Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62781.t1 | XP_003626696.1 | 96.9 | 291 | 9 | 0 | 1 | 291 | 111 | 401 | 2.70E-159 | 571.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62781.t1 | Q5XF59 | 67.7 | 288 | 93 | 0 | 2 | 289 | 113 | 400 | 2.0e-118 | 426.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62781.t1 | G7LBK0 | 96.9 | 291 | 9 | 0 | 1 | 291 | 111 | 401 | 1.9e-159 | 571.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene020199 | MS.gene62781 | PPI |
MS.gene33113 | MS.gene62781 | PPI |
MS.gene015737 | MS.gene62781 | PPI |
MS.gene019194 | MS.gene62781 | PPI |
MS.gene04775 | MS.gene62781 | PPI |
MS.gene058482 | MS.gene62781 | PPI |
MS.gene035327 | MS.gene62781 | PPI |
MS.gene002583 | MS.gene62781 | PPI |
MS.gene01565 | MS.gene62781 | PPI |
MS.gene05932 | MS.gene62781 | PPI |
MS.gene049135 | MS.gene62781 | PPI |
MS.gene041553 | MS.gene62781 | PPI |
MS.gene051489 | MS.gene62781 | PPI |
MS.gene036493 | MS.gene62781 | PPI |
MS.gene022768 | MS.gene62781 | PPI |
MS.gene39279 | MS.gene62781 | PPI |
MS.gene004252 | MS.gene62781 | PPI |
MS.gene69510 | MS.gene62781 | PPI |
MS.gene54295 | MS.gene62781 | PPI |
MS.gene62781 | MS.gene049135 | PPI |
MS.gene016092 | MS.gene62781 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62781.t1 | MTR_8g005990 | 96.907 | 291 | 9 | 0 | 1 | 291 | 88 | 378 | 0.0 | 588 |
MS.gene62781.t1 | MTR_8g005990 | 96.907 | 291 | 9 | 0 | 1 | 291 | 111 | 401 | 0.0 | 587 |
MS.gene62781.t1 | MTR_1g014040 | 68.729 | 291 | 90 | 1 | 2 | 291 | 119 | 409 | 1.03e-152 | 433 |
MS.gene62781.t1 | MTR_3g046330 | 45.745 | 282 | 152 | 1 | 2 | 283 | 85 | 365 | 1.59e-87 | 266 |
MS.gene62781.t1 | MTR_8g010580 | 48.571 | 280 | 143 | 1 | 7 | 285 | 91 | 370 | 1.65e-85 | 261 |
MS.gene62781.t1 | MTR_8g010580 | 49.187 | 246 | 125 | 0 | 7 | 252 | 91 | 336 | 2.04e-76 | 236 |
MS.gene62781.t1 | MTR_8g010580 | 48.707 | 232 | 119 | 0 | 7 | 238 | 91 | 322 | 2.83e-70 | 220 |
MS.gene62781.t1 | MTR_8g103840 | 33.101 | 287 | 168 | 9 | 6 | 273 | 10 | 291 | 1.94e-37 | 134 |
MS.gene62781.t1 | MTR_8g103840 | 32.872 | 289 | 170 | 9 | 4 | 273 | 24 | 307 | 1.98e-37 | 135 |
MS.gene62781.t1 | MTR_8g103840 | 32.872 | 289 | 170 | 9 | 4 | 273 | 85 | 368 | 6.35e-37 | 135 |
MS.gene62781.t1 | MTR_8g103840 | 33.101 | 287 | 168 | 9 | 6 | 273 | 124 | 405 | 1.55e-36 | 135 |
MS.gene62781.t1 | MTR_8g103840 | 32.576 | 264 | 154 | 9 | 29 | 273 | 1 | 259 | 2.24e-30 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62781.t1 | AT4G31810 | 65.862 | 290 | 96 | 1 | 5 | 291 | 120 | 409 | 7.07e-146 | 416 |
MS.gene62781.t1 | AT3G60510 | 67.474 | 289 | 94 | 0 | 2 | 290 | 113 | 401 | 5.97e-144 | 410 |
MS.gene62781.t1 | AT3G60510 | 62.102 | 314 | 94 | 1 | 2 | 290 | 113 | 426 | 2.23e-138 | 397 |
MS.gene62781.t1 | AT5G65940 | 49.110 | 281 | 142 | 1 | 6 | 286 | 89 | 368 | 6.90e-97 | 290 |
MS.gene62781.t1 | AT5G65940 | 49.110 | 281 | 142 | 1 | 6 | 286 | 89 | 368 | 6.90e-97 | 290 |
MS.gene62781.t1 | AT3G60510 | 65.686 | 204 | 70 | 0 | 2 | 205 | 113 | 316 | 2.86e-93 | 279 |
MS.gene62781.t1 | AT2G30650 | 48.057 | 283 | 145 | 1 | 6 | 286 | 85 | 367 | 4.99e-93 | 280 |
MS.gene62781.t1 | AT2G30660 | 49.621 | 264 | 133 | 0 | 7 | 270 | 86 | 349 | 2.84e-92 | 278 |
MS.gene62781.t1 | AT2G30660 | 49.621 | 264 | 133 | 0 | 7 | 270 | 54 | 317 | 3.02e-92 | 277 |
MS.gene62781.t1 | AT5G65940 | 49.798 | 247 | 124 | 0 | 6 | 252 | 89 | 335 | 3.80e-86 | 261 |
MS.gene62781.t1 | AT1G06550 | 42.199 | 282 | 163 | 0 | 2 | 283 | 85 | 366 | 6.37e-83 | 254 |
MS.gene62781.t1 | AT5G65940 | 48.523 | 237 | 122 | 0 | 6 | 242 | 89 | 325 | 5.47e-80 | 245 |
MS.gene62781.t1 | AT2G30650 | 48.101 | 237 | 123 | 0 | 6 | 242 | 85 | 321 | 4.91e-77 | 238 |
MS.gene62781.t1 | AT4G13360 | 32.660 | 297 | 173 | 10 | 4 | 281 | 129 | 417 | 2.53e-42 | 150 |
MS.gene62781.t1 | AT3G24360 | 32.082 | 293 | 172 | 10 | 6 | 277 | 24 | 310 | 1.15e-38 | 138 |
MS.gene62781.t1 | AT3G24360 | 31.525 | 295 | 175 | 10 | 4 | 277 | 24 | 312 | 3.08e-38 | 137 |
MS.gene62781.t1 | AT3G24360 | 31.741 | 293 | 173 | 10 | 6 | 277 | 3 | 289 | 3.54e-38 | 136 |
MS.gene62781.t1 | AT3G24360 | 31.525 | 295 | 175 | 10 | 4 | 277 | 126 | 414 | 2.39e-37 | 137 |
MS.gene62781.t1 | AT3G24360 | 31.741 | 293 | 173 | 10 | 6 | 277 | 124 | 410 | 2.83e-37 | 137 |
MS.gene62781.t1 | AT3G24360 | 33.333 | 192 | 117 | 6 | 5 | 187 | 127 | 316 | 9.89e-20 | 88.2 |
Find 78 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCTTCTTTAAGTCTATTT+AGG | 0.111977 | 8.4:+80794479 | None:intergenic |
GCGACCCCTGAAATTCTTAT+TGG | 0.185040 | 8.4:-80798061 | MS.gene62781:CDS |
TGAAGAACAGCTTGGGAAAT+TGG | 0.217628 | 8.4:-80796415 | MS.gene62781:CDS |
GCAATTTCTAAACAGATATC+TGG | 0.230533 | 8.4:-80794244 | MS.gene62781:CDS |
TGAAATCCAATAAGAATTTC+AGG | 0.232091 | 8.4:+80798055 | None:intergenic |
AGCTTCTTTAAGTCTATTTA+GGG | 0.315411 | 8.4:+80794480 | None:intergenic |
CCAAGCTGTTCTTCAATTAG+TGG | 0.321509 | 8.4:+80796423 | None:intergenic |
GGAAAAGGTTTCTCAAGATA+TGG | 0.340105 | 8.4:-80793907 | MS.gene62781:CDS |
TCAGGTTCAAATTCAGTTAG+AGG | 0.341063 | 8.4:+80793867 | None:intergenic |
GCAGTGGGATCCTCCAACTT+TGG | 0.373532 | 8.4:-80793928 | MS.gene62781:intron |
TTTGTGGGTAACTCTAAATC+AGG | 0.392416 | 8.4:+80793849 | None:intergenic |
GAAATTCTAGATAAATGCTT+TGG | 0.392714 | 8.4:-80796016 | MS.gene62781:CDS |
ATTACCATGGGTGGTGGGGC+AGG | 0.398663 | 8.4:-80798780 | MS.gene62781:CDS |
GGAGAGTACTTGGCTCTGAC+TGG | 0.403299 | 8.4:-80796617 | MS.gene62781:CDS |
AGCTTCTCCATTGAGCTTGA+AGG | 0.426243 | 8.4:-80794461 | MS.gene62781:CDS |
TGTAGTACACTACTGCGGCC+TGG | 0.431132 | 8.4:+80796333 | None:intergenic |
CACTAATTGAAGAACAGCTT+GGG | 0.439000 | 8.4:-80796422 | MS.gene62781:CDS |
CTCCAGGTAGCTCTTCTCAA+TGG | 0.450877 | 8.4:-80798804 | MS.gene62781:intron |
AATGGCATTACCATGGGTGG+TGG | 0.452416 | 8.4:-80798786 | MS.gene62781:CDS |
AGAAATGCACCATGCATCCT+TGG | 0.460714 | 8.4:+80794504 | None:intergenic |
GAAACCACTTTAGAACAGTA+TGG | 0.461406 | 8.4:-80796369 | MS.gene62781:CDS |
AAGGAAACCTTCAAGCTCAA+TGG | 0.465743 | 8.4:+80794454 | None:intergenic |
CGCGCAACAAGCACTGATCA+AGG | 0.466530 | 8.4:+80794287 | None:intergenic |
GGATCCTCCAACTTTGGAAA+AGG | 0.471727 | 8.4:-80793922 | MS.gene62781:CDS |
GTAGTACACTACTGCGGCCT+GGG | 0.475897 | 8.4:+80796334 | None:intergenic |
GTTGTATGCAGGAGAGTACT+TGG | 0.476068 | 8.4:-80796627 | MS.gene62781:intron |
GGGGCAGGAATTTCAATCCC+TGG | 0.494304 | 8.4:-80798765 | MS.gene62781:CDS |
CAATTTCTAAACAGATATCT+GGG | 0.502985 | 8.4:-80794243 | MS.gene62781:CDS |
AGTGCTTGTTGCGCGAGTAC+CGG | 0.503659 | 8.4:-80794279 | MS.gene62781:CDS |
AAATTGCTTGTAAAGTCATC+CGG | 0.507974 | 8.4:+80794260 | None:intergenic |
GTTGCAAGTCGGAATGTCCC+AGG | 0.508371 | 8.4:+80798747 | None:intergenic |
AAAGTGGTTTCTATGACAGA+TGG | 0.510254 | 8.4:+80796381 | None:intergenic |
GAGAGTACTTGGCTCTGACT+GGG | 0.511332 | 8.4:-80796616 | MS.gene62781:CDS |
CCACTAATTGAAGAACAGCT+TGG | 0.512272 | 8.4:-80796423 | MS.gene62781:CDS |
ATGGCATTACCATGGGTGGT+GGG | 0.515533 | 8.4:-80798785 | MS.gene62781:CDS |
ATCACCATACTGTTCTAAAG+TGG | 0.531202 | 8.4:+80796365 | None:intergenic |
TGAAGAGATTGTTGATGCAT+TGG | 0.532230 | 8.4:-80795981 | MS.gene62781:intron |
GAAATCCAATAAGAATTTCA+GGG | 0.534007 | 8.4:+80798056 | None:intergenic |
CTCAATGGCATTACCATGGG+TGG | 0.535280 | 8.4:-80798789 | MS.gene62781:CDS |
TTCCAATAGGAAGTTGCCGC+AGG | 0.536254 | 8.4:-80794532 | MS.gene62781:intron |
GGGAGTGAGGGCACGTGTAG+TGG | 0.536535 | 8.4:-80794127 | MS.gene62781:CDS |
AATTTCCTTATAGGGAGTGA+GGG | 0.555093 | 8.4:-80794139 | MS.gene62781:intron |
AATTCCTGCCCCACCACCCA+TGG | 0.559916 | 8.4:+80798776 | None:intergenic |
TGCATCCTTGGTTTCACCTG+CGG | 0.562087 | 8.4:+80794516 | None:intergenic |
CAGGTGAAACCAAGGATGCA+TGG | 0.564859 | 8.4:-80794513 | MS.gene62781:CDS |
GAATTTCCTTATAGGGAGTG+AGG | 0.566187 | 8.4:-80794140 | MS.gene62781:intron |
CTTCTCAATGGCATTACCAT+GGG | 0.568968 | 8.4:-80798792 | MS.gene62781:CDS |
GGGCAGGAATTTCAATCCCT+GGG | 0.570054 | 8.4:-80798764 | MS.gene62781:CDS |
TGGCATTACCATGGGTGGTG+GGG | 0.573172 | 8.4:-80798784 | MS.gene62781:CDS |
ACGTGTAGTGGACAAGGACA+TGG | 0.574921 | 8.4:-80794115 | MS.gene62781:CDS |
AAAGGAACTCACAGATCTCA+AGG | 0.582810 | 8.4:+80794435 | None:intergenic |
AAAGCTCAACGGAGTAGAGA+TGG | 0.584222 | 8.4:-80796591 | MS.gene62781:CDS |
TTCTATGACAGATGGGTCGT+CGG | 0.588045 | 8.4:+80796389 | None:intergenic |
CAATCTCTTCAACTGTGTCA+TGG | 0.589006 | 8.4:+80795993 | None:intergenic |
TCTTCTCAATGGCATTACCA+TGG | 0.598018 | 8.4:-80798793 | MS.gene62781:CDS |
AAGTGGTTTCTATGACAGAT+GGG | 0.600276 | 8.4:+80796382 | None:intergenic |
AAAGGTTTCTCAAGATATGG+TGG | 0.602459 | 8.4:-80793904 | MS.gene62781:CDS |
GGACAAGGACATGGCCCCAA+AGG | 0.605853 | 8.4:-80794106 | MS.gene62781:intron |
TGTGACCAGGTAGACGTGAA+AGG | 0.610304 | 8.4:+80798008 | None:intergenic |
GCGCAACAAGCACTGATCAA+GGG | 0.615691 | 8.4:+80794288 | None:intergenic |
TCACGTCTACCTGGTCACAT+AGG | 0.617502 | 8.4:-80798004 | MS.gene62781:intron |
GGAGTAGAGATGGTTGCATG+TGG | 0.628211 | 8.4:-80796581 | MS.gene62781:CDS |
AGAGTACTTGGCTCTGACTG+GGG | 0.633308 | 8.4:-80796615 | MS.gene62781:CDS |
TTGCAAGTCGGAATGTCCCA+GGG | 0.633890 | 8.4:+80798748 | None:intergenic |
GAGGGCACGTGTAGTGGACA+AGG | 0.637439 | 8.4:-80794121 | MS.gene62781:CDS |
TATTTGGGATAGATACGAGA+AGG | 0.644999 | 8.4:-80794322 | MS.gene62781:intron |
CTGACTGGGGAAAAGCTCAA+CGG | 0.647916 | 8.4:-80796602 | MS.gene62781:CDS |
GCACATAAATGGTACCTTTG+GGG | 0.649601 | 8.4:+80794092 | None:intergenic |
GAGTAGAGATGGTTGCATGT+GGG | 0.656634 | 8.4:-80796580 | MS.gene62781:CDS |
AGTTGCCGCAGGTGAAACCA+AGG | 0.659546 | 8.4:-80794521 | MS.gene62781:CDS |
AAATCCAATAAGAATTTCAG+GGG | 0.668222 | 8.4:+80798057 | None:intergenic |
GCCGCAGTAGTGTACTACAA+AGG | 0.697751 | 8.4:-80796329 | MS.gene62781:intron |
GCTTCAGATATGTACCAATG+AGG | 0.698029 | 8.4:+80798930 | None:intergenic |
GATATCTGGGGACTTCTGTG+AGG | 0.705454 | 8.4:-80794230 | MS.gene62781:intron |
TATGGTGATCTTGTACACCC+AGG | 0.707552 | 8.4:-80796351 | MS.gene62781:CDS |
ATAATATTACCTATGTGACC+AGG | 0.714051 | 8.4:+80797995 | None:intergenic |
AATTTCTAAACAGATATCTG+GGG | 0.714068 | 8.4:-80794242 | MS.gene62781:CDS |
ACCTTTGTAGTACACTACTG+CGG | 0.731986 | 8.4:+80796328 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATGAAAAAAGAAATA+GGG | + | chr8.4:80796293-80796312 | None:intergenic | 10.0% |
!!! | TGAATTTTTATATATAAACA+GGG | + | chr8.4:80798813-80798832 | None:intergenic | 10.0% |
!!! | TTGAATTTTTATATATAAAC+AGG | + | chr8.4:80798814-80798833 | None:intergenic | 10.0% |
!! | AAAAAAATAATGCACATAAA+TGG | + | chr8.4:80798726-80798745 | None:intergenic | 15.0% |
!! | AAAATTTGTAAATTGGAATT+TGG | - | chr8.4:80794564-80794583 | MS.gene62781:intron | 15.0% |
!! | ATAATGTAATCAATCTATTT+GGG | - | chr8.4:80798467-80798486 | MS.gene62781:intron | 15.0% |
!! | ATAATTTAGCATAAAAAAAC+AGG | + | chr8.4:80793966-80793985 | None:intergenic | 15.0% |
!! | GAATTAATGAAAAAAGAAAT+AGG | + | chr8.4:80796294-80796313 | None:intergenic | 15.0% |
!! | TATAATGTAATCAATCTATT+TGG | - | chr8.4:80798466-80798485 | MS.gene62781:intron | 15.0% |
!! | TCAATTATGTTAAAAATAAG+AGG | + | chr8.4:80796061-80796080 | None:intergenic | 15.0% |
!! | TGTTAATATCAAATCATAAA+TGG | - | chr8.4:80794526-80794545 | MS.gene62781:CDS | 15.0% |
!!! | AAAAAATCTTTGAAAGTTAA+GGG | + | chr8.4:80795408-80795427 | None:intergenic | 15.0% |
!!! | AATAATGATCATTTTTAAAG+AGG | + | chr8.4:80796638-80796657 | None:intergenic | 15.0% |
!!! | ATATTTTCCTATTTTTCATT+TGG | + | chr8.4:80796919-80796938 | None:intergenic | 15.0% |
!!! | ATCATTTTTAAATTTCCAAT+AGG | - | chr8.4:80798259-80798278 | MS.gene62781:intron | 15.0% |
!!! | TAAAAAATCTTTGAAAGTTA+AGG | + | chr8.4:80795409-80795428 | None:intergenic | 15.0% |
!!! | TTAACTTTCAAAGATTTTTT+AGG | - | chr8.4:80795408-80795427 | MS.gene62781:intron | 15.0% |
!!! | TTAATTTGAATTTCCTTATA+GGG | - | chr8.4:80798657-80798676 | MS.gene62781:intron | 15.0% |
!!! | TTTTCAGATTTAAAATTCAT+TGG | - | chr8.4:80798752-80798771 | MS.gene62781:CDS | 15.0% |
!! | AAAAAGAACAAAGCAATAAA+AGG | + | chr8.4:80795607-80795626 | None:intergenic | 20.0% |
!! | AATACTTGATGTGATAAATA+AGG | + | chr8.4:80795985-80796004 | None:intergenic | 20.0% |
!! | ATAAGCTTCTATATTACTAA+AGG | + | chr8.4:80794241-80794260 | None:intergenic | 20.0% |
!! | GGAACAAAAAATTTGTAAAT+TGG | - | chr8.4:80794557-80794576 | MS.gene62781:intron | 20.0% |
!! | GTTTGCTTAATTGTATTATT+GGG | - | chr8.4:80794381-80794400 | MS.gene62781:intron | 20.0% |
!! | TAGGTAAGTATATATATTTG+TGG | - | chr8.4:80797980-80797999 | MS.gene62781:intron | 20.0% |
!! | TATGAAATAATTGAGAATGA+TGG | + | chr8.4:80793924-80793943 | None:intergenic | 20.0% |
!! | TGTTTGCTTAATTGTATTAT+TGG | - | chr8.4:80794380-80794399 | MS.gene62781:intron | 20.0% |
!! | TTACAAGTTCATAGAATTAT+TGG | - | chr8.4:80795866-80795885 | MS.gene62781:intron | 20.0% |
!!! | AATTTATATCATTGCTGTTT+AGG | + | chr8.4:80795895-80795914 | None:intergenic | 20.0% |
!!! | ACAATATTTTGCTATAATCA+GGG | - | chr8.4:80795704-80795723 | MS.gene62781:intron | 20.0% |
!!! | ATTTATTTATACTTTTCTCC+AGG | - | chr8.4:80793984-80794003 | MS.gene62781:intron | 20.0% |
!!! | ATTTTAAAACCCCTAATTAT+TGG | + | chr8.4:80797114-80797133 | None:intergenic | 20.0% |
!!! | CAAGTTTTGACAATTTTATA+TGG | - | chr8.4:80794997-80795016 | MS.gene62781:intron | 20.0% |
!!! | GTTAATTTGAATTTCCTTAT+AGG | - | chr8.4:80798656-80798675 | MS.gene62781:intron | 20.0% |
!!! | TACAATATTTTGCTATAATC+AGG | - | chr8.4:80795703-80795722 | MS.gene62781:intron | 20.0% |
!!! | TAGAACAAAAAGATATGTTT+TGG | - | chr8.4:80798155-80798174 | MS.gene62781:intron | 20.0% |
!!! | TATACTTTTATATACCTCAT+TGG | - | chr8.4:80793860-80793879 | MS.gene62781:CDS | 20.0% |
!!! | TTGTCATATGTGATAATTTT+TGG | - | chr8.4:80798047-80798066 | MS.gene62781:CDS | 20.0% |
!!! | TTTCCTCTTTTGTTAATTTA+GGG | + | chr8.4:80796945-80796964 | None:intergenic | 20.0% |
!!! | TTTTTAGGAAAAATCTTATC+TGG | - | chr8.4:80795423-80795442 | MS.gene62781:intron | 20.0% |
! | AAACATGTTAAAGCTAACTT+TGG | + | chr8.4:80797824-80797843 | None:intergenic | 25.0% |
! | AAATCCAATAAGAATTTCAG+GGG | + | chr8.4:80794750-80794769 | None:intergenic | 25.0% |
! | AACAATTAACAAATACCCTT+AGG | - | chr8.4:80796877-80796896 | MS.gene62781:intron | 25.0% |
! | AAGCTTCTTTAAGTCTATTT+AGG | + | chr8.4:80798328-80798347 | None:intergenic | 25.0% |
! | AATTTCTAAACAGATATCTG+GGG | - | chr8.4:80798562-80798581 | MS.gene62781:intron | 25.0% |
! | ACAAATATAGAAAACGAAGA+GGG | + | chr8.4:80797547-80797566 | None:intergenic | 25.0% |
! | ACAGGTATAAAACGTAAATA+TGG | + | chr8.4:80795159-80795178 | None:intergenic | 25.0% |
! | AGAGATGAAAATTAGAAGAA+GGG | + | chr8.4:80795661-80795680 | None:intergenic | 25.0% |
! | AGCTTCTTTAAGTCTATTTA+GGG | + | chr8.4:80798327-80798346 | None:intergenic | 25.0% |
! | ATACATAAATAATGAGCAAG+AGG | + | chr8.4:80794109-80794128 | None:intergenic | 25.0% |
! | ATCAAATCATAAATGGAAAG+CGG | - | chr8.4:80794533-80794552 | MS.gene62781:intron | 25.0% |
! | ATGAACAAAATCAATCAAAG+TGG | + | chr8.4:80795090-80795109 | None:intergenic | 25.0% |
! | CAATTTCTAAACAGATATCT+GGG | - | chr8.4:80798561-80798580 | MS.gene62781:intron | 25.0% |
! | CTATAGGACAAAATAAAAGA+AGG | + | chr8.4:80796355-80796374 | None:intergenic | 25.0% |
! | CTATATTACTAAAGGTAATG+CGG | + | chr8.4:80794233-80794252 | None:intergenic | 25.0% |
! | GAAATCCAATAAGAATTTCA+GGG | + | chr8.4:80794751-80794770 | None:intergenic | 25.0% |
! | GAAATTCTAGATAAATGCTT+TGG | - | chr8.4:80796788-80796807 | MS.gene62781:intron | 25.0% |
! | GATATGCATTGTATAAATCT+TGG | - | chr8.4:80794671-80794690 | MS.gene62781:intron | 25.0% |
! | GTATAAACATTGTGAATTTC+TGG | - | chr8.4:80798596-80798615 | MS.gene62781:intron | 25.0% |
! | GTGAATTAAATATATGCAGT+GGG | - | chr8.4:80798861-80798880 | MS.gene62781:intron | 25.0% |
! | GTTCAACAACATCATAATTT+AGG | + | chr8.4:80797674-80797693 | None:intergenic | 25.0% |
! | TAAGTATATATATTTGTGGC+TGG | - | chr8.4:80797984-80798003 | MS.gene62781:intron | 25.0% |
! | TCATCAATTACATCTTCAAT+TGG | + | chr8.4:80796120-80796139 | None:intergenic | 25.0% |
! | TGAAATCCAATAAGAATTTC+AGG | + | chr8.4:80794752-80794771 | None:intergenic | 25.0% |
! | TGATGAAAGAATTGCTTAAT+AGG | - | chr8.4:80796031-80796050 | MS.gene62781:intron | 25.0% |
! | TGCAAAGAAGAAATTGTATT+AGG | + | chr8.4:80798778-80798797 | None:intergenic | 25.0% |
! | TGTGAATTAAATATATGCAG+TGG | - | chr8.4:80798860-80798879 | MS.gene62781:intron | 25.0% |
! | TGTTGTAAAAAATTGTTTGC+AGG | + | chr8.4:80793837-80793856 | None:intergenic | 25.0% |
! | TTTAAGAGTCCAATAATTAG+GGG | - | chr8.4:80797102-80797121 | MS.gene62781:intron | 25.0% |
! | TTTCCCTAAATTAACAAAAG+AGG | - | chr8.4:80796939-80796958 | MS.gene62781:intron | 25.0% |
!! | ATTGTTGTTATCTGTAAGTT+AGG | - | chr8.4:80794142-80794161 | MS.gene62781:intron | 25.0% |
!! | ATTTATGTATTTTCCTTTCG+TGG | - | chr8.4:80794119-80794138 | MS.gene62781:CDS | 25.0% |
!! | ATTTTGTAAAGAAGAGTTTG+TGG | + | chr8.4:80797579-80797598 | None:intergenic | 25.0% |
!! | CTATTTTCTTATCTTCTTTC+AGG | + | chr8.4:80796667-80796686 | None:intergenic | 25.0% |
!! | CTTTAAGAGTCCAATAATTA+GGG | - | chr8.4:80797101-80797120 | MS.gene62781:intron | 25.0% |
!! | CTTTCCTCTTTTGTTAATTT+AGG | + | chr8.4:80796946-80796965 | None:intergenic | 25.0% |
!! | TCATCATAGAATGATAGTTT+TGG | - | chr8.4:80795182-80795201 | MS.gene62781:intron | 25.0% |
!! | TCTTTAAGAGTCCAATAATT+AGG | - | chr8.4:80797100-80797119 | MS.gene62781:intron | 25.0% |
!! | TGATTGATGAGAAATTTTCA+TGG | - | chr8.4:80796078-80796097 | MS.gene62781:intron | 25.0% |
!! | TTAGTCTTTCTTTGTTTCAT+TGG | - | chr8.4:80796149-80796168 | MS.gene62781:intron | 25.0% |
!!! | AAAGTTAGCTTTAACATGTT+TGG | - | chr8.4:80797823-80797842 | MS.gene62781:intron | 25.0% |
!!! | AAGCCAAATAGAGAATTTTT+TGG | - | chr8.4:80797453-80797472 | MS.gene62781:intron | 25.0% |
!!! | AATTCTCTATTTGGCTTTTT+TGG | + | chr8.4:80797450-80797469 | None:intergenic | 25.0% |
!!! | ACTTTGATTGATTTTGTTCA+TGG | - | chr8.4:80795089-80795108 | MS.gene62781:intron | 25.0% |
!!! | AGCCAAATAGAGAATTTTTT+GGG | - | chr8.4:80797454-80797473 | MS.gene62781:intron | 25.0% |
!!! | ATTCTCTATTTGGCTTTTTT+GGG | + | chr8.4:80797449-80797468 | None:intergenic | 25.0% |
!!! | CAATATTTTGCTATAATCAG+GGG | - | chr8.4:80795705-80795724 | MS.gene62781:intron | 25.0% |
!!! | TAACTAGTTTGTCTTCATTT+TGG | - | chr8.4:80794644-80794663 | MS.gene62781:intron | 25.0% |
!!! | TCTAGTTTTCTACTTAACAT+AGG | - | chr8.4:80795759-80795778 | MS.gene62781:intron | 25.0% |
!!! | TCTTTGTTTTGATTTGAAGA+TGG | + | chr8.4:80796613-80796632 | None:intergenic | 25.0% |
!!! | TCTTTTATTTTGTCCTATAG+AGG | - | chr8.4:80796355-80796374 | MS.gene62781:CDS | 25.0% |
!!! | TTACTATGCTTTTAGAGTTT+AGG | + | chr8.4:80797929-80797948 | None:intergenic | 25.0% |
!!! | TTCTTTTTGTTTTCTGTTCA+CGG | - | chr8.4:80795619-80795638 | MS.gene62781:intron | 25.0% |
AAACAAAGAAAGACTAACAG+AGG | + | chr8.4:80796146-80796165 | None:intergenic | 30.0% | |
AAATCAGATTGTTGAGATCT+GGG | - | chr8.4:80797706-80797725 | MS.gene62781:intron | 30.0% | |
AAATTGCTTGTAAAGTCATC+CGG | + | chr8.4:80798547-80798566 | None:intergenic | 30.0% | |
AATAGAGACTTCAATTTGAG+AGG | - | chr8.4:80798088-80798107 | MS.gene62781:intron | 30.0% | |
AATTACAGTTTAACCTAACG+TGG | + | chr8.4:80796982-80797001 | None:intergenic | 30.0% | |
ACAAAGCAATAAAAGGAACT+AGG | + | chr8.4:80795600-80795619 | None:intergenic | 30.0% | |
AGGTGATGTGTTAGTAAAAA+AGG | + | chr8.4:80797496-80797515 | None:intergenic | 30.0% | |
AGTGATCAGTTCATTTAAAC+TGG | - | chr8.4:80795236-80795255 | MS.gene62781:intron | 30.0% | |
AGTTTCAACAACAGTAGAAT+TGG | + | chr8.4:80797884-80797903 | None:intergenic | 30.0% | |
ATAATATTACCTATGTGACC+AGG | + | chr8.4:80794812-80794831 | None:intergenic | 30.0% | |
ATAGCATATCTGCTTCTAAA+CGG | + | chr8.4:80797171-80797190 | None:intergenic | 30.0% | |
ATAGTTAGTATACTCACATG+CGG | + | chr8.4:80793899-80793918 | None:intergenic | 30.0% | |
ATCATTCTATGATGAAGAAC+AGG | + | chr8.4:80795177-80795196 | None:intergenic | 30.0% | |
ATGATGTTGTTGAACATTAC+AGG | - | chr8.4:80797679-80797698 | MS.gene62781:intron | 30.0% | |
CAAATATAGAAAACGAAGAG+GGG | + | chr8.4:80797546-80797565 | None:intergenic | 30.0% | |
CTTAAGGTTAGTGTTAGTTA+TGG | - | chr8.4:80795731-80795750 | MS.gene62781:intron | 30.0% | |
GAAAAGAAGAGAAAGAAAAC+AGG | + | chr8.4:80798425-80798444 | None:intergenic | 30.0% | |
GAAGACAAACTAGTTAAACT+AGG | + | chr8.4:80794640-80794659 | None:intergenic | 30.0% | |
GACAAATATAGAAAACGAAG+AGG | + | chr8.4:80797548-80797567 | None:intergenic | 30.0% | |
GAGAGATGAAAATTAGAAGA+AGG | + | chr8.4:80795662-80795681 | None:intergenic | 30.0% | |
GATTACATTATAGAAGCAGT+TGG | + | chr8.4:80798458-80798477 | None:intergenic | 30.0% | |
GCAATTTCTAAACAGATATC+TGG | - | chr8.4:80798560-80798579 | MS.gene62781:intron | 30.0% | |
GGTGATGTGTTAGTAAAAAA+GGG | + | chr8.4:80797495-80797514 | None:intergenic | 30.0% | |
GTAATTTCAGTTGACAATCA+GGG | - | chr8.4:80797372-80797391 | MS.gene62781:intron | 30.0% | |
GTGATAAGTTATAGCTAAGT+CGG | + | chr8.4:80794706-80794725 | None:intergenic | 30.0% | |
GTGATCAGTTCATTTAAACT+GGG | - | chr8.4:80795237-80795256 | MS.gene62781:intron | 30.0% | |
GTGATTTCAGAATATGTTAG+TGG | - | chr8.4:80794176-80794195 | MS.gene62781:intron | 30.0% | |
GTTAAAGCTAACTTTGGATA+TGG | + | chr8.4:80797818-80797837 | None:intergenic | 30.0% | |
TAATTTCAGTTGACAATCAG+GGG | - | chr8.4:80797373-80797392 | MS.gene62781:intron | 30.0% | |
TATAATCCAAAGTCCTACAT+CGG | + | chr8.4:80794287-80794306 | None:intergenic | 30.0% | |
TATGTGTTGTGACTTACATT+TGG | - | chr8.4:80798206-80798225 | MS.gene62781:intron | 30.0% | |
TCACAACACATACAAAAGAA+AGG | + | chr8.4:80798198-80798217 | None:intergenic | 30.0% | |
TCCCTCTTTAGCAAAATTTA+GGG | + | chr8.4:80797007-80797026 | None:intergenic | 30.0% | |
TGAAAATTAGAAGAAGGGAA+AGG | + | chr8.4:80795656-80795675 | None:intergenic | 30.0% | |
TGATGTTGTTGAACATTACA+GGG | - | chr8.4:80797680-80797699 | MS.gene62781:intron | 30.0% | |
TGATTTGAAGATGGAAAGAA+AGG | + | chr8.4:80796604-80796623 | None:intergenic | 30.0% | |
TGCCCAAAAAATTCTCTATT+TGG | + | chr8.4:80797459-80797478 | None:intergenic | 30.0% | |
TGTAATTTCAGTTGACAATC+AGG | - | chr8.4:80797371-80797390 | MS.gene62781:intron | 30.0% | |
TGTAGGACTTTGGATTATAT+AGG | - | chr8.4:80794288-80794307 | MS.gene62781:CDS | 30.0% | |
TTATCTGTAAGTTAGGACTT+AGG | - | chr8.4:80794149-80794168 | MS.gene62781:intron | 30.0% | |
TTCCCTCTTTAGCAAAATTT+AGG | + | chr8.4:80797008-80797027 | None:intergenic | 30.0% | |
TTGAATAAAATGCTCAGAGA+AGG | + | chr8.4:80795384-80795403 | None:intergenic | 30.0% | |
TTGTAAATTGGAATTTGGAG+TGG | - | chr8.4:80794569-80794588 | MS.gene62781:intron | 30.0% | |
! | ACCCTAAATTTTGCTAAAGA+GGG | - | chr8.4:80797003-80797022 | MS.gene62781:intron | 30.0% |
! | ATTACAACTAAGAGCTTTAG+TGG | + | chr8.4:80797213-80797232 | None:intergenic | 30.0% |
! | CAACACATTTCTGCATTTTT+AGG | - | chr8.4:80795483-80795502 | MS.gene62781:intron | 30.0% |
! | CTTTAACTTAAAGCAGAAGA+TGG | + | chr8.4:80794856-80794875 | None:intergenic | 30.0% |
! | GCTTTTGCCAAATGAAAAAT+AGG | - | chr8.4:80796909-80796928 | MS.gene62781:intron | 30.0% |
! | GTTTTCTACTTAACATAGGT+TGG | - | chr8.4:80795763-80795782 | MS.gene62781:intron | 30.0% |
! | TACCCTAAATTTTGCTAAAG+AGG | - | chr8.4:80797002-80797021 | MS.gene62781:intron | 30.0% |
!! | AAGAGTCTTATTGGTACAAT+CGG | - | chr8.4:80795112-80795131 | MS.gene62781:intron | 30.0% |
!! | CAAGTCATAGTCTTGTAAAA+AGG | + | chr8.4:80795310-80795329 | None:intergenic | 30.0% |
!! | CTAAATTTTGAAGATTGACC+CGG | + | chr8.4:80795805-80795824 | None:intergenic | 30.0% |
!!! | ATGATAGTTTTGGCATTGTT+AGG | - | chr8.4:80795192-80795211 | MS.gene62781:intron | 30.0% |
!!! | GCTTCTACTTTTTTCTTTTC+AGG | - | chr8.4:80796762-80796781 | MS.gene62781:intron | 30.0% |
!!! | TAACTTATCACCTTTTTTGC+AGG | - | chr8.4:80794715-80794734 | MS.gene62781:intron | 30.0% |
!!! | TCTTTTTGTTTTCTGTTCAC+GGG | - | chr8.4:80795620-80795639 | MS.gene62781:intron | 30.0% |
!!! | TTCTCTATTTGGCTTTTTTG+GGG | + | chr8.4:80797448-80797467 | None:intergenic | 30.0% |
AAAAGCTAATCAGTGCCTAA+GGG | + | chr8.4:80796895-80796914 | None:intergenic | 35.0% | |
AAAATTAGACCCAGGTAGAA+GGG | - | chr8.4:80797129-80797148 | MS.gene62781:intron | 35.0% | |
AAACTACACAAGTATGAGTG+TGG | - | chr8.4:80797899-80797918 | MS.gene62781:intron | 35.0% | |
AAAGGTTTCTCAAGATATGG+TGG | - | chr8.4:80798900-80798919 | MS.gene62781:intron | 35.0% | |
AAAGTGGTTTCTATGACAGA+TGG | + | chr8.4:80796426-80796445 | None:intergenic | 35.0% | |
AAATCATAAATGGAAAGCGG+TGG | - | chr8.4:80794536-80794555 | MS.gene62781:intron | 35.0% | |
AAGGTTAGTGTTAGTTATGG+TGG | - | chr8.4:80795734-80795753 | MS.gene62781:intron | 35.0% | |
AAGTGGTTTCTATGACAGAT+GGG | + | chr8.4:80796425-80796444 | None:intergenic | 35.0% | |
AATTCTTCTGGATTCCTCTA+TGG | - | chr8.4:80795353-80795372 | MS.gene62781:intron | 35.0% | |
AATTTCCTTATAGGGAGTGA+GGG | - | chr8.4:80798665-80798684 | MS.gene62781:intron | 35.0% | |
ACACATGTACTACTTTCGAT+AGG | - | chr8.4:80797961-80797980 | MS.gene62781:intron | 35.0% | |
AGACTTCAATTTGAGAGGAT+CGG | - | chr8.4:80798093-80798112 | MS.gene62781:intron | 35.0% | |
AGATAACAACAATCCACGAA+AGG | + | chr8.4:80794135-80794154 | None:intergenic | 35.0% | |
AGGAGAAGTCATCTATGTAA+AGG | + | chr8.4:80794470-80794489 | None:intergenic | 35.0% | |
ATAAGGCTGGATAATAGCAT+TGG | + | chr8.4:80795968-80795987 | None:intergenic | 35.0% | |
ATGCACATAAATGGTACCTT+TGG | + | chr8.4:80798717-80798736 | None:intergenic | 35.0% | |
ATGTGCTGTACAATTGTCAT+TGG | + | chr8.4:80794349-80794368 | None:intergenic | 35.0% | |
ATTAACATATATGTGCCAGC+TGG | - | chr8.4:80797242-80797261 | MS.gene62781:intron | 35.0% | |
CAAACTAGTTAAACTAGGAG+AGG | + | chr8.4:80794635-80794654 | None:intergenic | 35.0% | |
CAAATCAGATTGTTGAGATC+TGG | - | chr8.4:80797705-80797724 | MS.gene62781:intron | 35.0% | |
CAAGAGAAAGAGATGAAAGA+GGG | + | chr8.4:80795838-80795857 | None:intergenic | 35.0% | |
CACTAATTGAAGAACAGCTT+GGG | - | chr8.4:80796382-80796401 | MS.gene62781:CDS | 35.0% | |
CAGCTTGAATATGTGTAAGT+GGG | - | chr8.4:80797309-80797328 | MS.gene62781:intron | 35.0% | |
CTTGATGTGATAAATAAGGC+TGG | + | chr8.4:80795981-80796000 | None:intergenic | 35.0% | |
GACTTGTCTGAAAAAGAGTT+TGG | - | chr8.4:80795324-80795343 | MS.gene62781:intron | 35.0% | |
GATCTCTATGCACTTAAAGA+GGG | - | chr8.4:80794965-80794984 | MS.gene62781:intron | 35.0% | |
GATGTTGTTGAACATTACAG+GGG | - | chr8.4:80797681-80797700 | MS.gene62781:intron | 35.0% | |
GGAAAAGGTTTCTCAAGATA+TGG | - | chr8.4:80798897-80798916 | MS.gene62781:intron | 35.0% | |
GTTTAGAAGCAGATATGCTA+TGG | - | chr8.4:80797170-80797189 | MS.gene62781:intron | 35.0% | |
GTTTAGCGTCTATTTCGATA+TGG | - | chr8.4:80794431-80794450 | MS.gene62781:intron | 35.0% | |
TAAAATTAGACCCAGGTAGA+AGG | - | chr8.4:80797128-80797147 | MS.gene62781:intron | 35.0% | |
TAACTTAAAGCAGAAGATGG+AGG | + | chr8.4:80794853-80794872 | None:intergenic | 35.0% | |
TACCACTATCAACATTTGCT+TGG | + | chr8.4:80794320-80794339 | None:intergenic | 35.0% | |
TATTCAAGTCTAACCACGTT+AGG | - | chr8.4:80796966-80796985 | MS.gene62781:intron | 35.0% | |
TCACTTTATCTTTCCGATGT+AGG | - | chr8.4:80794271-80794290 | MS.gene62781:CDS | 35.0% | |
TCAGCTTGAATATGTGTAAG+TGG | - | chr8.4:80797308-80797327 | MS.gene62781:intron | 35.0% | |
TCAGGTTCAAATTCAGTTAG+AGG | + | chr8.4:80798940-80798959 | None:intergenic | 35.0% | |
TGAAGAGATTGTTGATGCAT+TGG | - | chr8.4:80796823-80796842 | MS.gene62781:intron | 35.0% | |
TGATCTCTATGCACTTAAAG+AGG | - | chr8.4:80794964-80794983 | MS.gene62781:intron | 35.0% | |
TGCACATAAATGGTACCTTT+GGG | + | chr8.4:80798716-80798735 | None:intergenic | 35.0% | |
TGCATAACATGTGATATCGA+TGG | + | chr8.4:80795945-80795964 | None:intergenic | 35.0% | |
TGGAATAGTTGTGCAATAAC+CGG | - | chr8.4:80795783-80795802 | MS.gene62781:intron | 35.0% | |
TGTAAAGAAGAGTTTGTGGT+AGG | + | chr8.4:80797575-80797594 | None:intergenic | 35.0% | |
TGTTCAATCCCTTTGCATAT+CGG | + | chr8.4:80795564-80795583 | None:intergenic | 35.0% | |
TTAGAAGAAGGGAAAGGATA+AGG | + | chr8.4:80795650-80795669 | None:intergenic | 35.0% | |
TTTGAGGAGGAAAAAAAACG+AGG | + | chr8.4:80797516-80797535 | None:intergenic | 35.0% | |
TTTGTGGGTAACTCTAAATC+AGG | + | chr8.4:80798958-80798977 | None:intergenic | 35.0% | |
! | AGGCAATTCAAGTTCAGAAA+TGG | - | chr8.4:80795458-80795477 | MS.gene62781:intron | 35.0% |
! | GTTTGGAATCTGAATTCTTC+TGG | - | chr8.4:80795341-80795360 | MS.gene62781:intron | 35.0% |
! | TACCAAGCAAATGTTGATAG+TGG | - | chr8.4:80794315-80794334 | MS.gene62781:intron | 35.0% |
! | TATTTGGGATAGATACGAGA+AGG | - | chr8.4:80798482-80798501 | MS.gene62781:intron | 35.0% |
! | TGAGAAACCTTTTCCAAAGT+TGG | + | chr8.4:80798892-80798911 | None:intergenic | 35.0% |
! | TGTTCATGGAAGAGTCTTAT+TGG | - | chr8.4:80795103-80795122 | MS.gene62781:intron | 35.0% |
! | TTTGGATATGGCTTTGCTTT+GGG | + | chr8.4:80797806-80797825 | None:intergenic | 35.0% |
!! | ACATTTCTGCATTTTTAGGC+AGG | - | chr8.4:80795487-80795506 | MS.gene62781:intron | 35.0% |
!! | ACCTTTCTTTGGTGCTATAT+AGG | - | chr8.4:80795511-80795530 | MS.gene62781:intron | 35.0% |
!! | AGAGTCTTATTGGTACAATC+GGG | - | chr8.4:80795113-80795132 | MS.gene62781:intron | 35.0% |
!! | ATCACCATACTGTTCTAAAG+TGG | + | chr8.4:80796442-80796461 | None:intergenic | 35.0% |
!! | CCTTTCTTTGGTGCTATATA+GGG | - | chr8.4:80795512-80795531 | MS.gene62781:intron | 35.0% |
!! | GAAACCACTTTAGAACAGTA+TGG | - | chr8.4:80796435-80796454 | MS.gene62781:intron | 35.0% |
!! | TATTTTGCTATAATCAGGGG+TGG | - | chr8.4:80795708-80795727 | MS.gene62781:intron | 35.0% |
!! | TGGGAAAAGCATTATGTGTT+TGG | - | chr8.4:80794400-80794419 | MS.gene62781:intron | 35.0% |
!!! | AGATATGTTTTGGCTTCTCT+TGG | - | chr8.4:80798165-80798184 | MS.gene62781:intron | 35.0% |
!!! | CTTTTTGTTTTCTGTTCACG+GGG | - | chr8.4:80795621-80795640 | MS.gene62781:intron | 35.0% |
!!! | TGCATAATGCATGCTTTTTC+TGG | - | chr8.4:80797738-80797757 | MS.gene62781:intron | 35.0% |
AAAACAGGAGATTCGATACG+AGG | + | chr8.4:80793951-80793970 | None:intergenic | 40.0% | |
AAAGGAACTCACAGATCTCA+AGG | + | chr8.4:80798372-80798391 | None:intergenic | 40.0% | |
AAGAGAAAGACGGTAACTGA+GGG | + | chr8.4:80797624-80797643 | None:intergenic | 40.0% | |
AAGGAAACCTTCAAGCTCAA+TGG | + | chr8.4:80798353-80798372 | None:intergenic | 40.0% | |
ACATTATAGAAGCAGTTGGC+TGG | + | chr8.4:80798454-80798473 | None:intergenic | 40.0% | |
ACCTTTGTAGTACACTACTG+CGG | + | chr8.4:80796479-80796498 | None:intergenic | 40.0% | |
AGACAAACCCCATGTTTGTA+TGG | + | chr8.4:80798013-80798032 | None:intergenic | 40.0% | |
AGATGTTAATTATGGCCAGC+TGG | + | chr8.4:80797260-80797279 | None:intergenic | 40.0% | |
AGTCATCTCCGATATGCAAA+GGG | - | chr8.4:80795553-80795572 | MS.gene62781:intron | 40.0% | |
AGTCGACAGAATGTTCTCTT+TGG | - | chr8.4:80796701-80796720 | MS.gene62781:intron | 40.0% | |
ATACTTCCACTAGGCAATCA+GGG | + | chr8.4:80797420-80797439 | None:intergenic | 40.0% | |
ATATGCTATGGCTTACTAGC+TGG | - | chr8.4:80797182-80797201 | MS.gene62781:intron | 40.0% | |
ATCTTTCCGATGTAGGACTT+TGG | - | chr8.4:80794278-80794297 | MS.gene62781:CDS | 40.0% | |
CAAAAGCTAATCAGTGCCTA+AGG | + | chr8.4:80796896-80796915 | None:intergenic | 40.0% | |
CAATCTCTTCAACTGTGTCA+TGG | + | chr8.4:80796814-80796833 | None:intergenic | 40.0% | |
CAATTAGTGGAAGCCTCTAT+AGG | + | chr8.4:80796371-80796390 | None:intergenic | 40.0% | |
CACTCAAATATGGTGCAGAA+AGG | + | chr8.4:80794490-80794509 | None:intergenic | 40.0% | |
CCAAGCTGTTCTTCAATTAG+TGG | + | chr8.4:80796384-80796403 | None:intergenic | 40.0% | |
CCACTAATTGAAGAACAGCT+TGG | - | chr8.4:80796381-80796400 | MS.gene62781:CDS | 40.0% | |
CCCTATATAGCACCAAAGAA+AGG | + | chr8.4:80795515-80795534 | None:intergenic | 40.0% | |
CTAGACATCAGACAAGCAAA+AGG | + | chr8.4:80798390-80798409 | None:intergenic | 40.0% | |
CTGGTTTCCATACAAACATG+GGG | - | chr8.4:80798003-80798022 | MS.gene62781:intron | 40.0% | |
CTTCTCAATGGCATTACCAT+GGG | - | chr8.4:80794012-80794031 | MS.gene62781:intron | 40.0% | |
CTTTCTGCACCATATTTGAG+TGG | - | chr8.4:80794488-80794507 | MS.gene62781:CDS | 40.0% | |
GAAACAGCTATCCCAATTAG+AGG | + | chr8.4:80797074-80797093 | None:intergenic | 40.0% | |
GAATTTCCTTATAGGGAGTG+AGG | - | chr8.4:80798664-80798683 | MS.gene62781:intron | 40.0% | |
GACTTCAATTTGAGAGGATC+GGG | - | chr8.4:80798094-80798113 | MS.gene62781:intron | 40.0% | |
GCAAGAGAAAGAGATGAAAG+AGG | + | chr8.4:80795839-80795858 | None:intergenic | 40.0% | |
GCACATAAATGGTACCTTTG+GGG | + | chr8.4:80798715-80798734 | None:intergenic | 40.0% | |
GCGAGCACAGATGTTAATTA+TGG | + | chr8.4:80797268-80797287 | None:intergenic | 40.0% | |
GCTTCAGATATGTACCAATG+AGG | + | chr8.4:80793877-80793896 | None:intergenic | 40.0% | |
GGAAACTCTTGCCTCTAATT+GGG | - | chr8.4:80797060-80797079 | MS.gene62781:intron | 40.0% | |
GGAATAGTTGTGCAATAACC+GGG | - | chr8.4:80795784-80795803 | MS.gene62781:intron | 40.0% | |
GTAAGTGGGATGATGTGTAT+GGG | - | chr8.4:80797323-80797342 | MS.gene62781:intron | 40.0% | |
GTCGCAAAAACCTGCAAAAA+AGG | + | chr8.4:80794728-80794747 | None:intergenic | 40.0% | |
GTGCTATATAGGGCTAGATA+AGG | - | chr8.4:80795522-80795541 | MS.gene62781:intron | 40.0% | |
TAAAAAGATGCTGCAGCATC+AGG | + | chr8.4:80794776-80794795 | None:intergenic | 40.0% | |
TATACTTCCACTAGGCAATC+AGG | + | chr8.4:80797421-80797440 | None:intergenic | 40.0% | |
TCTTCTCAATGGCATTACCA+TGG | - | chr8.4:80794011-80794030 | MS.gene62781:intron | 40.0% | |
TGAAGAACAGCTTGGGAAAT+TGG | - | chr8.4:80796389-80796408 | MS.gene62781:CDS | 40.0% | |
TGTAAGTGGGATGATGTGTA+TGG | - | chr8.4:80797322-80797341 | MS.gene62781:intron | 40.0% | |
TTAACCCCTCTGTTTGGATT+GGG | - | chr8.4:80794885-80794904 | MS.gene62781:intron | 40.0% | |
TTATCTGGCAATGTGTTCAC+AGG | - | chr8.4:80795438-80795457 | MS.gene62781:intron | 40.0% | |
TTTAACCCCTCTGTTTGGAT+TGG | - | chr8.4:80794884-80794903 | MS.gene62781:intron | 40.0% | |
! | AAATGCTTCACGGGATTTTG+TGG | + | chr8.4:80798974-80798993 | None:intergenic | 40.0% |
! | AATGCTTCACGGGATTTTGT+GGG | + | chr8.4:80798973-80798992 | None:intergenic | 40.0% |
! | ATTGGACTCTTAAAGAGTGC+AGG | + | chr8.4:80797096-80797115 | None:intergenic | 40.0% |
! | CAACTTTTAACCCCTCTGTT+TGG | - | chr8.4:80794879-80794898 | MS.gene62781:intron | 40.0% |
! | CATTGGTTGTTGTTGTATGC+AGG | - | chr8.4:80796166-80796185 | MS.gene62781:intron | 40.0% |
! | CTTTGGATATGGCTTTGCTT+TGG | + | chr8.4:80797807-80797826 | None:intergenic | 40.0% |
! | GAAACCTTTTCCAAAGTTGG+AGG | + | chr8.4:80798889-80798908 | None:intergenic | 40.0% |
! | GCTGGTTTCCATACAAACAT+GGG | - | chr8.4:80798002-80798021 | MS.gene62781:intron | 40.0% |
! | GGTTGTGGATGCATTCTTTT+TGG | + | chr8.4:80797785-80797804 | None:intergenic | 40.0% |
! | TTTTACCTTTCACGTCTACC+TGG | - | chr8.4:80794791-80794810 | MS.gene62781:intron | 40.0% |
!! | ATCCCGTGAAGCATTTTTGT+AGG | - | chr8.4:80798978-80798997 | MS.gene62781:CDS | 40.0% |
!! | CAGTTTTGTCAGTTGCAAGT+CGG | + | chr8.4:80794071-80794090 | None:intergenic | 40.0% |
!! | TCCCGTGAAGCATTTTTGTA+GGG | - | chr8.4:80798979-80798998 | MS.gene62781:CDS | 40.0% |
!!! | ATGTGTATGGGTTGGTTTTG+GGG | - | chr8.4:80797335-80797354 | MS.gene62781:intron | 40.0% |
!!! | GATGTGTATGGGTTGGTTTT+GGG | - | chr8.4:80797334-80797353 | MS.gene62781:intron | 40.0% |
!!! | GGGGTTTTAAAATTAGACCC+AGG | - | chr8.4:80797121-80797140 | MS.gene62781:intron | 40.0% |
!!! | TGATGTGTATGGGTTGGTTT+TGG | - | chr8.4:80797333-80797352 | MS.gene62781:intron | 40.0% |
AAAGCTCAACGGAGTAGAGA+TGG | - | chr8.4:80796213-80796232 | MS.gene62781:intron | 45.0% | |
AACCTCCCAATCCAAACAGA+GGG | + | chr8.4:80794893-80794912 | None:intergenic | 45.0% | |
ACGAAAAGCTACGAGAGAGA+AGG | - | chr8.4:80796546-80796565 | MS.gene62781:intron | 45.0% | |
AGAAATGCACCATGCATCCT+TGG | + | chr8.4:80798303-80798322 | None:intergenic | 45.0% | |
AGCTTCTCCATTGAGCTTGA+AGG | - | chr8.4:80798343-80798362 | MS.gene62781:intron | 45.0% | |
CAAGAGAAAGACGGTAACTG+AGG | + | chr8.4:80797625-80797644 | None:intergenic | 45.0% | |
CAAGAGTTTCCCACATCACT+TGG | + | chr8.4:80797051-80797070 | None:intergenic | 45.0% | |
CAGAGAAGGAATCACCATAG+AGG | + | chr8.4:80795370-80795389 | None:intergenic | 45.0% | |
CAGTCATCTCCGATATGCAA+AGG | - | chr8.4:80795552-80795571 | MS.gene62781:intron | 45.0% | |
CATTTCACGCCACAATGCAA+GGG | + | chr8.4:80794202-80794221 | None:intergenic | 45.0% | |
CGAAAAGCTACGAGAGAGAA+GGG | - | chr8.4:80796547-80796566 | MS.gene62781:intron | 45.0% | |
CTAACGCCACCACTCAAATA+TGG | + | chr8.4:80794500-80794519 | None:intergenic | 45.0% | |
CTATAATCAGGGGTGGCTTA+AGG | - | chr8.4:80795715-80795734 | MS.gene62781:intron | 45.0% | |
CTCTATGCACTTAAAGAGGG+AGG | - | chr8.4:80794968-80794987 | MS.gene62781:intron | 45.0% | |
GAGGTGCAACAAGAGAAAGA+CGG | + | chr8.4:80797634-80797653 | None:intergenic | 45.0% | |
GAGTAGAGATGGTTGCATGT+GGG | - | chr8.4:80796224-80796243 | MS.gene62781:intron | 45.0% | |
GCGACCCCTGAAATTCTTAT+TGG | - | chr8.4:80794743-80794762 | MS.gene62781:intron | 45.0% | |
GGGAAACTCTTGCCTCTAAT+TGG | - | chr8.4:80797059-80797078 | MS.gene62781:intron | 45.0% | |
TATGCACTTAAAGAGGGAGG+AGG | - | chr8.4:80794971-80794990 | MS.gene62781:intron | 45.0% | |
TATGGTGATCTTGTACACCC+AGG | - | chr8.4:80796453-80796472 | MS.gene62781:intron | 45.0% | |
TCAATTTGAGAGGATCGGGA+TGG | - | chr8.4:80798098-80798117 | MS.gene62781:intron | 45.0% | |
TCTGCACCATATTTGAGTGG+TGG | - | chr8.4:80794491-80794510 | MS.gene62781:CDS | 45.0% | |
TGGCATTGTTAGGCTATCGA+TGG | - | chr8.4:80795202-80795221 | MS.gene62781:intron | 45.0% | |
TTCTATGACAGATGGGTCGT+CGG | + | chr8.4:80796418-80796437 | None:intergenic | 45.0% | |
TTTAGGCAGGCACCTTTCTT+TGG | - | chr8.4:80795500-80795519 | MS.gene62781:intron | 45.0% | |
! | GGATCCTCCAACTTTGGAAA+AGG | - | chr8.4:80798882-80798901 | MS.gene62781:intron | 45.0% |
! | TTCTGGTTGCTCTTCAGAGA+TGG | - | chr8.4:80797755-80797774 | MS.gene62781:intron | 45.0% |
!! | CCCGTGAAGCATTTTTGTAG+GGG | - | chr8.4:80798980-80798999 | MS.gene62781:CDS | 45.0% |
!! | GAAGAGGGGTAGCTATTTTG+AGG | + | chr8.4:80797532-80797551 | None:intergenic | 45.0% |
!! | GGCTGGTTTCCATACAAACA+TGG | - | chr8.4:80798001-80798020 | MS.gene62781:intron | 45.0% |
!! | GTTGTATGCAGGAGAGTACT+TGG | - | chr8.4:80796177-80796196 | MS.gene62781:intron | 45.0% |
!! | TATGGCTTTGCTTTGGGTTG+TGG | + | chr8.4:80797800-80797819 | None:intergenic | 45.0% |
AATGGCATTACCATGGGTGG+TGG | - | chr8.4:80794018-80794037 | MS.gene62781:intron | 50.0% | |
ACCTCCCAATCCAAACAGAG+GGG | + | chr8.4:80794892-80794911 | None:intergenic | 50.0% | |
AGAAAGACGGTAACTGAGGG+TGG | + | chr8.4:80797621-80797640 | None:intergenic | 50.0% | |
ATGGCATTACCATGGGTGGT+GGG | - | chr8.4:80794019-80794038 | MS.gene62781:intron | 50.0% | |
CAGGTGAAACCAAGGATGCA+TGG | - | chr8.4:80798291-80798310 | MS.gene62781:intron | 50.0% | |
CAGTTTCCCTGATTGCCTAG+TGG | - | chr8.4:80797411-80797430 | MS.gene62781:intron | 50.0% | |
CTCAATGGCATTACCATGGG+TGG | - | chr8.4:80794015-80794034 | MS.gene62781:intron | 50.0% | |
CTCCAGGTAGCTCTTCTCAA+TGG | - | chr8.4:80794000-80794019 | MS.gene62781:intron | 50.0% | |
CTGACTGGGGAAAAGCTCAA+CGG | - | chr8.4:80796202-80796221 | MS.gene62781:intron | 50.0% | |
GAACCTCCCAATCCAAACAG+AGG | + | chr8.4:80794894-80794913 | None:intergenic | 50.0% | |
GATATCTGGGGACTTCTGTG+AGG | - | chr8.4:80798574-80798593 | MS.gene62781:intron | 50.0% | |
GCATGCTCTCCAAGTGATGT+GGG | - | chr8.4:80797039-80797058 | MS.gene62781:intron | 50.0% | |
GCATTTCACGCCACAATGCA+AGG | + | chr8.4:80794203-80794222 | None:intergenic | 50.0% | |
GCCGCAGTAGTGTACTACAA+AGG | - | chr8.4:80796475-80796494 | MS.gene62781:intron | 50.0% | |
GGAGAATCGTGCACTTGTAG+AGG | + | chr8.4:80797653-80797672 | None:intergenic | 50.0% | |
GGAGTAGAGATGGTTGCATG+TGG | - | chr8.4:80796223-80796242 | MS.gene62781:intron | 50.0% | |
GGGCAGGAATTTCAATCCCT+GGG | - | chr8.4:80794040-80794059 | MS.gene62781:intron | 50.0% | |
GTGGGATGATGTGTATGGGT+TGG | - | chr8.4:80797327-80797346 | MS.gene62781:intron | 50.0% | |
TCACGTCTACCTGGTCACAT+AGG | - | chr8.4:80794800-80794819 | MS.gene62781:intron | 50.0% | |
TGCATCCTTGGTTTCACCTG+CGG | + | chr8.4:80798291-80798310 | None:intergenic | 50.0% | |
TGCATGCTCTCCAAGTGATG+TGG | - | chr8.4:80797038-80797057 | MS.gene62781:intron | 50.0% | |
TGCCATTGAGAAGAGCTACC+TGG | + | chr8.4:80794005-80794024 | None:intergenic | 50.0% | |
TGTGACCAGGTAGACGTGAA+AGG | + | chr8.4:80794799-80794818 | None:intergenic | 50.0% | |
TGTTAGTGGCCCTTGCATTG+TGG | - | chr8.4:80794190-80794209 | MS.gene62781:intron | 50.0% | |
TTCCAATAGGAAGTTGCCGC+AGG | - | chr8.4:80798272-80798291 | MS.gene62781:intron | 50.0% | |
TTGCAAGTCGGAATGTCCCA+GGG | + | chr8.4:80794059-80794078 | None:intergenic | 50.0% | |
! | GGGGCACTTATACTTCCACT+AGG | + | chr8.4:80797429-80797448 | None:intergenic | 50.0% |
!! | ACGTGTAGTGGACAAGGACA+TGG | - | chr8.4:80798689-80798708 | MS.gene62781:intron | 50.0% |
!! | AGAGTACTTGGCTCTGACTG+GGG | - | chr8.4:80796189-80796208 | MS.gene62781:intron | 50.0% |
!! | GAGAGTACTTGGCTCTGACT+GGG | - | chr8.4:80796188-80796207 | MS.gene62781:intron | 50.0% |
!! | GAGGGGTAGCTATTTTGAGG+AGG | + | chr8.4:80797529-80797548 | None:intergenic | 50.0% |
!! | GCGCAACAAGCACTGATCAA+GGG | + | chr8.4:80798519-80798538 | None:intergenic | 50.0% |
ACGTGCCCTCACTCCCTATA+AGG | + | chr8.4:80798673-80798692 | None:intergenic | 55.0% | |
AGGCTATCGATGGCGATCAG+CGG | - | chr8.4:80795212-80795231 | MS.gene62781:intron | 55.0% | |
AGTTGCCGCAGGTGAAACCA+AGG | - | chr8.4:80798283-80798302 | MS.gene62781:intron | 55.0% | |
CACCTGCGGCAACTTCCTAT+TGG | + | chr8.4:80798277-80798296 | None:intergenic | 55.0% | |
GCAGTGGGATCCTCCAACTT+TGG | - | chr8.4:80798876-80798895 | MS.gene62781:intron | 55.0% | |
GGGGCAGGAATTTCAATCCC+TGG | - | chr8.4:80794039-80794058 | MS.gene62781:intron | 55.0% | |
GTAGTACACTACTGCGGCCT+GGG | + | chr8.4:80796473-80796492 | None:intergenic | 55.0% | |
GTTGCAAGTCGGAATGTCCC+AGG | + | chr8.4:80794060-80794079 | None:intergenic | 55.0% | |
TGGCATTACCATGGGTGGTG+GGG | - | chr8.4:80794020-80794039 | MS.gene62781:intron | 55.0% | |
TGTAGTACACTACTGCGGCC+TGG | + | chr8.4:80796474-80796493 | None:intergenic | 55.0% | |
TTGAGAGGATCGGGATGGTG+TGG | - | chr8.4:80798103-80798122 | MS.gene62781:intron | 55.0% | |
! | ACCCCTCTGTTTGGATTGGG+AGG | - | chr8.4:80794888-80794907 | MS.gene62781:intron | 55.0% |
! | AGTGCTTGTTGCGCGAGTAC+CGG | - | chr8.4:80798525-80798544 | MS.gene62781:intron | 55.0% |
! | TAAACGGAAGCACGCCCTTC+AGG | + | chr8.4:80797155-80797174 | None:intergenic | 55.0% |
!! | CGCGCAACAAGCACTGATCA+AGG | + | chr8.4:80798520-80798539 | None:intergenic | 55.0% |
!! | GGAGAGTACTTGGCTCTGAC+TGG | - | chr8.4:80796187-80796206 | MS.gene62781:intron | 55.0% |
AATTCCTGCCCCACCACCCA+TGG | + | chr8.4:80794031-80794050 | None:intergenic | 60.0% | |
ACCCAGGTAGAAGGGCCTGA+AGG | - | chr8.4:80797137-80797156 | MS.gene62781:intron | 60.0% | |
CCCAGGTAGAAGGGCCTGAA+GGG | - | chr8.4:80797138-80797157 | MS.gene62781:intron | 60.0% | |
CCCTTCAGGCCCTTCTACCT+GGG | + | chr8.4:80797141-80797160 | None:intergenic | 60.0% | |
GGACAAGGACATGGCCCCAA+AGG | - | chr8.4:80798698-80798717 | MS.gene62781:intron | 60.0% | |
!! | ATTACCATGGGTGGTGGGGC+AGG | - | chr8.4:80794024-80794043 | MS.gene62781:intron | 60.0% |
!! | GAGGGCACGTGTAGTGGACA+AGG | - | chr8.4:80798683-80798702 | MS.gene62781:intron | 60.0% |
GCCCTTCAGGCCCTTCTACC+TGG | + | chr8.4:80797142-80797161 | None:intergenic | 65.0% | |
! | GGGAGTGAGGGCACGTGTAG+TGG | - | chr8.4:80798677-80798696 | MS.gene62781:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 80793827 | 80798999 | 80793827 | ID=MS.gene62781 |
chr8.4 | mRNA | 80793827 | 80798999 | 80793827 | ID=MS.gene62781.t1;Parent=MS.gene62781 |
chr8.4 | exon | 80798925 | 80798999 | 80798925 | ID=MS.gene62781.t1.exon1;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80798925 | 80798999 | 80798925 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80798737 | 80798820 | 80798737 | ID=MS.gene62781.t1.exon2;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80798737 | 80798820 | 80798737 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80798005 | 80798089 | 80798005 | ID=MS.gene62781.t1.exon3;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80798005 | 80798089 | 80798005 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80796553 | 80796638 | 80796553 | ID=MS.gene62781.t1.exon4;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80796553 | 80796638 | 80796553 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80796330 | 80796451 | 80796330 | ID=MS.gene62781.t1.exon5;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80796330 | 80796451 | 80796330 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80795982 | 80796042 | 80795982 | ID=MS.gene62781.t1.exon6;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80795982 | 80796042 | 80795982 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80794447 | 80794545 | 80794447 | ID=MS.gene62781.t1.exon7;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80794447 | 80794545 | 80794447 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80794231 | 80794332 | 80794231 | ID=MS.gene62781.t1.exon8;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80794231 | 80794332 | 80794231 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80794107 | 80794148 | 80794107 | ID=MS.gene62781.t1.exon9;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80794107 | 80794148 | 80794107 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
chr8.4 | exon | 80793827 | 80793946 | 80793827 | ID=MS.gene62781.t1.exon10;Parent=MS.gene62781.t1 |
chr8.4 | CDS | 80793827 | 80793946 | 80793827 | ID=cds.MS.gene62781.t1;Parent=MS.gene62781.t1 |
Gene Sequence |
Protein sequence |