Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64396.t1 | XP_024632264.1 | 97.9 | 374 | 8 | 0 | 1 | 374 | 1 | 374 | 5.20E-216 | 760 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64396.t1 | Q9MAT5 | 70.3 | 374 | 111 | 0 | 1 | 374 | 10 | 383 | 3.1e-161 | 569.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64396.t1 | A0A072V8M2 | 97.9 | 374 | 8 | 0 | 1 | 374 | 1 | 374 | 3.8e-216 | 760.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene64396 | 0.852113 | 5.71E-61 | -1.69E-46 |
| MS.gene051850 | MS.gene64396 | 0.861023 | 1.37E-63 | -1.69E-46 |
| MS.gene051885 | MS.gene64396 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene64396 | 0.804257 | 2.36E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene64396 | 0.810456 | 1.14E-50 | -1.69E-46 |
| MS.gene055424 | MS.gene64396 | 0.808885 | 2.49E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene64396 | 0.851698 | 7.49E-61 | -1.69E-46 |
| MS.gene058364 | MS.gene64396 | 0.819716 | 1.00E-52 | -1.69E-46 |
| MS.gene06001 | MS.gene64396 | 0.801456 | 8.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64396 | MS.gene026173 | PPI |
| MS.gene030293 | MS.gene64396 | PPI |
| MS.gene68888 | MS.gene64396 | PPI |
| MS.gene064036 | MS.gene64396 | PPI |
| MS.gene66341 | MS.gene64396 | PPI |
| MS.gene91127 | MS.gene64396 | PPI |
| MS.gene29219 | MS.gene64396 | PPI |
| MS.gene75060 | MS.gene64396 | PPI |
| MS.gene75062 | MS.gene64396 | PPI |
| MS.gene88611 | MS.gene64396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64396.t1 | MTR_2g054880 | 97.861 | 374 | 8 | 0 | 1 | 374 | 1 | 374 | 0.0 | 774 |
| MS.gene64396.t1 | MTR_1g113940 | 38.870 | 301 | 159 | 10 | 18 | 307 | 3 | 289 | 1.15e-55 | 186 |
| MS.gene64396.t1 | MTR_4g119900 | 37.224 | 317 | 162 | 8 | 26 | 333 | 142 | 430 | 2.09e-53 | 185 |
| MS.gene64396.t1 | MTR_4g119900 | 37.224 | 317 | 162 | 8 | 26 | 333 | 142 | 430 | 2.27e-53 | 184 |
| MS.gene64396.t1 | MTR_2g436780 | 37.217 | 309 | 173 | 8 | 26 | 333 | 144 | 432 | 1.52e-52 | 182 |
| MS.gene64396.t1 | MTR_2g436780 | 37.217 | 309 | 173 | 8 | 26 | 333 | 144 | 432 | 1.91e-52 | 182 |
| MS.gene64396.t1 | MTR_6g091770 | 33.046 | 348 | 200 | 10 | 26 | 372 | 65 | 380 | 4.27e-51 | 175 |
| MS.gene64396.t1 | MTR_3g013960 | 33.136 | 338 | 168 | 13 | 25 | 331 | 255 | 565 | 1.05e-39 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64396.t1 | AT1G04870 | 72.346 | 358 | 99 | 0 | 17 | 374 | 26 | 383 | 0.0 | 575 |
| MS.gene64396.t1 | AT1G04870 | 67.857 | 280 | 90 | 0 | 95 | 374 | 1 | 280 | 6.69e-152 | 429 |
| MS.gene64396.t1 | AT3G20020 | 35.655 | 359 | 177 | 7 | 26 | 352 | 83 | 419 | 3.76e-62 | 206 |
| MS.gene64396.t1 | AT3G20020 | 35.655 | 359 | 177 | 7 | 26 | 352 | 83 | 419 | 4.91e-62 | 206 |
| MS.gene64396.t1 | AT4G29510 | 33.923 | 339 | 194 | 8 | 26 | 363 | 72 | 381 | 2.00e-53 | 181 |
| MS.gene64396.t1 | AT3G06930 | 35.905 | 337 | 190 | 12 | 2 | 333 | 121 | 436 | 3.08e-53 | 184 |
| MS.gene64396.t1 | AT3G06930 | 35.905 | 337 | 190 | 12 | 2 | 333 | 121 | 436 | 3.35e-53 | 184 |
| MS.gene64396.t1 | AT2G19670 | 33.434 | 332 | 183 | 9 | 26 | 352 | 48 | 346 | 2.35e-52 | 178 |
| MS.gene64396.t1 | AT3G20020 | 33.148 | 359 | 164 | 8 | 26 | 352 | 83 | 397 | 2.94e-52 | 179 |
| MS.gene64396.t1 | AT5G49020 | 36.893 | 309 | 174 | 10 | 26 | 333 | 151 | 439 | 2.64e-51 | 179 |
| MS.gene64396.t1 | AT5G49020 | 36.893 | 309 | 174 | 10 | 26 | 333 | 149 | 437 | 2.69e-51 | 179 |
| MS.gene64396.t1 | AT3G12270 | 34.234 | 333 | 166 | 11 | 25 | 335 | 244 | 545 | 1.43e-41 | 154 |
Find 91 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTTGTGTAGGTTGTTT+TGG | 0.274614 | 2.4:+35348614 | MS.gene64396:intron |
| GGTGGTTTGATGTACATTTC+CGG | 0.276872 | 2.4:+35352595 | MS.gene64396:CDS |
| ATTAGCGTAGTCGACTTCTT+TGG | 0.288507 | 2.4:-35348412 | None:intergenic |
| TTCTACTATCCCAGTCCTAA+TGG | 0.297541 | 2.4:-35350488 | None:intergenic |
| TTAGCGTAGTCGACTTCTTT+GGG | 0.302924 | 2.4:-35348411 | None:intergenic |
| GATGAAACAAAAGCCTTCTA+TGG | 0.355790 | 2.4:+35350562 | MS.gene64396:CDS |
| AACACAAAACTGTGTGGATA+TGG | 0.358771 | 2.4:+35352570 | MS.gene64396:CDS |
| GAAGGGAAACCATCGTTTAA+TGG | 0.372426 | 2.4:+35353195 | MS.gene64396:CDS |
| GTGGTTTGATGTACATTTCC+GGG | 0.373727 | 2.4:+35352596 | MS.gene64396:CDS |
| AACGCCGCCGCTGGTGGCCG+AGG | 0.392661 | 2.4:+35348378 | MS.gene64396:CDS |
| TTGGATGTTGGTGCTGGAAG+TGG | 0.397747 | 2.4:+35348633 | MS.gene64396:CDS |
| CTGTGAGATTCAAAAGCATT+CGG | 0.404202 | 2.4:+35353231 | MS.gene64396:CDS |
| GCTCATATCAACACCATAGA+AGG | 0.404592 | 2.4:-35350575 | None:intergenic |
| TCATTACAAAATTAACAGTT+AGG | 0.435699 | 2.4:-35353165 | None:intergenic |
| CAGGTTGTTGAGGTTATTGA+GGG | 0.437694 | 2.4:+35348765 | MS.gene64396:CDS |
| ACCAGTCAGCTATGGGTGAT+TGG | 0.438081 | 2.4:+35350527 | MS.gene64396:CDS |
| CGTTTAATGGAGGTTGAGCT+TGG | 0.443414 | 2.4:+35353208 | MS.gene64396:CDS |
| CTTCATCCACATCAAGTCAT+AGG | 0.443890 | 2.4:+35352450 | MS.gene64396:CDS |
| TCTACTATCCCAGTCCTAAT+GGG | 0.449075 | 2.4:-35350487 | None:intergenic |
| TGGATGTTGGTGCTGGAAGT+GGG | 0.452123 | 2.4:+35348634 | MS.gene64396:CDS |
| GAAGTGGGATTCTTGCTATA+TGG | 0.455599 | 2.4:+35348649 | MS.gene64396:CDS |
| GCATGTGGATGGCACCCATT+AGG | 0.455721 | 2.4:+35350473 | MS.gene64396:CDS |
| GCAGGTTGTTGAGGTTATTG+AGG | 0.459237 | 2.4:+35348764 | MS.gene64396:CDS |
| GACCGCTGGCTCAAACCAAC+AGG | 0.460638 | 2.4:+35349569 | MS.gene64396:CDS |
| GATGTTACATTGCCTGAGAA+AGG | 0.461263 | 2.4:+35348798 | MS.gene64396:CDS |
| AACTCAATCTCATGTTCAGC+TGG | 0.461498 | 2.4:-35352712 | None:intergenic |
| TTCCTCTGCTCCTCAGCAAA+AGG | 0.461816 | 2.4:-35350610 | None:intergenic |
| TCATATGTGCTCGTGACCGC+TGG | 0.468854 | 2.4:+35349555 | MS.gene64396:CDS |
| TGTGAGATTCAAAAGCATTC+GGG | 0.473426 | 2.4:+35353232 | MS.gene64396:CDS |
| CTTTGGGGACGGCGGTGCCT+CGG | 0.475277 | 2.4:-35348395 | None:intergenic |
| GGGCGATTACCAGTCAGCTA+TGG | 0.477604 | 2.4:+35350519 | MS.gene64396:CDS |
| CAAACAAACAAACCTTTCTC+AGG | 0.478341 | 2.4:-35348810 | None:intergenic |
| AGCTCAAGCAGGTGCAAAGA+AGG | 0.480270 | 2.4:+35348674 | MS.gene64396:CDS |
| CTGTACACACTGGGGTCAGC+AGG | 0.481201 | 2.4:+35352759 | MS.gene64396:CDS |
| TGGGATAGTAGAACAAAAGT+TGG | 0.503612 | 2.4:+35350498 | MS.gene64396:CDS |
| CATCAAGTCATAGGAACTGC+TGG | 0.510644 | 2.4:+35352459 | MS.gene64396:CDS |
| TCTTCCGAAAACGCCGCCGC+TGG | 0.511121 | 2.4:+35348369 | MS.gene64396:CDS |
| CTCCTGTTGGTTTGAGCCAG+CGG | 0.511819 | 2.4:-35349571 | None:intergenic |
| GGTGCCTCGGCCACCAGCGG+CGG | 0.514143 | 2.4:-35348382 | None:intergenic |
| TCCGAAAACGCCGCCGCTGG+TGG | 0.516593 | 2.4:+35348372 | MS.gene64396:CDS |
| GGTTATTGAGGGTTCTGTTG+AGG | 0.518633 | 2.4:+35348776 | MS.gene64396:CDS |
| AATACTTACATCACTCCTGT+TGG | 0.521476 | 2.4:-35349584 | None:intergenic |
| GCAGAGGAAATACTATCTAC+AGG | 0.521867 | 2.4:+35350624 | MS.gene64396:CDS |
| TGGATGGCACCCATTAGGAC+TGG | 0.527259 | 2.4:+35350478 | MS.gene64396:CDS |
| TGTTATCATCTCTGAATGGA+TGG | 0.530239 | 2.4:+35349496 | MS.gene64396:CDS |
| TACTAACCTTGTCTTTAAAG+TGG | 0.532555 | 2.4:-35348533 | None:intergenic |
| GCTCTCAGATCGTGTTCGTA+TGG | 0.535538 | 2.4:+35348476 | MS.gene64396:CDS |
| GCCAATCACCCATAGCTGAC+TGG | 0.536396 | 2.4:-35350528 | None:intergenic |
| GGCGATTACCAGTCAGCTAT+GGG | 0.537653 | 2.4:+35350520 | MS.gene64396:CDS |
| GGCGGTGCCTCGGCCACCAG+CGG | 0.543715 | 2.4:-35348385 | None:intergenic |
| TAATCTTGAGCAGGTTGTTG+AGG | 0.544159 | 2.4:+35348755 | MS.gene64396:CDS |
| AGGAACTGCTGGTCTAGTAA+AGG | 0.544394 | 2.4:+35352470 | MS.gene64396:CDS |
| GAAATCGAATAATCTTGAGC+AGG | 0.548053 | 2.4:+35348746 | MS.gene64396:CDS |
| GCTATATGGTCAGCTCAAGC+AGG | 0.548853 | 2.4:+35348663 | MS.gene64396:CDS |
| TTTGTAATGAGTCGCTCGAA+GGG | 0.553039 | 2.4:+35353178 | MS.gene64396:CDS |
| GGGATAGTAGAACAAAAGTT+GGG | 0.555999 | 2.4:+35350499 | MS.gene64396:CDS |
| CCATCACTCACATGTGTAGG+AGG | 0.557201 | 2.4:-35353136 | None:intergenic |
| TAGTCATGCTCGCATGTGGA+TGG | 0.569852 | 2.4:+35350462 | MS.gene64396:CDS |
| TTGGTGATAGAGAAAGGAGT+AGG | 0.571481 | 2.4:-35348445 | None:intergenic |
| ATCCACATGCGAGCATGACT+AGG | 0.578485 | 2.4:-35350460 | None:intergenic |
| GGATGGCACCCATTAGGACT+GGG | 0.582000 | 2.4:+35350479 | MS.gene64396:CDS |
| TAGCGTAGTCGACTTCTTTG+GGG | 0.583467 | 2.4:-35348410 | None:intergenic |
| ATCCTAGTCATGCTCGCATG+TGG | 0.586013 | 2.4:+35350458 | MS.gene64396:CDS |
| TGCCACAGTGGCAGACATTG+AGG | 0.587110 | 2.4:+35352509 | MS.gene64396:CDS |
| TGCTTACCAGGGACGAAGTG+AGG | 0.588452 | 2.4:+35352687 | MS.gene64396:intron |
| TGTAGATTACTGTACACACT+GGG | 0.591513 | 2.4:+35352750 | MS.gene64396:CDS |
| AATTTCTGTAGACATCGTTG+TGG | 0.599319 | 2.4:+35352421 | MS.gene64396:intron |
| CAAACACCACTTTAAAGACA+AGG | 0.601109 | 2.4:+35348527 | MS.gene64396:CDS |
| TTGATGTTATCATCTCTGAA+TGG | 0.604535 | 2.4:+35349492 | MS.gene64396:CDS |
| GTGTAGATTACTGTACACAC+TGG | 0.606301 | 2.4:+35352749 | MS.gene64396:CDS |
| GTAGTCGACTTCTTTGGGGA+CGG | 0.618495 | 2.4:-35348406 | None:intergenic |
| TGTTGAAGCTACTAAGATGT+CGG | 0.627273 | 2.4:+35348704 | MS.gene64396:CDS |
| CATGTGTAGGAGGATTTAAG+AGG | 0.628125 | 2.4:-35353126 | None:intergenic |
| TCACCATCACTCACATGTGT+AGG | 0.628712 | 2.4:-35353139 | None:intergenic |
| ACAAAACTGTGTGGATATGG+AGG | 0.629006 | 2.4:+35352573 | MS.gene64396:CDS |
| GGGAAACCATCGTTTAATGG+AGG | 0.633476 | 2.4:+35353198 | MS.gene64396:CDS |
| GTCGACTTCTTTGGGGACGG+CGG | 0.634616 | 2.4:-35348403 | None:intergenic |
| TTCCTCAATGTCTGCCACTG+TGG | 0.642512 | 2.4:-35352511 | None:intergenic |
| TGTGTACAGTAATCTACACT+AGG | 0.645957 | 2.4:-35352745 | None:intergenic |
| GCAGTTCCTATGACTTGATG+TGG | 0.646015 | 2.4:-35352456 | None:intergenic |
| GTAATCTACACTAGGAGCGG+TGG | 0.661333 | 2.4:-35352737 | None:intergenic |
| TGGTGTTGATATGAGCACTT+TGG | 0.661843 | 2.4:+35350582 | MS.gene64396:CDS |
| GTTATCATCTCTGAATGGAT+GGG | 0.664829 | 2.4:+35349497 | MS.gene64396:CDS |
| GCTCAACCTCCATTAAACGA+TGG | 0.680084 | 2.4:-35353204 | None:intergenic |
| CCTCCTACACATGTGAGTGA+TGG | 0.685198 | 2.4:+35353136 | MS.gene64396:CDS |
| ACAGTAATCTACACTAGGAG+CGG | 0.702438 | 2.4:-35352740 | None:intergenic |
| ACGGAGAACACAAAACTGTG+TGG | 0.710656 | 2.4:+35352564 | MS.gene64396:CDS |
| AACTGTGTGGATATGGAGGG+TGG | 0.718749 | 2.4:+35352577 | MS.gene64396:CDS |
| CAAAACTGTGTGGATATGGA+GGG | 0.725863 | 2.4:+35352574 | MS.gene64396:CDS |
| TGACTGTTTGACTGCCACAG+TGG | 0.774647 | 2.4:+35352497 | MS.gene64396:CDS |
| GTAGATTACTGTACACACTG+GGG | 0.847696 | 2.4:+35352751 | MS.gene64396:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATGAATATTTCATAA+AGG | + | chr2.4:35348968-35348987 | MS.gene64396:intron | 10.0% |
| !!! | AGTTTTATCATTAAATAAAA+AGG | - | chr2.4:35351282-35351301 | None:intergenic | 10.0% |
| !!! | TAAGAAAATATTATTTTTTC+GGG | + | chr2.4:35349141-35349160 | MS.gene64396:intron | 10.0% |
| !! | AACATTTAACAATTCATATA+AGG | - | chr2.4:35349409-35349428 | None:intergenic | 15.0% |
| !! | TAACCTAAATTAATTGTTAT+TGG | + | chr2.4:35351857-35351876 | MS.gene64396:intron | 15.0% |
| !! | TATACTATATATGAAAAATG+TGG | + | chr2.4:35349783-35349802 | MS.gene64396:intron | 15.0% |
| !! | TTATATGAATTGTTAAATGT+TGG | + | chr2.4:35349408-35349427 | MS.gene64396:intron | 15.0% |
| !! | TTATTAAGTGGTTAATTATA+GGG | + | chr2.4:35349054-35349073 | MS.gene64396:intron | 15.0% |
| !!! | ATATAGTACTTATTTTTGAA+AGG | - | chr2.4:35353271-35353290 | None:intergenic | 15.0% |
| !! | AGCAATTTGAATATTAATGA+AGG | + | chr2.4:35352849-35352868 | MS.gene64396:intron | 20.0% |
| !! | ATAAATCTAATTGTAGACAT+AGG | - | chr2.4:35352324-35352343 | None:intergenic | 20.0% |
| !! | ATGTTAGTGTAATTAATCAT+TGG | + | chr2.4:35353094-35353113 | MS.gene64396:intron | 20.0% |
| !! | ATTACCTATTTGAAAGTTTA+GGG | + | chr2.4:35349306-35349325 | MS.gene64396:intron | 20.0% |
| !! | GTTATTAAGTGGTTAATTAT+AGG | + | chr2.4:35349053-35349072 | MS.gene64396:intron | 20.0% |
| !! | TAAATCTAATTGTAGACATA+GGG | - | chr2.4:35352323-35352342 | None:intergenic | 20.0% |
| !! | TAATGATAAGAAATTTGTGT+AGG | + | chr2.4:35348605-35348624 | MS.gene64396:intron | 20.0% |
| !! | TCATTACAAAATTAACAGTT+AGG | - | chr2.4:35353168-35353187 | None:intergenic | 20.0% |
| !! | TGTCCAATAACAATTAATTT+AGG | - | chr2.4:35351863-35351882 | None:intergenic | 20.0% |
| !! | TTAACCACAAATTATCAATT+TGG | - | chr2.4:35349081-35349100 | None:intergenic | 20.0% |
| !! | TTATTCAATGAATCTGAAAA+AGG | + | chr2.4:35349210-35349229 | MS.gene64396:intron | 20.0% |
| !! | TTCATTAATGATACTTCAAT+GGG | + | chr2.4:35352247-35352266 | MS.gene64396:intron | 20.0% |
| !! | TTTGTTAATGAACAAAACTT+TGG | + | chr2.4:35350383-35350402 | MS.gene64396:intron | 20.0% |
| !!! | ATTTTTACATTGACTTAACA+TGG | + | chr2.4:35350233-35350252 | MS.gene64396:intron | 20.0% |
| !!! | CAGTTTTACTATTCTAAAAA+AGG | - | chr2.4:35351335-35351354 | None:intergenic | 20.0% |
| !!! | GAAAGGATTTTTTTAACATT+AGG | - | chr2.4:35350145-35350164 | None:intergenic | 20.0% |
| !!! | GTTACATAGAATTTTTGTTA+TGG | + | chr2.4:35350691-35350710 | MS.gene64396:intron | 20.0% |
| !!! | TATTTTCTTATAATAGTGAC+CGG | - | chr2.4:35349131-35349150 | None:intergenic | 20.0% |
| ! | AAATCCACTTACATATTGAA+AGG | - | chr2.4:35351398-35351417 | None:intergenic | 25.0% |
| ! | AAGGAATATTTGCTTATACT+AGG | + | chr2.4:35349229-35349248 | MS.gene64396:intron | 25.0% |
| ! | AAGTCAATGTAAAAATAGCA+TGG | - | chr2.4:35350229-35350248 | None:intergenic | 25.0% |
| ! | ACAAATACAACACTAAATGA+AGG | - | chr2.4:35351914-35351933 | None:intergenic | 25.0% |
| ! | ACATTGTCAGAATTGAAAAA+GGG | - | chr2.4:35353020-35353039 | None:intergenic | 25.0% |
| ! | ACTCTATTAAATAGTCAAGA+TGG | - | chr2.4:35349257-35349276 | None:intergenic | 25.0% |
| ! | AGAATAGAACAGCTAATTTA+TGG | - | chr2.4:35352905-35352924 | None:intergenic | 25.0% |
| ! | AGGAATATTTGCTTATACTA+GGG | + | chr2.4:35349230-35349249 | MS.gene64396:intron | 25.0% |
| ! | ATGGTATTTGACGAAATAAA+TGG | - | chr2.4:35348920-35348939 | None:intergenic | 25.0% |
| ! | CATTGAATAACTTATGTATC+TGG | + | chr2.4:35349166-35349185 | MS.gene64396:intron | 25.0% |
| ! | CATTGAATAATTGATGTATC+TGG | - | chr2.4:35349200-35349219 | None:intergenic | 25.0% |
| ! | CTTCATTAATGATACTTCAA+TGG | + | chr2.4:35352246-35352265 | MS.gene64396:intron | 25.0% |
| ! | GATTACCTATTTGAAAGTTT+AGG | + | chr2.4:35349305-35349324 | MS.gene64396:intron | 25.0% |
| ! | GGATTATCATGTAAAAATAG+AGG | - | chr2.4:35350183-35350202 | None:intergenic | 25.0% |
| ! | GTTATTGGACAACTAAAAAT+GGG | + | chr2.4:35351872-35351891 | MS.gene64396:intron | 25.0% |
| ! | TAAACCCTAAACTTTCAAAT+AGG | - | chr2.4:35349313-35349332 | None:intergenic | 25.0% |
| ! | TAATTTATGGAACTCATTGA+AGG | - | chr2.4:35352892-35352911 | None:intergenic | 25.0% |
| ! | TACATTGTCAGAATTGAAAA+AGG | - | chr2.4:35353021-35353040 | None:intergenic | 25.0% |
| ! | TGTTATTGGACAACTAAAAA+TGG | + | chr2.4:35351871-35351890 | MS.gene64396:intron | 25.0% |
| ! | TGTTGTTAATTGCAGAAATA+CGG | - | chr2.4:35350062-35350081 | None:intergenic | 25.0% |
| ! | TTAGTATCCTTAACTTAACT+GGG | + | chr2.4:35348550-35348569 | MS.gene64396:intron | 25.0% |
| ! | TTATTGGACAACTAAAAATG+GGG | + | chr2.4:35351873-35351892 | MS.gene64396:intron | 25.0% |
| ! | TTGACTATTTAATAGAGTCA+GGG | + | chr2.4:35349259-35349278 | MS.gene64396:intron | 25.0% |
| !! | CATTGAAGTATCATTAATGA+AGG | - | chr2.4:35352248-35352267 | None:intergenic | 25.0% |
| !! | TATTTGAAAGTTTAGGGTTT+AGG | + | chr2.4:35349312-35349331 | MS.gene64396:intron | 25.0% |
| !!! | AATGATTTGGTAAACTATGA+AGG | + | chr2.4:35350316-35350335 | MS.gene64396:intron | 25.0% |
| !!! | ATAATTTACTTTTTCTCGTC+AGG | - | chr2.4:35351832-35351851 | None:intergenic | 25.0% |
| !!! | CTTTAGTTTTCAACAGAATA+GGG | + | chr2.4:35349899-35349918 | MS.gene64396:intron | 25.0% |
| !!! | TAAGGTTTTGAATTAAATCG+CGG | + | chr2.4:35348865-35348884 | MS.gene64396:intron | 25.0% |
| !!! | TAATTTACTTTTTCTCGTCA+GGG | - | chr2.4:35351831-35351850 | None:intergenic | 25.0% |
| !!! | TCTTTAGTTTTCAACAGAAT+AGG | + | chr2.4:35349898-35349917 | MS.gene64396:intron | 25.0% |
| AAAAAAACCTCTTTCGTTTC+TGG | - | chr2.4:35349619-35349638 | None:intergenic | 30.0% | |
| AAAAAACCTCTTTCGTTTCT+GGG | - | chr2.4:35349618-35349637 | None:intergenic | 30.0% | |
| AAACCAAAATGAATTCCATG+TGG | - | chr2.4:35350802-35350821 | None:intergenic | 30.0% | |
| AACCAAAATGAATTCCATGT+GGG | - | chr2.4:35350801-35350820 | None:intergenic | 30.0% | |
| AACTTAATTGATACTTCCTC+CGG | + | chr2.4:35349109-35349128 | MS.gene64396:intron | 30.0% | |
| AATATTAATGAAGGAGCTGA+TGG | + | chr2.4:35352858-35352877 | MS.gene64396:intron | 30.0% | |
| ACAATGAAAAGGCTATAAGA+CGG | - | chr2.4:35350978-35350997 | None:intergenic | 30.0% | |
| ACCTTTATAGATGAAAGACA+GGG | + | chr2.4:35352961-35352980 | MS.gene64396:intron | 30.0% | |
| ACTGACATGTATCAATGATT+TGG | + | chr2.4:35350303-35350322 | MS.gene64396:intron | 30.0% | |
| ACTGTAACACTGTTGTATTA+CGG | + | chr2.4:35350007-35350026 | MS.gene64396:intron | 30.0% | |
| AGTGTAATTAATCATTGGAC+AGG | + | chr2.4:35353099-35353118 | MS.gene64396:intron | 30.0% | |
| ATACAAACACCAACACTTTA+AGG | - | chr2.4:35349463-35349482 | None:intergenic | 30.0% | |
| ATGTTGATGTTCTTGTTCTT+GGG | - | chr2.4:35350874-35350893 | None:intergenic | 30.0% | |
| CACAAAATTGACATGTTCTA+TGG | + | chr2.4:35350757-35350776 | MS.gene64396:intron | 30.0% | |
| CTTGACTATTTAATAGAGTC+AGG | + | chr2.4:35349258-35349277 | MS.gene64396:intron | 30.0% | |
| GGTTAATCAGTATTGTTAAG+TGG | + | chr2.4:35349920-35349939 | MS.gene64396:intron | 30.0% | |
| GTACAAGGTTATATTGTACA+AGG | - | chr2.4:35352943-35352962 | None:intergenic | 30.0% | |
| GTTAATGAACAAAACTTTGG+TGG | + | chr2.4:35350386-35350405 | MS.gene64396:intron | 30.0% | |
| GTTAGTATCCTTAACTTAAC+TGG | + | chr2.4:35348549-35348568 | MS.gene64396:intron | 30.0% | |
| GTTATAGCACTAATGCTTAA+GGG | + | chr2.4:35351126-35351145 | MS.gene64396:intron | 30.0% | |
| TAATCAGTATTGTTAAGTGG+TGG | + | chr2.4:35349923-35349942 | MS.gene64396:intron | 30.0% | |
| TACCTTTATAGATGAAAGAC+AGG | + | chr2.4:35352960-35352979 | MS.gene64396:intron | 30.0% | |
| TAGCATAGCACATTTGATAT+AGG | - | chr2.4:35352024-35352043 | None:intergenic | 30.0% | |
| TATTGGACAACTAAAAATGG+GGG | + | chr2.4:35351874-35351893 | MS.gene64396:intron | 30.0% | |
| TCTGACCAAAAATACAATAG+CGG | - | chr2.4:35351216-35351235 | None:intergenic | 30.0% | |
| TCTGCTTCATGAAAATGAAA+TGG | + | chr2.4:35350341-35350360 | MS.gene64396:intron | 30.0% | |
| TGACTATGATCTCACTTTAA+TGG | + | chr2.4:35352184-35352203 | MS.gene64396:intron | 30.0% | |
| TTGATGTTATCATCTCTGAA+TGG | + | chr2.4:35349492-35349511 | MS.gene64396:CDS | 30.0% | |
| ! | AATTAGGTTTTTCATGCAAG+TGG | - | chr2.4:35350913-35350932 | None:intergenic | 30.0% |
| ! | ACCAGAAAATGGATAGTTTT+AGG | + | chr2.4:35351251-35351270 | MS.gene64396:intron | 30.0% |
| ! | ACTTTAATGGTGTGATTTGT+AGG | + | chr2.4:35352197-35352216 | MS.gene64396:intron | 30.0% |
| ! | CTTTCATCTATAAAGGTACA+AGG | - | chr2.4:35352958-35352977 | None:intergenic | 30.0% |
| ! | GAAATTTGTGTAGGTTGTTT+TGG | + | chr2.4:35348614-35348633 | MS.gene64396:intron | 30.0% |
| ! | GAATGAAGTACTTCTGAATT+AGG | - | chr2.4:35350929-35350948 | None:intergenic | 30.0% |
| ! | GACTAGTTGAAATAAAACTG+AGG | - | chr2.4:35351428-35351447 | None:intergenic | 30.0% |
| ! | GGTTTATGACTTTTATCTAC+AGG | + | chr2.4:35352218-35352237 | MS.gene64396:intron | 30.0% |
| ! | TACTAACCTTGTCTTTAAAG+TGG | - | chr2.4:35348536-35348555 | None:intergenic | 30.0% |
| ! | TCATACTTTCTGTGATAATG+TGG | + | chr2.4:35352994-35353013 | MS.gene64396:intron | 30.0% |
| ! | TTCTTCTAAAGGAGATATGT+CGG | - | chr2.4:35351504-35351523 | None:intergenic | 30.0% |
| !! | ATAGAGGTTTTGTGTTATGA+AGG | - | chr2.4:35350167-35350186 | None:intergenic | 30.0% |
| !! | CCAGAAAATGGATAGTTTTA+GGG | + | chr2.4:35351252-35351271 | MS.gene64396:intron | 30.0% |
| !! | GTTCTAGCTTTAAGTTTGTA+AGG | + | chr2.4:35348847-35348866 | MS.gene64396:intron | 30.0% |
| !! | TTCTTTTTGGTGATAGAGAA+AGG | - | chr2.4:35348454-35348473 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTTGATTGTCGTA+CGG | + | chr2.4:35350812-35350831 | MS.gene64396:intron | 30.0% |
| !!! | TCTAGTTTTTCAAATGAGTG+AGG | - | chr2.4:35349698-35349717 | None:intergenic | 30.0% |
| AACACAAAACTGTGTGGATA+TGG | + | chr2.4:35352570-35352589 | MS.gene64396:CDS | 35.0% | |
| AACCAAAAATCTGAGCAACA+GGG | + | chr2.4:35351554-35351573 | MS.gene64396:intron | 35.0% | |
| AACTAAAAATGGGGGACTAA+GGG | + | chr2.4:35351882-35351901 | MS.gene64396:intron | 35.0% | |
| AATACTTACATCACTCCTGT+TGG | - | chr2.4:35349587-35349606 | None:intergenic | 35.0% | |
| AATTTCTGTAGACATCGTTG+TGG | + | chr2.4:35352421-35352440 | MS.gene64396:intron | 35.0% | |
| ACAAGAACATCAACATGTGT+TGG | + | chr2.4:35350878-35350897 | MS.gene64396:intron | 35.0% | |
| ACACAGTTGAACTAGAATGA+AGG | - | chr2.4:35353070-35353089 | None:intergenic | 35.0% | |
| ACCAAAATGAATTCCATGTG+GGG | - | chr2.4:35350800-35350819 | None:intergenic | 35.0% | |
| ACCCTGTCTTTCATCTATAA+AGG | - | chr2.4:35352965-35352984 | None:intergenic | 35.0% | |
| ACCTAAACCCAGTTAAGTTA+AGG | - | chr2.4:35348560-35348579 | None:intergenic | 35.0% | |
| ATACATGTCAGTATCTCTGT+TGG | - | chr2.4:35350295-35350314 | None:intergenic | 35.0% | |
| ATAGCTATAATGCCCATACA+AGG | - | chr2.4:35352635-35352654 | None:intergenic | 35.0% | |
| CAAACAAACAAACCTTTCTC+AGG | - | chr2.4:35348813-35348832 | None:intergenic | 35.0% | |
| CATGTTGATGTTCTTGTTCT+TGG | - | chr2.4:35350875-35350894 | None:intergenic | 35.0% | |
| CGTTATAGCACTAATGCTTA+AGG | + | chr2.4:35351125-35351144 | MS.gene64396:intron | 35.0% | |
| CTGGCTATGATGCAATTTAT+TGG | + | chr2.4:35352161-35352180 | MS.gene64396:intron | 35.0% | |
| CTGTTTCCATATCAAGATAG+AGG | + | chr2.4:35352065-35352084 | MS.gene64396:intron | 35.0% | |
| GAAATCGAATAATCTTGAGC+AGG | + | chr2.4:35348746-35348765 | MS.gene64396:CDS | 35.0% | |
| GATGAAACAAAAGCCTTCTA+TGG | + | chr2.4:35350562-35350581 | MS.gene64396:CDS | 35.0% | |
| GCAACCTTTCAATATGTAAG+TGG | + | chr2.4:35351391-35351410 | MS.gene64396:intron | 35.0% | |
| GGGATAGTAGAACAAAAGTT+GGG | + | chr2.4:35350499-35350518 | MS.gene64396:CDS | 35.0% | |
| GTAATACAACAGTGTTACAG+TGG | - | chr2.4:35350008-35350027 | None:intergenic | 35.0% | |
| GTAGCAGAAATACCAGAAAA+TGG | + | chr2.4:35351240-35351259 | MS.gene64396:intron | 35.0% | |
| GTGGAACAAGGATAGAAATT+AGG | - | chr2.4:35351176-35351195 | None:intergenic | 35.0% | |
| GTTAATTGCAGAAATACGGA+TGG | - | chr2.4:35350058-35350077 | None:intergenic | 35.0% | |
| GTTATCATCTCTGAATGGAT+GGG | + | chr2.4:35349497-35349516 | MS.gene64396:CDS | 35.0% | |
| TATAAGACGGTTTCTGAACT+TGG | - | chr2.4:35350965-35350984 | None:intergenic | 35.0% | |
| TATCAAGATAGAGGTTGCAA+TGG | + | chr2.4:35352074-35352093 | MS.gene64396:intron | 35.0% | |
| TCCTTAACTTAACTGGGTTT+AGG | + | chr2.4:35348556-35348575 | MS.gene64396:intron | 35.0% | |
| TCTGAACTTGGTTTATGAGT+GGG | - | chr2.4:35350953-35350972 | None:intergenic | 35.0% | |
| TGGGATAGTAGAACAAAAGT+TGG | + | chr2.4:35350498-35350517 | MS.gene64396:CDS | 35.0% | |
| TGTAGATTACTGTACACACT+GGG | + | chr2.4:35352750-35352769 | MS.gene64396:CDS | 35.0% | |
| TGTGTACAGTAATCTACACT+AGG | - | chr2.4:35352748-35352767 | None:intergenic | 35.0% | |
| TGTTATCATCTCTGAATGGA+TGG | + | chr2.4:35349496-35349515 | MS.gene64396:CDS | 35.0% | |
| TGTTGAAGCTACTAAGATGT+CGG | + | chr2.4:35348704-35348723 | MS.gene64396:CDS | 35.0% | |
| TTCACTCTTGCACAATGAAA+AGG | - | chr2.4:35350989-35351008 | None:intergenic | 35.0% | |
| TTCTGAACTTGGTTTATGAG+TGG | - | chr2.4:35350954-35350973 | None:intergenic | 35.0% | |
| TTGCAACCTCTATCTTGATA+TGG | - | chr2.4:35352074-35352093 | None:intergenic | 35.0% | |
| TTGTATGGGCATTATAGCTA+TGG | + | chr2.4:35352634-35352653 | MS.gene64396:intron | 35.0% | |
| TTTCCTGTTTATGCTTACCA+GGG | + | chr2.4:35352676-35352695 | MS.gene64396:intron | 35.0% | |
| TTTCGTCAAATACCATGACT+AGG | + | chr2.4:35348924-35348943 | MS.gene64396:intron | 35.0% | |
| TTTCTTATAATAGTGACCGG+AGG | - | chr2.4:35349128-35349147 | None:intergenic | 35.0% | |
| ! | AACTTAACTGGGTTTAGGTT+TGG | + | chr2.4:35348561-35348580 | MS.gene64396:intron | 35.0% |
| ! | ACTTAACTGGGTTTAGGTTT+GGG | + | chr2.4:35348562-35348581 | MS.gene64396:intron | 35.0% |
| ! | AGCATGGTAATGTGCAAATT+GGG | - | chr2.4:35350213-35350232 | None:intergenic | 35.0% |
| ! | CAAACACCACTTTAAAGACA+AGG | + | chr2.4:35348527-35348546 | MS.gene64396:CDS | 35.0% |
| ! | CACTTTTATACACTACAGCA+TGG | - | chr2.4:35350839-35350858 | None:intergenic | 35.0% |
| ! | CCCTAAAACTATCCATTTTC+TGG | - | chr2.4:35351255-35351274 | None:intergenic | 35.0% |
| ! | CTTTTCTCTGTCAATAACCA+CGG | + | chr2.4:35352545-35352564 | MS.gene64396:CDS | 35.0% |
| ! | GGGACTAGATTGTTATTAAG+TGG | + | chr2.4:35349042-35349061 | MS.gene64396:intron | 35.0% |
| ! | GGGTCCAAATTGATAATTTG+TGG | + | chr2.4:35349074-35349093 | MS.gene64396:intron | 35.0% |
| ! | GTGATTTTTCATAGAGCAGT+TGG | + | chr2.4:35351766-35351785 | MS.gene64396:intron | 35.0% |
| ! | TAGCATGGTAATGTGCAAAT+TGG | - | chr2.4:35350214-35350233 | None:intergenic | 35.0% |
| ! | TTTTCAAATGAGTGAGGAGT+AGG | - | chr2.4:35349692-35349711 | None:intergenic | 35.0% |
| !! | ATTTGATAGTGTCCTAGTCA+TGG | - | chr2.4:35348939-35348958 | None:intergenic | 35.0% |
| !! | CTGTGAGATTCAAAAGCATT+CGG | + | chr2.4:35353231-35353250 | MS.gene64396:CDS | 35.0% |
| !! | GGTTTTGTGTTATGAAGGAA+AGG | - | chr2.4:35350162-35350181 | None:intergenic | 35.0% |
| !! | TGTGAGATTCAAAAGCATTC+GGG | + | chr2.4:35353232-35353251 | MS.gene64396:CDS | 35.0% |
| !! | TTTAGGGTTTAGGACTAGTT+TGG | + | chr2.4:35349322-35349341 | MS.gene64396:intron | 35.0% |
| !!! | AGCTGCTTTTTTTCGGTTTT+TGG | - | chr2.4:35351628-35351647 | None:intergenic | 35.0% |
| !!! | GATCTGAGAGCATTTCTTTT+TGG | - | chr2.4:35348467-35348486 | None:intergenic | 35.0% |
| !!! | GCTATTGTATTTTTGGTCAG+AGG | + | chr2.4:35351215-35351234 | MS.gene64396:intron | 35.0% |
| !!! | TGTTCTCAGCTGCTTTTTTT+CGG | - | chr2.4:35351635-35351654 | None:intergenic | 35.0% |
| AAAAAGCAGCTGAGAACATG+TGG | + | chr2.4:35351637-35351656 | MS.gene64396:intron | 40.0% | |
| AAAAGCAGCTGAGAACATGT+GGG | + | chr2.4:35351638-35351657 | MS.gene64396:intron | 40.0% | |
| AACTCAATCTCATGTTCAGC+TGG | - | chr2.4:35352715-35352734 | None:intergenic | 40.0% | |
| AAGATGCTCTGACCTTGTAT+GGG | + | chr2.4:35352620-35352639 | MS.gene64396:intron | 40.0% | |
| ACAAAACTGTGTGGATATGG+AGG | + | chr2.4:35352573-35352592 | MS.gene64396:CDS | 40.0% | |
| ACAAGCCAGCACATAATGTA+GGG | - | chr2.4:35350732-35350751 | None:intergenic | 40.0% | |
| ACAGTAATCTACACTAGGAG+CGG | - | chr2.4:35352743-35352762 | None:intergenic | 40.0% | |
| ACCAAAAATCTGAGCAACAG+GGG | + | chr2.4:35351555-35351574 | MS.gene64396:intron | 40.0% | |
| AGAACATCAACATGTGTTGG+TGG | + | chr2.4:35350881-35350900 | MS.gene64396:intron | 40.0% | |
| AGCTGTTTACATTGATGTGC+TGG | + | chr2.4:35352142-35352161 | MS.gene64396:intron | 40.0% | |
| AGTCTCCTCTGATGAGATTT+GGG | - | chr2.4:35352290-35352309 | None:intergenic | 40.0% | |
| AGTTTATCCGATAGTCTGTG+AGG | + | chr2.4:35349021-35349040 | MS.gene64396:intron | 40.0% | |
| ATACGGATGGCAGAAAAAAG+CGG | - | chr2.4:35350045-35350064 | None:intergenic | 40.0% | |
| ATGAATTCCATGTGGGGATT+AGG | - | chr2.4:35350794-35350813 | None:intergenic | 40.0% | |
| ATGTGCAAATTGGGGTAGTT+AGG | - | chr2.4:35350204-35350223 | None:intergenic | 40.0% | |
| CAAAACTGTGTGGATATGGA+GGG | + | chr2.4:35352574-35352593 | MS.gene64396:CDS | 40.0% | |
| CAACTAAAAATGGGGGACTA+AGG | + | chr2.4:35351881-35351900 | MS.gene64396:intron | 40.0% | |
| CAATAATGCAGCTGTGTAAG+TGG | + | chr2.4:35351066-35351085 | MS.gene64396:intron | 40.0% | |
| CAGCAAAGTTCATCATTGCA+TGG | - | chr2.4:35351038-35351057 | None:intergenic | 40.0% | |
| CAGGTTGTTGAGGTTATTGA+GGG | + | chr2.4:35348765-35348784 | MS.gene64396:CDS | 40.0% | |
| CATGTGTAGGAGGATTTAAG+AGG | - | chr2.4:35353129-35353148 | None:intergenic | 40.0% | |
| CCAAAAGTAGAGGCAATTCA+CGG | - | chr2.4:35352100-35352119 | None:intergenic | 40.0% | |
| CTATCCTTGTTCCACTGTAA+GGG | + | chr2.4:35351181-35351200 | MS.gene64396:intron | 40.0% | |
| CTGTGATTGCCTTAAAGTGT+TGG | + | chr2.4:35349451-35349470 | MS.gene64396:intron | 40.0% | |
| CTTCATCCACATCAAGTCAT+AGG | + | chr2.4:35352450-35352469 | MS.gene64396:CDS | 40.0% | |
| GAACCAAAAATCTGAGCAAC+AGG | + | chr2.4:35351553-35351572 | MS.gene64396:intron | 40.0% | |
| GAAGGGAAACCATCGTTTAA+TGG | + | chr2.4:35353195-35353214 | MS.gene64396:CDS | 40.0% | |
| GATGGACACATCACTTATTG+AGG | + | chr2.4:35351990-35352009 | MS.gene64396:intron | 40.0% | |
| GATGTTACATTGCCTGAGAA+AGG | + | chr2.4:35348798-35348817 | MS.gene64396:CDS | 40.0% | |
| GCAGAGGAAATACTATCTAC+AGG | + | chr2.4:35350624-35350643 | MS.gene64396:CDS | 40.0% | |
| GCATTTGTCACCAAAAGTAG+AGG | - | chr2.4:35352110-35352129 | None:intergenic | 40.0% | |
| GCTCATATCAACACCATAGA+AGG | - | chr2.4:35350578-35350597 | None:intergenic | 40.0% | |
| GGCAATCACAGAATACACAA+AGG | - | chr2.4:35349442-35349461 | None:intergenic | 40.0% | |
| GGTGGTTTGATGTACATTTC+CGG | + | chr2.4:35352595-35352614 | MS.gene64396:CDS | 40.0% | |
| GTAATGTGCTGGAAATAGCA+TGG | - | chr2.4:35350273-35350292 | None:intergenic | 40.0% | |
| GTAGATTACTGTACACACTG+GGG | + | chr2.4:35352751-35352770 | MS.gene64396:CDS | 40.0% | |
| GTGGTTTGATGTACATTTCC+GGG | + | chr2.4:35352596-35352615 | MS.gene64396:CDS | 40.0% | |
| GTGTAGATTACTGTACACAC+TGG | + | chr2.4:35352749-35352768 | MS.gene64396:CDS | 40.0% | |
| GTTTATCCGATAGTCTGTGA+GGG | + | chr2.4:35349022-35349041 | MS.gene64396:intron | 40.0% | |
| GTTTCCTGTTTATGCTTACC+AGG | + | chr2.4:35352675-35352694 | MS.gene64396:intron | 40.0% | |
| TAAGATGCTCTGACCTTGTA+TGG | + | chr2.4:35352619-35352638 | MS.gene64396:intron | 40.0% | |
| TAATCTTGAGCAGGTTGTTG+AGG | + | chr2.4:35348755-35348774 | MS.gene64396:CDS | 40.0% | |
| TACAAGCCAGCACATAATGT+AGG | - | chr2.4:35350733-35350752 | None:intergenic | 40.0% | |
| TACGCAAAACCTTGATGTTG+CGG | + | chr2.4:35349350-35349369 | MS.gene64396:intron | 40.0% | |
| TCATCATTGCATGGAAGCAA+GGG | - | chr2.4:35351029-35351048 | None:intergenic | 40.0% | |
| TCTACTATCCCAGTCCTAAT+GGG | - | chr2.4:35350490-35350509 | None:intergenic | 40.0% | |
| TCTATCCTTGTTCCACTGTA+AGG | + | chr2.4:35351180-35351199 | MS.gene64396:intron | 40.0% | |
| TGAACTAGAATGAAGGTCAC+AGG | - | chr2.4:35353063-35353082 | None:intergenic | 40.0% | |
| TGCAATGATGAACTTTGCTG+TGG | + | chr2.4:35351038-35351057 | MS.gene64396:intron | 40.0% | |
| TTCATCATTGCATGGAAGCA+AGG | - | chr2.4:35351030-35351049 | None:intergenic | 40.0% | |
| TTCTACTATCCCAGTCCTAA+TGG | - | chr2.4:35350491-35350510 | None:intergenic | 40.0% | |
| TTGAGTAGAAGAAAGAGCTG+TGG | - | chr2.4:35351598-35351617 | None:intergenic | 40.0% | |
| TTTCTTCCCAGAAACGAAAG+AGG | + | chr2.4:35349609-35349628 | MS.gene64396:intron | 40.0% | |
| TTTGTAATGAGTCGCTCGAA+GGG | + | chr2.4:35353178-35353197 | MS.gene64396:CDS | 40.0% | |
| ! | AGCAGCCGCTATTGTATTTT+TGG | + | chr2.4:35351208-35351227 | MS.gene64396:intron | 40.0% |
| ! | ATTAGCGTAGTCGACTTCTT+TGG | - | chr2.4:35348415-35348434 | None:intergenic | 40.0% |
| ! | GAACATCAACATGTGTTGGT+GGG | + | chr2.4:35350882-35350901 | MS.gene64396:intron | 40.0% |
| ! | GAAGTGGGATTCTTGCTATA+TGG | + | chr2.4:35348649-35348668 | MS.gene64396:CDS | 40.0% |
| ! | GCATGGTAATGTGCAAATTG+GGG | - | chr2.4:35350212-35350231 | None:intergenic | 40.0% |
| ! | TCCCCACATGGAATTCATTT+TGG | + | chr2.4:35350796-35350815 | MS.gene64396:intron | 40.0% |
| ! | TTAGCGTAGTCGACTTCTTT+GGG | - | chr2.4:35348414-35348433 | None:intergenic | 40.0% |
| ! | TTGGTGATAGAGAAAGGAGT+AGG | - | chr2.4:35348448-35348467 | None:intergenic | 40.0% |
| ! | TTTTGTAATGAGTCGCTCGA+AGG | + | chr2.4:35353177-35353196 | MS.gene64396:CDS | 40.0% |
| !! | TATCTCTGTTGGTAATGTGC+TGG | - | chr2.4:35350284-35350303 | None:intergenic | 40.0% |
| !! | TGGTGTTGATATGAGCACTT+TGG | + | chr2.4:35350582-35350601 | MS.gene64396:CDS | 40.0% |
| !!! | GTGTAGGTTGTTTTGGATGT+TGG | + | chr2.4:35348621-35348640 | MS.gene64396:intron | 40.0% |
| ACGGAGAACACAAAACTGTG+TGG | + | chr2.4:35352564-35352583 | MS.gene64396:CDS | 45.0% | |
| AGGACATGTTGAAAGGGAGT+TGG | - | chr2.4:35351461-35351480 | None:intergenic | 45.0% | |
| ATCAGCCCTACATTATGTGC+TGG | + | chr2.4:35350724-35350743 | MS.gene64396:intron | 45.0% | |
| ATGGAACTCATTGAAGGCAG+TGG | - | chr2.4:35352886-35352905 | None:intergenic | 45.0% | |
| ATGGAGGAGGACATGTTGAA+AGG | - | chr2.4:35351468-35351487 | None:intergenic | 45.0% | |
| ATGTCCCTTACAGTGGAACA+AGG | - | chr2.4:35351188-35351207 | None:intergenic | 45.0% | |
| ATGTTGAAAGGGAGTTGGGA+TGG | - | chr2.4:35351456-35351475 | None:intergenic | 45.0% | |
| CAAACTTTGCCATGCTACAG+TGG | + | chr2.4:35351952-35351971 | MS.gene64396:intron | 45.0% | |
| CAATTGTTGCCGCAACATCA+AGG | - | chr2.4:35349362-35349381 | None:intergenic | 45.0% | |
| CAGTCTCCTCTGATGAGATT+TGG | - | chr2.4:35352291-35352310 | None:intergenic | 45.0% | |
| CATCAAGTCATAGGAACTGC+TGG | + | chr2.4:35352459-35352478 | MS.gene64396:CDS | 45.0% | |
| CGTTTAATGGAGGTTGAGCT+TGG | + | chr2.4:35353208-35353227 | MS.gene64396:CDS | 45.0% | |
| CTCTGATGAGATTTGGGCAT+GGG | - | chr2.4:35352284-35352303 | None:intergenic | 45.0% | |
| GAACAATCCTAATCCCCACA+TGG | + | chr2.4:35350784-35350803 | MS.gene64396:intron | 45.0% | |
| GAATGAAGGTCACAGGCTAT+AGG | - | chr2.4:35353056-35353075 | None:intergenic | 45.0% | |
| GCAGGTTGTTGAGGTTATTG+AGG | + | chr2.4:35348764-35348783 | MS.gene64396:CDS | 45.0% | |
| GCAGTTCCTATGACTTGATG+TGG | - | chr2.4:35352459-35352478 | None:intergenic | 45.0% | |
| GCATGCTGTTCTAATCTTCG+CGG | - | chr2.4:35351529-35351548 | None:intergenic | 45.0% | |
| GCTCAACCTCCATTAAACGA+TGG | - | chr2.4:35353207-35353226 | None:intergenic | 45.0% | |
| GGACATGTTGAAAGGGAGTT+GGG | - | chr2.4:35351460-35351479 | None:intergenic | 45.0% | |
| GGGAAACCATCGTTTAATGG+AGG | + | chr2.4:35353198-35353217 | MS.gene64396:CDS | 45.0% | |
| GGTTATTGAGGGTTCTGTTG+AGG | + | chr2.4:35348776-35348795 | MS.gene64396:CDS | 45.0% | |
| GTGCAATGCAAACAAGCAGT+AGG | + | chr2.4:35351738-35351757 | MS.gene64396:intron | 45.0% | |
| GTGCTGGAAATAGCATGGTA+AGG | - | chr2.4:35350268-35350287 | None:intergenic | 45.0% | |
| TAGCTCAGCTGGAAAATGCT+GGG | + | chr2.4:35351708-35351727 | MS.gene64396:intron | 45.0% | |
| TCACCATCACTCACATGTGT+AGG | - | chr2.4:35353142-35353161 | None:intergenic | 45.0% | |
| TCTAGTCCCTCACAGACTAT+CGG | - | chr2.4:35349031-35349050 | None:intergenic | 45.0% | |
| TCTTCGCGGTGTTCTTCTAA+AGG | - | chr2.4:35351515-35351534 | None:intergenic | 45.0% | |
| TGCAAACAAGCAGTAGGTGT+AGG | + | chr2.4:35351744-35351763 | MS.gene64396:intron | 45.0% | |
| TGGAGGAGGACATGTTGAAA+GGG | - | chr2.4:35351467-35351486 | None:intergenic | 45.0% | |
| TGGTATGGTTGCAACTCTGA+TGG | + | chr2.4:35351972-35351991 | MS.gene64396:intron | 45.0% | |
| TTTGCCATGCTACAGTGGTA+TGG | + | chr2.4:35351957-35351976 | MS.gene64396:intron | 45.0% | |
| ! | AAGCAAGGGCTTTTGGATCA+AGG | - | chr2.4:35351015-35351034 | None:intergenic | 45.0% |
| ! | AGCAAGGGCTTTTGGATCAA+GGG | - | chr2.4:35351014-35351033 | None:intergenic | 45.0% |
| ! | AGGAACTGCTGGTCTAGTAA+AGG | + | chr2.4:35352470-35352489 | MS.gene64396:CDS | 45.0% |
| ! | CCGTGAATTGCCTCTACTTT+TGG | + | chr2.4:35352097-35352116 | MS.gene64396:intron | 45.0% |
| ! | TAGCGTAGTCGACTTCTTTG+GGG | - | chr2.4:35348413-35348432 | None:intergenic | 45.0% |
| ! | TTTGGCAAAGCCTTTTGCTG+AGG | + | chr2.4:35350600-35350619 | MS.gene64396:CDS | 45.0% |
| !! | ACACAGTTTTGTGTTCTCCG+TGG | - | chr2.4:35352565-35352584 | None:intergenic | 45.0% |
| !! | TCAAGAGCGCTGTCAAATTG+AGG | + | chr2.4:35351102-35351121 | MS.gene64396:intron | 45.0% |
| !!! | GTTGTTTTGGATGTTGGTGC+TGG | + | chr2.4:35348627-35348646 | MS.gene64396:CDS | 45.0% |
| !! | AAATTAAAATATGTATAAAT+TGG | - | chr2.4:35352406-35352425 | None:intergenic | 5.0% |
| !!! | ATAAGAAAATATTATTTTTT+CGG | + | chr2.4:35349140-35349159 | MS.gene64396:intron | 5.0% |
| !!! | TTTAAAAATATTTATTTTGT+AGG | + | chr2.4:35350434-35350453 | MS.gene64396:intron | 5.0% |
| AAAATCTGAGCAACAGGGGC+AGG | + | chr2.4:35351559-35351578 | MS.gene64396:intron | 50.0% | |
| AAATCTGAGCAACAGGGGCA+GGG | + | chr2.4:35351560-35351579 | MS.gene64396:intron | 50.0% | |
| AACTGTGTGGATATGGAGGG+TGG | + | chr2.4:35352577-35352596 | MS.gene64396:CDS | 50.0% | |
| ACCAGTCAGCTATGGGTGAT+TGG | + | chr2.4:35350527-35350546 | MS.gene64396:CDS | 50.0% | |
| AGCTCAAGCAGGTGCAAAGA+AGG | + | chr2.4:35348674-35348693 | MS.gene64396:CDS | 50.0% | |
| AGCTCAGCTGGAAAATGCTG+GGG | + | chr2.4:35351709-35351728 | MS.gene64396:intron | 50.0% | |
| ATCCACATGCGAGCATGACT+AGG | - | chr2.4:35350463-35350482 | None:intergenic | 50.0% | |
| ATCCTAGTCATGCTCGCATG+TGG | + | chr2.4:35350458-35350477 | MS.gene64396:CDS | 50.0% | |
| CCATCACTCACATGTGTAGG+AGG | - | chr2.4:35353139-35353158 | None:intergenic | 50.0% | |
| CCATGCCCAAATCTCATCAG+AGG | + | chr2.4:35352282-35352301 | MS.gene64396:intron | 50.0% | |
| CCTCCTACACATGTGAGTGA+TGG | + | chr2.4:35353136-35353155 | MS.gene64396:CDS | 50.0% | |
| CCTCTGATGAGATTTGGGCA+TGG | - | chr2.4:35352285-35352304 | None:intergenic | 50.0% | |
| CGCACAGCCATTTCTCTGTT+CGG | - | chr2.4:35351687-35351706 | None:intergenic | 50.0% | |
| CGTCCCTGGTAAGCATAAAC+AGG | - | chr2.4:35352682-35352701 | None:intergenic | 50.0% | |
| CTAGCTCAGCTGGAAAATGC+TGG | + | chr2.4:35351707-35351726 | MS.gene64396:intron | 50.0% | |
| CTGGAAAATGCTGGGGTTTG+TGG | + | chr2.4:35351716-35351735 | MS.gene64396:intron | 50.0% | |
| GAGATATGTCGGAGACTCAC+TGG | - | chr2.4:35351493-35351512 | None:intergenic | 50.0% | |
| GCAACCATACCACTGTAGCA+TGG | - | chr2.4:35351964-35351983 | None:intergenic | 50.0% | |
| GCTATATGGTCAGCTCAAGC+AGG | + | chr2.4:35348663-35348682 | MS.gene64396:CDS | 50.0% | |
| GCTCTCAGATCGTGTTCGTA+TGG | + | chr2.4:35348476-35348495 | MS.gene64396:CDS | 50.0% | |
| GGCGATTACCAGTCAGCTAT+GGG | + | chr2.4:35350520-35350539 | MS.gene64396:CDS | 50.0% | |
| GTAATCTACACTAGGAGCGG+TGG | - | chr2.4:35352740-35352759 | None:intergenic | 50.0% | |
| GTATGCGCCGAACAGAGAAA+TGG | + | chr2.4:35351677-35351696 | MS.gene64396:intron | 50.0% | |
| TAGTCATGCTCGCATGTGGA+TGG | + | chr2.4:35350462-35350481 | MS.gene64396:CDS | 50.0% | |
| TGACTGTTTGACTGCCACAG+TGG | + | chr2.4:35352497-35352516 | MS.gene64396:CDS | 50.0% | |
| TGCAGCTGTGTAAGTGGCTT+TGG | + | chr2.4:35351072-35351091 | MS.gene64396:intron | 50.0% | |
| TTCCTCAATGTCTGCCACTG+TGG | - | chr2.4:35352514-35352533 | None:intergenic | 50.0% | |
| TTCCTCTGCTCCTCAGCAAA+AGG | - | chr2.4:35350613-35350632 | None:intergenic | 50.0% | |
| TTGAAAGGGAGTTGGGATGG+AGG | - | chr2.4:35351453-35351472 | None:intergenic | 50.0% | |
| ! | CAAGGTCAGAGCATCTTACC+CGG | - | chr2.4:35352617-35352636 | None:intergenic | 50.0% |
| ! | GCAAGGGCTTTTGGATCAAG+GGG | - | chr2.4:35351013-35351032 | None:intergenic | 50.0% |
| ! | GCCCCTGTTGCTCAGATTTT+TGG | - | chr2.4:35351559-35351578 | None:intergenic | 50.0% |
| ! | GTAGTCGACTTCTTTGGGGA+CGG | - | chr2.4:35348409-35348428 | None:intergenic | 50.0% |
| ! | TCAACATGTGTTGGTGGGTC+AGG | + | chr2.4:35350887-35350906 | MS.gene64396:intron | 50.0% |
| ! | TGCATGGAAGCAAGGGCTTT+TGG | - | chr2.4:35351022-35351041 | None:intergenic | 50.0% |
| !! | TGGATGTTGGTGCTGGAAGT+GGG | + | chr2.4:35348634-35348653 | MS.gene64396:CDS | 50.0% |
| !! | TTGGATGTTGGTGCTGGAAG+TGG | + | chr2.4:35348633-35348652 | MS.gene64396:CDS | 50.0% |
| AAAGGGAGTTGGGATGGAGG+AGG | - | chr2.4:35351450-35351469 | None:intergenic | 55.0% | |
| AATCTGAGCAACAGGGGCAG+GGG | + | chr2.4:35351561-35351580 | MS.gene64396:intron | 55.0% | |
| AGACTCACTGGAGATGGAGG+AGG | - | chr2.4:35351481-35351500 | None:intergenic | 55.0% | |
| GCATGTGGATGGCACCCATT+AGG | + | chr2.4:35350473-35350492 | MS.gene64396:CDS | 55.0% | |
| GCCAATCACCCATAGCTGAC+TGG | - | chr2.4:35350531-35350550 | None:intergenic | 55.0% | |
| GGATGGCACCCATTAGGACT+GGG | + | chr2.4:35350479-35350498 | MS.gene64396:CDS | 55.0% | |
| GGCTGCTATGTCCCTTACAG+TGG | - | chr2.4:35351195-35351214 | None:intergenic | 55.0% | |
| GGGCGATTACCAGTCAGCTA+TGG | + | chr2.4:35350519-35350538 | MS.gene64396:CDS | 55.0% | |
| TCATATGTGCTCGTGACCGC+TGG | + | chr2.4:35349555-35349574 | MS.gene64396:CDS | 55.0% | |
| TGCCACAGTGGCAGACATTG+AGG | + | chr2.4:35352509-35352528 | MS.gene64396:CDS | 55.0% | |
| TGCTTACCAGGGACGAAGTG+AGG | + | chr2.4:35352687-35352706 | MS.gene64396:intron | 55.0% | |
| TGGATGGCACCCATTAGGAC+TGG | + | chr2.4:35350478-35350497 | MS.gene64396:CDS | 55.0% | |
| TGTCGGAGACTCACTGGAGA+TGG | - | chr2.4:35351487-35351506 | None:intergenic | 55.0% | |
| ! | AGCCTTTTGCTGAGGAGCAG+AGG | + | chr2.4:35350608-35350627 | MS.gene64396:CDS | 55.0% |
| !! | AGAGCAGTTGGTGTTGCACG+AGG | + | chr2.4:35351778-35351797 | MS.gene64396:intron | 55.0% |
| !! | CTCCTGTTGGTTTGAGCCAG+CGG | - | chr2.4:35349574-35349593 | None:intergenic | 55.0% |
| CGGAGACTCACTGGAGATGG+AGG | - | chr2.4:35351484-35351503 | None:intergenic | 60.0% | |
| CTGGATCCTCACTTCGTCCC+TGG | - | chr2.4:35352696-35352715 | None:intergenic | 60.0% | |
| CTGTACACACTGGGGTCAGC+AGG | + | chr2.4:35352759-35352778 | MS.gene64396:CDS | 60.0% | |
| ! | GTCGACTTCTTTGGGGACGG+CGG | - | chr2.4:35348406-35348425 | None:intergenic | 60.0% |
| !! | GACCGCTGGCTCAAACCAAC+AGG | + | chr2.4:35349569-35349588 | MS.gene64396:CDS | 60.0% |
| TCTTCCGAAAACGCCGCCGC+TGG | + | chr2.4:35348369-35348388 | MS.gene64396:CDS | 65.0% | |
| TGGCTGTGCGCTAGCTCAGC+TGG | + | chr2.4:35351697-35351716 | MS.gene64396:intron | 65.0% | |
| TCCGAAAACGCCGCCGCTGG+TGG | + | chr2.4:35348372-35348391 | MS.gene64396:CDS | 70.0% | |
| ! | CTTTGGGGACGGCGGTGCCT+CGG | - | chr2.4:35348398-35348417 | None:intergenic | 70.0% |
| ! | GCCACCAGCGGCGGCGTTTT+CGG | - | chr2.4:35348376-35348395 | None:intergenic | 70.0% |
| ! | AACGCCGCCGCTGGTGGCCG+AGG | + | chr2.4:35348378-35348397 | MS.gene64396:CDS | 80.0% |
| ! | GGCGGTGCCTCGGCCACCAG+CGG | - | chr2.4:35348388-35348407 | None:intergenic | 80.0% |
| ! | GGTGCCTCGGCCACCAGCGG+CGG | - | chr2.4:35348385-35348404 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 35348360 | 35353297 | 35348360 | ID=MS.gene64396 |
| chr2.4 | mRNA | 35348360 | 35353297 | 35348360 | ID=MS.gene64396.t1;Parent=MS.gene64396 |
| chr2.4 | exon | 35348360 | 35348548 | 35348360 | ID=MS.gene64396.t1.exon1;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35348360 | 35348548 | 35348360 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35348627 | 35348819 | 35348627 | ID=MS.gene64396.t1.exon2;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35348627 | 35348819 | 35348627 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35349492 | 35349597 | 35349492 | ID=MS.gene64396.t1.exon3;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35349492 | 35349597 | 35349492 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35350456 | 35350645 | 35350456 | ID=MS.gene64396.t1.exon4;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35350456 | 35350645 | 35350456 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35352432 | 35352617 | 35352432 | ID=MS.gene64396.t1.exon5;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35352432 | 35352617 | 35352432 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35352697 | 35352780 | 35352697 | ID=MS.gene64396.t1.exon6;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35352697 | 35352780 | 35352697 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| chr2.4 | exon | 35353121 | 35353297 | 35353121 | ID=MS.gene64396.t1.exon7;Parent=MS.gene64396.t1 |
| chr2.4 | CDS | 35353121 | 35353297 | 35353121 | ID=cds.MS.gene64396.t1;Parent=MS.gene64396.t1 |
| Gene Sequence |
| Protein sequence |
