AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064036

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064036.t1 MTR_6g091770 100.000 306 0 0 1 306 78 383 0.0 640
MS.gene064036.t1 MTR_1g113940 35.048 311 181 6 1 293 25 332 9.41e-52 174
MS.gene064036.t1 MTR_3g013960 36.789 299 151 9 1 264 269 564 3.26e-51 178
MS.gene064036.t1 MTR_4g119900 36.299 281 166 7 1 270 155 433 2.17e-50 174
MS.gene064036.t1 MTR_2g054880 32.836 335 192 10 1 303 39 372 3.08e-50 171
MS.gene064036.t1 MTR_4g119900 36.299 281 166 7 1 270 155 433 3.29e-50 174
MS.gene064036.t1 MTR_2g436780 35.231 281 169 7 1 270 157 435 8.21e-48 167
MS.gene064036.t1 MTR_2g436780 35.231 281 169 7 1 270 157 435 1.07e-47 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064036.t1 AT4G29510 82.680 306 53 0 1 306 85 390 0.0 549
MS.gene064036.t1 AT2G19670 79.085 306 64 0 1 306 61 366 0.0 527
MS.gene064036.t1 AT3G20020 39.157 332 162 4 1 293 96 426 2.49e-74 234
MS.gene064036.t1 AT3G20020 39.210 329 160 4 1 290 96 423 1.24e-73 233
MS.gene064036.t1 AT3G20020 36.446 332 149 4 1 293 96 404 1.26e-62 204
MS.gene064036.t1 AT3G12270 37.801 291 156 8 1 269 258 545 1.62e-54 187
MS.gene064036.t1 AT1G04870 33.019 318 177 8 1 286 48 361 2.10e-51 174
MS.gene064036.t1 AT3G06930 33.663 303 188 7 1 292 161 461 3.18e-49 171
MS.gene064036.t1 AT3G06930 33.663 303 188 7 1 292 161 461 3.30e-49 171
MS.gene064036.t1 AT5G49020 33.876 307 190 7 1 296 162 466 5.16e-49 171
MS.gene064036.t1 AT5G49020 33.876 307 190 7 1 296 164 468 5.91e-49 171
MS.gene064036.t1 AT1G04870 29.008 262 150 8 57 286 1 258 2.49e-29 113

Find 54 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAAGAAGCAAGCCTTGA+TGG 0.279886 6.1:+79369027 MS.gene064036:CDS
TCAGTTTGGAACAATGTATA+TGG 0.294266 6.1:+79368989 MS.gene064036:intron
CGAGCAGCAACAAGCTTAAA+AGG 0.295407 6.1:-79369324 None:intergenic
AGATAGAGTGATGCAATATC+TGG 0.297140 6.1:-79368672 None:intergenic
GGAAATGATTATATCAACTT+TGG 0.337090 6.1:-79368438 None:intergenic
GAAACAAACAGTCCTATATC+TGG 0.356556 6.1:+79369956 MS.gene064036:CDS
GAAATGATTATATCAACTTT+GGG 0.370774 6.1:-79368437 None:intergenic
TTTGTAATCTTTATCTTCAA+TGG 0.372756 6.1:-79368700 None:intergenic
GACATGTGCTGCCCCTGCTT+TGG 0.382365 6.1:-79368087 None:intergenic
CAATGTGTACTCCGCGATCT+TGG 0.388811 6.1:-79369933 None:intergenic
AGTTCGTTGCGATCTGATTC+TGG 0.393515 6.1:-79369072 None:intergenic
ATTATATCAACTTTGGGAAC+AGG 0.394493 6.1:-79368431 None:intergenic
CTTGATGTCGGTGCCGGGAC+TGG 0.401470 6.1:+79368044 MS.gene064036:CDS
GAAACTAATGGTTATTCTAA+AGG 0.402861 6.1:+79368250 MS.gene064036:CDS
AAATTGATGGGCTTCTCAAC+AGG 0.411678 6.1:+79369405 MS.gene064036:CDS
AAAACGTTATTTATCAGAAT+AGG 0.416237 6.1:+79367997 MS.gene064036:CDS
TCAAGACATCTTCCAGATAT+AGG 0.420611 6.1:-79369968 None:intergenic
TACAAAGTGTCATAAATTGA+TGG 0.424292 6.1:+79369392 MS.gene064036:CDS
CACATTGCAGGAAATGTTGA+AGG 0.429613 6.1:+79367950 None:intergenic
TGCTCTTTGCACGTGACAAA+TGG 0.430259 6.1:+79368507 MS.gene064036:CDS
TCACTATTCTGTGCCAAAGC+AGG 0.443662 6.1:+79368074 MS.gene064036:CDS
ACAAAGTGTCATAAATTGAT+GGG 0.472701 6.1:+79369393 MS.gene064036:CDS
GCAGGTCGAGTGCTCTCATA+TGG 0.479543 6.1:+79368204 MS.gene064036:intron
TATAATCATTTCCGAATGGA+TGG 0.481760 6.1:+79368448 MS.gene064036:CDS
ATGCTCAAGTATTCATTGAA+TGG 0.485369 6.1:+79370068 MS.gene064036:CDS
GTAGTTCTTGATGTCGGTGC+CGG 0.486285 6.1:+79368038 MS.gene064036:CDS
AAGGAAATAGTTGAAACTAA+TGG 0.493872 6.1:+79368238 MS.gene064036:CDS
AGTGCTCTCATATGGCTGAC+AGG 0.495608 6.1:+79368212 MS.gene064036:CDS
CACTATTCTGTGCCAAAGCA+GGG 0.510201 6.1:+79368075 MS.gene064036:CDS
CAAGAAATATCCCATCCATT+CGG 0.524018 6.1:-79368459 None:intergenic
TAGTTCTTGATGTCGGTGCC+GGG 0.525835 6.1:+79368039 MS.gene064036:CDS
TCAAGTATTCATTGAATGGC+AGG 0.530106 6.1:+79370072 MS.gene064036:CDS
CAGGCGATGCAATGCTTCGA+GGG 0.549835 6.1:+79370091 MS.gene064036:CDS
TAGTGATAAAATTCCAGTCC+CGG 0.559941 6.1:-79368057 None:intergenic
GCAGGCGATGCAATGCTTCG+AGG 0.569433 6.1:+79370090 MS.gene064036:CDS
GATAGAGTGATGCAATATCT+GGG 0.576462 6.1:-79368671 None:intergenic
TCATATGGCTGACAGGGCAA+AGG 0.579225 6.1:+79368219 MS.gene064036:CDS
TTGATATAATCATTTCCGAA+TGG 0.588889 6.1:+79368444 MS.gene064036:CDS
AATAAAGTAGTTCTTGATGT+CGG 0.594677 6.1:+79368032 MS.gene064036:CDS
GATGTCTTGACCATTTGTGA+GGG 0.596606 6.1:+79369981 MS.gene064036:CDS
TGGTCAACTGTGTCAACAAG+AGG 0.597351 6.1:-79369052 None:intergenic
GTCAACAAGAGGCTCCATCA+AGG 0.601626 6.1:-79369041 None:intergenic
ATAATCATTTCCGAATGGAT+GGG 0.608420 6.1:+79368449 MS.gene064036:CDS
AACGAACTGTCAGCTACTCA+AGG 0.616591 6.1:+79369087 MS.gene064036:CDS
GTAATCTTTATCTTCAATGG+CGG 0.617207 6.1:-79368697 None:intergenic
GTGCTCTCATATGGCTGACA+GGG 0.621520 6.1:+79368213 MS.gene064036:CDS
TGTCTTGACCATTTGTGAGG+GGG 0.625821 6.1:+79369983 MS.gene064036:CDS
CAAGATCGCGGAGTACACAT+TGG 0.628631 6.1:+79369934 MS.gene064036:CDS
TATTTCCAGGGCCAAGATCG+CGG 0.631638 6.1:+79369922 MS.gene064036:intron
ATGTCTTGACCATTTGTGAG+GGG 0.652961 6.1:+79369982 MS.gene064036:CDS
AGATGTCTTGACCATTTGTG+AGG 0.654125 6.1:+79369980 MS.gene064036:CDS
AGCATTATATCAACATCCCG+AGG 0.654468 6.1:-79370050 None:intergenic
ACTATTCTGTGCCAAAGCAG+GGG 0.658809 6.1:+79368076 MS.gene064036:CDS
AATTGTAGGGAGCATGACTG+TGG 0.688544 6.1:+79370010 MS.gene064036:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTTAAAAAAAGAAAATT+GGG + chr6.1:79369539-79369558 MS.gene064036:intron 10.0%
!! TATTCTTAAAAAAAGAAAAT+TGG + chr6.1:79369538-79369557 MS.gene064036:intron 10.0%
!! AAATGATATTATAACAAAGA+CGG - chr6.1:79369834-79369853 None:intergenic 15.0%
!! TTCTTAAAAAAAGAAAATTG+GGG + chr6.1:79369540-79369559 MS.gene064036:intron 15.0%
!!! ATTCATTTTTATCATTTTAG+TGG + chr6.1:79369869-79369888 MS.gene064036:intron 15.0%
!!! TTGTTATAATATCATTTTAG+TGG + chr6.1:79369837-79369856 MS.gene064036:intron 15.0%
!!! TTTCTTTTTTTTTTTTGTGT+AGG + chr6.1:79368629-79368648 MS.gene064036:intron 15.0%
!! AAAACGTTATTTATCAGAAT+AGG + chr6.1:79367997-79368016 MS.gene064036:CDS 20.0%
!! ATTTGTGTTTAAACAAAACT+AGG - chr6.1:79368910-79368929 None:intergenic 20.0%
!! GAAATGATTATATCAACTTT+GGG - chr6.1:79368440-79368459 None:intergenic 20.0%
!! TTTGTAATCTTTATCTTCAA+TGG - chr6.1:79368703-79368722 None:intergenic 20.0%
!!! AATTTTAAAACTGTTCCAAA+TGG + chr6.1:79369600-79369619 MS.gene064036:intron 20.0%
!!! ATTTTAAAACTGTTCCAAAT+GGG + chr6.1:79369601-79369620 MS.gene064036:intron 20.0%
!!! CATGTATTTTTTCTGAAAAT+CGG + chr6.1:79369755-79369774 MS.gene064036:intron 20.0%
!!! GATGAAATTTTCTTTTCATT+TGG + chr6.1:79369189-79369208 MS.gene064036:intron 20.0%
! AAACAAAACTAGGAATTTCA+AGG - chr6.1:79368900-79368919 None:intergenic 25.0%
! AACTGTAGAAAACAACATTA+TGG - chr6.1:79368372-79368391 None:intergenic 25.0%
! AAGGAAATAGTTGAAACTAA+TGG + chr6.1:79368238-79368257 MS.gene064036:CDS 25.0%
! AATAAAGTAGTTCTTGATGT+CGG + chr6.1:79368032-79368051 MS.gene064036:CDS 25.0%
! GAAACTAATGGTTATTCTAA+AGG + chr6.1:79368250-79368269 MS.gene064036:CDS 25.0%
! GGAAATGATTATATCAACTT+TGG - chr6.1:79368441-79368460 None:intergenic 25.0%
! TAAAAAAAGAAAATTGGGGA+GGG + chr6.1:79369544-79369563 MS.gene064036:intron 25.0%
! TGTGTACATATATATTTCCA+GGG + chr6.1:79369910-79369929 MS.gene064036:intron 25.0%
! TTAAAAAAAGAAAATTGGGG+AGG + chr6.1:79369543-79369562 MS.gene064036:intron 25.0%
! TTCCAAACTGATATAGAAAA+TGG - chr6.1:79368980-79368999 None:intergenic 25.0%
! TTGATATAATCATTTCCGAA+TGG + chr6.1:79368444-79368463 MS.gene064036:CDS 25.0%
! TTGTGTACATATATATTTCC+AGG + chr6.1:79369909-79369928 MS.gene064036:intron 25.0%
! TTTCAGAGACAAATAAGTAT+TGG - chr6.1:79368803-79368822 None:intergenic 25.0%
!! ACAAAGTGTCATAAATTGAT+GGG + chr6.1:79369393-79369412 MS.gene064036:CDS 25.0%
!! TACAAAGTGTCATAAATTGA+TGG + chr6.1:79369392-79369411 MS.gene064036:CDS 25.0%
!! TTCCATTTTCTATATCAGTT+TGG + chr6.1:79368975-79368994 MS.gene064036:intron 25.0%
!!! AATAACGTTTTGATATGTCT+TGG - chr6.1:79367988-79368007 None:intergenic 25.0%
!!! ACAGTTATAACAGTTTTGAA+AGG + chr6.1:79368386-79368405 MS.gene064036:intron 25.0%
!!! CAGTTATAACAGTTTTGAAA+GGG + chr6.1:79368387-79368406 MS.gene064036:intron 25.0%
!!! CTTTTTTTTTTTTGTGTAGG+TGG + chr6.1:79368632-79368651 MS.gene064036:intron 25.0%
AAAAAAAGAAAATTGGGGAG+GGG + chr6.1:79369545-79369564 MS.gene064036:intron 30.0%
ACTACTTATCAACAAGAGTA+AGG - chr6.1:79368550-79368569 None:intergenic 30.0%
ACTCAATCATATTTAGCAAG+AGG - chr6.1:79368754-79368773 None:intergenic 30.0%
ATAATCATTTCCGAATGGAT+GGG + chr6.1:79368449-79368468 MS.gene064036:CDS 30.0%
ATATTGCATGTACTAGAATC+TGG + chr6.1:79368577-79368596 MS.gene064036:intron 30.0%
ATGCTCAAGTATTCATTGAA+TGG + chr6.1:79370068-79370087 MS.gene064036:CDS 30.0%
CAAATGATATTTGTGTCATC+AGG + chr6.1:79368925-79368944 MS.gene064036:intron 30.0%
CAATTTCTCAATTCCGTATT+CGG - chr6.1:79368854-79368873 None:intergenic 30.0%
CCACAAAAACTAAAGTAGAA+AGG - chr6.1:79369437-79369456 None:intergenic 30.0%
CTTGTATTTCATTCCGAATA+CGG + chr6.1:79368838-79368857 MS.gene064036:intron 30.0%
GACATAATTCAAAACCCATT+TGG - chr6.1:79369618-79369637 None:intergenic 30.0%
GGGATTATTATCAATTAGTG+TGG + chr6.1:79369567-79369586 MS.gene064036:intron 30.0%
GTAATCTTTATCTTCAATGG+CGG - chr6.1:79368700-79368719 None:intergenic 30.0%
TATAATCATTTCCGAATGGA+TGG + chr6.1:79368448-79368467 MS.gene064036:CDS 30.0%
TGCGTGTGCAAAATTTAAAA+TGG - chr6.1:79368187-79368206 None:intergenic 30.0%
TGTATGAAACATACAATGCA+AGG - chr6.1:79369155-79369174 None:intergenic 30.0%
TTAACTGAACTGAAAAGAAC+TGG + chr6.1:79369709-79369728 MS.gene064036:intron 30.0%
! ATTATATCAACTTTGGGAAC+AGG - chr6.1:79368434-79368453 None:intergenic 30.0%
! ATTTTAAATTTTGCACACGC+AGG + chr6.1:79368186-79368205 MS.gene064036:intron 30.0%
! TCAGTTTGGAACAATGTATA+TGG + chr6.1:79368989-79369008 MS.gene064036:intron 30.0%
!! GAGACAAATAAGTATTGGTT+TGG - chr6.1:79368798-79368817 None:intergenic 30.0%
!! GTTTTGAATTATGTCACTTG+AGG + chr6.1:79369623-79369642 MS.gene064036:intron 30.0%
!!! CCTTTCTACTTTAGTTTTTG+TGG + chr6.1:79369434-79369453 MS.gene064036:intron 30.0%
AAAAAAGAAAATTGGGGAGG+GGG + chr6.1:79369546-79369565 MS.gene064036:intron 35.0%
AGATAGAGTGATGCAATATC+TGG - chr6.1:79368675-79368694 None:intergenic 35.0%
CAAGAAATATCCCATCCATT+CGG - chr6.1:79368462-79368481 None:intergenic 35.0%
CCCAAATAAAAAGAATCCTC+GGG + chr6.1:79370034-79370053 MS.gene064036:CDS 35.0%
CCCCAAATAAAAAGAATCCT+CGG + chr6.1:79370033-79370052 MS.gene064036:CDS 35.0%
GAAACAAACAGTCCTATATC+TGG + chr6.1:79369956-79369975 MS.gene064036:CDS 35.0%
GACATCTCAAAAATGTCTTC+TGG + chr6.1:79369282-79369301 MS.gene064036:CDS 35.0%
GATAGAGTGATGCAATATCT+GGG - chr6.1:79368674-79368693 None:intergenic 35.0%
TAGTGATAAAATTCCAGTCC+CGG - chr6.1:79368060-79368079 None:intergenic 35.0%
TCAAGACATCTTCCAGATAT+AGG - chr6.1:79369971-79369990 None:intergenic 35.0%
TCAAGTATTCATTGAATGGC+AGG + chr6.1:79370072-79370091 MS.gene064036:CDS 35.0%
TTCAGTATATTACCTTCTGC+CGG + chr6.1:79368312-79368331 MS.gene064036:intron 35.0%
! TCCCGAGGATTCTTTTTATT+TGG - chr6.1:79370038-79370057 None:intergenic 35.0%
!! CATAAAAGCATCATCAGAAC+TGG - chr6.1:79369123-79369142 None:intergenic 35.0%
!! CCCGAGGATTCTTTTTATTT+GGG - chr6.1:79370037-79370056 None:intergenic 35.0%
!! CCGAGGATTCTTTTTATTTG+GGG - chr6.1:79370036-79370055 None:intergenic 35.0%
!!! AGACATTTTTGAGATGTCCA+TGG - chr6.1:79369280-79369299 None:intergenic 35.0%
!!! TTTTTTGTGTAGGTGGATGA+TGG + chr6.1:79368639-79368658 MS.gene064036:intron 35.0%
AAAAAGAAAATTGGGGAGGG+GGG + chr6.1:79369547-79369566 MS.gene064036:intron 40.0%
AACAAAGACGGAACCACAAA+TGG - chr6.1:79369822-79369841 None:intergenic 40.0%
ACAAAGACGGAACCACAAAT+GGG - chr6.1:79369821-79369840 None:intergenic 40.0%
AGATGTCTTGACCATTTGTG+AGG + chr6.1:79369980-79369999 MS.gene064036:CDS 40.0%
AGCATTATATCAACATCCCG+AGG - chr6.1:79370053-79370072 None:intergenic 40.0%
ATGTCTTGACCATTTGTGAG+GGG + chr6.1:79369982-79370001 MS.gene064036:CDS 40.0%
GATGTCTTGACCATTTGTGA+GGG + chr6.1:79369981-79370000 MS.gene064036:CDS 40.0%
GTTCATCTTTGTTCAGTCCA+TGG + chr6.1:79369260-79369279 MS.gene064036:intron 40.0%
TTCAACAGTCTTCCCATTTG+TGG + chr6.1:79369806-79369825 MS.gene064036:intron 40.0%
TTGCATGTACTAGAATCTGG+TGG + chr6.1:79368580-79368599 MS.gene064036:intron 40.0%
TTGTGGTCTGCTTTGTCAAT+AGG + chr6.1:79369451-79369470 MS.gene064036:intron 40.0%
!! AAATTGATGGGCTTCTCAAC+AGG + chr6.1:79369405-79369424 MS.gene064036:CDS 40.0%
!! TATCATTTTAGTGGCGAGTG+TGG + chr6.1:79369846-79369865 MS.gene064036:intron 40.0%
AACGAACTGTCAGCTACTCA+AGG + chr6.1:79369087-79369106 MS.gene064036:CDS 45.0%
AACTGTCAGCTACTCAAGGT+CGG + chr6.1:79369091-79369110 MS.gene064036:intron 45.0%
AATTGTCTCCCCCTCACAAA+TGG - chr6.1:79369994-79370013 None:intergenic 45.0%
ACTATTCTGTGCCAAAGCAG+GGG + chr6.1:79368076-79368095 MS.gene064036:CDS 45.0%
AGTATATTACCTTCTGCCGG+AGG + chr6.1:79368315-79368334 MS.gene064036:intron 45.0%
AGTTCGTTGCGATCTGATTC+TGG - chr6.1:79369075-79369094 None:intergenic 45.0%
CACATGATGTGTCAGCTCAA+TGG - chr6.1:79369668-79369687 None:intergenic 45.0%
CACTATTCTGTGCCAAAGCA+GGG + chr6.1:79368075-79368094 MS.gene064036:CDS 45.0%
CATCAAGAAGCAAGCCTTGA+TGG + chr6.1:79369027-79369046 MS.gene064036:CDS 45.0%
CGAGCAGCAACAAGCTTAAA+AGG - chr6.1:79369327-79369346 None:intergenic 45.0%
GGTCTGCTTTGTCAATAGGA+AGG + chr6.1:79369455-79369474 MS.gene064036:intron 45.0%
GTATATTACCTTCTGCCGGA+GGG + chr6.1:79368316-79368335 MS.gene064036:intron 45.0%
TCACTATTCTGTGCCAAAGC+AGG + chr6.1:79368074-79368093 MS.gene064036:CDS 45.0%
TGCTCTTTGCACGTGACAAA+TGG + chr6.1:79368507-79368526 MS.gene064036:CDS 45.0%
TGGTCAACTGTGTCAACAAG+AGG - chr6.1:79369055-79369074 None:intergenic 45.0%
TGTCTTGACCATTTGTGAGG+GGG + chr6.1:79369983-79370002 MS.gene064036:CDS 45.0%
! AATTGTAGGGAGCATGACTG+TGG + chr6.1:79370010-79370029 MS.gene064036:CDS 45.0%
AGTGCTCTCATATGGCTGAC+AGG + chr6.1:79368212-79368231 MS.gene064036:CDS 50.0%
CAAGATCGCGGAGTACACAT+TGG + chr6.1:79369934-79369953 MS.gene064036:CDS 50.0%
CAATGTGTACTCCGCGATCT+TGG - chr6.1:79369936-79369955 None:intergenic 50.0%
CCTTTCACGATCAATCCCTC+CGG - chr6.1:79368334-79368353 None:intergenic 50.0%
GTAGTTCTTGATGTCGGTGC+CGG + chr6.1:79368038-79368057 MS.gene064036:CDS 50.0%
GTCAACAAGAGGCTCCATCA+AGG - chr6.1:79369044-79369063 None:intergenic 50.0%
GTGAGGGGGAGACAATTGTA+GGG + chr6.1:79369997-79370016 MS.gene064036:CDS 50.0%
GTGCTCTCATATGGCTGACA+GGG + chr6.1:79368213-79368232 MS.gene064036:CDS 50.0%
TATTTCCAGGGCCAAGATCG+CGG + chr6.1:79369922-79369941 MS.gene064036:intron 50.0%
TCATATGGCTGACAGGGCAA+AGG + chr6.1:79368219-79368238 MS.gene064036:CDS 50.0%
TGTGAGGGGGAGACAATTGT+AGG + chr6.1:79369996-79370015 MS.gene064036:CDS 50.0%
! TAGTTCTTGATGTCGGTGCC+GGG + chr6.1:79368039-79368058 MS.gene064036:CDS 50.0%
CAGGCGATGCAATGCTTCGA+GGG + chr6.1:79370091-79370110 MS.gene064036:CDS 55.0%
CCGGAGGGATTGATCGTGAA+AGG + chr6.1:79368331-79368350 MS.gene064036:intron 55.0%
GCAGGTCGAGTGCTCTCATA+TGG + chr6.1:79368204-79368223 MS.gene064036:intron 55.0%
CGATCAATCCCTCCGGCAGA+AGG - chr6.1:79368327-79368346 None:intergenic 60.0%
GACATGTGCTGCCCCTGCTT+TGG - chr6.1:79368090-79368109 None:intergenic 60.0%
GCAGGCGATGCAATGCTTCG+AGG + chr6.1:79370090-79370109 MS.gene064036:CDS 60.0%
GTACTCCGCGATCTTGGCCC+TGG - chr6.1:79369930-79369949 None:intergenic 65.0%
!! CTTGATGTCGGTGCCGGGAC+TGG + chr6.1:79368044-79368063 MS.gene064036:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 79367963 79370136 79367963 ID=MS.gene064036
chr6.1 mRNA 79367963 79370136 79367963 ID=MS.gene064036.t1;Parent=MS.gene064036
chr6.1 exon 79367963 79368115 79367963 ID=MS.gene064036.t1.exon1;Parent=MS.gene064036.t1
chr6.1 CDS 79367963 79368115 79367963 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79368208 79368271 79368208 ID=MS.gene064036.t1.exon2;Parent=MS.gene064036.t1
chr6.1 CDS 79368208 79368271 79368208 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79368390 79368532 79368390 ID=MS.gene064036.t1.exon3;Parent=MS.gene064036.t1
chr6.1 CDS 79368390 79368532 79368390 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79368651 79368738 79368651 ID=MS.gene064036.t1.exon4;Parent=MS.gene064036.t1
chr6.1 CDS 79368651 79368738 79368651 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79368993 79369108 79368993 ID=MS.gene064036.t1.exon5;Parent=MS.gene064036.t1
chr6.1 CDS 79368993 79369108 79368993 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79369276 79369426 79369276 ID=MS.gene064036.t1.exon6;Parent=MS.gene064036.t1
chr6.1 CDS 79369276 79369426 79369276 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
chr6.1 exon 79369931 79370136 79369931 ID=MS.gene064036.t1.exon7;Parent=MS.gene064036.t1
chr6.1 CDS 79369931 79370136 79369931 ID=cds.MS.gene064036.t1;Parent=MS.gene064036.t1
Gene Sequence

>MS.gene064036

ATGTTGAAGGACACTGTAAGAACCAAGACATATCAAAACGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTCGGTGCCGGGACTGGAATTTTATCACTATTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTGAGTTTCTGACTTTGCTTTTATCATTTTTGTGCTCTTAGTCATCATGATGATCATTTTCAATTCAACCATTTTAAATTTTGCACACGCAGGTCGAGTGCTCTCATATGGCTGACAGGGCAAAGGAAATAGTTGAAACTAATGGTTATTCTAAAGGTAGTATCATTGATATATTTGTATTATTGTATATTTAATTTTCAGTATATTACCTTCTGCCGGAGGGATTGATCGTGAAAGGCACTAACTATAATTACCATAATGTTGTTTTCTACAGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCTGTTCCCAAAGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCTGTGCTCTTTGCACGTGACAAATGGCTTGTGAGTTACATTTTCCTTACTCTTGTTGATAAGTAGTCGATTATATATTGCATGTACTAGAATCTGGTGGTCATTACTTTGACACATTCTTTTTTTTTTCTTTTTTTTTTTTGTGTAGGTGGATGATGGAGTTATTCTCCCAGATATTGCATCACTCTATCTTACCGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTGTGAGCTTTTGACCTCTTGCTAAATATGATTGAGTCTTTTATACATGAAAAGATGTCCAAACCAATACTTATTTGTCTCTGAAACTGACATGCAAATTTCTTGTATTTCATTCCGAATACGGAATTGAGAAATTGTGACTGACTGCTGTTGTTGAAAACCTTGAAATTCCTAGTTTTGTTTAAACACAAATGATATTTGTGTCATCAGGTGTATTTAATTTTCTTGTTAATTATATTTCCATTTTCTATATCAGTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCTTGATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATCGCAACGAACTGTCAGCTACTCAAGGTCGGTAATATCCAGTTCTGATGATGCTTTTATGTTTAATGTACCTTGCATTGTATGTTTCATACAACAATGTCTACAATGATGAAATTTTCTTTTCATTTGGTGCAATAGTTTCTTGTTAGAATGCAAAGATTTGTATTTGTGCTGACTTGTTCATCTTTGTTCAGTCCATGGACATCTCAAAAATGTCTTCTGGAGACTGTTCATTCACAGCGCCTTTTAAGCTTGTTGCTGCTCGTGACGATTTCATTCATGCTTTTGTTGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCAACAGGTTAGTTCCTTTCTACTTTAGTTTTTGTGGTCTGCTTTGTCAATAGGAAGGATGAACATTGAAGTCTGTTTATTGATTCTTTCTAATAATTTGCATGTAGAAGTACGATCATATTCTTAAAAAAAGAAAATTGGGGAGGGGGGATTATTATCAATTAGTGTGGCACTAACGACAATTTTAAAACTGTTCCAAATGGGTTTTGAATTATGTCACTTGAGGTTATAAAGTCAAACTCGTACCATTGAGCTGACACATCATGTGCAAATATGATGATATTTGCTTTTAACTGAACTGAAAAGAACTGGTATTGCTTCTGAAACTATGTTTGCATGTATTTTTTCTGAAAATCGGTTGCTGAAAACTTGTACACAAGAGTTCTTTCAACAGTCTTCCCATTTGTGGTTCCGTCTTTGTTATAATATCATTTTAGTGGCGAGTGTGGATTCATTTTTATCATTTTAGTGGCGAGTGTGGATTCATTTTTGTGTACATATATATTTCCAGGGCCAAGATCGCGGAGTACACATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGACAATTGTAGGGAGCATGACTGTGGCCCCAAATAAAAAGAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAGGCGATGCAATGCTTCGAGGGTTCAGTATTACAAGATGCGTTGA
Protein sequence

>MS.gene064036.t1

MLKDTVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAAHVYAVECSHMADRAKEIVETNGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLFARDKWLVDDGVILPDIASLYLTAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNCQLLKSMDISKMSSGDCSFTAPFKLVAARDDFIHAFVAYFDVSFTKCHKLMGFSTGPRSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNASRVQYYKMR