAAATCCTGAAAGAAGATAAGAAAATAGTATGATGAACAATAAGTCGACAGAATGTTCTCTTTGGTTACTTTTTGTATATTTTGATTCACAGTATAAGATAGTGCTTCTACTTTTTTCTTTTCAGGCTTGAAATTCTAGATAAATGCTTTGGCCATGACACAGTTGAAGAGATTGTTGATGCATTGGTAAGATTTGCATTATTTCTTTAAACAACAATAACAATTAACAAATACCCTTAGGCACTGATTAGCTTTTGCCAAATGAAAAATAGGAAAATATTTTCCCTAAATTAACAAAAGAGGAAAGTATTCAAGTCTAACCACGTTAGGTTAAACTGTAATTTACCCTAAATTTTGCTAAAGAGGGAAAGCATTTATCTGCATGCTCTCCAAGTGATGTGGGAAACTCTTGCCTCTAATTGGGATAGCTGTTTCCTGCACTCTTTAAGAGTCCAATAATTAGGGGTTTTAAAATTAGACCCAGGTAGAAGGGCCTGAAGGGCGTGCTTCCGTTTAGAAGCAGATATGCTATGGCTTACTAGCTGGTGTCTCCACTAAAGCTCTTAGTTGTAATCTTGATCAGATTAACATATATGTGCCAGCTGGCCATAATTAACATCTGTGCTCGCAGTTGAGAAATGTTAAAAGCTCAGCTTGAATATGTGTAAGTGGGATGATGTGTATGGGTTGGTTTTGGGGTACTTGTGTGATTTGTAATTTCAGTTGACAATCAGGGGATTATAAAATATAAACAGTTTCCCTGATTGCCTAGTGGAAGTATAAGTGCCCCAAAAAAGCCAAATAGAGAATTTTTTGGGCATTACTATTCACATCCCTTTTTTACTAACACATCACCTCGTTTTTTTTCCTCCTCAAAATAGCTACCCCTCTTCGTTTTCTATATTTGTCAATACCTACCACAAACTCTTCTTTACAAAATCAAAGACTGTGTTCTGATTCCACCCTCAGTTACCGTCTTTCTCTTGTTGCACCTCTACAAGTGCACGATTCTCCTAAATTATGATGTTGTTGAACATTACAGGGGTCAAATCAGATTGTTGAGATCTGGGAGCAACATATGCATAATGCATGCTTTTTCTGGTTGCTCTTCAGAGATGGAAAACCAAAAAGAATGCATCCACAACCCAAAGCAAAGCCATATCCAAAGTTAGCTTTAACATGTTTGGTTTATGTATAGAAATATCAAGTTGCAACAGTTAAGCCAATTCTACTGTTGTTGAAACTACACAAGTATGAGTGTGGAATGCCTAAACTCTAAAAGCATAGTAATATTTACGAAAAACACATGTACTACTTTCGATAGGTAAGTATATATATTTGTGGCTGGTTTCCATACAAACATGGGGTTTGTCTTTTATTCAAAGTGTTTGTCATATGTGATAATTTTTGGTGCACGCATACAAGTAAAAATAGAGACTTCAATTTGAGAGGATCGGGATGGTGTGGTGGGGCTTTTGTAACATTAAGGGTATTTTTAGAACAAAAAGATATGTTTTGGCTTCTCTTGGATGTGTTCCTTTCTTTTGTATGTGTTGTGACTTACATTTGGATGAACACGTTATCTTTTCTTTTTATTCTTATCATTTTTAAATTTCCAATAGGAAGTTGCCGCAGGTGAAACCAAGGATGCATGGTGCATTTCTACCCTAAATAGACTTAAAGAAGCTTCTCCATTGAGCTTGAAGGTTTCCTTGAGATCTGTGAGTTCCTTTTGCTTGTCTGATGTCTAGATATTTTGAATTCCTGTTTTCTTTCTCTTCTTTTCTCATAACCAGCCAACTGCTTCTATAATGTAATCAATCTATTTGGGATAGATACGAGAAGGTAGATTTCAGACCCTTGATCAGTGCTTGTTGCGCGAGTACCGGATGACTTTACAAGCAATTTCTAAACAGATATCTGGGGACTTCTGTGAGGTATAAACATTGTGAATTTCTGGAAACTGAAACAAACTTCTTATGTCTTTTTCAACATATGTTAATTTGAATTTCCTTATAGGGAGTGAGGGCACGTGTAGTGGACAAGGACATGGCCCCAAAGGTACCATTTATGTGCATTATTTTTTTAATTTTTTTTCAGATTTAAAATTCATTGGCCTAATACAATTTCTTCTTTGCAGACTGATTTTCTCCCTGTTTATATATAAAAATTCAATTGAAAATTGATATTCATACTCTGATTGTGAATTAAATATATGCAGTGGGATCCTCCAACTTTGGAAAAGGTTTCTCAAGATATGGTGGATCAGTACTTCATACCTCTAACTGAATTTGAACCTGATTTAGAGTTACCCACAAAATCCCGTGAAGCATTTTTGTAG

Protein sequence

>MS.gene62781.t1

MDACKQFFTTIYTFIYLIGTYLKPHVALLNGITMGGGAGISIPGTFRLATDKTVFATPEILIGFHPDAAASFYLSRLPGHIGEYLALTGEKLNGVEMVACGLATHYSLLARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVHPGRSSVLQRLEILDKCFGHDTVEEIVDALEVAAGETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLLREYRMTLQAISKQISGDFCEGVRARVVDKDMAPKWDPPTLEKVSQDMVDQYFIPLTEFEPDLELPTKSREAFL