AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66403

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66403.t1 MTR_6g088885 98.817 507 6 0 1 507 1 507 0.0 1037
MS.gene66403.t1 MTR_8g102340 73.054 501 93 6 1 500 1 460 0.0 725
MS.gene66403.t1 MTR_5g085580 40.858 443 246 3 27 454 25 466 1.32e-119 360
MS.gene66403.t1 MTR_3g065460 40.509 432 245 3 26 454 23 445 1.65e-119 360
MS.gene66403.t1 MTR_4g069940 39.294 453 268 4 7 454 9 459 3.71e-119 358
MS.gene66403.t1 MTR_8g085720 37.600 500 296 5 11 502 7 498 1.18e-118 358
MS.gene66403.t1 MTR_1g031900 39.337 483 280 4 8 486 5 478 1.29e-117 355
MS.gene66403.t1 MTR_4g132280 39.545 483 273 6 24 501 42 510 2.23e-117 355
MS.gene66403.t1 MTR_1g056640 39.514 453 245 4 27 452 38 488 4.91e-117 354
MS.gene66403.t1 MTR_3g116510 40.138 436 258 2 25 459 26 459 1.68e-116 351
MS.gene66403.t1 MTR_1g031900 41.339 433 242 4 25 454 22 445 1.50e-115 350
MS.gene66403.t1 MTR_5g078200 39.741 463 264 6 7 465 5 456 7.54e-115 353
MS.gene66403.t1 MTR_3g083580 34.585 506 300 8 7 499 11 498 2.02e-113 345
MS.gene66403.t1 MTR_7g053500 40.783 434 248 8 28 454 27 458 3.13e-112 340
MS.gene66403.t1 MTR_5g078200 40.509 432 244 5 38 465 1 423 1.01e-110 341
MS.gene66403.t1 MTR_8g012400 39.815 432 252 7 28 454 30 458 1.24e-110 336
MS.gene66403.t1 MTR_1g022160 37.391 460 259 6 26 460 23 478 2.98e-110 336
MS.gene66403.t1 MTR_1g022160 36.543 457 263 5 26 457 23 477 1.36e-106 327
MS.gene66403.t1 MTR_1g022160 36.913 447 255 5 26 447 23 467 3.11e-105 323
MS.gene66403.t1 MTR_7g026340 40.092 434 242 11 27 452 23 446 6.09e-102 313
MS.gene66403.t1 MTR_4g088155 35.667 457 283 6 7 454 3 457 4.81e-100 309
MS.gene66403.t1 MTR_4g083500 37.022 497 282 14 27 501 44 531 1.16e-96 302
MS.gene66403.t1 MTR_7g053500 41.099 382 216 8 80 454 2 381 3.24e-96 296
MS.gene66403.t1 MTR_8g012400 39.737 380 221 7 80 454 2 378 3.48e-94 291
MS.gene66403.t1 MTR_1g077990 45.483 321 172 3 27 346 31 349 9.59e-93 288
MS.gene66403.t1 MTR_3g080410 43.119 327 185 1 24 349 23 349 9.60e-93 287
MS.gene66403.t1 MTR_4g052970 44.037 327 175 3 28 350 30 352 1.35e-91 285
MS.gene66403.t1 MTR_4g010200 40.510 353 208 2 5 355 10 362 2.68e-91 284
MS.gene66403.t1 MTR_4g084480 42.778 360 197 3 28 379 33 391 3.01e-91 284
MS.gene66403.t1 MTR_2g086530 41.379 348 199 3 5 350 6 350 6.36e-91 283
MS.gene66403.t1 MTR_4g084480 42.382 361 199 3 28 387 33 385 8.69e-91 283
MS.gene66403.t1 MTR_2g086530 42.424 330 186 2 22 350 3 329 2.63e-90 281
MS.gene66403.t1 MTR_4g084480 45.625 320 172 2 28 346 26 344 3.19e-90 281
MS.gene66403.t1 MTR_1g022160 41.509 318 184 2 26 341 23 340 2.87e-85 269
MS.gene66403.t1 MTR_3g116510 39.450 327 196 1 133 459 1 325 1.05e-83 262
MS.gene66403.t1 MTR_1g007810 43.396 318 172 5 27 341 16 328 1.95e-83 263
MS.gene66403.t1 MTR_2g019345 41.593 339 195 3 6 343 3 339 7.93e-83 262
MS.gene66403.t1 MTR_4g114850 41.121 321 188 1 28 347 27 347 1.28e-82 261
MS.gene66403.t1 MTR_4g114850 41.121 321 188 1 28 347 27 347 1.70e-82 261
MS.gene66403.t1 MTR_4g114850 41.121 321 188 1 28 347 27 347 2.23e-82 261
MS.gene66403.t1 MTR_1g052430 38.907 311 182 4 27 336 32 335 3.26e-74 240
MS.gene66403.t1 MTR_4g076500 36.570 309 188 2 27 335 78 378 5.41e-73 236
MS.gene66403.t1 MTR_2g034480 37.243 341 199 8 27 362 27 357 7.85e-72 233
MS.gene66403.t1 MTR_4g076255 37.304 319 187 6 27 345 25 330 2.07e-71 231
MS.gene66403.t1 MTR_2g034470 37.538 325 191 7 27 348 30 345 3.41e-71 231
MS.gene66403.t1 MTR_8g092070 31.838 468 283 15 7 454 6 457 6.41e-70 234
MS.gene66403.t1 MTR_4g076570 37.299 311 187 4 27 336 22 325 1.22e-69 227
MS.gene66403.t1 MTR_7g081350 34.627 335 209 6 9 343 11 335 1.88e-69 226
MS.gene66403.t1 MTR_4g076470 34.311 341 211 6 5 345 1 328 6.17e-68 221
MS.gene66403.t1 MTR_2g034440 37.380 313 184 7 27 336 22 325 7.75e-68 221
MS.gene66403.t1 MTR_2g034470 37.224 317 187 7 35 348 3 310 1.12e-66 218
MS.gene66403.t1 MTR_4g076490 34.675 323 199 5 25 347 95 405 1.28e-66 221
MS.gene66403.t1 MTR_4g076430 32.845 341 216 6 5 345 1 328 1.72e-64 213
MS.gene66403.t1 MTR_4g076440 33.138 341 215 6 5 345 1 328 6.75e-64 211
MS.gene66403.t1 MTR_1g010120 31.735 438 274 13 27 454 26 448 3.83e-63 213
MS.gene66403.t1 MTR_1g053320 30.131 458 297 13 6 452 9 454 3.56e-62 211
MS.gene66403.t1 MTR_4g112025 31.304 460 286 17 8 454 14 456 1.25e-61 210
MS.gene66403.t1 MTR_3g095050 30.172 464 291 18 5 454 11 455 1.18e-60 207
MS.gene66403.t1 MTR_3g031770 30.932 472 277 18 27 477 27 470 1.29e-60 207
MS.gene66403.t1 MTR_3g108600 31.072 457 269 16 7 454 16 435 1.68e-60 206
MS.gene66403.t1 MTR_2g027560 30.068 439 286 12 25 455 26 451 1.00e-57 199
MS.gene66403.t1 MTR_7g085390 31.330 466 281 19 1 451 1 442 6.59e-57 197
MS.gene66403.t1 MTR_7g081370 31.230 317 197 5 27 343 28 323 1.42e-56 191
MS.gene66403.t1 MTR_6g032820 30.531 452 274 15 7 438 6 437 6.22e-55 191
MS.gene66403.t1 MTR_5g081720 35.806 310 185 10 43 346 53 354 2.81e-51 179
MS.gene66403.t1 MTR_4g124440 29.295 454 280 19 40 476 41 470 7.55e-51 181
MS.gene66403.t1 MTR_4g134280 31.608 367 233 11 114 474 2 356 1.43e-47 169
MS.gene66403.t1 MTR_8g089400 56.842 95 40 1 365 459 33 126 2.47e-34 127
MS.gene66403.t1 MTR_8g089400 56.842 95 40 1 365 459 53 146 6.02e-34 126
MS.gene66403.t1 MTR_1g116870 48.276 87 43 1 369 455 276 360 3.29e-23 101
MS.gene66403.t1 MTR_5g097420 47.674 86 44 1 369 454 30 114 5.45e-23 94.4
MS.gene66403.t1 MTR_3g048280 45.192 104 55 2 351 454 94 195 8.52e-23 96.7
MS.gene66403.t1 MTR_8g085440 50.000 86 41 1 369 454 32 115 1.20e-21 90.5
MS.gene66403.t1 MTR_5g091650 34.932 146 85 4 364 501 103 246 1.81e-21 94.7
MS.gene66403.t1 MTR_5g091650 44.681 94 50 2 364 457 103 194 8.80e-21 90.5
MS.gene66403.t1 MTR_8g085390 38.983 118 65 2 368 480 29 144 5.44e-20 88.2
MS.gene66403.t1 MTR_8g085420 49.383 81 39 1 369 449 32 110 1.61e-19 85.1
MS.gene66403.t1 MTR_4g079530 35.507 138 82 3 369 506 37 167 1.07e-18 84.0
MS.gene66403.t1 MTR_5g015720 43.182 88 48 2 369 455 329 415 1.22e-17 85.5
MS.gene66403.t1 MTR_2g049670 42.391 92 50 2 368 459 157 245 1.33e-17 84.3
MS.gene66403.t1 MTR_4g079530 40.698 86 50 1 369 454 37 121 3.07e-17 78.6
MS.gene66403.t1 MTR_1g084820 41.304 92 51 2 357 448 408 496 5.44e-17 84.3
MS.gene66403.t1 MTR_1g084820 41.304 92 51 2 357 448 408 496 5.88e-17 84.3
MS.gene66403.t1 MTR_2g072500 41.758 91 49 2 365 454 3 90 9.64e-17 75.9
MS.gene66403.t1 MTR_4g133730 37.931 87 53 1 368 454 27 112 1.19e-16 76.3
MS.gene66403.t1 MTR_7g111600 41.860 86 48 2 369 454 160 243 1.39e-16 80.1
MS.gene66403.t1 MTR_7g111600 41.860 86 48 2 369 454 160 243 1.74e-16 80.5
MS.gene66403.t1 MTR_3g082080 42.500 80 44 1 369 448 157 234 2.11e-16 79.3
MS.gene66403.t1 MTR_7g111600 38.532 109 65 2 346 454 137 243 2.75e-16 80.1
MS.gene66403.t1 MTR_4g036775 34.167 120 74 2 217 336 54 168 3.53e-16 78.2
MS.gene66403.t1 MTR_4g036680 34.167 120 74 2 217 336 54 168 1.24e-15 76.6
MS.gene66403.t1 MTR_4g133735 40.000 85 50 1 368 452 27 110 2.54e-15 72.8
MS.gene66403.t1 MTR_8g085400 43.902 82 41 2 369 450 33 109 2.86e-15 72.4
MS.gene66403.t1 MTR_4g109490 38.372 86 50 2 369 454 24 106 5.23e-15 74.7
MS.gene66403.t1 MTR_8g088120 46.667 75 38 2 380 454 59 131 1.38e-14 73.6
MS.gene66403.t1 MTR_5g044530 38.824 85 50 1 364 448 17 99 1.10e-13 71.6
MS.gene66403.t1 MTR_4g083070 36.782 87 52 2 369 454 21 105 2.39e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66403.t1 AT5G56590 70.870 460 130 4 20 477 19 476 0.0 685
MS.gene66403.t1 AT4G29360 63.780 508 153 7 18 495 28 534 0.0 643
MS.gene66403.t1 AT4G29360 61.509 530 172 8 1 499 1 529 0.0 642
MS.gene66403.t1 AT2G01630 42.609 460 250 5 25 480 21 470 7.93e-128 382
MS.gene66403.t1 AT4G26830 41.943 453 258 5 1 452 1 449 2.20e-126 376
MS.gene66403.t1 AT4G26830 42.558 430 244 3 26 454 28 455 4.12e-126 376
MS.gene66403.t1 AT2G01630 43.560 427 229 4 25 448 21 438 6.22e-125 372
MS.gene66403.t1 AT5G55180 41.898 432 247 4 26 454 26 456 1.61e-123 369
MS.gene66403.t1 AT1G66250 40.947 486 272 7 24 504 29 504 4.02e-122 367
MS.gene66403.t1 AT5G55180 42.019 426 243 4 26 448 26 450 2.25e-121 364
MS.gene66403.t1 AT3G13560 39.956 453 255 5 18 466 17 456 4.01e-120 362
MS.gene66403.t1 AT3G13560 39.956 453 255 5 18 466 17 456 4.01e-120 362
MS.gene66403.t1 AT3G13560 39.956 453 255 5 18 466 17 456 4.01e-120 362
MS.gene66403.t1 AT3G13560 39.956 453 255 5 18 466 17 456 4.01e-120 362
MS.gene66403.t1 AT3G13560 39.956 453 255 5 18 466 17 456 4.01e-120 362
MS.gene66403.t1 AT2G16230 37.787 479 292 4 25 502 23 496 2.01e-119 360
MS.gene66403.t1 AT2G05790 40.225 445 248 5 27 454 25 468 2.12e-119 359
MS.gene66403.t1 AT4G34480 41.860 430 242 3 26 454 25 447 3.91e-118 357
MS.gene66403.t1 AT1G11820 39.004 482 277 6 26 504 43 510 4.40e-116 352
MS.gene66403.t1 AT1G11820 41.315 426 238 4 26 448 43 459 9.47e-113 342
MS.gene66403.t1 AT3G07320 38.194 432 260 6 28 454 26 455 1.30e-103 318
MS.gene66403.t1 AT2G01630 44.000 375 198 4 25 396 21 386 1.59e-103 315
MS.gene66403.t1 AT5G24318 36.923 455 268 9 8 454 12 455 2.58e-102 315
MS.gene66403.t1 AT4G14080 36.902 439 265 7 24 454 39 473 1.42e-100 311
MS.gene66403.t1 AT3G23770 38.041 439 261 6 25 454 35 471 2.52e-100 310
MS.gene66403.t1 AT5G24318 36.283 452 269 9 8 451 12 452 5.62e-99 306
MS.gene66403.t1 AT5G42720 44.023 343 185 3 11 346 5 347 6.59e-98 303
MS.gene66403.t1 AT2G27500 43.768 345 192 2 24 367 26 369 4.79e-96 296
MS.gene66403.t1 AT2G27500 44.248 339 187 2 24 361 26 363 1.29e-95 295
MS.gene66403.t1 AT1G32860 45.031 322 173 3 27 345 29 349 9.60e-95 294
MS.gene66403.t1 AT4G18340 44.606 343 186 3 27 368 34 373 1.05e-94 293
MS.gene66403.t1 AT1G30080 44.476 353 185 3 1 343 1 352 1.09e-94 293
MS.gene66403.t1 AT4G18340 44.606 343 186 3 27 368 34 373 1.91e-94 292
MS.gene66403.t1 AT1G30080 44.476 353 185 3 1 343 1 352 2.35e-94 293
MS.gene66403.t1 AT3G55430 37.615 436 253 14 25 454 27 449 2.98e-94 294
MS.gene66403.t1 AT4G34480 42.815 341 187 3 115 454 3 336 6.19e-91 283
MS.gene66403.t1 AT2G26600 43.558 326 180 2 24 345 28 353 1.71e-89 279
MS.gene66403.t1 AT3G15800 42.857 322 182 2 28 347 44 365 1.16e-86 272
MS.gene66403.t1 AT4G34480 43.260 319 180 1 26 343 25 343 4.02e-86 270
MS.gene66403.t1 AT1G11820 42.202 327 186 1 26 349 43 369 8.02e-86 270
MS.gene66403.t1 AT2G39640 35.045 448 270 10 7 452 12 440 1.26e-84 272
MS.gene66403.t1 AT2G39640 29.508 122 72 2 344 453 423 542 2.13e-14 76.3
MS.gene66403.t1 AT3G61810 42.025 326 175 4 27 346 55 372 1.15e-81 259
MS.gene66403.t1 AT5G42100 41.796 323 183 4 25 343 25 346 3.62e-81 259
MS.gene66403.t1 AT5G24318 39.528 339 196 6 8 343 12 344 4.95e-81 257
MS.gene66403.t1 AT5G42100 41.796 323 183 4 25 343 25 346 6.47e-81 258
MS.gene66403.t1 AT2G27500 44.755 286 156 2 77 361 1 285 1.31e-80 254
MS.gene66403.t1 AT4G16260 38.304 342 201 6 6 346 3 335 5.28e-78 248
MS.gene66403.t1 AT5G24318 38.462 325 185 5 136 454 1 316 1.72e-74 238
MS.gene66403.t1 AT3G57270 37.346 324 193 6 24 345 24 339 2.64e-73 236
MS.gene66403.t1 AT4G16260 38.978 313 181 6 35 346 3 306 2.89e-71 229
MS.gene66403.t1 AT3G57260 35.103 339 201 7 14 345 12 338 3.53e-70 228
MS.gene66403.t1 AT3G57260 35.103 339 201 7 14 345 28 354 7.03e-70 228
MS.gene66403.t1 AT3G57240 36.890 328 193 8 18 345 27 340 4.76e-69 225
MS.gene66403.t1 AT2G26600 43.191 257 142 2 93 345 3 259 2.04e-68 221
MS.gene66403.t1 AT3G46570 39.286 336 191 9 14 343 14 342 2.17e-67 221
MS.gene66403.t1 AT5G20390 36.677 319 192 7 27 343 33 343 6.24e-64 211
MS.gene66403.t1 AT5G20340 35.737 319 195 7 27 343 43 353 1.35e-61 206
MS.gene66403.t1 AT5G18220 30.691 492 291 17 25 500 28 485 3.32e-61 208
MS.gene66403.t1 AT3G24330 30.753 478 291 18 5 463 20 476 3.83e-61 209
MS.gene66403.t1 AT5G58090 31.081 444 282 13 21 454 16 445 2.77e-60 206
MS.gene66403.t1 AT3G04010 30.255 509 305 17 12 502 14 490 4.30e-60 206
MS.gene66403.t1 AT1G77780 34.648 355 217 7 25 379 22 361 1.28e-59 201
MS.gene66403.t1 AT4G31140 29.783 460 291 14 5 454 11 448 2.55e-59 203
MS.gene66403.t1 AT5G20330 35.110 319 197 7 27 343 34 344 5.42e-59 199
MS.gene66403.t1 AT1G33220 35.354 297 184 5 27 322 34 323 2.04e-58 197
MS.gene66403.t1 AT4G17180 31.042 480 287 17 1 465 1 451 6.59e-57 197
MS.gene66403.t1 AT1G77790 32.845 341 220 6 5 343 8 341 1.70e-56 192
MS.gene66403.t1 AT5G64790 29.122 467 302 15 1 454 1 451 7.76e-56 194
MS.gene66403.t1 AT5G58480 30.296 439 275 12 27 454 26 444 1.17e-55 193
MS.gene66403.t1 AT5G20870 29.328 491 301 17 31 500 34 499 7.69e-54 189
MS.gene66403.t1 AT2G19440 30.909 440 272 15 27 452 21 442 4.95e-53 186
MS.gene66403.t1 AT2G19440 30.909 440 272 15 27 452 21 442 4.95e-53 186
MS.gene66403.t1 AT3G55780 34.700 317 195 9 41 351 49 359 8.15e-52 181
MS.gene66403.t1 AT1G64760 29.348 460 287 17 7 452 11 446 1.65e-50 180
MS.gene66403.t1 AT1G64760 29.348 460 287 17 7 452 11 446 1.65e-50 180
MS.gene66403.t1 AT5G20560 32.441 299 195 5 25 322 32 324 2.49e-46 165
MS.gene66403.t1 AT4G05430 52.222 90 42 1 365 454 19 107 9.59e-29 111
MS.gene66403.t1 AT4G05430 52.222 90 42 1 365 454 44 132 1.35e-28 111
MS.gene66403.t1 AT5G67460 27.100 369 205 11 95 455 66 378 2.03e-28 116
MS.gene66403.t1 AT4G05430 53.012 83 38 1 366 448 45 126 1.99e-26 104
MS.gene66403.t1 AT5G67460 27.072 362 200 11 95 448 66 371 9.88e-26 108
MS.gene66403.t1 AT1G66870 39.344 122 62 2 333 454 1 110 2.61e-25 100
MS.gene66403.t1 AT1G66870 48.837 86 43 1 369 454 53 137 6.14e-25 100
MS.gene66403.t1 AT4G16165 36.066 122 66 2 333 454 1 110 4.00e-23 94.7
MS.gene66403.t1 AT1G66852 45.349 86 45 2 369 454 26 109 2.10e-22 92.4
MS.gene66403.t1 AT5G63225 51.724 87 40 1 368 454 24 108 2.18e-22 92.4
MS.gene66403.t1 AT1G66855 45.349 86 46 1 369 454 26 110 4.09e-22 91.7
MS.gene66403.t1 AT4G09462 50.000 86 41 1 369 454 29 112 5.21e-22 91.7
MS.gene66403.t1 AT4G09465 48.837 86 42 1 369 454 31 114 1.11e-21 90.9
MS.gene66403.t1 AT4G09090 46.067 89 46 1 367 455 29 115 1.30e-21 90.5
MS.gene66403.t1 AT4G09467 48.837 86 42 1 369 454 31 114 1.40e-21 90.5
MS.gene66403.t1 AT4G09464 48.837 86 42 1 369 454 31 114 1.40e-21 90.5
MS.gene66403.t1 AT1G79480 42.391 92 51 1 363 454 305 394 6.48e-21 95.1
MS.gene66403.t1 AT2G30933 36.765 136 80 4 369 501 82 214 6.58e-21 92.0
MS.gene66403.t1 AT1G79480 44.186 86 46 1 369 454 310 393 6.85e-21 95.1
MS.gene66403.t1 AT5G63240 41.414 99 57 1 358 455 29 127 7.32e-21 89.0
MS.gene66403.t1 AT5G63250 42.424 99 56 1 358 455 31 129 8.26e-21 89.0
MS.gene66403.t1 AT4G09466 46.512 86 44 1 369 454 31 114 4.17e-20 86.3
MS.gene66403.t1 AT4G13600 36.607 112 66 2 369 480 61 167 1.68e-19 87.8
MS.gene66403.t1 AT5G35740 40.426 94 54 2 362 454 23 115 2.84e-19 84.0
MS.gene66403.t1 AT1G09460 45.745 94 46 3 366 459 134 222 5.48e-19 88.6
MS.gene66403.t1 AT1G29380 45.977 87 45 2 368 454 147 231 1.13e-18 87.4
MS.gene66403.t1 AT1G29380 45.977 87 45 2 368 454 147 231 1.57e-18 85.9
MS.gene66403.t1 AT2G04910 40.230 87 51 1 368 454 14 99 2.39e-18 80.9
MS.gene66403.t1 AT3G58100 35.833 120 75 2 369 487 41 159 4.90e-18 82.4
MS.gene66403.t1 AT1G29380 48.148 81 40 2 368 448 147 225 6.40e-18 83.2
MS.gene66403.t1 AT1G29380 48.148 81 40 2 368 448 147 225 6.40e-18 83.2
MS.gene66403.t1 AT1G78520 36.275 102 62 1 353 454 16 114 9.53e-18 79.7
MS.gene66403.t1 AT3G58100 35.833 120 75 2 369 487 117 235 1.33e-17 83.2
MS.gene66403.t1 AT5G53600 41.860 86 47 1 369 454 29 111 1.51e-17 79.0
MS.gene66403.t1 AT2G29735 39.362 94 53 2 363 454 25 116 2.17e-17 78.6
MS.gene66403.t1 AT5G63230 42.529 87 48 1 368 454 25 109 3.19e-17 77.8
MS.gene66403.t1 AT2G30933 43.750 80 43 2 369 448 82 159 4.56e-17 79.0
MS.gene66403.t1 AT2G30933 43.750 80 43 2 369 448 82 159 4.56e-17 79.0
MS.gene66403.t1 AT5G53610 45.238 84 43 1 369 452 28 108 7.17e-17 77.0
MS.gene66403.t1 AT5G61130 38.372 86 51 1 369 454 21 104 1.19e-16 79.0
MS.gene66403.t1 AT1G18650 37.500 96 57 2 359 454 12 104 2.13e-16 77.8
MS.gene66403.t1 AT2G04910 40.741 81 47 1 368 448 14 93 2.20e-16 75.9
MS.gene66403.t1 AT2G43670 36.842 95 57 1 360 454 26 117 2.54e-16 75.9
MS.gene66403.t1 AT1G18650 37.500 96 57 2 359 454 12 104 4.96e-16 75.1
MS.gene66403.t1 AT5G08000 30.833 120 81 1 366 485 37 154 5.86e-14 71.6
MS.gene66403.t1 AT5G08000 36.047 86 53 1 369 454 21 104 4.76e-13 68.6
MS.gene66403.t1 AT1G26450 41.176 68 38 1 375 442 26 91 1.14e-11 64.3
MS.gene66403.t1 AT1G69295 37.209 86 50 3 369 453 21 103 8.37e-11 62.4

Find 109 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTACAAAATGCGATAAAT+TGG 0.140800 6.3:+82789740 MS.gene66403:CDS
TCTGATGTTGCCTGTAGTTT+TGG 0.236535 6.3:+82789889 MS.gene66403:CDS
AATTGGGCTTGTGGTACTTC+TGG 0.267372 6.3:+82789757 MS.gene66403:CDS
TTTCATTGTTCAATGAAAAT+AGG 0.269193 6.3:+82789539 MS.gene66403:CDS
AACTGCATCTACATGAAAAC+TGG 0.275506 6.3:+82790234 MS.gene66403:CDS
GTCCGATATCCAAAAGAAAA+AGG 0.308137 6.3:-82790499 None:intergenic
GTCTCGATCGTTCCCTCCTT+CGG 0.317267 6.3:+82789090 MS.gene66403:CDS
TTATATGTTTGTGCATTATC+AGG 0.317579 6.3:-82789439 None:intergenic
AATAGCTATTACCAGCAAAA+TGG 0.320368 6.3:+82789862 MS.gene66403:CDS
GGATACAGATCGATCATAAA+AGG 0.324449 6.3:-82789184 None:intergenic
TATTATTACTTGCCAAAGTT+TGG 0.347462 6.3:-82790385 None:intergenic
GCCAAGTGTCTGCATTAGTT+TGG 0.355290 6.3:-82788874 None:intergenic
GAGTCACGATATGCGTAATA+AGG 0.369011 6.3:-82789205 None:intergenic
ACCAACTGTGACACCTTATC+AGG 0.370353 6.3:-82788722 None:intergenic
CTAGGCTGTACACGTTTGTT+AGG 0.371470 6.3:-82789609 None:intergenic
AACGGAAGCAAATCTAGATT+TGG 0.372532 6.3:-82788842 None:intergenic
CAACTTCAAATGGAACAAAA+TGG 0.373327 6.3:+82789686 MS.gene66403:CDS
GTATAAAGCAAACCAGTGTT+AGG 0.380170 6.3:-82789286 None:intergenic
CTCTCCAACCAAAGTGTCCT+TGG 0.385377 6.3:+82789225 MS.gene66403:CDS
CTTACAAAATGCGATAAATT+GGG 0.385650 6.3:+82789741 MS.gene66403:CDS
GTTTGGAATCTGAAAGGAAC+TGG 0.397266 6.3:+82789569 MS.gene66403:CDS
TGAAAATAGGAAGCCAGGTT+TGG 0.399211 6.3:+82789552 MS.gene66403:CDS
GAAATTCCAGCAGTGGCTTA+AGG 0.400304 6.3:-82789144 None:intergenic
CCCCGGCTTTGCAGGTGTAC+CGG 0.405531 6.3:-82789494 None:intergenic
CATGTAGATGCAGTTGTCAT+AGG 0.410440 6.3:-82790226 None:intergenic
GCTACTAGTTCAACTTCAAA+TGG 0.417514 6.3:+82789676 MS.gene66403:CDS
GCATCTGCGGTCATGTCAAC+AGG 0.422571 6.3:-82789649 None:intergenic
GGAGTAGCAGCTGTCTCCTT+AGG 0.430476 6.3:-82789418 None:intergenic
TTCGGGACTTTCTGTAACTT+CGG 0.431562 6.3:-82788957 None:intergenic
AACCGGTACACCTGCAAAGC+CGG 0.434168 6.3:+82789492 MS.gene66403:CDS
TTCAATGAAAATAGGAAGCC+AGG 0.435657 6.3:+82789547 MS.gene66403:CDS
GATAACATGTCTTATCAGAT+TGG 0.437839 6.3:-82789464 None:intergenic
TTCCTTTCAGATTCCAAACC+TGG 0.438368 6.3:-82789565 None:intergenic
GACTGGTGTACTTGTTGATA+AGG 0.445488 6.3:+82789915 MS.gene66403:CDS
GTTTCCAGTACTCATTCCCT+TGG 0.453975 6.3:+82789061 MS.gene66403:CDS
CTGTACACGTTTGTTAGGTC+CGG 0.458800 6.3:-82789604 None:intergenic
CGATCGTTCCCTCCTTCGGC+TGG 0.460974 6.3:+82789094 MS.gene66403:CDS
ACCGGTACACCTGCAAAGCC+GGG 0.466058 6.3:+82789493 MS.gene66403:CDS
GTGCAGAACTAACCAAACTT+TGG 0.474451 6.3:+82790373 MS.gene66403:intron
AAAGTCATGGTAACCGAGAC+AGG 0.476137 6.3:+82789376 MS.gene66403:CDS
AACTCCAAGGGAATGAGTAC+TGG 0.477506 6.3:-82789065 None:intergenic
GACAGTTATGTATGTGATCT+TGG 0.481677 6.3:-82788930 None:intergenic
TTATTTCCAGATTGTTGCTA+CGG 0.485694 6.3:+82788650 MS.gene66403:intron
TGCATAGTCCAAGGACACTT+TGG 0.486002 6.3:-82789233 None:intergenic
ACCGGCGTCGAACTTATGAT+TGG 0.486069 6.3:+82788815 MS.gene66403:CDS
TGACCTGCCTCCACCTGATA+AGG 0.493506 6.3:+82788709 MS.gene66403:CDS
AGACATGTTATCAATGAAAC+CGG 0.498567 6.3:+82789475 MS.gene66403:CDS
ATCTTGGTGGCTGGATAGTA+AGG 0.498877 6.3:-82788914 None:intergenic
GACCTCGTCCAGTAAAATCT+AGG 0.500092 6.3:-82789627 None:intergenic
ACTTCTTTGCTTGAGGAGGA+TGG 0.501780 6.3:-82790434 None:intergenic
TTTCGAAGGCCAACCTGTCT+CGG 0.507082 6.3:-82789389 None:intergenic
TATTTCCAGATTGTTGCTAC+GGG 0.509756 6.3:+82788651 MS.gene66403:intron
GAACTGGGGAATAGTTTATC+CGG 0.510770 6.3:+82789585 MS.gene66403:CDS
TTTCAGAACGATTAAAGTCA+TGG 0.511255 6.3:+82789363 MS.gene66403:CDS
TCATTTCCTTAAGCCACTGC+TGG 0.515706 6.3:+82789138 MS.gene66403:CDS
GCCACTGCTGGAATTTCTTG+CGG 0.518386 6.3:+82789150 MS.gene66403:CDS
CTTGCAGCACTCAAGAAAGC+TGG 0.520860 6.3:+82789019 MS.gene66403:CDS
GCATGCGAGACTAAGTTATC+CGG 0.533664 6.3:-82789826 None:intergenic
GGCTCAAAACAAGGCTGGCT+AGG 0.534132 6.3:-82789805 None:intergenic
ACCAGTCCCTCCAAAACTAC+AGG 0.542420 6.3:-82789899 None:intergenic
TAGTCCAAGGACACTTTGGT+TGG 0.543887 6.3:-82789229 None:intergenic
ACACCTTATCAGGTGGAGGC+AGG 0.545767 6.3:-82788712 None:intergenic
GCAAGGACATTAGTCATGGC+TGG 0.545995 6.3:-82789001 None:intergenic
TCCGCAAGAAATTCCAGCAG+TGG 0.555308 6.3:-82789151 None:intergenic
TATCCGGCTCAAAACAAGGC+TGG 0.556154 6.3:-82789810 None:intergenic
GAAGTTATTGATCCTAACAC+TGG 0.557705 6.3:+82789274 MS.gene66403:CDS
GTAGACTTCTTTGCTTGAGG+AGG 0.562432 6.3:-82790438 None:intergenic
GCCTTCGAAAGGTTCACCTA+AGG 0.564951 6.3:+82789402 MS.gene66403:CDS
TTGTGGTACTTCTGGAAATG+TGG 0.570623 6.3:+82789765 MS.gene66403:CDS
TCCAAACTAATGCAGACACT+TGG 0.571386 6.3:+82788873 MS.gene66403:CDS
AAGTTATCCGGCTCAAAACA+AGG 0.571467 6.3:-82789814 None:intergenic
ATGTATGTGATCTTGGTGGC+TGG 0.572695 6.3:-82788923 None:intergenic
TAGACGTCTAGCTCTTCCCC+CGG 0.573992 6.3:-82789511 None:intergenic
CAGCTTTCTTGAGTGCTGCA+AGG 0.575770 6.3:-82789018 None:intergenic
AGGATCAATAACTTCGGAGG+AGG 0.583202 6.3:-82789266 None:intergenic
TCCTTAGGTGAACCTTTCGA+AGG 0.584583 6.3:-82789403 None:intergenic
ACTGCATCTACATGAAAACT+GGG 0.585590 6.3:+82790235 MS.gene66403:CDS
TAAAAGCACCAGCCGAAGGA+GGG 0.585860 6.3:-82789102 None:intergenic
TTAAAAGCACCAGCCGAAGG+AGG 0.586198 6.3:-82789103 None:intergenic
GAGACAGGTTGGCCTTCGAA+AGG 0.589766 6.3:+82789391 MS.gene66403:CDS
TGAGTAGACTTCTTTGCTTG+AGG 0.590263 6.3:-82790441 None:intergenic
CCGGTACACCTGCAAAGCCG+GGG 0.591828 6.3:+82789494 MS.gene66403:CDS
CTATTAAAAGCACCAGCCGA+AGG 0.592401 6.3:-82789106 None:intergenic
TGGTGGCTGGATAGTAAGGA+AGG 0.592958 6.3:-82788910 None:intergenic
ACCTGATAAGGTGTCACAGT+TGG 0.594346 6.3:+82788721 MS.gene66403:CDS
TAGAGAGAACAATGGCAAGA+GGG 0.597917 6.3:+82787266 None:intergenic
AACTGTGACACCTTATCAGG+TGG 0.598360 6.3:-82788719 None:intergenic
AGCCAGGTTTGGAATCTGAA+AGG 0.606292 6.3:+82789563 MS.gene66403:CDS
CGATCGAGACAAAACTCCAA+GGG 0.611926 6.3:-82789077 None:intergenic
ATAGAGAGAACAATGGCAAG+AGG 0.613986 6.3:+82787265 None:intergenic
ACTAGTAGCATTTGCATCTG+CGG 0.616757 6.3:-82789662 None:intergenic
TGTGACACCTTATCAGGTGG+AGG 0.617208 6.3:-82788716 None:intergenic
TCATGGTAACCGAGACAGGT+TGG 0.619747 6.3:+82789380 MS.gene66403:CDS
TCTTTGCTTGAGGAGGATGG+AGG 0.619966 6.3:-82790431 None:intergenic
TTTGGAATCTGAAAGGAACT+GGG 0.623413 6.3:+82789570 MS.gene66403:CDS
CTCAAACAATGCATAGTCCA+AGG 0.625466 6.3:-82789242 None:intergenic
AATGCGATAAATTGGGCTTG+TGG 0.631670 6.3:+82789748 MS.gene66403:CDS
TTAGTTTGGAACTGAGAGAA+CGG 0.632833 6.3:-82788860 None:intergenic
AGTGTTAGGATCAATAACTT+CGG 0.634976 6.3:-82789272 None:intergenic
CATGGCTGGCACAACTAATG+CGG 0.643202 6.3:-82788987 None:intergenic
ACGATCGAGACAAAACTCCA+AGG 0.647815 6.3:-82789078 None:intergenic
TCCAATCATAAGTTCGACGC+CGG 0.648715 6.3:-82788816 None:intergenic
GTTAGGATCAATAACTTCGG+AGG 0.650725 6.3:-82789269 None:intergenic
CGGTACACCTGCAAAGCCGG+GGG 0.653266 6.3:+82789495 MS.gene66403:CDS
AAGATCACATACATAACTGT+CGG 0.658420 6.3:+82788932 MS.gene66403:CDS
TGCTGCAAGGACATTAGTCA+TGG 0.668003 6.3:-82789005 None:intergenic
TTTGGCAAGTAATAATACAA+CGG 0.676947 6.3:+82790391 MS.gene66403:CDS
AGTTATGTATGTGATCTTGG+TGG 0.696411 6.3:-82788927 None:intergenic
TTGGAATCTGAAAGGAACTG+GGG 0.718389 6.3:+82789571 MS.gene66403:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAGTTATTTATGTT+TGG + chr6.3:82787986-82788005 MS.gene66403:intron 10.0%
!! ATAATTCAATGTAATTATAT+GGG - chr6.3:82787856-82787875 None:intergenic 10.0%
!!! TGTAAAAAAAACTATATTTT+TGG + chr6.3:82788202-82788221 MS.gene66403:intron 10.0%
!! CATAATTCAATGTAATTATA+TGG - chr6.3:82787857-82787876 None:intergenic 15.0%
!! TTTCTTCTATTTGATATTTA+TGG + chr6.3:82788586-82788605 MS.gene66403:intron 15.0%
!!! TTTTAGGTTTAAATATGTTA+TGG + chr6.3:82790035-82790054 MS.gene66403:intron 15.0%
!! AAAAAAACTGAAAAATGGAA+AGG - chr6.3:82789979-82789998 None:intergenic 20.0%
!! ATACGAAAAAAACTGAAAAA+TGG - chr6.3:82789984-82790003 None:intergenic 20.0%
!! GAAAATATTGCATATTTACA+GGG - chr6.3:82790062-82790081 None:intergenic 20.0%
!! TTTCATTGTTCAATGAAAAT+AGG + chr6.3:82789539-82789558 MS.gene66403:CDS 20.0%
!!! AGATTTTCTCAAATTATTAG+CGG + chr6.3:82787877-82787896 MS.gene66403:intron 20.0%
!!! TTTTAGTTAATCATGCTAAA+TGG - chr6.3:82788255-82788274 None:intergenic 20.0%
!!! TTTTCGTATACTTATCTTTT+CGG + chr6.3:82789995-82790014 MS.gene66403:intron 20.0%
! AAAAAAATAGCAAGGACAAA+TGG - chr6.3:82790084-82790103 None:intergenic 25.0%
! AAATCATCTACACATATTAC+AGG - chr6.3:82790139-82790158 None:intergenic 25.0%
! AAATGGAACAAAAGTAGTTT+AGG - chr6.3:82788238-82788257 None:intergenic 25.0%
! AAGGCAAATTAATTAAGTGA+TGG - chr6.3:82789960-82789979 None:intergenic 25.0%
! ACTTACAAAATGCGATAAAT+TGG + chr6.3:82789740-82789759 MS.gene66403:CDS 25.0%
! AGGCAAATTAATTAAGTGAT+GGG - chr6.3:82789959-82789978 None:intergenic 25.0%
! ATAATCAGTTTCATTTCATG+TGG + chr6.3:82787681-82787700 MS.gene66403:intron 25.0%
! CAAAGATGAACAAATTTATC+AGG - chr6.3:82790110-82790129 None:intergenic 25.0%
! CTTACAAAATGCGATAAATT+GGG + chr6.3:82789741-82789760 MS.gene66403:CDS 25.0%
! CTTCAGTCTTAATAATGATA+AGG - chr6.3:82790320-82790339 None:intergenic 25.0%
! GGAAAATATTGCATATTTAC+AGG - chr6.3:82790063-82790082 None:intergenic 25.0%
! TAGACATTAATCTCATTAAG+TGG + chr6.3:82787653-82787672 MS.gene66403:intron 25.0%
! TATTATTACTTGCCAAAGTT+TGG - chr6.3:82790388-82790407 None:intergenic 25.0%
! TATTCAAAATCTATGAAGCA+CGG - chr6.3:82787927-82787946 None:intergenic 25.0%
! TTATATGTTTGTGCATTATC+AGG - chr6.3:82789442-82789461 None:intergenic 25.0%
! TTCAATGTAATTATATGGGT+CGG - chr6.3:82787852-82787871 None:intergenic 25.0%
! TTTATGGAAAACATGAGAAA+TGG + chr6.3:82787566-82787585 MS.gene66403:intron 25.0%
! TTTGGCAAGTAATAATACAA+CGG + chr6.3:82790391-82790410 MS.gene66403:CDS 25.0%
!! AAAACAAAGCTTTGTAACAT+CGG + chr6.3:82788271-82788290 MS.gene66403:intron 25.0%
!! AACCAACAAAGAAATTTTCA+AGG - chr6.3:82790271-82790290 None:intergenic 25.0%
!! AGTTTGTTCAGTAAGAAAAA+CGG - chr6.3:82790187-82790206 None:intergenic 25.0%
!! ATTTCTCATGTTTTCCATAA+AGG - chr6.3:82787567-82787586 None:intergenic 25.0%
!! TTTCTCATGTTTTCCATAAA+GGG - chr6.3:82787566-82787585 None:intergenic 25.0%
!!! ATTTGTCCTTGCTATTTTTT+TGG + chr6.3:82790083-82790102 MS.gene66403:intron 25.0%
!!! TGCAATTTATTTTGCGTTAA+CGG + chr6.3:82789333-82789352 MS.gene66403:CDS 25.0%
AAATGGAAGACTTCTAAGTT+TGG + chr6.3:82787583-82787602 MS.gene66403:intron 30.0%
AAGATCACATACATAACTGT+CGG + chr6.3:82788932-82788951 MS.gene66403:CDS 30.0%
AATAGCTATTACCAGCAAAA+TGG + chr6.3:82789862-82789881 MS.gene66403:CDS 30.0%
AGACATGTTATCAATGAAAC+CGG + chr6.3:82789475-82789494 MS.gene66403:CDS 30.0%
AGGCGTAATACAACAATTTA+CGG - chr6.3:82790300-82790319 None:intergenic 30.0%
AGTGTTAGGATCAATAACTT+CGG - chr6.3:82789275-82789294 None:intergenic 30.0%
CAACTTCAAATGGAACAAAA+TGG + chr6.3:82789686-82789705 MS.gene66403:CDS 30.0%
GATAACATGTCTTATCAGAT+TGG - chr6.3:82789467-82789486 None:intergenic 30.0%
GTCCTTGAAAATTTCTTTGT+TGG + chr6.3:82790266-82790285 MS.gene66403:intron 30.0%
TAACTCACATTTGAGAGATT+TGG + chr6.3:82788170-82788189 MS.gene66403:intron 30.0%
TTATTTCCAGATTGTTGCTA+CGG + chr6.3:82788650-82788669 MS.gene66403:intron 30.0%
TTTCAGAACGATTAAAGTCA+TGG + chr6.3:82789363-82789382 MS.gene66403:CDS 30.0%
TTTGACTAATGACATTGACA+TGG - chr6.3:82788316-82788335 None:intergenic 30.0%
! AACATCGGTTAAGAATTTGT+TGG + chr6.3:82788286-82788305 MS.gene66403:intron 30.0%
! AACTAATGCGGAAATGTTTT+CGG - chr6.3:82788978-82788997 None:intergenic 30.0%
! ACTTTTTGTTGCATGTTTCT+TGG + chr6.3:82787461-82787480 MS.gene66403:intron 30.0%
! CTAAAATCTTTTGCAAACAC+CGG + chr6.3:82788797-82788816 MS.gene66403:CDS 30.0%
! CTCCTTTTTCTTTTGGATAT+CGG + chr6.3:82790497-82790516 MS.gene66403:CDS 30.0%
! GATCTTTCTCCTTTTTCTTT+TGG + chr6.3:82790490-82790509 MS.gene66403:CDS 30.0%
! TACTTTTGTTGCATGTTTCT+TGG + chr6.3:82787389-82787408 MS.gene66403:intron 30.0%
! TTTGGAACTAGATAGAAGAT+AGG + chr6.3:82787601-82787620 MS.gene66403:intron 30.0%
!!! AGCTATTGCATGCTTTTTTT+AGG + chr6.3:82790019-82790038 MS.gene66403:intron 30.0%
!!! AGTTTTGTTGGAATTTGCTA+TGG + chr6.3:82788674-82788693 MS.gene66403:CDS 30.0%
AACGGAAGCAAATCTAGATT+TGG - chr6.3:82788845-82788864 None:intergenic 35.0%
AACTGCATCTACATGAAAAC+TGG + chr6.3:82790234-82790253 MS.gene66403:CDS 35.0%
ACTGCATCTACATGAAAACT+GGG + chr6.3:82790235-82790254 MS.gene66403:CDS 35.0%
AGTTATGTATGTGATCTTGG+TGG - chr6.3:82788930-82788949 None:intergenic 35.0%
ATGGAACAAATGTGGTTGTA+GGG - chr6.3:82788408-82788427 None:intergenic 35.0%
CACTCGAATGAATGTAATGT+TGG + chr6.3:82788477-82788496 MS.gene66403:intron 35.0%
CGAATGAATGTAATGTTGGT+TGG + chr6.3:82788481-82788500 MS.gene66403:intron 35.0%
GAAGTTATTGATCCTAACAC+TGG + chr6.3:82789274-82789293 MS.gene66403:CDS 35.0%
GACAGTTATGTATGTGATCT+TGG - chr6.3:82788933-82788952 None:intergenic 35.0%
GCTACTAGTTCAACTTCAAA+TGG + chr6.3:82789676-82789695 MS.gene66403:CDS 35.0%
GGATACAGATCGATCATAAA+AGG - chr6.3:82789187-82789206 None:intergenic 35.0%
GTATAAAGCAAACCAGTGTT+AGG - chr6.3:82789289-82789308 None:intergenic 35.0%
GTCCGATATCCAAAAGAAAA+AGG - chr6.3:82790502-82790521 None:intergenic 35.0%
TACATTCATTCGAGTGAAAC+TGG - chr6.3:82788473-82788492 None:intergenic 35.0%
TATTTCCAGATTGTTGCTAC+GGG + chr6.3:82788651-82788670 MS.gene66403:intron 35.0%
TCAGGACCAAAAAAATAGCA+AGG - chr6.3:82790092-82790111 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+TGG + chr6.3:82787883-82787902 MS.gene66403:intron 35.0%
TGATGGGATATGAACATACT+TGG - chr6.3:82789943-82789962 None:intergenic 35.0%
TGTCACTATCGTATGAATGT+TGG - chr6.3:82788056-82788075 None:intergenic 35.0%
TTCAATGAAAATAGGAAGCC+AGG + chr6.3:82789547-82789566 MS.gene66403:CDS 35.0%
TTTATGTTTGGATACACTCG+TGG + chr6.3:82787998-82788017 MS.gene66403:intron 35.0%
! ACTAATGCGGAAATGTTTTC+GGG - chr6.3:82788977-82788996 None:intergenic 35.0%
! ACTACATGGTTGGTTAATGA+TGG - chr6.3:82787722-82787741 None:intergenic 35.0%
! CTTGATTTTGAACTGAAGCA+CGG + chr6.3:82787768-82787787 MS.gene66403:intron 35.0%
! TCAGTTTTGCTTATGCTTCT+TGG + chr6.3:82787313-82787332 MS.gene66403:CDS 35.0%
! TTAGTTTGGAACTGAGAGAA+CGG - chr6.3:82788863-82788882 None:intergenic 35.0%
! TTTGGAATCTGAAAGGAACT+GGG + chr6.3:82789570-82789589 MS.gene66403:CDS 35.0%
!! GTTAAGCTTGTTACCCTTTA+TGG + chr6.3:82787550-82787569 MS.gene66403:intron 35.0%
AAGTTATCCGGCTCAAAACA+AGG - chr6.3:82789817-82789836 None:intergenic 40.0%
AATGCGATAAATTGGGCTTG+TGG + chr6.3:82789748-82789767 MS.gene66403:CDS 40.0%
ACTAGTAGCATTTGCATCTG+CGG - chr6.3:82789665-82789684 None:intergenic 40.0%
ATAACCGAACACACACTACA+TGG - chr6.3:82787736-82787755 None:intergenic 40.0%
CATGTAGATGCAGTTGTCAT+AGG - chr6.3:82790229-82790248 None:intergenic 40.0%
CTCAAACAATGCATAGTCCA+AGG - chr6.3:82789245-82789264 None:intergenic 40.0%
GAACTGGGGAATAGTTTATC+CGG + chr6.3:82789585-82789604 MS.gene66403:CDS 40.0%
GAGTCACGATATGCGTAATA+AGG - chr6.3:82789208-82789227 None:intergenic 40.0%
GATGGAACAAATGTGGTTGT+AGG - chr6.3:82788409-82788428 None:intergenic 40.0%
GTAATTATATGGGTCGGTGT+CGG - chr6.3:82787846-82787865 None:intergenic 40.0%
GTGCAGAACTAACCAAACTT+TGG + chr6.3:82790373-82790392 MS.gene66403:intron 40.0%
GTTAGGATCAATAACTTCGG+AGG - chr6.3:82789272-82789291 None:intergenic 40.0%
TCCAAACTAATGCAGACACT+TGG + chr6.3:82788873-82788892 MS.gene66403:CDS 40.0%
TCGTGGACACTTAAGTTTGA+AGG + chr6.3:82788015-82788034 MS.gene66403:intron 40.0%
TGAAAATAGGAAGCCAGGTT+TGG + chr6.3:82789552-82789571 MS.gene66403:CDS 40.0%
TGAGTAGACTTCTTTGCTTG+AGG - chr6.3:82790444-82790463 None:intergenic 40.0%
TGGAACAAATGTGGTTGTAG+GGG - chr6.3:82788407-82788426 None:intergenic 40.0%
TTCCTTTCAGATTCCAAACC+TGG - chr6.3:82789568-82789587 None:intergenic 40.0%
TTCGGGACTTTCTGTAACTT+CGG - chr6.3:82788960-82788979 None:intergenic 40.0%
TTGGAATCTGAAAGGAACTG+GGG + chr6.3:82789571-82789590 MS.gene66403:CDS 40.0%
! AAGAGGGTTTTGCTTCATCT+TGG + chr6.3:82787282-82787301 MS.gene66403:CDS 40.0%
! GACTGGTGTACTTGTTGATA+AGG + chr6.3:82789915-82789934 MS.gene66403:CDS 40.0%
! GTGTACAGCCTAGATTTTAC+TGG + chr6.3:82789619-82789638 MS.gene66403:CDS 40.0%
! GTTTGGAATCTGAAAGGAAC+TGG + chr6.3:82789569-82789588 MS.gene66403:CDS 40.0%
! TCTGATGTTGCCTGTAGTTT+TGG + chr6.3:82789889-82789908 MS.gene66403:CDS 40.0%
! TTGTGGTACTTCTGGAAATG+TGG + chr6.3:82789765-82789784 MS.gene66403:CDS 40.0%
!! GGTTAGTTCTGCACAAAAAC+AGG - chr6.3:82790367-82790386 None:intergenic 40.0%
!!! ATGTTGCCTGTAGTTTTGGA+GGG + chr6.3:82789893-82789912 MS.gene66403:CDS 40.0%
AAACTCCCGTAGCAACAATC+TGG - chr6.3:82788659-82788678 None:intergenic 45.0%
AAAGTCATGGTAACCGAGAC+AGG + chr6.3:82789376-82789395 MS.gene66403:CDS 45.0%
AACTCCAAGGGAATGAGTAC+TGG - chr6.3:82789068-82789087 None:intergenic 45.0%
AACTGTGACACCTTATCAGG+TGG - chr6.3:82788722-82788741 None:intergenic 45.0%
AATCTATGAAGCACGGACAC+TGG - chr6.3:82787920-82787939 None:intergenic 45.0%
AATTACAGGTGTCCCGTTGT+CGG + chr6.3:82787801-82787820 MS.gene66403:intron 45.0%
AATTGGGCTTGTGGTACTTC+TGG + chr6.3:82789757-82789776 MS.gene66403:CDS 45.0%
ACCAACTGTGACACCTTATC+AGG - chr6.3:82788725-82788744 None:intergenic 45.0%
ACGATCGAGACAAAACTCCA+AGG - chr6.3:82789081-82789100 None:intergenic 45.0%
ACTTCTTTGCTTGAGGAGGA+TGG - chr6.3:82790437-82790456 None:intergenic 45.0%
AGGATCAATAACTTCGGAGG+AGG - chr6.3:82789269-82789288 None:intergenic 45.0%
CATTCGAGTGAAACTGGACT+CGG - chr6.3:82788467-82788486 None:intergenic 45.0%
CCAACCATGTAGTGTGTGTT+CGG + chr6.3:82787729-82787748 MS.gene66403:intron 45.0%
CCACATTTGTTCCATCGACA+AGG + chr6.3:82788413-82788432 MS.gene66403:intron 45.0%
CCTTGTCGATGGAACAAATG+TGG - chr6.3:82788416-82788435 None:intergenic 45.0%
CGATCGAGACAAAACTCCAA+GGG - chr6.3:82789080-82789099 None:intergenic 45.0%
CTAGGCTGTACACGTTTGTT+AGG - chr6.3:82789612-82789631 None:intergenic 45.0%
GAAATTCCAGCAGTGGCTTA+AGG - chr6.3:82789147-82789166 None:intergenic 45.0%
GACCTCGTCCAGTAAAATCT+AGG - chr6.3:82789630-82789649 None:intergenic 45.0%
GCATGCGAGACTAAGTTATC+CGG - chr6.3:82789829-82789848 None:intergenic 45.0%
GCCAAGTGTCTGCATTAGTT+TGG - chr6.3:82788877-82788896 None:intergenic 45.0%
GTAGACTTCTTTGCTTGAGG+AGG - chr6.3:82790441-82790460 None:intergenic 45.0%
GTAGTGTGTGTTCGGTTATG+CGG + chr6.3:82787737-82787756 MS.gene66403:intron 45.0%
GTTTCCAGTACTCATTCCCT+TGG + chr6.3:82789061-82789080 MS.gene66403:CDS 45.0%
TAAACCCTATGAGACACCGT+CGG - chr6.3:82788152-82788171 None:intergenic 45.0%
TAGTCCAAGGACACTTTGGT+TGG - chr6.3:82789232-82789251 None:intergenic 45.0%
TCAGTCAACGACTAAGTCAG+TGG - chr6.3:82788343-82788362 None:intergenic 45.0%
TCATTTCCTTAAGCCACTGC+TGG + chr6.3:82789138-82789157 MS.gene66403:CDS 45.0%
TCCAATCATAAGTTCGACGC+CGG - chr6.3:82788819-82788838 None:intergenic 45.0%
TCCTTAGGTGAACCTTTCGA+AGG - chr6.3:82789406-82789425 None:intergenic 45.0%
TCTACAAAAGGTGGTCAACC+AGG - chr6.3:82788380-82788399 None:intergenic 45.0%
TGCATAGTCCAAGGACACTT+TGG - chr6.3:82789236-82789255 None:intergenic 45.0%
TGCTGCAAGGACATTAGTCA+TGG - chr6.3:82789008-82789027 None:intergenic 45.0%
TGTAGGGGAGACTCTACAAA+AGG - chr6.3:82788392-82788411 None:intergenic 45.0%
! ACCTGATAAGGTGTCACAGT+TGG + chr6.3:82788721-82788740 MS.gene66403:CDS 45.0%
! AGCCAGGTTTGGAATCTGAA+AGG + chr6.3:82789563-82789582 MS.gene66403:CDS 45.0%
! AGCCTAGATTTTACTGGACG+AGG + chr6.3:82789625-82789644 MS.gene66403:CDS 45.0%
! AGTCGTTGACTGACATTCGT+TGG + chr6.3:82788350-82788369 MS.gene66403:intron 45.0%
! ATCTTGGTGGCTGGATAGTA+AGG - chr6.3:82788917-82788936 None:intergenic 45.0%
! ATGTATGTGATCTTGGTGGC+TGG - chr6.3:82788926-82788945 None:intergenic 45.0%
! CTGTACACGTTTGTTAGGTC+CGG - chr6.3:82789607-82789626 None:intergenic 45.0%
! GTCGTTGACTGACATTCGTT+GGG + chr6.3:82788351-82788370 MS.gene66403:intron 45.0%
! TCGTTGACTGACATTCGTTG+GGG + chr6.3:82788352-82788371 MS.gene66403:intron 45.0%
!! CTATTAAAAGCACCAGCCGA+AGG - chr6.3:82789109-82789128 None:intergenic 45.0%
!! TGTTGCTACGGGAGTTTTGT+TGG + chr6.3:82788662-82788681 MS.gene66403:CDS 45.0%
!!! CATCAGAAGCACCATTTTGC+TGG - chr6.3:82789876-82789895 None:intergenic 45.0%
!!! GATGTTGCCTGTAGTTTTGG+AGG + chr6.3:82789892-82789911 MS.gene66403:CDS 45.0%
AACGGGACACCTGTAATTCG+AGG - chr6.3:82787799-82787818 None:intergenic 50.0%
ACACGACATGTGTCCGACAA+CGG - chr6.3:82787817-82787836 None:intergenic 50.0%
ACCAGTCCCTCCAAAACTAC+AGG - chr6.3:82789902-82789921 None:intergenic 50.0%
ACGGACACTCCTCGAATTAC+AGG + chr6.3:82787787-82787806 MS.gene66403:intron 50.0%
AGGGGAGACTCTACAAAAGG+TGG - chr6.3:82788389-82788408 None:intergenic 50.0%
CATGGCTGGCACAACTAATG+CGG - chr6.3:82788990-82789009 None:intergenic 50.0%
CCGAACACACACTACATGGT+TGG - chr6.3:82787732-82787751 None:intergenic 50.0%
CTTGCAGCACTCAAGAAAGC+TGG + chr6.3:82789019-82789038 MS.gene66403:CDS 50.0%
GCAAGGACATTAGTCATGGC+TGG - chr6.3:82789004-82789023 None:intergenic 50.0%
GCCACTGCTGGAATTTCTTG+CGG + chr6.3:82789150-82789169 MS.gene66403:CDS 50.0%
GCCTTCGAAAGGTTCACCTA+AGG + chr6.3:82789402-82789421 MS.gene66403:CDS 50.0%
TATCCGGCTCAAAACAAGGC+TGG - chr6.3:82789813-82789832 None:intergenic 50.0%
TCATGGTAACCGAGACAGGT+TGG + chr6.3:82789380-82789399 MS.gene66403:CDS 50.0%
TCCGCAAGAAATTCCAGCAG+TGG - chr6.3:82789154-82789173 None:intergenic 50.0%
TCTTTGCTTGAGGAGGATGG+AGG - chr6.3:82790434-82790453 None:intergenic 50.0%
TGGTGGCTGGATAGTAAGGA+AGG - chr6.3:82788913-82788932 None:intergenic 50.0%
TGTGACACCTTATCAGGTGG+AGG - chr6.3:82788719-82788738 None:intergenic 50.0%
TTTCGAAGGCCAACCTGTCT+CGG - chr6.3:82789392-82789411 None:intergenic 50.0%
! ACCGGCGTCGAACTTATGAT+TGG + chr6.3:82788815-82788834 MS.gene66403:CDS 50.0%
! CAGCTTTCTTGAGTGCTGCA+AGG - chr6.3:82789021-82789040 None:intergenic 50.0%
! CTCTCCAACCAAAGTGTCCT+TGG + chr6.3:82789225-82789244 MS.gene66403:CDS 50.0%
!! TAAAAGCACCAGCCGAAGGA+GGG - chr6.3:82789105-82789124 None:intergenic 50.0%
!! TTAAAAGCACCAGCCGAAGG+AGG - chr6.3:82789106-82789125 None:intergenic 50.0%
!!! TAGCCAGCCTTGTTTTGAGC+CGG + chr6.3:82789807-82789826 MS.gene66403:CDS 50.0%
AACCGGTACACCTGCAAAGC+CGG + chr6.3:82789492-82789511 MS.gene66403:CDS 55.0%
ACACCTTATCAGGTGGAGGC+AGG - chr6.3:82788715-82788734 None:intergenic 55.0%
CACGACATGTGTCCGACAAC+GGG - chr6.3:82787816-82787835 None:intergenic 55.0%
CTATGAGACACCGTCGGACT+CGG - chr6.3:82788146-82788165 None:intergenic 55.0%
CTGACATTCGTTGGGGAACC+TGG + chr6.3:82788359-82788378 MS.gene66403:intron 55.0%
GAGTCCGACGGTGTCTCATA+GGG + chr6.3:82788145-82788164 MS.gene66403:intron 55.0%
GCATCTGCGGTCATGTCAAC+AGG - chr6.3:82789652-82789671 None:intergenic 55.0%
GGAGTAGCAGCTGTCTCCTT+AGG - chr6.3:82789421-82789440 None:intergenic 55.0%
GTCTCGATCGTTCCCTCCTT+CGG + chr6.3:82789090-82789109 MS.gene66403:CDS 55.0%
TGACCTGCCTCCACCTGATA+AGG + chr6.3:82788709-82788728 MS.gene66403:CDS 55.0%
TTGTGTGTGTCCGAGTCCGA+CGG + chr6.3:82788133-82788152 MS.gene66403:intron 55.0%
! GGCTCAAAACAAGGCTGGCT+AGG - chr6.3:82789808-82789827 None:intergenic 55.0%
! TCATGTGCGAGCCTTGTCGA+TGG - chr6.3:82788427-82788446 None:intergenic 55.0%
!! GAGACAGGTTGGCCTTCGAA+AGG + chr6.3:82789391-82789410 MS.gene66403:CDS 55.0%
!! TAGACGTCTAGCTCTTCCCC+CGG - chr6.3:82789514-82789533 None:intergenic 55.0%
!!! GCCTGTAGTTTTGGAGGGAC+TGG + chr6.3:82789898-82789917 MS.gene66403:CDS 55.0%
ACCGGTACACCTGCAAAGCC+GGG + chr6.3:82789493-82789512 MS.gene66403:CDS 60.0%
CGAGTCCGACGGTGTCTCAT+AGG + chr6.3:82788144-82788163 MS.gene66403:intron 60.0%
AGCTCTTCCCCCGGCTTTGC+AGG - chr6.3:82789505-82789524 None:intergenic 65.0%
CCCCGGCTTTGCAGGTGTAC+CGG - chr6.3:82789497-82789516 None:intergenic 65.0%
CCGGTACACCTGCAAAGCCG+GGG + chr6.3:82789494-82789513 MS.gene66403:CDS 65.0%
CGATCGTTCCCTCCTTCGGC+TGG + chr6.3:82789094-82789113 MS.gene66403:CDS 65.0%
CGGTACACCTGCAAAGCCGG+GGG + chr6.3:82789495-82789514 MS.gene66403:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 82787277 82790529 82787277 ID=MS.gene66403
chr6.3 mRNA 82787277 82790529 82787277 ID=MS.gene66403.t1;Parent=MS.gene66403
chr6.3 exon 82787277 82787334 82787277 ID=MS.gene66403.t1.exon1;Parent=MS.gene66403.t1
chr6.3 CDS 82787277 82787334 82787277 ID=cds.MS.gene66403.t1;Parent=MS.gene66403.t1
chr6.3 exon 82788660 82789943 82788660 ID=MS.gene66403.t1.exon2;Parent=MS.gene66403.t1
chr6.3 CDS 82788660 82789943 82788660 ID=cds.MS.gene66403.t1;Parent=MS.gene66403.t1
chr6.3 exon 82790226 82790256 82790226 ID=MS.gene66403.t1.exon3;Parent=MS.gene66403.t1
chr6.3 CDS 82790226 82790256 82790226 ID=cds.MS.gene66403.t1;Parent=MS.gene66403.t1
chr6.3 exon 82790379 82790529 82790379 ID=MS.gene66403.t1.exon4;Parent=MS.gene66403.t1
chr6.3 CDS 82790379 82790529 82790379 ID=cds.MS.gene66403.t1;Parent=MS.gene66403.t1
Gene Sequence

>MS.gene66403

ATGGCAAGAGGGTTTTGCTTCATCTTGGTTGTTGCTTCAGTTTTGCTTATGCTTCTTGGTTTGTACTTCTTTCTCTTTCTATGAACACTTTGCATTATGTTTATGATCTAAGTACTTTTGTTGCATGTTTCTTGGTTCATCATGTTTTTATGTTGTGTTTTTTGTAATGTACTTGTTTCTAAGTACTTTTTGTTGCATGTTTCTTGGTTCATGATGTCACTATTTTCTCATAGCTATATTTTCTCTCAATTTTTTTTAAAAGTTGTTTGTGATGTTAAGCTTGTTACCCTTTATGGAAAACATGAGAAATGGAAGACTTCTAAGTTTGGAACTAGATAGAAGATAGGTCAAAAGCAGTTTCTAATGTTATTGTTCATAGACATTAATCTCATTAAGTGGCTTGCATAATCAGTTTCATTTCATGTGGATCTAACTTTTCTAACCATCATTAACCAACCATGTAGTGTGTGTTCGGTTATGCGGTGACAAAACTTGATTTTGAACTGAAGCACGGACACTCCTCGAATTACAGGTGTCCCGTTGTCGGACACATGTCGTGTCTGACACCGACACCGACCCATATAATTACATTGAATTATGAGATTTTCTCAAATTATTAGCGGTGTTGGCATGTCAGTGTCCAGTGTCCGTGCTTCATAGATTTTGAATAATTAATTATGTAAAATTGATTCTGCTTAAAAATGAGTTGAATATAAAGTTATTTATGTTTGGATACACTCGTGGACACTTAAGTTTGAAGGCGCGTCTGCGTGTGTCCAACATTCATACGATAGTGACACATAATCACTTTCATTTTCTTAAATTTCTATTTACTACTATGTCTACATATCAGTGTTTGTGTGTGTCCGAGTCCGACGGTGTCTCATAGGGTTTAACTCACATTTGAGAGATTTGGTTTTGATTTTGTAAAAAAAACTATATTTTTGGATATATCAAGCCTAAACTACTTTTGTTCCATTTAGCATGATTAACTAAAACAAAGCTTTGTAACATCGGTTAAGAATTTGTTGGCTAACCATGTCAATGTCATTAGTCAAAGTATCCACTGACTTAGTCGTTGACTGACATTCGTTGGGGAACCTGGTTGACCACCTTTTGTAGAGTCTCCCCTACAACCACATTTGTTCCATCGACAAGGCTCGCACATGAAATATTACTTAAGAGATCCGAGTCCAGTTTCACTCGAATGAATGTAATGTTGGTTGGTTAAGAATTTGATACTGAAATAATTGCAAATTAATAAATTGTTGTTTTGACTTGCAGATACTATTCTCAATTGTAATTCTTATTTCTTCTATTTGATATTTATGGAATTTTGTAATTCTTATTTATTTTATTTGATTTTTATGAATTTATTTCCAGATTGTTGCTACGGGAGTTTTGTTGGAATTTGCTATGGAAGAAATGCTGATGACCTGCCTCCACCTGATAAGGTGTCACAGTTGGTTCAAGATCACAAAATCAAATATGTCAGAATTTACGATTCTAACATACAAGTTCTAAAATCTTTTGCAAACACCGGCGTCGAACTTATGATTGGAATTCCAAATCTAGATTTGCTTCCGTTCTCTCAGTTCCAAACTAATGCAGACACTTGGCTGAGAAATAGCATCCTTCCTTACTATCCAGCCACCAAGATCACATACATAACTGTCGGTGCCGAAGTTACAGAAAGTCCCGAAAACATTTCCGCATTAGTTGTGCCAGCCATGACTAATGTCCTTGCAGCACTCAAGAAAGCTGGACTTCATAAGAAGATAAAAGTTTCCAGTACTCATTCCCTTGGAGTTTTGTCTCGATCGTTCCCTCCTTCGGCTGGTGCTTTTAATAGCAAACATGCTCATTTCCTTAAGCCACTGCTGGAATTTCTTGCGGAAAATCAGTCGCCTTTTATGATCGATCTGTATCCTTATTACGCATATCGTGACTCTCCAACCAAAGTGTCCTTGGACTATGCATTGTTTGAGTCCTCCTCCGAAGTTATTGATCCTAACACTGGTTTGCTTTATACAAACATGTTTGATGCTCAGATTGATGCAATTTATTTTGCGTTAACGGCGTTGAATTTCAGAACGATTAAAGTCATGGTAACCGAGACAGGTTGGCCTTCGAAAGGTTCACCTAAGGAGACAGCTGCTACTCCTGATAATGCACAAACATATAATACCAATCTGATAAGACATGTTATCAATGAAACCGGTACACCTGCAAAGCCGGGGGAAGAGCTAGACGTCTACATATTTTCATTGTTCAATGAAAATAGGAAGCCAGGTTTGGAATCTGAAAGGAACTGGGGAATAGTTTATCCGGACCTAACAAACGTGTACAGCCTAGATTTTACTGGACGAGGTCCTGTTGACATGACCGCAGATGCAAATGCTACTAGTTCAACTTCAAATGGAACAAAATGGTGCATTGCTTCGAGTAACGCAACTCAACTTGACTTACAAAATGCGATAAATTGGGCTTGTGGTACTTCTGGAAATGTGGACTGTACTGCTATTCAGCCTAGCCAGCCTTGTTTTGAGCCGGATAACTTAGTCTCGCATGCTTCATATGCTTTTAATAGCTATTACCAGCAAAATGGTGCTTCTGATGTTGCCTGTAGTTTTGGAGGGACTGGTGTACTTGTTGATAAGGATCCAAGTATGTTCATATCCCATCACTTAATTAATTTGCCTTTCCATTTTTCAGTTTTTTTCGTATACTTATCTTTTCGGCAGCTATTGCATGCTTTTTTTAGGTTTAAATATGTTATGGTCCCTGTAAATATGCAATATTTTCCATTTGTCCTTGCTATTTTTTTGGTCCTGATAAATTTGTTCATCTTTGAATGATCCTGTAATATGTGTAGATGATTTATTGTTGCTAAAGCATTTCTGTAGACCGTTTTTCTTACTGAACAAACTATTTTTTTCGATTTTGCAGCCTATGACAACTGCATCTACATGAAAACTGGGTATGTTCAGTCCTTGAAAATTTCTTTGTTGGTTTTATATCCGTAAATTGTTGTATTACGCCTTATCATTATTAAGACTGAAGCATGACATTTGAGTCTTTTTCTCTCCTGTTTTTGTGCAGAACTAACCAAACTTTGGCAAGTAATAATACAACGGCGACATCAATATCTTCACCTCCATCCTCCTCAAGCAAAGAAGTCTACTCATCAATCTCGACTAGTGCTCTTCTTTTGATCTTTCTCCTTTTTCTTTTGGATATCGGACAAGCCTAA
Protein sequence

>MS.gene66403.t1

MARGFCFILVVASVLLMLLDCCYGSFVGICYGRNADDLPPPDKVSQLVQDHKIKYVRIYDSNIQVLKSFANTGVELMIGIPNLDLLPFSQFQTNADTWLRNSILPYYPATKITYITVGAEVTESPENISALVVPAMTNVLAALKKAGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSKHAHFLKPLLEFLAENQSPFMIDLYPYYAYRDSPTKVSLDYALFESSSEVIDPNTGLLYTNMFDAQIDAIYFALTALNFRTIKVMVTETGWPSKGSPKETAATPDNAQTYNTNLIRHVINETGTPAKPGEELDVYIFSLFNENRKPGLESERNWGIVYPDLTNVYSLDFTGRGPVDMTADANATSSTSNGTKWCIASSNATQLDLQNAINWACGTSGNVDCTAIQPSQPCFEPDNLVSHASYAFNSYYQQNGASDVACSFGGTGVLVDKDPTYDNCIYMKTGTNQTLASNNTTATSISSPPSSSSKEVYSSISTSALLLIFLLFLLDIGQA