Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66043.t1 | XP_003622996.1 | 98.4 | 444 | 6 | 1 | 1 | 443 | 1 | 444 | 3.80E-258 | 900.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66043.t1 | Q9M8Z8 | 81.6 | 385 | 71 | 0 | 59 | 443 | 32 | 416 | 4.4e-194 | 678.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66043.t1 | G7L2D3 | 98.4 | 444 | 6 | 1 | 1 | 443 | 1 | 444 | 2.8e-258 | 900.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene66043 | 0.813416 | 2.59E-51 | -1.69E-46 |
MS.gene051914 | MS.gene66043 | 0.825692 | 4.08E-54 | -1.69E-46 |
MS.gene052169 | MS.gene66043 | 0.856787 | 2.54E-62 | -1.69E-46 |
MS.gene052308 | MS.gene66043 | 0.836288 | 1.02E-56 | -1.69E-46 |
MS.gene053108 | MS.gene66043 | 0.81917 | 1.34E-52 | -1.69E-46 |
MS.gene053173 | MS.gene66043 | 0.816154 | 6.40E-52 | -1.69E-46 |
MS.gene054551 | MS.gene66043 | 0.809509 | 1.83E-50 | -1.69E-46 |
MS.gene054593 | MS.gene66043 | 0.807309 | 5.38E-50 | -1.69E-46 |
MS.gene054633 | MS.gene66043 | 0.812389 | 4.35E-51 | -1.69E-46 |
MS.gene054662 | MS.gene66043 | 0.856548 | 2.99E-62 | -1.69E-46 |
MS.gene054941 | MS.gene66043 | 0.825108 | 5.61E-54 | -1.69E-46 |
MS.gene055308 | MS.gene66043 | 0.812739 | 3.64E-51 | -1.69E-46 |
MS.gene055578 | MS.gene66043 | 0.808785 | 2.61E-50 | -1.69E-46 |
MS.gene05640 | MS.gene66043 | 0.832362 | 9.87E-56 | -1.69E-46 |
MS.gene05652 | MS.gene66043 | 0.861401 | 1.05E-63 | -1.69E-46 |
MS.gene05732 | MS.gene66043 | 0.805974 | 1.03E-49 | -1.69E-46 |
MS.gene057367 | MS.gene66043 | 0.804619 | 1.98E-49 | -1.69E-46 |
MS.gene057669 | MS.gene66043 | 0.868359 | 6.93E-66 | -1.69E-46 |
MS.gene058128 | MS.gene66043 | 0.833111 | 6.43E-56 | -1.69E-46 |
MS.gene058776 | MS.gene66043 | 0.802956 | 4.39E-49 | -1.69E-46 |
MS.gene058853 | MS.gene66043 | 0.833144 | 6.31E-56 | -1.69E-46 |
MS.gene05926 | MS.gene66043 | 0.843567 | 1.29E-58 | -1.69E-46 |
MS.gene05960 | MS.gene66043 | 0.855436 | 6.32E-62 | -1.69E-46 |
MS.gene059616 | MS.gene66043 | 0.851429 | 8.93E-61 | -1.69E-46 |
MS.gene060291 | MS.gene66043 | 0.82265 | 2.12E-53 | -1.69E-46 |
MS.gene06093 | MS.gene66043 | 0.853622 | 2.12E-61 | -1.69E-46 |
MS.gene060985 | MS.gene66043 | 0.807405 | 5.14E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66043.t1 | MTR_7g059290 | 98.423 | 444 | 6 | 1 | 1 | 443 | 1 | 444 | 0.0 | 912 |
MS.gene66043.t1 | MTR_1g047370 | 76.009 | 446 | 99 | 5 | 6 | 443 | 5 | 450 | 0.0 | 687 |
MS.gene66043.t1 | MTR_4g104320 | 71.466 | 382 | 108 | 1 | 63 | 443 | 26 | 407 | 0.0 | 580 |
MS.gene66043.t1 | MTR_6g021950 | 65.544 | 386 | 133 | 0 | 58 | 443 | 19 | 404 | 0.0 | 562 |
MS.gene66043.t1 | MTR_3g075320 | 70.207 | 386 | 115 | 0 | 58 | 443 | 21 | 406 | 0.0 | 556 |
MS.gene66043.t1 | MTR_3g086310 | 68.912 | 386 | 117 | 2 | 58 | 443 | 21 | 403 | 0.0 | 530 |
MS.gene66043.t1 | MTR_1g111590 | 61.804 | 377 | 141 | 1 | 61 | 434 | 30 | 406 | 2.91e-177 | 502 |
MS.gene66043.t1 | MTR_3g086320 | 63.117 | 385 | 139 | 3 | 61 | 443 | 23 | 406 | 1.97e-176 | 499 |
MS.gene66043.t1 | MTR_1g062930 | 60.209 | 382 | 145 | 1 | 65 | 439 | 34 | 415 | 1.37e-174 | 497 |
MS.gene66043.t1 | MTR_7g102940 | 63.298 | 376 | 137 | 1 | 65 | 439 | 35 | 410 | 1.50e-173 | 494 |
MS.gene66043.t1 | MTR_4g107870 | 54.569 | 394 | 170 | 4 | 57 | 443 | 43 | 434 | 6.69e-157 | 451 |
MS.gene66043.t1 | MTR_5g038510 | 58.592 | 355 | 146 | 1 | 90 | 443 | 95 | 449 | 1.35e-147 | 428 |
MS.gene66043.t1 | MTR_8g468980 | 55.525 | 362 | 153 | 2 | 90 | 443 | 94 | 455 | 8.75e-145 | 421 |
MS.gene66043.t1 | MTR_2g023990 | 55.714 | 350 | 151 | 3 | 95 | 443 | 63 | 409 | 2.31e-142 | 413 |
MS.gene66043.t1 | MTR_5g038490 | 58.757 | 354 | 145 | 1 | 91 | 443 | 96 | 449 | 6.10e-142 | 413 |
MS.gene66043.t1 | MTR_4g132460 | 57.143 | 350 | 146 | 3 | 95 | 443 | 39 | 385 | 8.18e-142 | 410 |
MS.gene66043.t1 | MTR_6g011420 | 56.497 | 354 | 153 | 1 | 91 | 443 | 100 | 453 | 3.20e-141 | 412 |
MS.gene66043.t1 | MTR_7g009390 | 49.015 | 457 | 196 | 6 | 9 | 443 | 10 | 451 | 1.47e-139 | 407 |
MS.gene66043.t1 | MTR_3g075320 | 70.412 | 267 | 79 | 0 | 58 | 324 | 21 | 287 | 5.88e-139 | 400 |
MS.gene66043.t1 | MTR_8g078390 | 44.789 | 355 | 186 | 7 | 95 | 443 | 42 | 392 | 7.54e-100 | 304 |
MS.gene66043.t1 | MTR_8g078310 | 44.225 | 355 | 188 | 7 | 95 | 443 | 42 | 392 | 7.71e-100 | 304 |
MS.gene66043.t1 | MTR_3g030900 | 44.225 | 355 | 188 | 7 | 95 | 443 | 23 | 373 | 2.82e-99 | 301 |
MS.gene66043.t1 | MTR_8g078280 | 43.380 | 355 | 191 | 7 | 95 | 443 | 42 | 392 | 5.15e-96 | 294 |
MS.gene66043.t1 | MTR_8g078350 | 45.070 | 355 | 185 | 7 | 95 | 443 | 42 | 392 | 1.32e-93 | 288 |
MS.gene66043.t1 | MTR_4g064420 | 43.266 | 349 | 175 | 7 | 95 | 439 | 42 | 371 | 1.52e-91 | 283 |
MS.gene66043.t1 | MTR_5g019160 | 44.789 | 355 | 186 | 7 | 95 | 443 | 41 | 391 | 2.82e-89 | 276 |
MS.gene66043.t1 | MTR_5g019060 | 43.380 | 355 | 191 | 7 | 95 | 443 | 41 | 391 | 3.51e-87 | 271 |
MS.gene66043.t1 | MTR_5g035840 | 42.416 | 356 | 193 | 8 | 95 | 443 | 41 | 391 | 2.41e-86 | 269 |
MS.gene66043.t1 | MTR_5g019170 | 45.087 | 346 | 180 | 7 | 95 | 434 | 41 | 382 | 6.73e-86 | 270 |
MS.gene66043.t1 | MTR_5g019090 | 43.944 | 355 | 189 | 7 | 95 | 443 | 41 | 391 | 7.46e-86 | 268 |
MS.gene66043.t1 | MTR_3g070740 | 61.538 | 208 | 67 | 3 | 237 | 443 | 131 | 326 | 1.91e-85 | 265 |
MS.gene66043.t1 | MTR_1g069950 | 44.981 | 269 | 144 | 3 | 170 | 436 | 1 | 267 | 1.04e-74 | 235 |
MS.gene66043.t1 | MTR_2g023980 | 48.638 | 257 | 98 | 7 | 170 | 424 | 1 | 225 | 7.74e-69 | 222 |
MS.gene66043.t1 | MTR_6g077900 | 44.727 | 275 | 129 | 6 | 128 | 400 | 6 | 259 | 7.44e-62 | 202 |
MS.gene66043.t1 | MTR_1g115550 | 36.806 | 288 | 156 | 7 | 112 | 398 | 13 | 275 | 2.13e-39 | 144 |
MS.gene66043.t1 | MTR_1g067450 | 35.192 | 287 | 162 | 4 | 112 | 398 | 62 | 324 | 1.21e-36 | 138 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66043.t1 | AT4G13710 | 75.231 | 432 | 96 | 4 | 23 | 443 | 39 | 470 | 0.0 | 682 |
MS.gene66043.t1 | AT4G13710 | 76.485 | 421 | 88 | 4 | 31 | 443 | 34 | 451 | 0.0 | 676 |
MS.gene66043.t1 | AT1G04680 | 79.353 | 402 | 79 | 1 | 46 | 443 | 28 | 429 | 0.0 | 662 |
MS.gene66043.t1 | AT3G24670 | 75.459 | 436 | 101 | 2 | 11 | 443 | 8 | 440 | 0.0 | 660 |
MS.gene66043.t1 | AT3G07010 | 81.558 | 385 | 71 | 0 | 59 | 443 | 32 | 416 | 0.0 | 660 |
MS.gene66043.t1 | AT3G07010 | 82.609 | 368 | 64 | 0 | 76 | 443 | 16 | 383 | 0.0 | 634 |
MS.gene66043.t1 | AT4G13210 | 74.194 | 434 | 102 | 4 | 12 | 443 | 13 | 438 | 0.0 | 634 |
MS.gene66043.t1 | AT5G48900 | 81.558 | 385 | 71 | 0 | 59 | 443 | 33 | 417 | 0.0 | 632 |
MS.gene66043.t1 | AT4G13210 | 80.052 | 386 | 76 | 1 | 59 | 443 | 16 | 401 | 0.0 | 623 |
MS.gene66043.t1 | AT3G24230 | 65.548 | 447 | 140 | 5 | 6 | 443 | 10 | 451 | 0.0 | 594 |
MS.gene66043.t1 | AT1G67750 | 71.654 | 381 | 106 | 1 | 63 | 443 | 30 | 408 | 0.0 | 571 |
MS.gene66043.t1 | AT5G63180 | 68.342 | 398 | 117 | 2 | 48 | 443 | 42 | 432 | 0.0 | 570 |
MS.gene66043.t1 | AT4G24780 | 71.466 | 382 | 108 | 1 | 63 | 443 | 27 | 408 | 0.0 | 558 |
MS.gene66043.t1 | AT4G24780 | 71.466 | 382 | 108 | 1 | 63 | 443 | 27 | 408 | 0.0 | 558 |
MS.gene66043.t1 | AT3G27400 | 66.142 | 381 | 128 | 1 | 63 | 443 | 37 | 416 | 0.0 | 530 |
MS.gene66043.t1 | AT3G27400 | 66.142 | 381 | 128 | 1 | 63 | 443 | 33 | 412 | 0.0 | 530 |
MS.gene66043.t1 | AT3G53190 | 62.698 | 378 | 134 | 1 | 65 | 435 | 37 | 414 | 5.33e-172 | 491 |
MS.gene66043.t1 | AT5G04310 | 58.000 | 400 | 155 | 1 | 48 | 434 | 35 | 434 | 8.50e-170 | 485 |
MS.gene66043.t1 | AT5G04310 | 58.000 | 400 | 155 | 1 | 48 | 434 | 35 | 434 | 2.25e-168 | 483 |
MS.gene66043.t1 | AT5G04310 | 58.000 | 400 | 155 | 1 | 48 | 434 | 35 | 434 | 2.25e-168 | 483 |
MS.gene66043.t1 | AT3G54920 | 57.107 | 394 | 145 | 4 | 61 | 439 | 32 | 416 | 8.89e-163 | 468 |
MS.gene66043.t1 | AT5G55720 | 55.614 | 383 | 158 | 5 | 62 | 443 | 21 | 392 | 4.34e-154 | 442 |
MS.gene66043.t1 | AT1G11920 | 59.429 | 350 | 139 | 3 | 95 | 443 | 37 | 384 | 8.77e-154 | 441 |
MS.gene66043.t1 | AT3G01270 | 54.408 | 397 | 171 | 3 | 57 | 443 | 79 | 475 | 2.60e-151 | 438 |
MS.gene66043.t1 | AT1G14420 | 55.278 | 360 | 155 | 1 | 90 | 443 | 100 | 459 | 1.09e-148 | 431 |
MS.gene66043.t1 | AT5G15110 | 57.183 | 355 | 150 | 2 | 91 | 443 | 118 | 472 | 3.58e-148 | 430 |
MS.gene66043.t1 | AT4G22090 | 56.571 | 350 | 148 | 3 | 95 | 443 | 47 | 393 | 8.27e-147 | 424 |
MS.gene66043.t1 | AT4G22080 | 56.571 | 350 | 148 | 3 | 95 | 443 | 47 | 393 | 2.46e-146 | 422 |
MS.gene66043.t1 | AT2G02720 | 47.007 | 451 | 219 | 5 | 9 | 443 | 9 | 455 | 1.51e-142 | 415 |
MS.gene66043.t1 | AT1G30350 | 52.722 | 349 | 149 | 3 | 95 | 443 | 36 | 368 | 2.41e-128 | 376 |
MS.gene66043.t1 | AT5G09280 | 48.387 | 248 | 125 | 3 | 128 | 374 | 6 | 251 | 3.34e-78 | 245 |
MS.gene66043.t1 | AT3G09540 | 38.062 | 289 | 151 | 7 | 112 | 398 | 61 | 323 | 5.46e-42 | 153 |
MS.gene66043.t1 | AT3G55140 | 37.248 | 298 | 143 | 10 | 115 | 398 | 9 | 276 | 1.03e-41 | 151 |
MS.gene66043.t1 | AT3G09540 | 37.716 | 289 | 148 | 8 | 112 | 398 | 61 | 319 | 1.83e-39 | 146 |
MS.gene66043.t1 | AT3G55140 | 36.719 | 256 | 131 | 7 | 149 | 398 | 22 | 252 | 5.23e-35 | 132 |
MS.gene66043.t1 | AT3G09540 | 36.585 | 246 | 130 | 5 | 112 | 356 | 61 | 281 | 1.50e-34 | 130 |
Find 141 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCATTGCATACAACCATTT+TGG | 0.110425 | 7.3:-45666317 | MS.gene66043:CDS |
CGTAGCTCCCCTTCCCATTT+TGG | 0.137331 | 7.3:-45666717 | MS.gene66043:CDS |
TCTTTGGTTCCAGTCATATT+TGG | 0.228663 | 7.3:-45666659 | MS.gene66043:CDS |
TCATGATCAATTCTTGCTTC+AGG | 0.237394 | 7.3:+45666880 | None:intergenic |
TGGTCTTGTTGATGCTATTA+TGG | 0.249104 | 7.3:-45666604 | MS.gene66043:CDS |
CCATTGTCCTCCATCCAAAA+TGG | 0.255429 | 7.3:+45666703 | None:intergenic |
GGTGATGGCATTTCCATCTT+TGG | 0.269913 | 7.3:-45666675 | MS.gene66043:CDS |
TATGCTAGAGCCTCAAGTTT+AGG | 0.285322 | 7.3:-45665614 | MS.gene66043:CDS |
AATGATACAGGTTATGCTAT+TGG | 0.286003 | 7.3:-45666381 | MS.gene66043:intron |
TGGATACAGGGTCCGGAGTA+TGG | 0.302482 | 7.3:-45665721 | MS.gene66043:CDS |
TTCACGGGGTCGTCGTCTCT+TGG | 0.302742 | 7.3:+45666984 | None:intergenic |
GCTGATTGTGCCATTGGTTT+TGG | 0.302846 | 7.3:-45667056 | MS.gene66043:CDS |
TGACGGAGAGTGCCGGGTCT+TGG | 0.307666 | 7.3:+45666960 | None:intergenic |
CTAGTTACCTTGGCATCCTT+TGG | 0.320663 | 7.3:+45666282 | None:intergenic |
TCGGCTTACAATCATGGATA+TGG | 0.339277 | 7.3:+45666757 | None:intergenic |
ATGCTAGAGCCTCAAGTTTA+GGG | 0.340135 | 7.3:-45665613 | MS.gene66043:CDS |
TTGTAAGAATGTTACCTCTT+TGG | 0.340895 | 7.3:+45665843 | None:intergenic |
CACAATCAGCCATCCGCTTT+CGG | 0.343488 | 7.3:+45667069 | None:intergenic |
GGATAAGACCCTCCCCAAAA+TGG | 0.344066 | 7.3:+45666303 | None:intergenic |
GCCAATGTTCATATTGCCTT+TGG | 0.350632 | 7.3:-45666828 | MS.gene66043:CDS |
GTGCCGGGTCTTGGGTTCAC+GGG | 0.375121 | 7.3:+45666969 | None:intergenic |
TCCGACTAAAGAAGATGATT+TGG | 0.375192 | 7.3:+45665589 | None:intergenic |
GACGGAGAGTGCCGGGTCTT+GGG | 0.379146 | 7.3:+45666961 | None:intergenic |
ATTGGCACCACGACCATCTA+TGG | 0.380940 | 7.3:+45666845 | None:intergenic |
CATGATCAATTCTTGCTTCA+GGG | 0.386947 | 7.3:+45666881 | None:intergenic |
AATGTTACCTCTTTGGCAAA+AGG | 0.387769 | 7.3:+45665850 | None:intergenic |
ATGATACAGGTTATGCTATT+GGG | 0.392819 | 7.3:-45666380 | MS.gene66043:intron |
AGTGCCGGGTCTTGGGTTCA+CGG | 0.416450 | 7.3:+45666968 | None:intergenic |
GGTCTTGTTGATGCTATTAT+GGG | 0.421679 | 7.3:-45666603 | MS.gene66043:CDS |
TCACGGGGTCGTCGTCTCTT+GGG | 0.425792 | 7.3:+45666985 | None:intergenic |
TTGCCTTGGCTGTTAATTGT+GGG | 0.427394 | 7.3:+45665895 | None:intergenic |
TCCCAGTCGGCTTACAATCA+TGG | 0.429765 | 7.3:+45666751 | None:intergenic |
GAGTATGGAAGGGTTGGAAT+TGG | 0.435726 | 7.3:-45665706 | MS.gene66043:CDS |
AACAGTTTCAAGACCATAGA+TGG | 0.441561 | 7.3:-45666858 | MS.gene66043:CDS |
CACTGGGTGATGTATGCTAT+TGG | 0.442502 | 7.3:-45665931 | MS.gene66043:CDS |
GTTGCCTTGGCTGTTAATTG+TGG | 0.451055 | 7.3:+45665894 | None:intergenic |
CTCAATTTACCTCGTTGTGG+TGG | 0.451940 | 7.3:+45666544 | None:intergenic |
TATGGAAGGGTTGGAATTGG+AGG | 0.453341 | 7.3:-45665703 | MS.gene66043:CDS |
GTGACAAAGAGGGTGGATAC+AGG | 0.460057 | 7.3:-45665734 | MS.gene66043:CDS |
ATGTTACCTCTTTGGCAAAA+GGG | 0.462229 | 7.3:+45665851 | None:intergenic |
CGGATGGCTGATTGTGCCAT+TGG | 0.463073 | 7.3:-45667062 | MS.gene66043:CDS |
AATATGACTGGAACCAAAGA+TGG | 0.477110 | 7.3:+45666662 | None:intergenic |
GTGGTGGGTGAAGTAGTTAT+TGG | 0.479572 | 7.3:+45666560 | None:intergenic |
GCTGGCGCTGTGACAAGCTT+TGG | 0.480343 | 7.3:-45667100 | MS.gene66043:CDS |
GGTTGGAATTGGAGGTCTGA+GGG | 0.482075 | 7.3:-45665695 | MS.gene66043:CDS |
CTGGTGTTATTAAATGTCGC+CGG | 0.482263 | 7.3:-45665550 | MS.gene66043:CDS |
ACCATGGAAGCAATCTCCTC+TGG | 0.483733 | 7.3:+45670036 | None:intergenic |
ATCCATGATTGTAAGCCGAC+TGG | 0.492456 | 7.3:-45666753 | MS.gene66043:CDS |
GCCGCAGCTCCTCTTCCTGA+TGG | 0.492712 | 7.3:+45665641 | None:intergenic |
CAGCGCCAGCAGTCATCCAT+TGG | 0.493207 | 7.3:+45667113 | None:intergenic |
AAGAAGCGTTATAGCGAGAA+TGG | 0.493349 | 7.3:+45670690 | None:intergenic |
CATTGTCCTCCATCCAAAAT+GGG | 0.494585 | 7.3:+45666704 | None:intergenic |
ACAGCGTGACGGAGAGTGCC+GGG | 0.496458 | 7.3:+45666954 | None:intergenic |
TCTCTGTCTAATTGCGCTGA+TGG | 0.499109 | 7.3:-45666624 | MS.gene66043:CDS |
TTAGTCGGAACTTTAACTGC+AGG | 0.500265 | 7.3:-45665575 | MS.gene66043:CDS |
TGGTGTTATTAAATGTCGCC+GGG | 0.500739 | 7.3:-45665549 | MS.gene66043:CDS |
GTAGTTATTGGAAACGGTAA+TGG | 0.501809 | 7.3:+45666572 | None:intergenic |
TCCAGAGGAGATTGCTTCCA+TGG | 0.502756 | 7.3:-45670037 | MS.gene66043:CDS |
TACAGGGTCCGGAGTATGGA+AGG | 0.503644 | 7.3:-45665717 | MS.gene66043:CDS |
GTGAAGCAACAATGGAGTTA+CGG | 0.503946 | 7.3:-45670735 | None:intergenic |
TTCATTAGAATCAATAGCAT+TGG | 0.506032 | 7.3:+45670657 | None:intergenic |
CCCAAAATGGTTGTATGCAA+TGG | 0.513203 | 7.3:+45666316 | None:intergenic |
GGGCAAGGTATCTGTTGCCT+TGG | 0.513269 | 7.3:+45665881 | None:intergenic |
GAAATCCAATGGATGACTGC+TGG | 0.513725 | 7.3:-45667118 | MS.gene66043:CDS |
GTGATCAATCCAAATATGAC+TGG | 0.515085 | 7.3:+45666650 | None:intergenic |
GACAGCGTGACGGAGAGTGC+CGG | 0.515385 | 7.3:+45666953 | None:intergenic |
ATTGGAAACGGTAATGGCGG+TGG | 0.517945 | 7.3:+45666578 | None:intergenic |
GTCACGCTGTCATTCAAGAT+AGG | 0.520287 | 7.3:-45666941 | MS.gene66043:CDS |
TTTGGTCGCAACGCTATTGG+TGG | 0.523634 | 7.3:-45667038 | MS.gene66043:CDS |
CATGATGATAGTGTTGTGAA+TGG | 0.528531 | 7.3:-45670481 | MS.gene66043:intron |
CTTTGGCAAAAGGGTTCTGA+GGG | 0.532600 | 7.3:+45665860 | None:intergenic |
GCCAAATCATCTTCTTTAGT+CGG | 0.537093 | 7.3:-45665590 | MS.gene66043:CDS |
AATAGTAATGCATGCTCCAA+AGG | 0.544329 | 7.3:+45666812 | None:intergenic |
TCTTTGGCAAAAGGGTTCTG+AGG | 0.544752 | 7.3:+45665859 | None:intergenic |
TCCATGATTGTAAGCCGACT+GGG | 0.546175 | 7.3:-45666752 | MS.gene66043:CDS |
AACGCTATTGGTGGCCGCGA+CGG | 0.546316 | 7.3:-45667029 | MS.gene66043:CDS |
GAGCTTGAATAATTCATCAA+TGG | 0.547562 | 7.3:-45670437 | MS.gene66043:CDS |
AAGAGGGTGGATACAGGGTC+CGG | 0.551709 | 7.3:-45665728 | MS.gene66043:CDS |
TCAATTTACCTCGTTGTGGT+GGG | 0.552926 | 7.3:+45666545 | None:intergenic |
TTGGGGAGGGTCTTATCCAA+AGG | 0.555778 | 7.3:-45666298 | MS.gene66043:CDS |
TCCTCCATCCAAAATGGGAA+GGG | 0.556374 | 7.3:+45666709 | None:intergenic |
CTATTGGTGGCCGCGACGGA+AGG | 0.559131 | 7.3:-45667025 | MS.gene66043:CDS |
GACCCCGTGAACCCAAGACC+CGG | 0.562529 | 7.3:-45666972 | MS.gene66043:CDS |
GGTCCGGAGTATGGAAGGGT+TGG | 0.562652 | 7.3:-45665712 | MS.gene66043:CDS |
ATCACCAATGTCATCATCCA+TGG | 0.564338 | 7.3:-45666783 | MS.gene66043:CDS |
GTCTTATCCAAAGGATGCCA+AGG | 0.567344 | 7.3:-45666289 | MS.gene66043:intron |
GGTGAAGTAGTTATTGGAAA+CGG | 0.568326 | 7.3:+45666566 | None:intergenic |
GGAACTTTAACTGCAGGTGC+TGG | 0.568678 | 7.3:-45665569 | MS.gene66043:CDS |
GTCCTCCATCCAAAATGGGA+AGG | 0.575724 | 7.3:+45666708 | None:intergenic |
TGTATTAACACATGCCACCC+CGG | 0.580417 | 7.3:+45665531 | None:intergenic |
TACGCAATCACACGGAGAGA+AGG | 0.580498 | 7.3:-45667169 | MS.gene66043:CDS |
TGACAAAGAGGGTGGATACA+GGG | 0.585715 | 7.3:-45665733 | MS.gene66043:CDS |
GGGTTGGAATTGGAGGTCTG+AGG | 0.587913 | 7.3:-45665696 | MS.gene66043:CDS |
TGCCGGGTCTTGGGTTCACG+GGG | 0.590324 | 7.3:+45666970 | None:intergenic |
CCTCCATCCAAAATGGGAAG+GGG | 0.592528 | 7.3:+45666710 | None:intergenic |
TAAACAATGACTATACACAC+TGG | 0.595352 | 7.3:-45665948 | MS.gene66043:CDS |
ATAATTCATCAATGGCGGAA+AGG | 0.597934 | 7.3:-45670429 | MS.gene66043:intron |
AGTCTCAATTTACCTCGTTG+TGG | 0.602217 | 7.3:+45666541 | None:intergenic |
ATGTGGGACTGGAAATCCAA+TGG | 0.603052 | 7.3:-45667129 | MS.gene66043:CDS |
GTACAGACGCCGAAAGCGGA+TGG | 0.604197 | 7.3:-45667078 | MS.gene66043:CDS |
CAAAAGGGTTCTGAGGGGCA+AGG | 0.604683 | 7.3:+45665866 | None:intergenic |
AATCATGGATATGGACACCA+TGG | 0.604716 | 7.3:+45666766 | None:intergenic |
TCCAAAGGCAATATGAACAT+TGG | 0.605546 | 7.3:+45666827 | None:intergenic |
TGATTTGGCCCCTAAACTTG+AGG | 0.605907 | 7.3:+45665604 | None:intergenic |
ATTCCAACCCTTCCATACTC+CGG | 0.611120 | 7.3:+45665709 | None:intergenic |
TCATTCAAGATAGGCCATTG+TGG | 0.612337 | 7.3:-45666932 | MS.gene66043:CDS |
CTTGAATAATTCATCAATGG+CGG | 0.613119 | 7.3:-45670434 | MS.gene66043:CDS |
TTCAAGACCATAGATGGTCG+TGG | 0.615460 | 7.3:-45666852 | MS.gene66043:CDS |
GTTATTAAATGTCGCCGGGG+TGG | 0.616534 | 7.3:-45665545 | MS.gene66043:CDS |
AGGACAATGGCTGATGGTGA+TGG | 0.620179 | 7.3:-45666690 | MS.gene66043:CDS |
CTATTGATTCTAATGAATCA+CGG | 0.625598 | 7.3:-45670651 | MS.gene66043:intron |
TAAGCCGACTGGGAATGCTA+TGG | 0.626089 | 7.3:-45666742 | MS.gene66043:CDS |
TCCATCAGGAAGAGGAGCTG+CGG | 0.628803 | 7.3:-45665642 | MS.gene66043:CDS |
TGGGTGATGTATGCTATTGG+AGG | 0.631164 | 7.3:-45665928 | MS.gene66043:CDS |
CAGGACTATACGCAATCACA+CGG | 0.632843 | 7.3:-45667177 | MS.gene66043:CDS |
TTTGGTACAGACGCCGAAAG+CGG | 0.639239 | 7.3:-45667082 | MS.gene66043:CDS |
GGATGGAGGACAATGGCTGA+TGG | 0.643191 | 7.3:-45666696 | MS.gene66043:CDS |
AAACAATGACTATACACACT+GGG | 0.644998 | 7.3:-45665947 | MS.gene66043:CDS |
TGCTAGAGCCTCAAGTTTAG+GGG | 0.654577 | 7.3:-45665612 | MS.gene66043:CDS |
ACAGGGTCCGGAGTATGGAA+GGG | 0.658271 | 7.3:-45665716 | MS.gene66043:CDS |
TATCTTGAATGACAGCGTGA+CGG | 0.659538 | 7.3:+45666943 | None:intergenic |
GAATTATTACGTATCAACCA+TGG | 0.659930 | 7.3:+45670020 | None:intergenic |
AGCGTTGCGACCAAAACCAA+TGG | 0.662694 | 7.3:+45667046 | None:intergenic |
CTCTTGAACACAATCCACAA+TGG | 0.663084 | 7.3:+45666918 | None:intergenic |
TGGACAGGTGACAAAGAGGG+TGG | 0.664985 | 7.3:-45665741 | MS.gene66043:intron |
GAACCCACAATTAACAGCCA+AGG | 0.665968 | 7.3:-45665898 | MS.gene66043:CDS |
GAATATTGCAGATGTAGACA+CGG | 0.668694 | 7.3:-45665985 | MS.gene66043:intron |
GTTATTGGAAACGGTAATGG+CGG | 0.672422 | 7.3:+45666575 | None:intergenic |
GACACCATGGATGATGACAT+TGG | 0.680615 | 7.3:+45666779 | None:intergenic |
AATATTGCAGATGTAGACAC+GGG | 0.684120 | 7.3:-45665984 | MS.gene66043:intron |
ATGTGGACAGGTGACAAAGA+GGG | 0.696684 | 7.3:-45665744 | MS.gene66043:intron |
CGAACCATAGCATTCCCAGT+CGG | 0.703490 | 7.3:+45666738 | None:intergenic |
GCATGCAGTTGATAATCCAG+AGG | 0.706876 | 7.3:-45670052 | MS.gene66043:CDS |
GATGTGGACAGGTGACAAAG+AGG | 0.712511 | 7.3:-45665745 | MS.gene66043:intron |
CAACGTAGTACCTTCCGTCG+CGG | 0.714601 | 7.3:+45667015 | None:intergenic |
TATAGTCATTGTTTACCACG+TGG | 0.716427 | 7.3:+45665956 | None:intergenic |
TTTGGCAAAAGGGTTCTGAG+GGG | 0.747633 | 7.3:+45665861 | None:intergenic |
GGTGTTATTAAATGTCGCCG+GGG | 0.749848 | 7.3:-45665548 | MS.gene66043:CDS |
GATTGTGTTCAAGAGAGACA+TGG | 0.751862 | 7.3:-45666910 | MS.gene66043:CDS |
CTACTTCACCCACCACAACG+AGG | 0.767107 | 7.3:-45666553 | MS.gene66043:intron |
TAGACACGGGTATTTCCACG+TGG | 0.797672 | 7.3:-45665971 | MS.gene66043:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCATATTAAAAAATTAGAAA+AGG | + | chr7.3:45667946-45667965 | None:intergenic | 10.0% |
!! | TTATAATTAATGACATTTAT+AGG | - | chr7.3:45667156-45667175 | MS.gene66043:CDS | 10.0% |
!!! | TATTTTGTAATGATTAAAAT+CGG | - | chr7.3:45665915-45665934 | MS.gene66043:CDS | 10.0% |
!! | AATATATCAAGAAAATGTTA+TGG | + | chr7.3:45668524-45668543 | None:intergenic | 15.0% |
!! | ATCTAAATCTATCAATAAAA+AGG | + | chr7.3:45667748-45667767 | None:intergenic | 15.0% |
!! | TATTAATTATATAAAACCAG+AGG | + | chr7.3:45667410-45667429 | None:intergenic | 15.0% |
!! | TGATAAACTTTACTAAATAT+TGG | - | chr7.3:45670484-45670503 | MS.gene66043:intron | 15.0% |
!!! | AACATTTTCTTGATATATTT+TGG | - | chr7.3:45668525-45668544 | MS.gene66043:intron | 15.0% |
!!! | AGTATAACTTCTAAAATTAT+TGG | - | chr7.3:45668966-45668985 | MS.gene66043:intron | 15.0% |
!!! | ATACTTGTTAAATTTTAAAC+AGG | - | chr7.3:45669063-45669082 | MS.gene66043:intron | 15.0% |
!!! | TAACTTCTAAAATTTTTAGT+AGG | - | chr7.3:45668288-45668307 | MS.gene66043:intron | 15.0% |
!!! | TTAGTACTAGTATTTATTTT+GGG | - | chr7.3:45670051-45670070 | MS.gene66043:CDS | 15.0% |
!!! | TTATTTTTTTTCCTTTTTGA+AGG | - | chr7.3:45670017-45670036 | MS.gene66043:intron | 15.0% |
!!! | TTTAGTACTAGTATTTATTT+TGG | - | chr7.3:45670050-45670069 | MS.gene66043:CDS | 15.0% |
!!! | TTTTTTCATCAAAATTAATC+AGG | + | chr7.3:45666926-45666945 | None:intergenic | 15.0% |
!! | AAATATTGGAAAATTTGATG+TGG | - | chr7.3:45670498-45670517 | MS.gene66043:intron | 20.0% |
!! | AATATAAAGGTCATCAAATA+GGG | + | chr7.3:45667308-45667327 | None:intergenic | 20.0% |
!! | ACTCAATCTAAACTTAATTA+TGG | - | chr7.3:45667978-45667997 | MS.gene66043:intron | 20.0% |
!! | AGAAATAGACAGATAATTTA+TGG | + | chr7.3:45670231-45670250 | None:intergenic | 20.0% |
!! | ATAAATACTAGTACTAAAAC+TGG | + | chr7.3:45670048-45670067 | None:intergenic | 20.0% |
!! | CATAAAAAAACATTTGGAAA+TGG | + | chr7.3:45666842-45666861 | None:intergenic | 20.0% |
!! | GATTCACAACAAATTATAAA+TGG | + | chr7.3:45666793-45666812 | None:intergenic | 20.0% |
!! | TAAAAAGGTAGTATTAGAAA+AGG | + | chr7.3:45669793-45669812 | None:intergenic | 20.0% |
!! | TAATATATCATTCCAAAAAG+AGG | + | chr7.3:45666815-45666834 | None:intergenic | 20.0% |
!! | TAGAGAAAATTGAAATATGA+TGG | - | chr7.3:45668704-45668723 | MS.gene66043:intron | 20.0% |
!! | TTTCAAAATAAATATCACCA+TGG | - | chr7.3:45667188-45667207 | MS.gene66043:intron | 20.0% |
!! | TTTCACCATAAAAAAACATT+TGG | + | chr7.3:45666848-45666867 | None:intergenic | 20.0% |
!!! | AAAAGCATCAAAGAATATAA+AGG | + | chr7.3:45667321-45667340 | None:intergenic | 20.0% |
!!! | ATAATTCTAAAAACATCATG+AGG | + | chr7.3:45668058-45668077 | None:intergenic | 20.0% |
!!! | ATTTTGATGAAAAAATGAGT+TGG | - | chr7.3:45666931-45666950 | MS.gene66043:CDS | 20.0% |
!!! | CATTTCCAAATGTTTTTTTA+TGG | - | chr7.3:45666840-45666859 | MS.gene66043:CDS | 20.0% |
!!! | GTAAACAAGTTTTAAATAGT+AGG | - | chr7.3:45666664-45666683 | MS.gene66043:CDS | 20.0% |
!!! | TAGAATCGTGTTAATTTTAT+CGG | - | chr7.3:45666286-45666305 | MS.gene66043:intron | 20.0% |
!!! | TTTAAAATGACTCTAGTAAA+AGG | + | chr7.3:45667366-45667385 | None:intergenic | 20.0% |
! | AAAGATGTTTGTACTTGTAA+AGG | + | chr7.3:45667653-45667672 | None:intergenic | 25.0% |
! | AAATTGTATGAGTAATTGCA+TGG | - | chr7.3:45667237-45667256 | MS.gene66043:intron | 25.0% |
! | AAGTTTAGATTGAGTAGAAA+GGG | + | chr7.3:45667973-45667992 | None:intergenic | 25.0% |
! | AATTGAGTTCAAAATGATAC+AGG | - | chr7.3:45669866-45669885 | MS.gene66043:intron | 25.0% |
! | AATTGTATGAGTAATTGCAT+GGG | - | chr7.3:45667238-45667257 | MS.gene66043:intron | 25.0% |
! | ACAATTAGATGTGCTTAATA+TGG | - | chr7.3:45666719-45666738 | MS.gene66043:CDS | 25.0% |
! | ACAATTTCTAACTTTCTTGA+CGG | + | chr7.3:45667224-45667243 | None:intergenic | 25.0% |
! | AGAATAATTTAATTCTCCTC+TGG | - | chr7.3:45667391-45667410 | MS.gene66043:intron | 25.0% |
! | AGGTATAAAAAGACAAACAA+GGG | + | chr7.3:45668090-45668109 | None:intergenic | 25.0% |
! | AGTCTAATCAGAAATTTATG+TGG | + | chr7.3:45668114-45668133 | None:intergenic | 25.0% |
! | ATCTAAACTTAATTATGGCT+AGG | - | chr7.3:45667983-45668002 | MS.gene66043:intron | 25.0% |
! | ATGAGAAGTCTACTAAAATT+GGG | - | chr7.3:45670109-45670128 | MS.gene66043:intron | 25.0% |
! | ATTATTAACTTCCTGAATCT+TGG | + | chr7.3:45668609-45668628 | None:intergenic | 25.0% |
! | ATTATTATTGTTGTCTGTTG+AGG | + | chr7.3:45668821-45668840 | None:intergenic | 25.0% |
! | GAAATTTATTATGACCGAAA+TGG | + | chr7.3:45667593-45667612 | None:intergenic | 25.0% |
! | GAATATAAAGGTCATCAAAT+AGG | + | chr7.3:45667309-45667328 | None:intergenic | 25.0% |
! | GTCTAATCAGAAATTTATGT+GGG | + | chr7.3:45668113-45668132 | None:intergenic | 25.0% |
! | TAAATATCACCATGGAAAAA+CGG | - | chr7.3:45667196-45667215 | MS.gene66043:intron | 25.0% |
! | TAAGTTTAGATTGAGTAGAA+AGG | + | chr7.3:45667974-45667993 | None:intergenic | 25.0% |
! | TACAGATAAAAAAGTTGAGT+TGG | - | chr7.3:45666434-45666453 | MS.gene66043:intron | 25.0% |
! | TCGTTTAGTGATGATTTAAA+CGG | - | chr7.3:45666123-45666142 | MS.gene66043:intron | 25.0% |
! | TCTAAACTTAATTATGGCTA+GGG | - | chr7.3:45667984-45668003 | MS.gene66043:intron | 25.0% |
! | TTACTTAAGATAATGAAGGA+GGG | + | chr7.3:45669746-45669765 | None:intergenic | 25.0% |
! | TTATTATTGTTGTCTGTTGA+GGG | + | chr7.3:45668820-45668839 | None:intergenic | 25.0% |
! | TTCATTAGAATCAATAGCAT+TGG | + | chr7.3:45665605-45665624 | None:intergenic | 25.0% |
! | TTCTTAGCTAATGAAATATG+TGG | - | chr7.3:45670447-45670466 | MS.gene66043:CDS | 25.0% |
! | TTGTAGTAAAACAGAATCAA+CGG | + | chr7.3:45666076-45666095 | None:intergenic | 25.0% |
! | TTTAGAAGTTATACTGCTAA+GGG | + | chr7.3:45668961-45668980 | None:intergenic | 25.0% |
!! | AATTATTGGGTCTTTGTTTA+TGG | - | chr7.3:45667913-45667932 | MS.gene66043:intron | 25.0% |
!! | GAAGAGTGATTTACTAATTT+TGG | + | chr7.3:45668202-45668221 | None:intergenic | 25.0% |
!! | GTTGTTACTTAAGATAATGA+AGG | + | chr7.3:45669750-45669769 | None:intergenic | 25.0% |
!! | TATCAAGGATGCATAAATTT+TGG | + | chr7.3:45667093-45667112 | None:intergenic | 25.0% |
!! | TTTTCTGTTCAATTCAACAT+TGG | + | chr7.3:45669044-45669063 | None:intergenic | 25.0% |
!!! | ATGTTTTTTTATGGTGAAAG+TGG | - | chr7.3:45666849-45666868 | MS.gene66043:CDS | 25.0% |
!!! | CTATTGATTCTAATGAATCA+CGG | - | chr7.3:45665608-45665627 | MS.gene66043:CDS | 25.0% |
!!! | GTTGAGTTGGAATATTTTTT+TGG | - | chr7.3:45666447-45666466 | MS.gene66043:intron | 25.0% |
!!! | TGATGTTTTTAGAATTATGC+TGG | - | chr7.3:45668060-45668079 | MS.gene66043:intron | 25.0% |
!!! | TTTTAGAAGTTATACTGCTA+AGG | + | chr7.3:45668962-45668981 | None:intergenic | 25.0% |
!!! | TTTTCTTGATATATTTTGGC+TGG | - | chr7.3:45668529-45668548 | MS.gene66043:intron | 25.0% |
AAAAAGCTCCATTTAGCAAA+AGG | + | chr7.3:45670593-45670612 | None:intergenic | 30.0% | |
AAACAATGACTATACACACT+GGG | - | chr7.3:45670312-45670331 | MS.gene66043:intron | 30.0% | |
AAATACAAACTAAAGCCAAG+TGG | + | chr7.3:45666641-45666660 | None:intergenic | 30.0% | |
AATACAAACTAAAGCCAAGT+GGG | + | chr7.3:45666640-45666659 | None:intergenic | 30.0% | |
AATGATACAGGTTATGCTAT+TGG | - | chr7.3:45669878-45669897 | MS.gene66043:intron | 30.0% | |
ACCACTATACAAGAAATGAA+AGG | + | chr7.3:45667803-45667822 | None:intergenic | 30.0% | |
ACTACAATAAATGCCAAGTT+AGG | + | chr7.3:45668685-45668704 | None:intergenic | 30.0% | |
AGCTGGCAAATAAAATATTC+TGG | + | chr7.3:45667541-45667560 | None:intergenic | 30.0% | |
AGGACTGAATTAAAACTTGA+AGG | + | chr7.3:45668884-45668903 | None:intergenic | 30.0% | |
ATAGAATGATACGGTGTATA+CGG | + | chr7.3:45668751-45668770 | None:intergenic | 30.0% | |
ATGATACAGGTTATGCTATT+GGG | - | chr7.3:45669879-45669898 | MS.gene66043:intron | 30.0% | |
ATTTATGCATCCTTGATACA+AGG | - | chr7.3:45667095-45667114 | MS.gene66043:CDS | 30.0% | |
CATAAATCTTACACGTTACA+GGG | - | chr7.3:45668156-45668175 | MS.gene66043:intron | 30.0% | |
CATGAGAAGTCTACTAAAAT+TGG | - | chr7.3:45670108-45670127 | MS.gene66043:intron | 30.0% | |
CATTTAATTGATCATGTGCA+TGG | - | chr7.3:45666510-45666529 | MS.gene66043:intron | 30.0% | |
CCACTATACAAGAAATGAAA+GGG | + | chr7.3:45667802-45667821 | None:intergenic | 30.0% | |
CTAAACTTAATTATGGCTAG+GGG | - | chr7.3:45667985-45668004 | MS.gene66043:intron | 30.0% | |
CTACAATAAATGCCAAGTTA+GGG | + | chr7.3:45668684-45668703 | None:intergenic | 30.0% | |
CTTGAATAATTCATCAATGG+CGG | - | chr7.3:45665825-45665844 | MS.gene66043:intron | 30.0% | |
GAATTATTACGTATCAACCA+TGG | + | chr7.3:45666242-45666261 | None:intergenic | 30.0% | |
GAGCTTGAATAATTCATCAA+TGG | - | chr7.3:45665822-45665841 | MS.gene66043:intron | 30.0% | |
GAGGTATAAAAAGACAAACA+AGG | + | chr7.3:45668091-45668110 | None:intergenic | 30.0% | |
GTTACTTAAGATAATGAAGG+AGG | + | chr7.3:45669747-45669766 | None:intergenic | 30.0% | |
TAAACAATGACTATACACAC+TGG | - | chr7.3:45670311-45670330 | MS.gene66043:intron | 30.0% | |
TAATCAGAAATTTATGTGGG+AGG | + | chr7.3:45668110-45668129 | None:intergenic | 30.0% | |
TACAATAAATGCCAAGTTAG+GGG | + | chr7.3:45668683-45668702 | None:intergenic | 30.0% | |
TGCAGATAATTCTAATCCAA+CGG | + | chr7.3:45665971-45665990 | None:intergenic | 30.0% | |
TGGCCATTTAATAAGTTCAT+GGG | + | chr7.3:45668589-45668608 | None:intergenic | 30.0% | |
TTATTAAATGGCCAAGATTC+AGG | - | chr7.3:45668595-45668614 | MS.gene66043:intron | 30.0% | |
TTGGCCATTTAATAAGTTCA+TGG | + | chr7.3:45668590-45668609 | None:intergenic | 30.0% | |
TTGTAAGAATGTTACCTCTT+TGG | + | chr7.3:45670419-45670438 | None:intergenic | 30.0% | |
TTTATTATGACCGAAATGGT+CGG | + | chr7.3:45667589-45667608 | None:intergenic | 30.0% | |
! | AGTCATGAAGATTGGATTTT+AGG | + | chr7.3:45667687-45667706 | None:intergenic | 30.0% |
! | GTAAAGGCAATTTTCAGATA+AGG | + | chr7.3:45667637-45667656 | None:intergenic | 30.0% |
! | GTATTTTCTTCCTCTGTTTT+TGG | - | chr7.3:45666547-45666566 | MS.gene66043:intron | 30.0% |
! | TCTATTTCTTGCACTAACAA+TGG | - | chr7.3:45670242-45670261 | MS.gene66043:intron | 30.0% |
! | TTTTAAATACTACTGCAGTC+TGG | + | chr7.3:45667283-45667302 | None:intergenic | 30.0% |
!! | TTTGTTGTGAATCCTCTTTT+TGG | - | chr7.3:45666800-45666819 | MS.gene66043:CDS | 30.0% |
!!! | AGTTTGAGTTTTTTCTCATG+TGG | - | chr7.3:45669113-45669132 | MS.gene66043:intron | 30.0% |
!!! | GTTTGAGTTTTTTCTCATGT+GGG | - | chr7.3:45669114-45669133 | MS.gene66043:intron | 30.0% |
!!! | TTTTTTACGAGTGCGATTTA+TGG | - | chr7.3:45665890-45665909 | MS.gene66043:CDS | 30.0% |
AAATTACCCGTGTGTCTTAA+AGG | + | chr7.3:45668904-45668923 | None:intergenic | 35.0% | |
AACAGTTTCAAGACCATAGA+TGG | - | chr7.3:45669401-45669420 | MS.gene66043:intron | 35.0% | |
AATAGTAATGCATGCTCCAA+AGG | + | chr7.3:45669450-45669469 | None:intergenic | 35.0% | |
AATATGACTGGAACCAAAGA+TGG | + | chr7.3:45669600-45669619 | None:intergenic | 35.0% | |
AATATTGCAGATGTAGACAC+GGG | - | chr7.3:45670275-45670294 | MS.gene66043:intron | 35.0% | |
AATGTTACCTCTTTGGCAAA+AGG | + | chr7.3:45670412-45670431 | None:intergenic | 35.0% | |
AATGTTACTGCTAGTTACCT+TGG | + | chr7.3:45669990-45670009 | None:intergenic | 35.0% | |
ACCCCCATGAACTTATTAAA+TGG | - | chr7.3:45668583-45668602 | MS.gene66043:intron | 35.0% | |
ACTTCTCATGTCAAATAGAG+AGG | + | chr7.3:45670098-45670117 | None:intergenic | 35.0% | |
AGGATACGGATAGAATGATA+CGG | + | chr7.3:45668760-45668779 | None:intergenic | 35.0% | |
AGTGTCCAGCTTAACAATAT+CGG | + | chr7.3:45666334-45666353 | None:intergenic | 35.0% | |
ATCACTCTTCAGTAGTCAAA+AGG | - | chr7.3:45668212-45668231 | MS.gene66043:intron | 35.0% | |
ATCGGCATTGCTGATAAAAT+AGG | + | chr7.3:45666316-45666335 | None:intergenic | 35.0% | |
ATGACAACTAGACCTCTTTA+TGG | - | chr7.3:45670137-45670156 | MS.gene66043:intron | 35.0% | |
ATGTTACCTCTTTGGCAAAA+GGG | + | chr7.3:45670411-45670430 | None:intergenic | 35.0% | |
CATATCTGATCCTTGTATCA+AGG | + | chr7.3:45667108-45667127 | None:intergenic | 35.0% | |
CATGATCAATTCTTGCTTCA+GGG | + | chr7.3:45669381-45669400 | None:intergenic | 35.0% | |
CCATAAATCTTACACGTTAC+AGG | - | chr7.3:45668155-45668174 | MS.gene66043:intron | 35.0% | |
CCCTTTCATTTCTTGTATAG+TGG | - | chr7.3:45667799-45667818 | MS.gene66043:intron | 35.0% | |
CCTGTAACGTGTAAGATTTA+TGG | + | chr7.3:45668158-45668177 | None:intergenic | 35.0% | |
GAATATTGCAGATGTAGACA+CGG | - | chr7.3:45670274-45670293 | MS.gene66043:intron | 35.0% | |
GCATGAATTCCTAATAGTCT+GGG | + | chr7.3:45668395-45668414 | None:intergenic | 35.0% | |
GCCAAATCATCTTCTTTAGT+CGG | - | chr7.3:45670669-45670688 | MS.gene66043:CDS | 35.0% | |
GCCATTTAATAAGTTCATGG+GGG | + | chr7.3:45668587-45668606 | None:intergenic | 35.0% | |
GGCCATTTAATAAGTTCATG+GGG | + | chr7.3:45668588-45668607 | None:intergenic | 35.0% | |
GGTGAAGTAGTTATTGGAAA+CGG | + | chr7.3:45669696-45669715 | None:intergenic | 35.0% | |
GTAGTTATTGGAAACGGTAA+TGG | + | chr7.3:45669690-45669709 | None:intergenic | 35.0% | |
GTGATCAATCCAAATATGAC+TGG | + | chr7.3:45669612-45669631 | None:intergenic | 35.0% | |
GTGATTGAAGTCATGAAGAT+TGG | + | chr7.3:45667695-45667714 | None:intergenic | 35.0% | |
GTTCATAAACCCAGACTATT+AGG | - | chr7.3:45668383-45668402 | MS.gene66043:intron | 35.0% | |
TACTGCAGTCTGGTAATAAA+TGG | + | chr7.3:45667273-45667292 | None:intergenic | 35.0% | |
TACTTTCTCCTATGTTTCTC+TGG | - | chr7.3:45667864-45667883 | MS.gene66043:intron | 35.0% | |
TATAGTCATTGTTTACCACG+TGG | + | chr7.3:45670306-45670325 | None:intergenic | 35.0% | |
TCACTCTTCAGTAGTCAAAA+GGG | - | chr7.3:45668213-45668232 | MS.gene66043:intron | 35.0% | |
TCATGATCAATTCTTGCTTC+AGG | + | chr7.3:45669382-45669401 | None:intergenic | 35.0% | |
TCCAAAGGCAATATGAACAT+TGG | + | chr7.3:45669435-45669454 | None:intergenic | 35.0% | |
TCCGACTAAAGAAGATGATT+TGG | + | chr7.3:45670673-45670692 | None:intergenic | 35.0% | |
TGCATGAATTCCTAATAGTC+TGG | + | chr7.3:45668396-45668415 | None:intergenic | 35.0% | |
TGGGTCAACAATAAAGGATA+CGG | + | chr7.3:45668774-45668793 | None:intergenic | 35.0% | |
TTAAGCTGGACACTATTAAC+TGG | - | chr7.3:45666340-45666359 | MS.gene66043:CDS | 35.0% | |
TTCGTAAACCAGAGAAACAT+AGG | + | chr7.3:45667875-45667894 | None:intergenic | 35.0% | |
TTCTCAAAAGCCAAAAACAG+AGG | + | chr7.3:45666560-45666579 | None:intergenic | 35.0% | |
TTGGAAAATTTGATGTGGAC+AGG | - | chr7.3:45670503-45670522 | MS.gene66043:intron | 35.0% | |
! | AACACTCTTTAGAAGAACAG+AGG | + | chr7.3:45670194-45670213 | None:intergenic | 35.0% |
! | ACCATTGCATACAACCATTT+TGG | - | chr7.3:45669942-45669961 | MS.gene66043:intron | 35.0% |
! | ATAAAGGTGTAGATAACCGT+TGG | - | chr7.3:45665952-45665971 | MS.gene66043:CDS | 35.0% |
! | ATAATTCATCAATGGCGGAA+AGG | - | chr7.3:45665830-45665849 | MS.gene66043:intron | 35.0% |
! | CATGATGATAGTGTTGTGAA+TGG | - | chr7.3:45665778-45665797 | MS.gene66043:intron | 35.0% |
! | CATTGCATACAACCATTTTG+GGG | - | chr7.3:45669944-45669963 | MS.gene66043:intron | 35.0% |
! | CCATTGCATACAACCATTTT+GGG | - | chr7.3:45669943-45669962 | MS.gene66043:intron | 35.0% |
! | GATTGATTCATTAAGCACCA+TGG | + | chr7.3:45667479-45667498 | None:intergenic | 35.0% |
! | GGGTTTATGAACTCTGTTTT+TGG | + | chr7.3:45668375-45668394 | None:intergenic | 35.0% |
! | TCTTTGGTTCCAGTCATATT+TGG | - | chr7.3:45669600-45669619 | MS.gene66043:intron | 35.0% |
! | TGTGTATGCATTTTCAGCTT+AGG | - | chr7.3:45666169-45666188 | MS.gene66043:intron | 35.0% |
! | TGTGTGTTACTGATTACCTT+GGG | - | chr7.3:45668324-45668343 | MS.gene66043:intron | 35.0% |
! | TTGTGTGTTACTGATTACCT+TGG | - | chr7.3:45668323-45668342 | MS.gene66043:intron | 35.0% |
!! | ATTCAGTCCTTTAAGACACA+CGG | - | chr7.3:45668894-45668913 | MS.gene66043:intron | 35.0% |
!! | GGTCTTGTTGATGCTATTAT+GGG | - | chr7.3:45669656-45669675 | MS.gene66043:intron | 35.0% |
!! | TGGTCTTGTTGATGCTATTA+TGG | - | chr7.3:45669655-45669674 | MS.gene66043:intron | 35.0% |
!!! | ACTCTGTTTTTGGTTCTTTC+AGG | + | chr7.3:45668365-45668384 | None:intergenic | 35.0% |
!!! | TGTTTTTGGCTTTTGAGAAG+AGG | - | chr7.3:45666561-45666580 | MS.gene66043:CDS | 35.0% |
AAACTAGATCTCCCCTAACT+TGG | - | chr7.3:45668669-45668688 | MS.gene66043:intron | 40.0% | |
AATCATGGATATGGACACCA+TGG | + | chr7.3:45669496-45669515 | None:intergenic | 40.0% | |
ACAAAGGTAGCACATTCATG+TGG | + | chr7.3:45668457-45668476 | None:intergenic | 40.0% | |
ACAGGCTGTAGAAACTACAA+AGG | + | chr7.3:45668473-45668492 | None:intergenic | 40.0% | |
ACATTAGCATGTGGTTAAGC+TGG | + | chr7.3:45667558-45667577 | None:intergenic | 40.0% | |
AGTCTCAATTTACCTCGTTG+TGG | + | chr7.3:45669721-45669740 | None:intergenic | 40.0% | |
AGTTGGAATGGACCATAAAG+AGG | + | chr7.3:45670152-45670171 | None:intergenic | 40.0% | |
ATCACAATGCAACCGCTAAT+GGG | + | chr7.3:45666746-45666765 | None:intergenic | 40.0% | |
ATCACCAATGTCATCATCCA+TGG | - | chr7.3:45669476-45669495 | MS.gene66043:intron | 40.0% | |
ATCGCCATGTTCTTTGCATA+TGG | - | chr7.3:45667496-45667515 | MS.gene66043:intron | 40.0% | |
ATGCTAGAGCCTCAAGTTTA+GGG | - | chr7.3:45670646-45670665 | MS.gene66043:intron | 40.0% | |
CAAACAGTACTATTTGCCGT+CGG | - | chr7.3:45666025-45666044 | MS.gene66043:intron | 40.0% | |
CAATGCCGATATTGTTAAGC+TGG | - | chr7.3:45666326-45666345 | MS.gene66043:CDS | 40.0% | |
CATTGTCCTCCATCCAAAAT+GGG | + | chr7.3:45669558-45669577 | None:intergenic | 40.0% | |
CCAAGACATGTGTTTAAGAG+GGG | + | chr7.3:45667826-45667845 | None:intergenic | 40.0% | |
CCCAAAATGGTTGTATGCAA+TGG | + | chr7.3:45669946-45669965 | None:intergenic | 40.0% | |
CTCTTAAACACATGTCTTGG+CGG | - | chr7.3:45667826-45667845 | MS.gene66043:intron | 40.0% | |
CTCTTGAACACAATCCACAA+TGG | + | chr7.3:45669344-45669363 | None:intergenic | 40.0% | |
GATCCCATATGCAAAGAACA+TGG | + | chr7.3:45667503-45667522 | None:intergenic | 40.0% | |
GATCTCAGAACATTAGCATG+TGG | + | chr7.3:45667567-45667586 | None:intergenic | 40.0% | |
GATTCATTAAGCACCATGGA+AGG | + | chr7.3:45667475-45667494 | None:intergenic | 40.0% | |
GATTGTGTTCAAGAGAGACA+TGG | - | chr7.3:45669349-45669368 | MS.gene66043:intron | 40.0% | |
GCAGTCTGGTAATAAATGGT+GGG | + | chr7.3:45667269-45667288 | None:intergenic | 40.0% | |
GCCAAGACATGTGTTTAAGA+GGG | + | chr7.3:45667827-45667846 | None:intergenic | 40.0% | |
GCCAATGTTCATATTGCCTT+TGG | - | chr7.3:45669431-45669450 | MS.gene66043:intron | 40.0% | |
GCTTAATATGGTCCCATTAG+CGG | - | chr7.3:45666731-45666750 | MS.gene66043:CDS | 40.0% | |
GGGACACATTTCAGTATTCA+GGG | - | chr7.3:45668005-45668024 | MS.gene66043:intron | 40.0% | |
GTAAAACAGAATCAACGGCT+CGG | + | chr7.3:45666071-45666090 | None:intergenic | 40.0% | |
GTATGAGTAATTGCATGGGT+AGG | - | chr7.3:45667242-45667261 | MS.gene66043:intron | 40.0% | |
GTCATGTGGGTCAACAATAA+AGG | + | chr7.3:45668780-45668799 | None:intergenic | 40.0% | |
TATCTTGAATGACAGCGTGA+CGG | + | chr7.3:45669319-45669338 | None:intergenic | 40.0% | |
TATGCTAGAGCCTCAAGTTT+AGG | - | chr7.3:45670645-45670664 | MS.gene66043:intron | 40.0% | |
TCAATTTACCTCGTTGTGGT+GGG | + | chr7.3:45669717-45669736 | None:intergenic | 40.0% | |
TCATTCAAGATAGGCCATTG+TGG | - | chr7.3:45669327-45669346 | MS.gene66043:intron | 40.0% | |
TCGCCATGTTCTTTGCATAT+GGG | - | chr7.3:45667497-45667516 | MS.gene66043:intron | 40.0% | |
TCGGCTTACAATCATGGATA+TGG | + | chr7.3:45669505-45669524 | None:intergenic | 40.0% | |
TGCAGTCTGGTAATAAATGG+TGG | + | chr7.3:45667270-45667289 | None:intergenic | 40.0% | |
TTAGTCGGAACTTTAACTGC+AGG | - | chr7.3:45670684-45670703 | MS.gene66043:CDS | 40.0% | |
TTGCCTTGGCTGTTAATTGT+GGG | + | chr7.3:45670367-45670386 | None:intergenic | 40.0% | |
! | GTTATTGGAAACGGTAATGG+CGG | + | chr7.3:45669687-45669706 | None:intergenic | 40.0% |
! | TTTTTCACTCCATCAGGAAG+AGG | - | chr7.3:45670609-45670628 | MS.gene66043:intron | 40.0% |
!! | AAGAAGCGTTATAGCGAGAA+TGG | + | chr7.3:45665572-45665591 | None:intergenic | 40.0% |
!! | AGTTAGGGGAGATCTAGTTT+TGG | + | chr7.3:45668669-45668688 | None:intergenic | 40.0% |
!! | CTGGTGTTATTAAATGTCGC+CGG | - | chr7.3:45670709-45670728 | MS.gene66043:CDS | 40.0% |
!! | TGGTGTTATTAAATGTCGCC+GGG | - | chr7.3:45670710-45670729 | MS.gene66043:CDS | 40.0% |
!! | TTCAGTCCTTTAAGACACAC+GGG | - | chr7.3:45668895-45668914 | MS.gene66043:intron | 40.0% |
!!! | AGTTTTTTCTCATGTGGGAC+TGG | - | chr7.3:45669119-45669138 | MS.gene66043:intron | 40.0% |
!!! | GTTAGGGGAGATCTAGTTTT+GGG | + | chr7.3:45668668-45668687 | None:intergenic | 40.0% |
!!! | TTAGGGGAGATCTAGTTTTG+GGG | + | chr7.3:45668667-45668686 | None:intergenic | 40.0% |
AACTGGACGCTCCTTCAAAA+AGG | + | chr7.3:45670031-45670050 | None:intergenic | 45.0% | |
ACGGTGTATACGGAATAACG+AGG | + | chr7.3:45668741-45668760 | None:intergenic | 45.0% | |
ATCCATGATTGTAAGCCGAC+TGG | - | chr7.3:45669506-45669525 | MS.gene66043:intron | 45.0% | |
ATGTGGACAGGTGACAAAGA+GGG | - | chr7.3:45670515-45670534 | MS.gene66043:intron | 45.0% | |
ATGTGGGACTGGAAATCCAA+TGG | - | chr7.3:45669130-45669149 | MS.gene66043:intron | 45.0% | |
ATTCCAACCCTTCCATACTC+CGG | + | chr7.3:45670553-45670572 | None:intergenic | 45.0% | |
CAAATAGAGAGGCTCAGCTT+AGG | + | chr7.3:45670087-45670106 | None:intergenic | 45.0% | |
CAACTTCCTAGTGTCTCAGA+GGG | - | chr7.3:45670167-45670186 | MS.gene66043:intron | 45.0% | |
CACTGGGTGATGTATGCTAT+TGG | - | chr7.3:45670328-45670347 | MS.gene66043:intron | 45.0% | |
CAGGACTATACGCAATCACA+CGG | - | chr7.3:45669082-45669101 | MS.gene66043:intron | 45.0% | |
CCATTGTCCTCCATCCAAAA+TGG | + | chr7.3:45669559-45669578 | None:intergenic | 45.0% | |
CCCCTCTTAAACACATGTCT+TGG | - | chr7.3:45667823-45667842 | MS.gene66043:intron | 45.0% | |
CGCCAAGACATGTGTTTAAG+AGG | + | chr7.3:45667828-45667847 | None:intergenic | 45.0% | |
CGGTGTATACGGAATAACGA+GGG | + | chr7.3:45668740-45668759 | None:intergenic | 45.0% | |
CTACAAGCACAATGCATCTC+TGG | - | chr7.3:45668493-45668512 | MS.gene66043:intron | 45.0% | |
CTAGTTACCTTGGCATCCTT+TGG | + | chr7.3:45669980-45669999 | None:intergenic | 45.0% | |
CTCAATTTACCTCGTTGTGG+TGG | + | chr7.3:45669718-45669737 | None:intergenic | 45.0% | |
CTGCATGAGATAGCTCAGAA+TGG | - | chr7.3:45665986-45666005 | MS.gene66043:intron | 45.0% | |
GAAATCCAATGGATGACTGC+TGG | - | chr7.3:45669141-45669160 | MS.gene66043:intron | 45.0% | |
GAACCCACAATTAACAGCCA+AGG | - | chr7.3:45670361-45670380 | MS.gene66043:intron | 45.0% | |
GACACCATGGATGATGACAT+TGG | + | chr7.3:45669483-45669502 | None:intergenic | 45.0% | |
GAGACACTAGGAAGTTGGAA+TGG | + | chr7.3:45670164-45670183 | None:intergenic | 45.0% | |
GAGTATGGAAGGGTTGGAAT+TGG | - | chr7.3:45670553-45670572 | MS.gene66043:intron | 45.0% | |
GATCACAATGCAACCGCTAA+TGG | + | chr7.3:45666747-45666766 | None:intergenic | 45.0% | |
GATGCATTGTGCTTGTAGAC+AGG | + | chr7.3:45668491-45668510 | None:intergenic | 45.0% | |
GGGGACACATTTCAGTATTC+AGG | - | chr7.3:45668004-45668023 | MS.gene66043:intron | 45.0% | |
GTAAGTGATCAAGAGACCCA+AGG | + | chr7.3:45668343-45668362 | None:intergenic | 45.0% | |
GTATACGGAATAACGAGGGT+TGG | + | chr7.3:45668736-45668755 | None:intergenic | 45.0% | |
GTCACGCTGTCATTCAAGAT+AGG | - | chr7.3:45669318-45669337 | MS.gene66043:intron | 45.0% | |
GTCTTATCCAAAGGATGCCA+AGG | - | chr7.3:45669970-45669989 | MS.gene66043:intron | 45.0% | |
GTTGCCTTGGCTGTTAATTG+TGG | + | chr7.3:45670368-45670387 | None:intergenic | 45.0% | |
TATGGAAGGGTTGGAATTGG+AGG | - | chr7.3:45670556-45670575 | MS.gene66043:intron | 45.0% | |
TCAGGCAAACACAAGAACAG+TGG | + | chr7.3:45666908-45666927 | None:intergenic | 45.0% | |
TCCATGATTGTAAGCCGACT+GGG | - | chr7.3:45669507-45669526 | MS.gene66043:intron | 45.0% | |
TCCTCCATCCAAAATGGGAA+GGG | + | chr7.3:45669553-45669572 | None:intergenic | 45.0% | |
TCTCTGTCTAATTGCGCTGA+TGG | - | chr7.3:45669635-45669654 | MS.gene66043:intron | 45.0% | |
TCTTTGGCAAAAGGGTTCTG+AGG | + | chr7.3:45670403-45670422 | None:intergenic | 45.0% | |
TGACAAAGAGGGTGGATACA+GGG | - | chr7.3:45670526-45670545 | MS.gene66043:intron | 45.0% | |
TGCTAGAGCCTCAAGTTTAG+GGG | - | chr7.3:45670647-45670666 | MS.gene66043:intron | 45.0% | |
TGGGTGATGTATGCTATTGG+AGG | - | chr7.3:45670331-45670350 | MS.gene66043:intron | 45.0% | |
TTAAAATCGGAGCGTACACG+TGG | - | chr7.3:45665928-45665947 | MS.gene66043:CDS | 45.0% | |
TTCAAGACCATAGATGGTCG+TGG | - | chr7.3:45669407-45669426 | MS.gene66043:intron | 45.0% | |
! | CCATTTTGGATGGAGGACAA+TGG | - | chr7.3:45669556-45669575 | MS.gene66043:intron | 45.0% |
! | CTTTGGCAAAAGGGTTCTGA+GGG | + | chr7.3:45670402-45670421 | None:intergenic | 45.0% |
! | GAGGGAGACCTTTTGCTAAA+TGG | - | chr7.3:45670582-45670601 | MS.gene66043:intron | 45.0% |
! | GGTGATGGCATTTCCATCTT+TGG | - | chr7.3:45669584-45669603 | MS.gene66043:intron | 45.0% |
! | TCAGAACCCTTTTGCCAAAG+AGG | - | chr7.3:45670402-45670421 | MS.gene66043:intron | 45.0% |
! | TGATTTGGCCCCTAAACTTG+AGG | + | chr7.3:45670658-45670677 | None:intergenic | 45.0% |
!! | CGTTCTGAAGTTTCCTTCCA+TGG | - | chr7.3:45667459-45667478 | MS.gene66043:intron | 45.0% |
!! | GCATACAACCATTTTGGGGA+GGG | - | chr7.3:45669948-45669967 | MS.gene66043:intron | 45.0% |
!! | GCATGCAGTTGATAATCCAG+AGG | - | chr7.3:45666207-45666226 | MS.gene66043:intron | 45.0% |
!! | GGTGTTATTAAATGTCGCCG+GGG | - | chr7.3:45670711-45670730 | MS.gene66043:CDS | 45.0% |
!! | GTGGTGGGTGAAGTAGTTAT+TGG | + | chr7.3:45669702-45669721 | None:intergenic | 45.0% |
!! | GTTCTGAGATCCGACCATTT+CGG | - | chr7.3:45667576-45667595 | MS.gene66043:intron | 45.0% |
!! | TGCATACAACCATTTTGGGG+AGG | - | chr7.3:45669947-45669966 | MS.gene66043:intron | 45.0% |
!! | TTTGGCAAAAGGGTTCTGAG+GGG | + | chr7.3:45670401-45670420 | None:intergenic | 45.0% |
!!! | GAGATCTAGTTTTGGGGTGT+CGG | + | chr7.3:45668661-45668680 | None:intergenic | 45.0% |
!!! | GCTGATTGTGCCATTGGTTT+TGG | - | chr7.3:45669203-45669222 | MS.gene66043:intron | 45.0% |
!!! | GGAGCTTTTTTCACTCCATC+AGG | - | chr7.3:45670603-45670622 | MS.gene66043:intron | 45.0% |
!! | ATACAATAAATTATAATTAT+TGG | - | chr7.3:45667899-45667918 | MS.gene66043:intron | 5.0% |
!! | ATTCTAAATAATTAAATTAA+AGG | + | chr7.3:45666272-45666291 | None:intergenic | 5.0% |
!! | TACAATAAATTATAATTATT+GGG | - | chr7.3:45667900-45667919 | MS.gene66043:intron | 5.0% |
!! | TGATATAAAATTAATTAAAA+AGG | + | chr7.3:45669808-45669827 | None:intergenic | 5.0% |
!!! | TAATTATAATTTTAATGAAA+TGG | + | chr7.3:45667145-45667164 | None:intergenic | 5.0% |
ACCATGGAAGCAATCTCCTC+TGG | + | chr7.3:45666226-45666245 | None:intergenic | 50.0% | |
AGCGTTGCGACCAAAACCAA+TGG | + | chr7.3:45669216-45669235 | None:intergenic | 50.0% | |
ATTGGCACCACGACCATCTA+TGG | + | chr7.3:45669417-45669436 | None:intergenic | 50.0% | |
CACAATCAGCCATCCGCTTT+CGG | + | chr7.3:45669193-45669212 | None:intergenic | 50.0% | |
CACATGTCTTGGCGGAGATT+TGG | - | chr7.3:45667834-45667853 | MS.gene66043:intron | 50.0% | |
CCAACTTCCTAGTGTCTCAG+AGG | - | chr7.3:45670166-45670185 | MS.gene66043:intron | 50.0% | |
CCTACATCACCCAACAAGGT+GGG | - | chr7.3:45668425-45668444 | MS.gene66043:intron | 50.0% | |
CCTCCATCCAAAATGGGAAG+GGG | + | chr7.3:45669552-45669571 | None:intergenic | 50.0% | |
CGAACCATAGCATTCCCAGT+CGG | + | chr7.3:45669524-45669543 | None:intergenic | 50.0% | |
CTACATCACCCAACAAGGTG+GGG | - | chr7.3:45668426-45668445 | MS.gene66043:intron | 50.0% | |
CTATTTGCCGTCGGTCAGAT+CGG | - | chr7.3:45666034-45666053 | MS.gene66043:intron | 50.0% | |
CTGTCCTACATCACCCAACA+AGG | - | chr7.3:45668421-45668440 | MS.gene66043:intron | 50.0% | |
GATGTGGACAGGTGACAAAG+AGG | - | chr7.3:45670514-45670533 | MS.gene66043:intron | 50.0% | |
GGAACTTTAACTGCAGGTGC+TGG | - | chr7.3:45670690-45670709 | MS.gene66043:CDS | 50.0% | |
GGATAAGACCCTCCCCAAAA+TGG | + | chr7.3:45669959-45669978 | None:intergenic | 50.0% | |
GGTTGGAATTGGAGGTCTGA+GGG | - | chr7.3:45670564-45670583 | MS.gene66043:intron | 50.0% | |
GTCCTCCATCCAAAATGGGA+AGG | + | chr7.3:45669554-45669573 | None:intergenic | 50.0% | |
GTGACAAAGAGGGTGGATAC+AGG | - | chr7.3:45670525-45670544 | MS.gene66043:intron | 50.0% | |
GTTATTAAATGTCGCCGGGG+TGG | - | chr7.3:45670714-45670733 | MS.gene66043:CDS | 50.0% | |
TAAGCCGACTGGGAATGCTA+TGG | - | chr7.3:45669517-45669536 | MS.gene66043:intron | 50.0% | |
TACATCACCCAACAAGGTGG+GGG | - | chr7.3:45668427-45668446 | MS.gene66043:intron | 50.0% | |
TACGCAATCACACGGAGAGA+AGG | - | chr7.3:45669090-45669109 | MS.gene66043:intron | 50.0% | |
TAGACACGGGTATTTCCACG+TGG | - | chr7.3:45670288-45670307 | MS.gene66043:intron | 50.0% | |
TCCAGAGGAGATTGCTTCCA+TGG | - | chr7.3:45666222-45666241 | MS.gene66043:intron | 50.0% | |
TCCTACATCACCCAACAAGG+TGG | - | chr7.3:45668424-45668443 | MS.gene66043:intron | 50.0% | |
TGTCTGTTGAGGGATGAGAC+TGG | + | chr7.3:45668810-45668829 | None:intergenic | 50.0% | |
TGTTGAGGGATGAGACTGGT+GGG | + | chr7.3:45668806-45668825 | None:intergenic | 50.0% | |
TTCAGATCCGATCTGACCGA+CGG | + | chr7.3:45666044-45666063 | None:intergenic | 50.0% | |
TTTGGTACAGACGCCGAAAG+CGG | - | chr7.3:45669177-45669196 | MS.gene66043:intron | 50.0% | |
TTTGGTCGCAACGCTATTGG+TGG | - | chr7.3:45669221-45669240 | MS.gene66043:intron | 50.0% | |
! | AGGACAATGGCTGATGGTGA+TGG | - | chr7.3:45669569-45669588 | MS.gene66043:intron | 50.0% |
! | ATTGGAAACGGTAATGGCGG+TGG | + | chr7.3:45669684-45669703 | None:intergenic | 50.0% |
! | TCCCAGTCGGCTTACAATCA+TGG | + | chr7.3:45669511-45669530 | None:intergenic | 50.0% |
! | TTGGGGAGGGTCTTATCCAA+AGG | - | chr7.3:45669961-45669980 | MS.gene66043:intron | 50.0% |
!! | CCTCTGAGACACTAGGAAGT+TGG | + | chr7.3:45670169-45670188 | None:intergenic | 50.0% |
!! | GGTTTTGGTCGCAACGCTAT+TGG | - | chr7.3:45669218-45669237 | MS.gene66043:intron | 50.0% |
!!! | TTGACGGTGCCGTTTTTCCA+TGG | + | chr7.3:45667208-45667227 | None:intergenic | 50.0% |
AAGAGGGTGGATACAGGGTC+CGG | - | chr7.3:45670531-45670550 | MS.gene66043:intron | 55.0% | |
ACAGGGTCCGGAGTATGGAA+GGG | - | chr7.3:45670543-45670562 | MS.gene66043:intron | 55.0% | |
CAACGTAGTACCTTCCGTCG+CGG | + | chr7.3:45669247-45669266 | None:intergenic | 55.0% | |
CCCACCTTGTTGGGTGATGT+AGG | + | chr7.3:45668428-45668447 | None:intergenic | 55.0% | |
CGGATGGCTGATTGTGCCAT+TGG | - | chr7.3:45669197-45669216 | MS.gene66043:intron | 55.0% | |
CTACTTCACCCACCACAACG+AGG | - | chr7.3:45669706-45669725 | MS.gene66043:intron | 55.0% | |
CTGTTGAGGGATGAGACTGG+TGG | + | chr7.3:45668807-45668826 | None:intergenic | 55.0% | |
GGAGCGTACACGTGGCATAA+AGG | - | chr7.3:45665936-45665955 | MS.gene66043:CDS | 55.0% | |
GGATGGAGGACAATGGCTGA+TGG | - | chr7.3:45669563-45669582 | MS.gene66043:intron | 55.0% | |
GGGTTGGAATTGGAGGTCTG+AGG | - | chr7.3:45670563-45670582 | MS.gene66043:intron | 55.0% | |
TACAGGGTCCGGAGTATGGA+AGG | - | chr7.3:45670542-45670561 | MS.gene66043:intron | 55.0% | |
TCAGCACAGTCTGACCCACT+TGG | - | chr7.3:45666623-45666642 | MS.gene66043:CDS | 55.0% | |
TCCATCAGGAAGAGGAGCTG+CGG | - | chr7.3:45670617-45670636 | MS.gene66043:intron | 55.0% | |
TGGACAGGTGACAAAGAGGG+TGG | - | chr7.3:45670518-45670537 | MS.gene66043:intron | 55.0% | |
TGGATACAGGGTCCGGAGTA+TGG | - | chr7.3:45670538-45670557 | MS.gene66043:intron | 55.0% | |
TGGCTTACCCCCACCTTGTT+GGG | + | chr7.3:45668437-45668456 | None:intergenic | 55.0% | |
! | CCCCTTCCCATTTTGGATGG+AGG | - | chr7.3:45669549-45669568 | MS.gene66043:intron | 55.0% |
! | CGTAGCTCCCCTTCCCATTT+TGG | - | chr7.3:45669542-45669561 | MS.gene66043:intron | 55.0% |
! | GCTCCCCTTCCCATTTTGGA+TGG | - | chr7.3:45669546-45669565 | MS.gene66043:intron | 55.0% |
! | GGGCAAGGTATCTGTTGCCT+TGG | + | chr7.3:45670381-45670400 | None:intergenic | 55.0% |
!! | AGAGGTCCCTCTGAGACACT+AGG | + | chr7.3:45670176-45670195 | None:intergenic | 55.0% |
!! | CAAAAGGGTTCTGAGGGGCA+AGG | + | chr7.3:45670396-45670415 | None:intergenic | 55.0% |
CAGCGCCAGCAGTCATCCAT+TGG | + | chr7.3:45669149-45669168 | None:intergenic | 60.0% | |
GCTGGCGCTGTGACAAGCTT+TGG | - | chr7.3:45669159-45669178 | MS.gene66043:intron | 60.0% | |
GGTCCGGAGTATGGAAGGGT+TGG | - | chr7.3:45670547-45670566 | MS.gene66043:intron | 60.0% | |
GTACAGACGCCGAAAGCGGA+TGG | - | chr7.3:45669181-45669200 | MS.gene66043:intron | 60.0% | |
GTGGCTTACCCCCACCTTGT+TGG | + | chr7.3:45668438-45668457 | None:intergenic | 60.0% | |
TCACGGGGTCGTCGTCTCTT+GGG | + | chr7.3:45669277-45669296 | None:intergenic | 60.0% | |
TTCACGGGGTCGTCGTCTCT+TGG | + | chr7.3:45669278-45669297 | None:intergenic | 60.0% | |
! | AACGCTATTGGTGGCCGCGA+CGG | - | chr7.3:45669230-45669249 | MS.gene66043:intron | 60.0% |
! | AGACTGGTGGGTCGGTCATG+TGG | + | chr7.3:45668794-45668813 | None:intergenic | 60.0% |
! | AGTGCCGGGTCTTGGGTTCA+CGG | + | chr7.3:45669294-45669313 | None:intergenic | 60.0% |
! | GACTGGTGGGTCGGTCATGT+GGG | + | chr7.3:45668793-45668812 | None:intergenic | 60.0% |
! | GAGGGATGAGACTGGTGGGT+CGG | + | chr7.3:45668802-45668821 | None:intergenic | 60.0% |
GACCCCGTGAACCCAAGACC+CGG | - | chr7.3:45669287-45669306 | MS.gene66043:intron | 65.0% | |
GCCGCAGCTCCTCTTCCTGA+TGG | + | chr7.3:45670621-45670640 | None:intergenic | 65.0% | |
GTGCCGGGTCTTGGGTTCAC+GGG | + | chr7.3:45669293-45669312 | None:intergenic | 65.0% | |
TGCCGGGTCTTGGGTTCACG+GGG | + | chr7.3:45669292-45669311 | None:intergenic | 65.0% | |
! | CTATTGGTGGCCGCGACGGA+AGG | - | chr7.3:45669234-45669253 | MS.gene66043:intron | 65.0% |
! | GACAGCGTGACGGAGAGTGC+CGG | + | chr7.3:45669309-45669328 | None:intergenic | 65.0% |
!! | ACAGCGTGACGGAGAGTGCC+GGG | + | chr7.3:45669308-45669327 | None:intergenic | 65.0% |
!! | GACGGAGAGTGCCGGGTCTT+GGG | + | chr7.3:45669301-45669320 | None:intergenic | 65.0% |
!! | TGACGGAGAGTGCCGGGTCT+TGG | + | chr7.3:45669302-45669321 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 45665535 | 45670746 | 45665535 | ID=MS.gene66043 |
chr7.3 | mRNA | 45665535 | 45670746 | 45665535 | ID=MS.gene66043.t1;Parent=MS.gene66043 |
chr7.3 | exon | 45670652 | 45670746 | 45670652 | ID=MS.gene66043.t1.exon1;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45670652 | 45670746 | 45670652 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45670430 | 45670492 | 45670430 | ID=MS.gene66043.t1.exon2;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45670430 | 45670492 | 45670430 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45670030 | 45670095 | 45670030 | ID=MS.gene66043.t1.exon3;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45670030 | 45670095 | 45670030 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45666554 | 45667196 | 45666554 | ID=MS.gene66043.t1.exon4;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45666554 | 45667196 | 45666554 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45666290 | 45666393 | 45666290 | ID=MS.gene66043.t1.exon5;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45666290 | 45666393 | 45666290 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45665858 | 45665996 | 45665858 | ID=MS.gene66043.t1.exon6;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45665858 | 45665996 | 45665858 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
chr7.3 | exon | 45665535 | 45665756 | 45665535 | ID=MS.gene66043.t1.exon7;Parent=MS.gene66043.t1 |
chr7.3 | CDS | 45665535 | 45665756 | 45665535 | ID=cds.MS.gene66043.t1;Parent=MS.gene66043.t1 |
Gene Sequence |
Protein sequence |