Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65451.t1 | RHN78531.1 | 92.6 | 624 | 35 | 2 | 1 | 613 | 245 | 868 | 0.00E+00 | 1130.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65451.t1 | F4JUQ2 | 52.1 | 668 | 239 | 12 | 1 | 612 | 278 | 920 | 1.3e-183 | 644.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65451.t1 | A0A072VSI4 | 92.6 | 624 | 35 | 2 | 1 | 613 | 190 | 813 | 0.0e+00 | 1130.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene65451 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene049660 | MS.gene65451 | 0.819501 | 1.12E-52 | -1.69E-46 |
| MS.gene04985 | MS.gene65451 | 0.834848 | 2.36E-56 | -1.69E-46 |
| MS.gene049989 | MS.gene65451 | 0.849351 | 3.42E-60 | -1.69E-46 |
| MS.gene050297 | MS.gene65451 | 0.832133 | 1.12E-55 | -1.69E-46 |
| MS.gene050310 | MS.gene65451 | 0.815074 | 1.11E-51 | -1.69E-46 |
| MS.gene05054 | MS.gene65451 | 0.819152 | 1.35E-52 | -1.69E-46 |
| MS.gene050648 | MS.gene65451 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene051067 | MS.gene65451 | 0.817148 | 3.83E-52 | -1.69E-46 |
| MS.gene051263 | MS.gene65451 | 0.842746 | 2.14E-58 | -1.69E-46 |
| MS.gene051478 | MS.gene65451 | 0.829794 | 4.22E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene65451 | 0.837386 | 5.36E-57 | -1.69E-46 |
| MS.gene052143 | MS.gene65451 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene052151 | MS.gene65451 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene053348 | MS.gene65451 | 0.864784 | 9.48E-65 | -1.69E-46 |
| MS.gene053536 | MS.gene65451 | 0.841902 | 3.58E-58 | -1.69E-46 |
| MS.gene053538 | MS.gene65451 | 0.838481 | 2.80E-57 | -1.69E-46 |
| MS.gene054551 | MS.gene65451 | 0.802872 | 4.56E-49 | -1.69E-46 |
| MS.gene054999 | MS.gene65451 | 0.855133 | 7.74E-62 | -1.69E-46 |
| MS.gene055764 | MS.gene65451 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene65451 | 0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene65451 | 0.808751 | 2.65E-50 | -1.69E-46 |
| MS.gene056042 | MS.gene65451 | 0.82075 | 5.82E-53 | -1.69E-46 |
| MS.gene056169 | MS.gene65451 | 0.815425 | 9.31E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene65451 | 0.839801 | 1.27E-57 | -1.69E-46 |
| MS.gene057004 | MS.gene65451 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene65451 | 0.829833 | 4.13E-55 | -1.69E-46 |
| MS.gene058198 | MS.gene65451 | 0.826761 | 2.27E-54 | -1.69E-46 |
| MS.gene05894 | MS.gene65451 | 0.84171 | 4.03E-58 | -1.69E-46 |
| MS.gene059300 | MS.gene65451 | 0.846123 | 2.65E-59 | -1.69E-46 |
| MS.gene059424 | MS.gene65451 | 0.832423 | 9.54E-56 | -1.69E-46 |
| MS.gene060473 | MS.gene65451 | 0.815683 | 8.15E-52 | -1.69E-46 |
| MS.gene060492 | MS.gene65451 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene060565 | MS.gene65451 | 0.820087 | 8.26E-53 | -1.69E-46 |
| MS.gene06057 | MS.gene65451 | 0.818416 | 1.98E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65451.t1 | MTR_1g041685 | 93.429 | 624 | 30 | 2 | 1 | 613 | 190 | 813 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65451.t1 | AT4G14310 | 54.290 | 641 | 239 | 11 | 1 | 612 | 278 | 893 | 0.0 | 678 |
| MS.gene65451.t1 | AT4G14310 | 52.096 | 668 | 239 | 12 | 1 | 612 | 278 | 920 | 0.0 | 663 |
Find 150 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCCTTCCTTTGATTATA+TGG | 0.144093 | 1.1:+25683409 | MS.gene65451:CDS |
| GATATTCAAGATAAGATTTC+TGG | 0.145396 | 1.1:+25679760 | MS.gene65451:CDS |
| ATAATAATGGTCAGAATCTT+AGG | 0.168246 | 1.1:+25683360 | MS.gene65451:CDS |
| GAATTTCTTCTGATGTTATT+TGG | 0.185326 | 1.1:-25681757 | None:intergenic |
| AACAAGCAAGTTGGTGTTAA+TGG | 0.205018 | 1.1:+25679826 | MS.gene65451:CDS |
| TGCAGCAGTTTCACAAGTTT+GGG | 0.255478 | 1.1:+25683244 | MS.gene65451:CDS |
| ATGCAGCAGTTTCACAAGTT+TGG | 0.261725 | 1.1:+25683243 | MS.gene65451:CDS |
| AATGCGAGTAGTTTGGTTAA+AGG | 0.279990 | 1.1:+25679880 | MS.gene65451:CDS |
| TGAAAGATGATGATGCATTA+AGG | 0.290977 | 1.1:+25683324 | MS.gene65451:CDS |
| ACAAGCAAGTTGGTGTTAAT+GGG | 0.297814 | 1.1:+25679827 | MS.gene65451:CDS |
| GCTTTGGTTTCTGTTCCTTT+TGG | 0.300813 | 1.1:+25682045 | MS.gene65451:CDS |
| GTCTAGAATCTGCTGATAAT+AGG | 0.312218 | 1.1:-25681792 | None:intergenic |
| TAATGCATCATCATCTTTCA+TGG | 0.325727 | 1.1:-25683321 | None:intergenic |
| TGTGCGTGTGCATTGGATTC+TGG | 0.328973 | 1.1:-25683218 | None:intergenic |
| TGGCCTTCCTTTGATTATAT+GGG | 0.341031 | 1.1:+25683410 | MS.gene65451:CDS |
| TTCACTTAGTCCTCAAGCTT+TGG | 0.370007 | 1.1:+25682029 | MS.gene65451:CDS |
| ACATTGACACCACCATGTTT+TGG | 0.370793 | 1.1:-25683059 | None:intergenic |
| GTCATGGGTGTGTGCGGTTT+AGG | 0.372652 | 1.1:+25683281 | MS.gene65451:CDS |
| AAGCTGTTCCATTGTCGAAT+TGG | 0.374183 | 1.1:-25681708 | None:intergenic |
| CACAGATTCTATCAACATAT+TGG | 0.375325 | 1.1:+25683001 | MS.gene65451:CDS |
| AACTTGCTTGTTATCATCTT+CGG | 0.385424 | 1.1:-25679815 | None:intergenic |
| GCCGATGAATGCGAGTAGTT+TGG | 0.385485 | 1.1:+25679873 | MS.gene65451:CDS |
| TTGGTCCTGATGACTTATAT+TGG | 0.385525 | 1.1:+25683390 | MS.gene65451:CDS |
| GAAAGATGATGATGCATTAA+GGG | 0.391493 | 1.1:+25683325 | MS.gene65451:CDS |
| TAGAGATAGGATAATGGTTA+AGG | 0.392030 | 1.1:+25679954 | MS.gene65451:CDS |
| GTTTATGATAATAATAATAA+TGG | 0.399127 | 1.1:+25683347 | MS.gene65451:CDS |
| CTGAGCTCGGTGGAGGGGTT+CGG | 0.400608 | 1.1:+25682109 | MS.gene65451:CDS |
| AGCTGAATGGGATAGGGAAC+AGG | 0.403079 | 1.1:+25680289 | MS.gene65451:CDS |
| TGCTGATAATAGGGTGGAAC+TGG | 0.403387 | 1.1:-25681782 | None:intergenic |
| CTTGAGGAGTTTGATGATCA+AGG | 0.407796 | 1.1:+25680192 | MS.gene65451:CDS |
| ATGCACCGCTTCCACTTCAA+TGG | 0.411690 | 1.1:+25683121 | MS.gene65451:CDS |
| TCTAGAATCTGCTGATAATA+GGG | 0.424508 | 1.1:-25681791 | None:intergenic |
| GCTGGTTGGTTTGTTTCTGA+AGG | 0.428070 | 1.1:+25680321 | MS.gene65451:CDS |
| AGCATGCAATACCTCAGAAT+TGG | 0.432345 | 1.1:-25680397 | None:intergenic |
| CTTCTGATGTTATTTGGTAA+AGG | 0.438611 | 1.1:-25681751 | None:intergenic |
| CAGGAGCTTCACCTAGCATA+TGG | 0.440207 | 1.1:+25681551 | MS.gene65451:CDS |
| GCAAAGCTTGGAGAAGGGAG+TGG | 0.441550 | 1.1:+25680060 | MS.gene65451:CDS |
| TGATGAAAATCCGATAGCTT+TGG | 0.443541 | 1.1:+25680029 | MS.gene65451:CDS |
| ATATTCAAGATAAGATTTCT+GGG | 0.446505 | 1.1:+25679761 | MS.gene65451:CDS |
| CTAGCATATGGAGAGATTGC+TGG | 0.447217 | 1.1:+25681563 | MS.gene65451:CDS |
| CGCGGCGATTCTGTCTTCGT+TGG | 0.448442 | 1.1:+25683098 | MS.gene65451:CDS |
| AAGCTGAATCCATTACTTTG+TGG | 0.450673 | 1.1:+25681998 | MS.gene65451:CDS |
| TCAAAAGTGTGATATTGATA+TGG | 0.452117 | 1.1:+25680149 | MS.gene65451:CDS |
| CTGGTTGGTTTGTTTCTGAA+GGG | 0.454495 | 1.1:+25680322 | MS.gene65451:CDS |
| GAAGGCCAATATAAGTCATC+AGG | 0.457783 | 1.1:-25683395 | None:intergenic |
| GTTGATTAGAGATAGGATAA+TGG | 0.462027 | 1.1:+25679948 | MS.gene65451:CDS |
| TGGTATCTTAAGACCAATGC+CGG | 0.467305 | 1.1:-25683039 | None:intergenic |
| ACAGGATTGCTGCGGCTGGT+TGG | 0.470699 | 1.1:+25680307 | MS.gene65451:CDS |
| AGCTGAATCCATTACTTTGT+GGG | 0.472042 | 1.1:+25681999 | MS.gene65451:CDS |
| AACTTTAAGCTGAATGGGAT+AGG | 0.477626 | 1.1:+25680282 | MS.gene65451:CDS |
| GGGTAATTCTGACTTTGTCA+TGG | 0.480274 | 1.1:+25683265 | MS.gene65451:CDS |
| TCAGAAGCCTGTTGTTGCTA+TGG | 0.484728 | 1.1:+25681924 | MS.gene65451:CDS |
| TCGGTGGAGGGGTTCGGAAG+AGG | 0.486329 | 1.1:+25682115 | MS.gene65451:CDS |
| ATTTACATCCCACAAAGTAA+TGG | 0.487368 | 1.1:-25682007 | None:intergenic |
| GCAGGCAACACAATGGAATC+CGG | 0.492406 | 1.1:+25681643 | MS.gene65451:CDS |
| TTGGACTTTCGCCAACCATC+CGG | 0.494054 | 1.1:+25683020 | MS.gene65451:CDS |
| TTTCGCCAACCATCCGGCAT+TGG | 0.494605 | 1.1:+25683026 | MS.gene65451:CDS |
| GGGGTTGAGAGAGGGAAGAG+TGG | 0.498567 | 1.1:+25680114 | MS.gene65451:CDS |
| AATAATACACAAGAGGAAGA+AGG | 0.498742 | 1.1:+25680228 | MS.gene65451:CDS |
| GAGTATTCCATAGCAACAAC+AGG | 0.498841 | 1.1:-25681931 | None:intergenic |
| TGCACCGCTTCCACTTCAAT+GGG | 0.503398 | 1.1:+25683122 | MS.gene65451:CDS |
| TGCAGCAACGACATATCTTC+CGG | 0.505531 | 1.1:-25681617 | None:intergenic |
| AGTGGGAAAGTTTCGAATCA+TGG | 0.507395 | 1.1:+25680078 | MS.gene65451:CDS |
| TAATAATGGTCAGAATCTTA+GGG | 0.507975 | 1.1:+25683361 | MS.gene65451:CDS |
| ACCAAACTACTCGCATTCAT+CGG | 0.512207 | 1.1:-25679874 | None:intergenic |
| ACTTTAAGCTGAATGGGATA+GGG | 0.512555 | 1.1:+25680283 | MS.gene65451:CDS |
| CCTCGATTTCTCCACTGCAA+AGG | 0.515233 | 1.1:-25681958 | None:intergenic |
| ACTGATGCTGAGCTCGGTGG+AGG | 0.515561 | 1.1:+25682102 | MS.gene65451:CDS |
| CAAGGTTCAGATGGTTGCTC+CGG | 0.516951 | 1.1:+25681598 | MS.gene65451:CDS |
| ACAAGGATGAGCTAGAAGAT+AGG | 0.524636 | 1.1:+25679908 | MS.gene65451:CDS |
| CAGAATCTTAGGGAAGTTGT+TGG | 0.525917 | 1.1:+25683371 | MS.gene65451:CDS |
| GGGAACAGGATTGCTGCGGC+TGG | 0.526089 | 1.1:+25680303 | MS.gene65451:CDS |
| TTGAGGAGTTTGATGATCAA+GGG | 0.526319 | 1.1:+25680193 | MS.gene65451:CDS |
| ATGGTGAGCAAGTCATGAGT+TGG | 0.526992 | 1.1:+25681896 | MS.gene65451:CDS |
| TGGTGAGCAAGTCATGAGTT+GGG | 0.528610 | 1.1:+25681897 | MS.gene65451:CDS |
| ATTAGATGCCTCCACATAGC+TGG | 0.531150 | 1.1:-25683464 | None:intergenic |
| TGCTGGCTAATTCGCGCTCA+AGG | 0.531576 | 1.1:+25681580 | MS.gene65451:CDS |
| TTCTGGGATTGAGAAAGCTA+TGG | 0.531919 | 1.1:+25679777 | MS.gene65451:CDS |
| GGTTAAGGATTCGACGGTGA+AGG | 0.532486 | 1.1:+25679969 | MS.gene65451:CDS |
| GGTAATTCTGACTTTGTCAT+GGG | 0.532909 | 1.1:+25683266 | MS.gene65451:CDS |
| ATCGTTTCCTTCAGCATCTG+AGG | 0.537265 | 1.1:-25682964 | None:intergenic |
| TAAGACCAATGCCGGATGGT+TGG | 0.539535 | 1.1:-25683031 | None:intergenic |
| TGATGCTGAGCTCGGTGGAG+GGG | 0.539606 | 1.1:+25682104 | MS.gene65451:CDS |
| TGCATAATGTGCGTGTGCAT+TGG | 0.539653 | 1.1:-25683225 | None:intergenic |
| CTAGGTGAAGCTCCTGGAGG+GGG | 0.546323 | 1.1:-25681544 | None:intergenic |
| TTTGCCCATTGAAGTGGAAG+CGG | 0.547122 | 1.1:-25683126 | None:intergenic |
| TATGTCGTTGCTGCATCCGC+AGG | 0.547513 | 1.1:+25681625 | MS.gene65451:CDS |
| ATTGGATTCTGGAAAAGTAT+AGG | 0.547801 | 1.1:-25683207 | None:intergenic |
| AAAATCCCAAGAACAAAAGC+CGG | 0.554722 | 1.1:-25681662 | None:intergenic |
| AATCATGGTGATCCTTGTGA+TGG | 0.554766 | 1.1:+25680093 | MS.gene65451:CDS |
| ATCGTAAGTTGATTAGAGAT+AGG | 0.555786 | 1.1:+25679941 | MS.gene65451:CDS |
| CAGCATCAGTATTACTCACA+TGG | 0.556164 | 1.1:-25682089 | None:intergenic |
| TGCTAGGTGAAGCTCCTGGA+GGG | 0.558715 | 1.1:-25681546 | None:intergenic |
| ATCATGGTGATCCTTGTGAT+GGG | 0.560210 | 1.1:+25680094 | MS.gene65451:CDS |
| TTATGATATTGCCAATTCTG+AGG | 0.561353 | 1.1:+25680386 | MS.gene65451:CDS |
| CTGATGCTGAGCTCGGTGGA+GGG | 0.562706 | 1.1:+25682103 | MS.gene65451:CDS |
| ACGAGATCCCATATAATCAA+AGG | 0.566955 | 1.1:-25683417 | None:intergenic |
| CAGCAATCTCTCCATATGCT+AGG | 0.569487 | 1.1:-25681562 | None:intergenic |
| CTTGTGATGGGGTTGAGAGA+GGG | 0.574339 | 1.1:+25680106 | MS.gene65451:CDS |
| ATAATACACAAGAGGAAGAA+GGG | 0.576913 | 1.1:+25680229 | MS.gene65451:CDS |
| CATATGCTAGGTGAAGCTCC+TGG | 0.579927 | 1.1:-25681550 | None:intergenic |
| CCTCTCTCAACCCCATCACA+AGG | 0.583757 | 1.1:-25680105 | None:intergenic |
| GAACAATAATAATACACAAG+AGG | 0.584555 | 1.1:+25680221 | MS.gene65451:CDS |
| GCTAGGTGAAGCTCCTGGAG+GGG | 0.584819 | 1.1:-25681545 | None:intergenic |
| GACTTTGTCATGGGTGTGTG+CGG | 0.585509 | 1.1:+25683275 | MS.gene65451:CDS |
| GATAATGGTTAAGGATTCGA+CGG | 0.585545 | 1.1:+25679963 | MS.gene65451:CDS |
| GTTAAGGATTCGACGGTGAA+GGG | 0.585630 | 1.1:+25679970 | MS.gene65451:CDS |
| TGGTTGGTTTGTTTCTGAAG+GGG | 0.588187 | 1.1:+25680323 | MS.gene65451:CDS |
| AGGTCGAAGTGCTGTTCTAG+AGG | 0.591590 | 1.1:-25681731 | None:intergenic |
| CAAGAGATCGACCAGCTATG+TGG | 0.592941 | 1.1:+25683453 | MS.gene65451:CDS |
| ATTCGCGCTCAAGGTTCAGA+TGG | 0.593453 | 1.1:+25681589 | MS.gene65451:CDS |
| CAAGCAAGTTGGTGTTAATG+GGG | 0.595316 | 1.1:+25679828 | MS.gene65451:CDS |
| CAAAGCTTGGAGAAGGGAGT+GGG | 0.597495 | 1.1:+25680061 | MS.gene65451:CDS |
| GAAGATGATAACAAGCAAGT+TGG | 0.597574 | 1.1:+25679817 | MS.gene65451:CDS |
| TTTGGTTAAAGGTTTGAACA+AGG | 0.599725 | 1.1:+25679891 | MS.gene65451:CDS |
| GGATTCGACGGTGAAGGGAA+AGG | 0.600551 | 1.1:+25679975 | MS.gene65451:CDS |
| AGTAATACTGATGCTGAGCT+CGG | 0.604573 | 1.1:+25682096 | MS.gene65451:CDS |
| AAAGCTTTCCAATTCGACAA+TGG | 0.607659 | 1.1:+25681700 | MS.gene65451:CDS |
| ATCTTAAGACCAATGCCGGA+TGG | 0.612717 | 1.1:-25683035 | None:intergenic |
| GTAAGCTCCTCAGATGCTGA+AGG | 0.619753 | 1.1:+25682957 | MS.gene65451:CDS |
| TTCGACGGTGAAGGGAAAGG+TGG | 0.623957 | 1.1:+25679978 | MS.gene65451:CDS |
| GATCCCATATAATCAAAGGA+AGG | 0.629205 | 1.1:-25683413 | None:intergenic |
| CCTTGTGATGGGGTTGAGAG+AGG | 0.636080 | 1.1:+25680105 | MS.gene65451:CDS |
| GCAGCAGTTTCACAAGTTTG+GGG | 0.641830 | 1.1:+25683245 | MS.gene65451:CDS |
| AGAATCTGCTGATAATAGGG+TGG | 0.650877 | 1.1:-25681788 | None:intergenic |
| TGATATTGATATGGTGCTTG+AGG | 0.653724 | 1.1:+25680158 | MS.gene65451:CDS |
| AATACTGATGCTGAGCTCGG+TGG | 0.657440 | 1.1:+25682099 | MS.gene65451:CDS |
| TCTCTAATCAACTTACGATG+AGG | 0.659412 | 1.1:-25679937 | None:intergenic |
| TATCAGCAGATTCTAGACAA+TGG | 0.659458 | 1.1:+25681797 | MS.gene65451:CDS |
| CCTTTGCAGTGGAGAAATCG+AGG | 0.667679 | 1.1:+25681958 | MS.gene65451:CDS |
| ATGCTAGGTGAAGCTCCTGG+AGG | 0.668637 | 1.1:-25681547 | None:intergenic |
| TCAGATGCTGAAGGAAACGA+TGG | 0.669483 | 1.1:+25682966 | MS.gene65451:CDS |
| CAGCAGATTCTAGACAATGG+TGG | 0.669584 | 1.1:+25681800 | MS.gene65451:CDS |
| GAAATAATGAGAGGTCCACA+TGG | 0.670913 | 1.1:-25681829 | None:intergenic |
| GAGATCGACCAGCTATGTGG+AGG | 0.672338 | 1.1:+25683456 | MS.gene65451:CDS |
| TGAGGCGGATGAGAAACTTG+AGG | 0.674861 | 1.1:+25680176 | MS.gene65451:CDS |
| TATTGATATGGTGCTTGAGG+CGG | 0.676053 | 1.1:+25680161 | MS.gene65451:CDS |
| GGATTCCATTGTGTTGCCTG+CGG | 0.676759 | 1.1:-25681641 | None:intergenic |
| CAATATGTTGATAGAATCTG+TGG | 0.677364 | 1.1:-25683000 | None:intergenic |
| AATACTCTAGTCCTTTGCAG+TGG | 0.679801 | 1.1:+25681947 | MS.gene65451:CDS |
| CTACATGTAGAAATAATGAG+AGG | 0.680866 | 1.1:-25681838 | None:intergenic |
| GGAACAGAAACCAAAGCTTG+AGG | 0.681880 | 1.1:-25682039 | None:intergenic |
| TGCATCCGCAGGCAACACAA+TGG | 0.685391 | 1.1:+25681636 | MS.gene65451:CDS |
| CAATGGTGGTATAAACCATG+TGG | 0.694373 | 1.1:+25681814 | MS.gene65451:CDS |
| TCATGGTGATCCTTGTGATG+GGG | 0.695128 | 1.1:+25680095 | MS.gene65451:CDS |
| GATAGGGAACAGGATTGCTG+CGG | 0.700919 | 1.1:+25680299 | MS.gene65451:CDS |
| GGTCTTAAGATACCAAAACA+TGG | 0.703850 | 1.1:+25683047 | MS.gene65451:CDS |
| TGAGCAAGTCATGAGTTGGG+AGG | 0.720703 | 1.1:+25681900 | MS.gene65451:CDS |
| CTTAAGATACCAAAACATGG+TGG | 0.729335 | 1.1:+25683050 | MS.gene65451:CDS |
| TCTACATGTAGCTCACAGAG+AGG | 0.729650 | 1.1:+25681850 | MS.gene65451:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATTAATAATATAAA+TGG | + | chr1.1:25681213-25681232 | MS.gene65451:intron | 0.0% |
| !! | GTTTATGATAATAATAATAA+TGG | + | chr1.1:25683347-25683366 | MS.gene65451:CDS | 10.0% |
| !!! | AACAATTTATGTATTTTAAA+AGG | + | chr1.1:25680867-25680886 | MS.gene65451:intron | 10.0% |
| !!! | GATATCTTTTTATTTAATTT+TGG | + | chr1.1:25680434-25680453 | MS.gene65451:intron | 10.0% |
| !! | AAACCAAATTAAAATCTAAA+TGG | - | chr1.1:25681385-25681404 | None:intergenic | 15.0% |
| !! | AACCAAATTAAAATCTAAAT+GGG | - | chr1.1:25681384-25681403 | None:intergenic | 15.0% |
| !! | AATATATTAATAAACTATCG+TGG | - | chr1.1:25681448-25681467 | None:intergenic | 15.0% |
| !! | ATTAATATGTTTAGAGAATA+TGG | + | chr1.1:25680781-25680800 | MS.gene65451:intron | 15.0% |
| !! | CACTTTAATTAATTATGTAA+TGG | - | chr1.1:25682622-25682641 | None:intergenic | 15.0% |
| !!! | ATATGCATAAATTTTGTTAA+TGG | - | chr1.1:25680835-25680854 | None:intergenic | 15.0% |
| !! | AAAATTCAATCTTTATCCAA+TGG | + | chr1.1:25680657-25680676 | MS.gene65451:intron | 20.0% |
| !! | AATATATGCATGATAATTGA+AGG | - | chr1.1:25682860-25682879 | None:intergenic | 20.0% |
| !! | ATAATATAAATGGACATTTG+AGG | + | chr1.1:25681223-25681242 | MS.gene65451:intron | 20.0% |
| !! | ATATTCAAGATAAGATTTCT+GGG | + | chr1.1:25679761-25679780 | MS.gene65451:CDS | 20.0% |
| !! | GAACAATCAATTCTTTATAA+GGG | - | chr1.1:25681178-25681197 | None:intergenic | 20.0% |
| !! | TGAACAATCAATTCTTTATA+AGG | - | chr1.1:25681179-25681198 | None:intergenic | 20.0% |
| !! | TTCTCTAAACATATTAATCT+CGG | - | chr1.1:25680779-25680798 | None:intergenic | 20.0% |
| !! | TTGGTTAAAATGTATGAAAA+TGG | - | chr1.1:25682914-25682933 | None:intergenic | 20.0% |
| !!! | TATGTGATCTTTAAGAATAA+AGG | + | chr1.1:25680515-25680534 | MS.gene65451:intron | 20.0% |
| ! | AAAAGATTTACCTACTATCA+AGG | - | chr1.1:25680729-25680748 | None:intergenic | 25.0% |
| ! | AAGAATTCAAGTCCAAAATT+TGG | - | chr1.1:25680542-25680561 | None:intergenic | 25.0% |
| ! | ACATAAATCATATCGAAAAG+CGG | - | chr1.1:25681420-25681439 | None:intergenic | 25.0% |
| ! | ATAATAATGGTCAGAATCTT+AGG | + | chr1.1:25683360-25683379 | MS.gene65451:CDS | 25.0% |
| ! | ATATACAGGTTTAAAAAGAC+AGG | - | chr1.1:25682227-25682246 | None:intergenic | 25.0% |
| ! | ATGAAGAGACATTAGATTAA+GGG | - | chr1.1:25681287-25681306 | None:intergenic | 25.0% |
| ! | ATGATGATTATTGTTGATCT+TGG | + | chr1.1:25680482-25680501 | MS.gene65451:intron | 25.0% |
| ! | CATCAACATTCACTTAAAAT+TGG | + | chr1.1:25680628-25680647 | MS.gene65451:intron | 25.0% |
| ! | CATCATTTACAACAAAATCA+AGG | - | chr1.1:25680465-25680484 | None:intergenic | 25.0% |
| ! | GAACAATAATAATACACAAG+AGG | + | chr1.1:25680221-25680240 | MS.gene65451:CDS | 25.0% |
| ! | GAATTTCTTCTGATGTTATT+TGG | - | chr1.1:25681760-25681779 | None:intergenic | 25.0% |
| ! | GATATTCAAGATAAGATTTC+TGG | + | chr1.1:25679760-25679779 | MS.gene65451:CDS | 25.0% |
| ! | TAATAATGGTCAGAATCTTA+GGG | + | chr1.1:25683361-25683380 | MS.gene65451:CDS | 25.0% |
| ! | TCAGGATGTAATATGAAATA+TGG | + | chr1.1:25681249-25681268 | MS.gene65451:intron | 25.0% |
| ! | TCTCTTCATCAAGATTATAA+GGG | + | chr1.1:25681298-25681317 | MS.gene65451:intron | 25.0% |
| ! | TTATAGATCAACTATCAACA+TGG | - | chr1.1:25682299-25682318 | None:intergenic | 25.0% |
| ! | TTGTAAACTTCTATTTCCAA+AGG | - | chr1.1:25682357-25682376 | None:intergenic | 25.0% |
| !! | AAGAATAAAGGACCAAATTT+TGG | + | chr1.1:25680527-25680546 | MS.gene65451:intron | 25.0% |
| !! | TCAAAAGTGTGATATTGATA+TGG | + | chr1.1:25680149-25680168 | MS.gene65451:CDS | 25.0% |
| !! | TGATACAACAATTTTCATTG+CGG | + | chr1.1:25683165-25683184 | MS.gene65451:CDS | 25.0% |
| !!! | AGGTTAGTTTGATTTAACAT+TGG | + | chr1.1:25682135-25682154 | MS.gene65451:intron | 25.0% |
| !!! | AGTATAACTTTTGATTCATC+AGG | - | chr1.1:25679736-25679755 | None:intergenic | 25.0% |
| !!! | ATTTAGGCAATTTTAACCAT+TGG | - | chr1.1:25680676-25680695 | None:intergenic | 25.0% |
| !!! | CTTTTAACTTTAAGCTGAAT+GGG | + | chr1.1:25680277-25680296 | MS.gene65451:CDS | 25.0% |
| !!! | GTATAACTTTTGATTCATCA+GGG | - | chr1.1:25679735-25679754 | None:intergenic | 25.0% |
| !!! | TGCCCATTTAGATTTTAATT+TGG | + | chr1.1:25681379-25681398 | MS.gene65451:intron | 25.0% |
| !!! | TTTTCTTTCTGAAATGAGTT+GGG | + | chr1.1:25680913-25680932 | MS.gene65451:intron | 25.0% |
| !!! | TTTTTCTTTCTGAAATGAGT+TGG | + | chr1.1:25680912-25680931 | MS.gene65451:intron | 25.0% |
| AATAATACACAAGAGGAAGA+AGG | + | chr1.1:25680228-25680247 | MS.gene65451:CDS | 30.0% | |
| ATAATACACAAGAGGAAGAA+GGG | + | chr1.1:25680229-25680248 | MS.gene65451:CDS | 30.0% | |
| ATAATACACAAGTTCTGTTG+TGG | + | chr1.1:25682272-25682291 | MS.gene65451:intron | 30.0% | |
| ATCACTCATAATTCCAACAT+CGG | + | chr1.1:25682331-25682350 | MS.gene65451:intron | 30.0% | |
| ATGCAAATCAAAAGATCAAC+CGG | - | chr1.1:25681004-25681023 | None:intergenic | 30.0% | |
| ATGCATGATAATTGAAGGTT+TGG | - | chr1.1:25682855-25682874 | None:intergenic | 30.0% | |
| ATTTACATCCCACAAAGTAA+TGG | - | chr1.1:25682010-25682029 | None:intergenic | 30.0% | |
| CACAGATTCTATCAACATAT+TGG | + | chr1.1:25683001-25683020 | MS.gene65451:CDS | 30.0% | |
| CACTCGTCTCAATATTAATT+TGG | - | chr1.1:25681145-25681164 | None:intergenic | 30.0% | |
| CTACATGTAGAAATAATGAG+AGG | - | chr1.1:25681841-25681860 | None:intergenic | 30.0% | |
| GATGAAGAGACATTAGATTA+AGG | - | chr1.1:25681288-25681307 | None:intergenic | 30.0% | |
| GATTTGCATGCTAAATATTG+AGG | + | chr1.1:25681015-25681034 | MS.gene65451:intron | 30.0% | |
| GGCTTATATTTGAAGAGTTT+AGG | + | chr1.1:25680807-25680826 | MS.gene65451:intron | 30.0% | |
| GTCTCTTCATCAAGATTATA+AGG | + | chr1.1:25681297-25681316 | MS.gene65451:intron | 30.0% | |
| GTTGATTAGAGATAGGATAA+TGG | + | chr1.1:25679948-25679967 | MS.gene65451:CDS | 30.0% | |
| TAAAAATTCGTCATGCTTTC+AGG | + | chr1.1:25681504-25681523 | MS.gene65451:intron | 30.0% | |
| TAATGCATCATCATCTTTCA+TGG | - | chr1.1:25683324-25683343 | None:intergenic | 30.0% | |
| TACCTACTATCAAGGATTAA+AGG | - | chr1.1:25680721-25680740 | None:intergenic | 30.0% | |
| TAGTTGTGTAAAAGCAACTT+TGG | + | chr1.1:25682246-25682265 | MS.gene65451:intron | 30.0% | |
| TATGTTTAGAGAATATGGCA+TGG | + | chr1.1:25680786-25680805 | MS.gene65451:intron | 30.0% | |
| TCTTGACACTGCATAAAAAT+TGG | + | chr1.1:25680584-25680603 | MS.gene65451:intron | 30.0% | |
| TTATGATATTGCCAATTCTG+AGG | + | chr1.1:25680386-25680405 | MS.gene65451:CDS | 30.0% | |
| TTTGGTTAAAGGTTTGAACA+AGG | + | chr1.1:25679891-25679910 | MS.gene65451:CDS | 30.0% | |
| ! | ATAGTAGGTAAATCTTTTCC+TGG | + | chr1.1:25680731-25680750 | MS.gene65451:intron | 30.0% |
| ! | ATTGGATTCTGGAAAAGTAT+AGG | - | chr1.1:25683210-25683229 | None:intergenic | 30.0% |
| ! | CAATATGTTGATAGAATCTG+TGG | - | chr1.1:25683003-25683022 | None:intergenic | 30.0% |
| ! | CATGTTCTTCTGGAAAATTT+AGG | - | chr1.1:25680692-25680711 | None:intergenic | 30.0% |
| ! | CTTCTGATGTTATTTGGTAA+AGG | - | chr1.1:25681754-25681773 | None:intergenic | 30.0% |
| ! | GAAAGATGATGATGCATTAA+GGG | + | chr1.1:25683325-25683344 | MS.gene65451:CDS | 30.0% |
| ! | GAAATTTTCTTACCACCAAA+AGG | - | chr1.1:25682063-25682082 | None:intergenic | 30.0% |
| ! | GCTTTTACACAACTATATAC+AGG | - | chr1.1:25682241-25682260 | None:intergenic | 30.0% |
| ! | TAGAGATAGGATAATGGTTA+AGG | + | chr1.1:25679954-25679973 | MS.gene65451:CDS | 30.0% |
| ! | TCTAGAATCTGCTGATAATA+GGG | - | chr1.1:25681794-25681813 | None:intergenic | 30.0% |
| ! | TGAAAGATGATGATGCATTA+AGG | + | chr1.1:25683324-25683343 | MS.gene65451:CDS | 30.0% |
| !! | AACTTGCTTGTTATCATCTT+CGG | - | chr1.1:25679818-25679837 | None:intergenic | 30.0% |
| !! | ATCGTAAGTTGATTAGAGAT+AGG | + | chr1.1:25679941-25679960 | MS.gene65451:CDS | 30.0% |
| !! | ATTTAAGTTGTGATTCACAC+TGG | + | chr1.1:25682582-25682601 | MS.gene65451:intron | 30.0% |
| !! | CATACATTTTAACCAACCTT+TGG | + | chr1.1:25682918-25682937 | MS.gene65451:intron | 30.0% |
| !!! | AAGCATGACGAATTTTTAGT+TGG | - | chr1.1:25681502-25681521 | None:intergenic | 30.0% |
| !!! | GCTTTTAACTTTAAGCTGAA+TGG | + | chr1.1:25680276-25680295 | MS.gene65451:CDS | 30.0% |
| AAAATCCCAAGAACAAAAGC+CGG | - | chr1.1:25681665-25681684 | None:intergenic | 35.0% | |
| AAAGCTTTCCAATTCGACAA+TGG | + | chr1.1:25681700-25681719 | MS.gene65451:CDS | 35.0% | |
| AACTTTAAGCTGAATGGGAT+AGG | + | chr1.1:25680282-25680301 | MS.gene65451:CDS | 35.0% | |
| AAGCTGAATCCATTACTTTG+TGG | + | chr1.1:25681998-25682017 | MS.gene65451:CDS | 35.0% | |
| AAGGCAATAACATGTTCTTC+TGG | - | chr1.1:25680702-25680721 | None:intergenic | 35.0% | |
| AATGCGAGTAGTTTGGTTAA+AGG | + | chr1.1:25679880-25679899 | MS.gene65451:CDS | 35.0% | |
| ACGAGATCCCATATAATCAA+AGG | - | chr1.1:25683420-25683439 | None:intergenic | 35.0% | |
| ACTTTAAGCTGAATGGGATA+GGG | + | chr1.1:25680283-25680302 | MS.gene65451:CDS | 35.0% | |
| AGCTGAATCCATTACTTTGT+GGG | + | chr1.1:25681999-25682018 | MS.gene65451:CDS | 35.0% | |
| ATGACACCGAACTTAATAAC+AGG | - | chr1.1:25680981-25681000 | None:intergenic | 35.0% | |
| CATCATCATAATCCAAAGGT+TGG | - | chr1.1:25682933-25682952 | None:intergenic | 35.0% | |
| CATGCTAAATATTGAGGCAA+GGG | + | chr1.1:25681021-25681040 | MS.gene65451:intron | 35.0% | |
| CATTCAAAAGTAGAAGCTCA+AGG | - | chr1.1:25682529-25682548 | None:intergenic | 35.0% | |
| CGGTATGATCAATGATACTT+AGG | - | chr1.1:25680759-25680778 | None:intergenic | 35.0% | |
| CTCTTCTTGCAGACTTAAAA+TGG | - | chr1.1:25681054-25681073 | None:intergenic | 35.0% | |
| CTTAAGATACCAAAACATGG+TGG | + | chr1.1:25683050-25683069 | MS.gene65451:CDS | 35.0% | |
| GAAGATGATAACAAGCAAGT+TGG | + | chr1.1:25679817-25679836 | MS.gene65451:CDS | 35.0% | |
| GATCCCATATAATCAAAGGA+AGG | - | chr1.1:25683416-25683435 | None:intergenic | 35.0% | |
| GGTAATTCTGACTTTGTCAT+GGG | + | chr1.1:25683266-25683285 | MS.gene65451:CDS | 35.0% | |
| GGTCTTAAGATACCAAAACA+TGG | + | chr1.1:25683047-25683066 | MS.gene65451:CDS | 35.0% | |
| TATCAGCAGATTCTAGACAA+TGG | + | chr1.1:25681797-25681816 | MS.gene65451:CDS | 35.0% | |
| TCAACCCCTGTTATTAAGTT+CGG | + | chr1.1:25680972-25680991 | MS.gene65451:intron | 35.0% | |
| TCTCTAATCAACTTACGATG+AGG | - | chr1.1:25679940-25679959 | None:intergenic | 35.0% | |
| TCTCTGTACAATTATATGCC+AGG | + | chr1.1:25681355-25681374 | MS.gene65451:intron | 35.0% | |
| TCTGCATCATCATAATCCAA+AGG | - | chr1.1:25682937-25682956 | None:intergenic | 35.0% | |
| TGACACCGAACTTAATAACA+GGG | - | chr1.1:25680980-25680999 | None:intergenic | 35.0% | |
| TGATAATTGAAGGTTTGGCT+TGG | - | chr1.1:25682850-25682869 | None:intergenic | 35.0% | |
| TGATATTGATATGGTGCTTG+AGG | + | chr1.1:25680158-25680177 | MS.gene65451:CDS | 35.0% | |
| TGATGAAAATCCGATAGCTT+TGG | + | chr1.1:25680029-25680048 | MS.gene65451:CDS | 35.0% | |
| TGGCCTTCCTTTGATTATAT+GGG | + | chr1.1:25683410-25683429 | MS.gene65451:CDS | 35.0% | |
| TTGGTCCTGATGACTTATAT+TGG | + | chr1.1:25683390-25683409 | MS.gene65451:CDS | 35.0% | |
| ! | AGATTATAAGGGCATGAACT+TGG | + | chr1.1:25681309-25681328 | MS.gene65451:intron | 35.0% |
| ! | ATTTGTCGTCATCAGTGTTT+TGG | + | chr1.1:25682554-25682573 | MS.gene65451:intron | 35.0% |
| ! | GATAATGGTTAAGGATTCGA+CGG | + | chr1.1:25679963-25679982 | MS.gene65451:CDS | 35.0% |
| ! | GTACAATCTATTTTCTCTCG+CGG | + | chr1.1:25683080-25683099 | MS.gene65451:CDS | 35.0% |
| ! | GTCTAGAATCTGCTGATAAT+AGG | - | chr1.1:25681795-25681814 | None:intergenic | 35.0% |
| ! | TGCCTTTAATCCTTGATAGT+AGG | + | chr1.1:25680716-25680735 | MS.gene65451:intron | 35.0% |
| ! | TTGAGGAGTTTGATGATCAA+GGG | + | chr1.1:25680193-25680212 | MS.gene65451:CDS | 35.0% |
| ! | TTGGCCTTCCTTTGATTATA+TGG | + | chr1.1:25683409-25683428 | MS.gene65451:CDS | 35.0% |
| !! | AACAAGCAAGTTGGTGTTAA+TGG | + | chr1.1:25679826-25679845 | MS.gene65451:CDS | 35.0% |
| !! | ACAAGCAAGTTGGTGTTAAT+GGG | + | chr1.1:25679827-25679846 | MS.gene65451:CDS | 35.0% |
| !! | AGATCACTGTTTCTGTAGTA+AGG | + | chr1.1:25682493-25682512 | MS.gene65451:intron | 35.0% |
| !! | CTTGAGCTTCTACTTTTGAA+TGG | + | chr1.1:25682527-25682546 | MS.gene65451:intron | 35.0% |
| !! | TTATTAAGTTCGGTGTCATC+CGG | + | chr1.1:25680982-25681001 | MS.gene65451:intron | 35.0% |
| !!! | CAAATGAGTTGAGTTTTGAG+AGG | - | chr1.1:25682444-25682463 | None:intergenic | 35.0% |
| AAGCTGTTCCATTGTCGAAT+TGG | - | chr1.1:25681711-25681730 | None:intergenic | 40.0% | |
| AATACTCTAGTCCTTTGCAG+TGG | + | chr1.1:25681947-25681966 | MS.gene65451:CDS | 40.0% | |
| AATCATGGTGATCCTTGTGA+TGG | + | chr1.1:25680093-25680112 | MS.gene65451:CDS | 40.0% | |
| AATGGACATTTGAGGATGTC+AGG | + | chr1.1:25681231-25681250 | MS.gene65451:intron | 40.0% | |
| ACAAGGATGAGCTAGAAGAT+AGG | + | chr1.1:25679908-25679927 | MS.gene65451:CDS | 40.0% | |
| ACCAAACTACTCGCATTCAT+CGG | - | chr1.1:25679877-25679896 | None:intergenic | 40.0% | |
| AGAATCTGCTGATAATAGGG+TGG | - | chr1.1:25681791-25681810 | None:intergenic | 40.0% | |
| AGCATGCAATACCTCAGAAT+TGG | - | chr1.1:25680400-25680419 | None:intergenic | 40.0% | |
| AGTAATACTGATGCTGAGCT+CGG | + | chr1.1:25682096-25682115 | MS.gene65451:CDS | 40.0% | |
| AGTGGGAAAGTTTCGAATCA+TGG | + | chr1.1:25680078-25680097 | MS.gene65451:CDS | 40.0% | |
| ATAATTCCAACATCGGCCTT+TGG | + | chr1.1:25682338-25682357 | MS.gene65451:intron | 40.0% | |
| ATCAATGATACTTAGGAGCC+AGG | - | chr1.1:25680752-25680771 | None:intergenic | 40.0% | |
| ATCATGGTGATCCTTGTGAT+GGG | + | chr1.1:25680094-25680113 | MS.gene65451:CDS | 40.0% | |
| ATGCAGCAGTTTCACAAGTT+TGG | + | chr1.1:25683243-25683262 | MS.gene65451:CDS | 40.0% | |
| CAATGGTGGTATAAACCATG+TGG | + | chr1.1:25681814-25681833 | MS.gene65451:CDS | 40.0% | |
| CAGAATCTTAGGGAAGTTGT+TGG | + | chr1.1:25683371-25683390 | MS.gene65451:CDS | 40.0% | |
| CAGCATCAGTATTACTCACA+TGG | - | chr1.1:25682092-25682111 | None:intergenic | 40.0% | |
| GAAATAATGAGAGGTCCACA+TGG | - | chr1.1:25681832-25681851 | None:intergenic | 40.0% | |
| GAAGGCCAATATAAGTCATC+AGG | - | chr1.1:25683398-25683417 | None:intergenic | 40.0% | |
| GACACCGAACTTAATAACAG+GGG | - | chr1.1:25680979-25680998 | None:intergenic | 40.0% | |
| GAGTATTCCATAGCAACAAC+AGG | - | chr1.1:25681934-25681953 | None:intergenic | 40.0% | |
| GCATGCTAAATATTGAGGCA+AGG | + | chr1.1:25681020-25681039 | MS.gene65451:intron | 40.0% | |
| GCCAAAAACTCCAAAGCTAT+CGG | - | chr1.1:25680042-25680061 | None:intergenic | 40.0% | |
| GGGTAATTCTGACTTTGTCA+TGG | + | chr1.1:25683265-25683284 | MS.gene65451:CDS | 40.0% | |
| TAAAATCTAAATGGGCAGCC+TGG | - | chr1.1:25681376-25681395 | None:intergenic | 40.0% | |
| TATTGATATGGTGCTTGAGG+CGG | + | chr1.1:25680161-25680180 | MS.gene65451:CDS | 40.0% | |
| TCATATGCATCCTCAAGATG+AGG | - | chr1.1:25681115-25681134 | None:intergenic | 40.0% | |
| TCGTCAACAAACAAGCAAGA+AGG | - | chr1.1:25682381-25682400 | None:intergenic | 40.0% | |
| TCTTGCAGACTTAAAATGGC+TGG | - | chr1.1:25681050-25681069 | None:intergenic | 40.0% | |
| TCTTTATATATTCCCCCTCC+AGG | + | chr1.1:25681532-25681551 | MS.gene65451:CDS | 40.0% | |
| TGCAGCAGTTTCACAAGTTT+GGG | + | chr1.1:25683244-25683263 | MS.gene65451:CDS | 40.0% | |
| TGGTATCTTAAGACCAATGC+CGG | - | chr1.1:25683042-25683061 | None:intergenic | 40.0% | |
| TTCACTTAGTCCTCAAGCTT+TGG | + | chr1.1:25682029-25682048 | MS.gene65451:CDS | 40.0% | |
| ! | AAAGTTTTCGATGTTCGCGA+TGG | + | chr1.1:25681877-25681896 | MS.gene65451:CDS | 40.0% |
| ! | ACATTGACACCACCATGTTT+TGG | - | chr1.1:25683062-25683081 | None:intergenic | 40.0% |
| ! | CTGAAATGAGTTGGGAGTTT+CGG | + | chr1.1:25680921-25680940 | MS.gene65451:intron | 40.0% |
| ! | CTTGAGGAGTTTGATGATCA+AGG | + | chr1.1:25680192-25680211 | MS.gene65451:CDS | 40.0% |
| ! | TGAAATGAGTTGGGAGTTTC+GGG | + | chr1.1:25680922-25680941 | MS.gene65451:intron | 40.0% |
| ! | TTGGTTTCTGTTCCTTTTGG+TGG | + | chr1.1:25682048-25682067 | MS.gene65451:CDS | 40.0% |
| ! | TTTTGGCAAAGCTTGGAGAA+GGG | + | chr1.1:25680055-25680074 | MS.gene65451:CDS | 40.0% |
| !! | CAAGCAAGTTGGTGTTAATG+GGG | + | chr1.1:25679828-25679847 | MS.gene65451:CDS | 40.0% |
| !! | CTGGTTGGTTTGTTTCTGAA+GGG | + | chr1.1:25680322-25680341 | MS.gene65451:CDS | 40.0% |
| !! | GCTTTGGTTTCTGTTCCTTT+TGG | + | chr1.1:25682045-25682064 | MS.gene65451:CDS | 40.0% |
| !! | TAATTGAAGGTTTGGCTTGG+TGG | - | chr1.1:25682847-25682866 | None:intergenic | 40.0% |
| !! | TGGTTGGTTTGTTTCTGAAG+GGG | + | chr1.1:25680323-25680342 | MS.gene65451:CDS | 40.0% |
| !! | TTCTGGGATTGAGAAAGCTA+TGG | + | chr1.1:25679777-25679796 | MS.gene65451:CDS | 40.0% |
| !! | TTTTTGGCAAAGCTTGGAGA+AGG | + | chr1.1:25680054-25680073 | MS.gene65451:CDS | 40.0% |
| !!! | TCCGATAGCTTTGGAGTTTT+TGG | + | chr1.1:25680038-25680057 | MS.gene65451:CDS | 40.0% |
| !!! | TTGGAGTTTTTGGCAAAGCT+TGG | + | chr1.1:25680048-25680067 | MS.gene65451:CDS | 40.0% |
| ATCGTTTCCTTCAGCATCTG+AGG | - | chr1.1:25682967-25682986 | None:intergenic | 45.0% | |
| ATCTTAAGACCAATGCCGGA+TGG | - | chr1.1:25683038-25683057 | None:intergenic | 45.0% | |
| ATGGTGAGCAAGTCATGAGT+TGG | + | chr1.1:25681896-25681915 | MS.gene65451:CDS | 45.0% | |
| ATTAGATGCCTCCACATAGC+TGG | - | chr1.1:25683467-25683486 | None:intergenic | 45.0% | |
| CAGCAATCTCTCCATATGCT+AGG | - | chr1.1:25681565-25681584 | None:intergenic | 45.0% | |
| CAGCAGATTCTAGACAATGG+TGG | + | chr1.1:25681800-25681819 | MS.gene65451:CDS | 45.0% | |
| CTAGCATATGGAGAGATTGC+TGG | + | chr1.1:25681563-25681582 | MS.gene65451:CDS | 45.0% | |
| CTATTTCCAAAGGCCGATGT+TGG | - | chr1.1:25682347-25682366 | None:intergenic | 45.0% | |
| GCAGCAGTTTCACAAGTTTG+GGG | + | chr1.1:25683245-25683264 | MS.gene65451:CDS | 45.0% | |
| GGAACAGAAACCAAAGCTTG+AGG | - | chr1.1:25682042-25682061 | None:intergenic | 45.0% | |
| GTTAAGGATTCGACGGTGAA+GGG | + | chr1.1:25679970-25679989 | MS.gene65451:CDS | 45.0% | |
| TCAGAAGCCTGTTGTTGCTA+TGG | + | chr1.1:25681924-25681943 | MS.gene65451:CDS | 45.0% | |
| TCAGATGCTGAAGGAAACGA+TGG | + | chr1.1:25682966-25682985 | MS.gene65451:CDS | 45.0% | |
| TCATGGTGATCCTTGTGATG+GGG | + | chr1.1:25680095-25680114 | MS.gene65451:CDS | 45.0% | |
| TCTACATGTAGCTCACAGAG+AGG | + | chr1.1:25681850-25681869 | MS.gene65451:CDS | 45.0% | |
| TGCAGCAACGACATATCTTC+CGG | - | chr1.1:25681620-25681639 | None:intergenic | 45.0% | |
| TGCATAATGTGCGTGTGCAT+TGG | - | chr1.1:25683228-25683247 | None:intergenic | 45.0% | |
| TGCTGATAATAGGGTGGAAC+TGG | - | chr1.1:25681785-25681804 | None:intergenic | 45.0% | |
| TGGTGAGCAAGTCATGAGTT+GGG | + | chr1.1:25681897-25681916 | MS.gene65451:CDS | 45.0% | |
| TTTGCCCATTGAAGTGGAAG+CGG | - | chr1.1:25683129-25683148 | None:intergenic | 45.0% | |
| ! | CTGTCTTTTGCCCATTGAAG+TGG | - | chr1.1:25683135-25683154 | None:intergenic | 45.0% |
| ! | GGAATCCGGCTTTTGTTCTT+GGG | + | chr1.1:25681657-25681676 | MS.gene65451:CDS | 45.0% |
| ! | TGGAATCCGGCTTTTGTTCT+TGG | + | chr1.1:25681656-25681675 | MS.gene65451:CDS | 45.0% |
| !! | GCTGGTTGGTTTGTTTCTGA+AGG | + | chr1.1:25680321-25680340 | MS.gene65451:CDS | 45.0% |
| AATACTGATGCTGAGCTCGG+TGG | + | chr1.1:25682099-25682118 | MS.gene65451:CDS | 50.0% | |
| AGCTGAATGGGATAGGGAAC+AGG | + | chr1.1:25680289-25680308 | MS.gene65451:CDS | 50.0% | |
| ATCCTCAAGATGAGGCAAGC+TGG | - | chr1.1:25681107-25681126 | None:intergenic | 50.0% | |
| ATGCACCGCTTCCACTTCAA+TGG | + | chr1.1:25683121-25683140 | MS.gene65451:CDS | 50.0% | |
| ATTCGCGCTCAAGGTTCAGA+TGG | + | chr1.1:25681589-25681608 | MS.gene65451:CDS | 50.0% | |
| CAAAGCTTGGAGAAGGGAGT+GGG | + | chr1.1:25680061-25680080 | MS.gene65451:CDS | 50.0% | |
| CAAGAGATCGACCAGCTATG+TGG | + | chr1.1:25683453-25683472 | MS.gene65451:CDS | 50.0% | |
| CAAGGTTCAGATGGTTGCTC+CGG | + | chr1.1:25681598-25681617 | MS.gene65451:CDS | 50.0% | |
| CAGGAGCTTCACCTAGCATA+TGG | + | chr1.1:25681551-25681570 | MS.gene65451:CDS | 50.0% | |
| CATATGCTAGGTGAAGCTCC+TGG | - | chr1.1:25681553-25681572 | None:intergenic | 50.0% | |
| CCTCGATTTCTCCACTGCAA+AGG | - | chr1.1:25681961-25681980 | None:intergenic | 50.0% | |
| CCTTTGCAGTGGAGAAATCG+AGG | + | chr1.1:25681958-25681977 | MS.gene65451:CDS | 50.0% | |
| GACTTTGTCATGGGTGTGTG+CGG | + | chr1.1:25683275-25683294 | MS.gene65451:CDS | 50.0% | |
| GATAGGGAACAGGATTGCTG+CGG | + | chr1.1:25680299-25680318 | MS.gene65451:CDS | 50.0% | |
| GCAGGCAACACAATGGAATC+CGG | + | chr1.1:25681643-25681662 | MS.gene65451:CDS | 50.0% | |
| GCCGATGAATGCGAGTAGTT+TGG | + | chr1.1:25679873-25679892 | MS.gene65451:CDS | 50.0% | |
| GGATTCCATTGTGTTGCCTG+CGG | - | chr1.1:25681644-25681663 | None:intergenic | 50.0% | |
| GGTTAAGGATTCGACGGTGA+AGG | + | chr1.1:25679969-25679988 | MS.gene65451:CDS | 50.0% | |
| GTAAGCTCCTCAGATGCTGA+AGG | + | chr1.1:25682957-25682976 | MS.gene65451:CDS | 50.0% | |
| TAAGACCAATGCCGGATGGT+TGG | - | chr1.1:25683034-25683053 | None:intergenic | 50.0% | |
| TACCAGCTTGCCTCATCTTG+AGG | + | chr1.1:25681102-25681121 | MS.gene65451:intron | 50.0% | |
| TGAGGCGGATGAGAAACTTG+AGG | + | chr1.1:25680176-25680195 | MS.gene65451:CDS | 50.0% | |
| TGCACCGCTTCCACTTCAAT+GGG | + | chr1.1:25683122-25683141 | MS.gene65451:CDS | 50.0% | |
| TGTGCGTGTGCATTGGATTC+TGG | - | chr1.1:25683221-25683240 | None:intergenic | 50.0% | |
| TTGGACTTTCGCCAACCATC+CGG | + | chr1.1:25683020-25683039 | MS.gene65451:CDS | 50.0% | |
| ! | CTTGTGATGGGGTTGAGAGA+GGG | + | chr1.1:25680106-25680125 | MS.gene65451:CDS | 50.0% |
| ! | TGAGCAAGTCATGAGTTGGG+AGG | + | chr1.1:25681900-25681919 | MS.gene65451:CDS | 50.0% |
| !! | AGGTCGAAGTGCTGTTCTAG+AGG | - | chr1.1:25681734-25681753 | None:intergenic | 50.0% |
| ATGCTAGGTGAAGCTCCTGG+AGG | - | chr1.1:25681550-25681569 | None:intergenic | 55.0% | |
| CCTCTCTCAACCCCATCACA+AGG | - | chr1.1:25680108-25680127 | None:intergenic | 55.0% | |
| GAGATCGACCAGCTATGTGG+AGG | + | chr1.1:25683456-25683475 | MS.gene65451:CDS | 55.0% | |
| GCAAAGCTTGGAGAAGGGAG+TGG | + | chr1.1:25680060-25680079 | MS.gene65451:CDS | 55.0% | |
| GGATTCGACGGTGAAGGGAA+AGG | + | chr1.1:25679975-25679994 | MS.gene65451:CDS | 55.0% | |
| GTCATGGGTGTGTGCGGTTT+AGG | + | chr1.1:25683281-25683300 | MS.gene65451:CDS | 55.0% | |
| TATGTCGTTGCTGCATCCGC+AGG | + | chr1.1:25681625-25681644 | MS.gene65451:CDS | 55.0% | |
| TGCATCCGCAGGCAACACAA+TGG | + | chr1.1:25681636-25681655 | MS.gene65451:CDS | 55.0% | |
| TGCTAGGTGAAGCTCCTGGA+GGG | - | chr1.1:25681549-25681568 | None:intergenic | 55.0% | |
| TTCGACGGTGAAGGGAAAGG+TGG | + | chr1.1:25679978-25679997 | MS.gene65451:CDS | 55.0% | |
| TTTCGCCAACCATCCGGCAT+TGG | + | chr1.1:25683026-25683045 | MS.gene65451:CDS | 55.0% | |
| ! | CCTTGTGATGGGGTTGAGAG+AGG | + | chr1.1:25680105-25680124 | MS.gene65451:CDS | 55.0% |
| ! | TGCTGGCTAATTCGCGCTCA+AGG | + | chr1.1:25681580-25681599 | MS.gene65451:CDS | 55.0% |
| ACAGGATTGCTGCGGCTGGT+TGG | + | chr1.1:25680307-25680326 | MS.gene65451:CDS | 60.0% | |
| CGCGGCGATTCTGTCTTCGT+TGG | + | chr1.1:25683098-25683117 | MS.gene65451:CDS | 60.0% | |
| CTAGGTGAAGCTCCTGGAGG+GGG | - | chr1.1:25681547-25681566 | None:intergenic | 60.0% | |
| GCTAGGTGAAGCTCCTGGAG+GGG | - | chr1.1:25681548-25681567 | None:intergenic | 60.0% | |
| GGGGTTGAGAGAGGGAAGAG+TGG | + | chr1.1:25680114-25680133 | MS.gene65451:CDS | 60.0% | |
| ! | ACTGATGCTGAGCTCGGTGG+AGG | + | chr1.1:25682102-25682121 | MS.gene65451:CDS | 60.0% |
| ! | CTGATGCTGAGCTCGGTGGA+GGG | + | chr1.1:25682103-25682122 | MS.gene65451:CDS | 60.0% |
| ! | TGATGCTGAGCTCGGTGGAG+GGG | + | chr1.1:25682104-25682123 | MS.gene65451:CDS | 60.0% |
| GGGAACAGGATTGCTGCGGC+TGG | + | chr1.1:25680303-25680322 | MS.gene65451:CDS | 65.0% | |
| TCGGTGGAGGGGTTCGGAAG+AGG | + | chr1.1:25682115-25682134 | MS.gene65451:CDS | 65.0% | |
| ! | CTGAGCTCGGTGGAGGGGTT+CGG | + | chr1.1:25682109-25682128 | MS.gene65451:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 25679715 | 25683493 | 25679715 | ID=MS.gene65451 |
| chr1.1 | mRNA | 25679715 | 25683493 | 25679715 | ID=MS.gene65451.t1;Parent=MS.gene65451 |
| chr1.1 | exon | 25679715 | 25680407 | 25679715 | ID=MS.gene65451.t1.exon1;Parent=MS.gene65451.t1 |
| chr1.1 | CDS | 25679715 | 25680407 | 25679715 | ID=cds.MS.gene65451.t1;Parent=MS.gene65451.t1 |
| chr1.1 | exon | 25681526 | 25682136 | 25681526 | ID=MS.gene65451.t1.exon2;Parent=MS.gene65451.t1 |
| chr1.1 | CDS | 25681526 | 25682136 | 25681526 | ID=cds.MS.gene65451.t1;Parent=MS.gene65451.t1 |
| chr1.1 | exon | 25682956 | 25683493 | 25682956 | ID=MS.gene65451.t1.exon3;Parent=MS.gene65451.t1 |
| chr1.1 | CDS | 25682956 | 25683493 | 25682956 | ID=cds.MS.gene65451.t1;Parent=MS.gene65451.t1 |
| Gene Sequence |
| Protein sequence |
