Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66953.t1 | XP_013451595.1 | 98.8 | 338 | 4 | 0 | 1 | 338 | 32 | 369 | 2.30E-178 | 634.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66953.t1 | Q8RWF4 | 75.4 | 341 | 79 | 3 | 1 | 338 | 32 | 370 | 5.4e-136 | 485.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66953.t1 | A0A072U945 | 98.8 | 338 | 4 | 0 | 1 | 338 | 32 | 369 | 1.6e-178 | 634.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene66953 | 0.825706 | 4.05E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene66953 | 0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene66953 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene66953 | 0.842907 | 1.94E-58 | -1.69E-46 |
| MS.gene052463 | MS.gene66953 | 0.805411 | 1.35E-49 | -1.69E-46 |
| MS.gene052493 | MS.gene66953 | 0.821126 | 4.77E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene66953 | 0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene054641 | MS.gene66953 | 0.81604 | 6.79E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene66953 | 0.85728 | 1.82E-62 | -1.69E-46 |
| MS.gene054893 | MS.gene66953 | 0.855991 | 4.35E-62 | -1.69E-46 |
| MS.gene055513 | MS.gene66953 | 0.816184 | 6.30E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene66953 | 0.829748 | 4.33E-55 | -1.69E-46 |
| MS.gene058429 | MS.gene66953 | 0.826263 | 2.99E-54 | -1.69E-46 |
| MS.gene059170 | MS.gene66953 | 0.829361 | 5.37E-55 | -1.69E-46 |
| MS.gene05952 | MS.gene66953 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene66953 | 0.834982 | 2.19E-56 | -1.69E-46 |
| MS.gene060259 | MS.gene66953 | 0.809842 | 1.55E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene66953 | 0.834958 | 2.22E-56 | -1.69E-46 |
| MS.gene060932 | MS.gene66953 | 0.841398 | 4.87E-58 | -1.69E-46 |
| MS.gene061047 | MS.gene66953 | 0.81323 | 2.84E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene66953 | 0.82289 | 1.86E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66953.t1 | MTR_6g033100 | 98.817 | 338 | 4 | 0 | 1 | 338 | 32 | 369 | 0.0 | 677 |
| MS.gene66953.t1 | MTR_3g083960 | 20.205 | 292 | 217 | 2 | 21 | 312 | 50 | 325 | 6.95e-14 | 72.0 |
| MS.gene66953.t1 | MTR_4g074050 | 19.557 | 271 | 198 | 4 | 26 | 293 | 54 | 307 | 6.66e-12 | 65.9 |
| MS.gene66953.t1 | MTR_2g006070 | 21.708 | 281 | 195 | 3 | 21 | 293 | 60 | 323 | 2.99e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66953.t1 | AT3G26670 | 75.073 | 341 | 80 | 3 | 1 | 338 | 32 | 370 | 0.0 | 508 |
| MS.gene66953.t1 | AT3G26670 | 75.073 | 341 | 80 | 3 | 1 | 338 | 32 | 370 | 0.0 | 508 |
| MS.gene66953.t1 | AT3G26670 | 75.073 | 341 | 80 | 3 | 1 | 338 | 32 | 370 | 0.0 | 508 |
| MS.gene66953.t1 | AT3G26670 | 75.073 | 341 | 80 | 3 | 1 | 338 | 32 | 370 | 0.0 | 508 |
| MS.gene66953.t1 | AT2G21120 | 19.322 | 295 | 209 | 5 | 6 | 295 | 36 | 306 | 2.39e-11 | 64.3 |
| MS.gene66953.t1 | AT4G09640 | 21.452 | 303 | 216 | 3 | 26 | 328 | 67 | 347 | 5.81e-11 | 63.5 |
| MS.gene66953.t1 | AT1G34470 | 23.166 | 259 | 171 | 2 | 26 | 277 | 67 | 304 | 8.16e-11 | 63.2 |
Find 63 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAGTACTGCTGGATTT+TGG | 0.142862 | 6.1:-11823697 | MS.gene66953:CDS |
| TCTTAGCCGTTACTTGTAAA+TGG | 0.216028 | 6.1:+11824248 | None:intergenic |
| CAGTCACTTCTTGCAGCTTT+GGG | 0.250820 | 6.1:-11824800 | MS.gene66953:CDS |
| GATAAAGATTACAGATATTC+TGG | 0.265706 | 6.1:-11820996 | MS.gene66953:CDS |
| GCAGTCACTTCTTGCAGCTT+TGG | 0.277025 | 6.1:-11824801 | MS.gene66953:intron |
| GCCACAGCTTTCATTGTTCT+TGG | 0.284449 | 6.1:-11824594 | MS.gene66953:CDS |
| GTTCATTGGTATTTCTTTGC+TGG | 0.299314 | 6.1:-11821531 | MS.gene66953:CDS |
| TGAGACTAAAGATAGTTCTT+TGG | 0.302978 | 6.1:-11821400 | MS.gene66953:CDS |
| AGCCAAAGGAAATGAAATTA+AGG | 0.313097 | 6.1:+11825143 | None:intergenic |
| TGCCTTAATTTCATTTCCTT+TGG | 0.323753 | 6.1:-11825145 | MS.gene66953:CDS |
| CAACTCTGAAAGTATATAAT+AGG | 0.327966 | 6.1:+11825294 | None:intergenic |
| GTCTTTGCTGTGTGCTTCTT+CGG | 0.331223 | 6.1:+11821045 | None:intergenic |
| ACATGACCTCAAACCCATTT+GGG | 0.334317 | 6.1:-11824126 | MS.gene66953:CDS |
| CCTCTTTGTTTCTGTTGAAA+TGG | 0.356734 | 6.1:+11821359 | None:intergenic |
| TTACTTTGTGTTGAACAAAA+TGG | 0.359982 | 6.1:-11824744 | MS.gene66953:CDS |
| TTCCTTTGGCTATGCTGCTC+AGG | 0.369645 | 6.1:-11825131 | MS.gene66953:intron |
| CAATTACAATCAAAGCTAAA+AGG | 0.375249 | 6.1:+11824286 | None:intergenic |
| AACAGGTATTTGACACGTTA+AGG | 0.379853 | 6.1:-11821586 | MS.gene66953:intron |
| CGGCAATAGCATACCCCAAA+TGG | 0.385675 | 6.1:+11824112 | None:intergenic |
| GTAGCAGACTTACAGTGATT+TGG | 0.388285 | 6.1:+11824037 | None:intergenic |
| GACATGACCTCAAACCCATT+TGG | 0.390111 | 6.1:-11824127 | MS.gene66953:CDS |
| GAACTTCTGCTTGCTATATC+AGG | 0.394740 | 6.1:-11824149 | MS.gene66953:CDS |
| CTTGGAAGTGATGGGGTACA+TGG | 0.397753 | 6.1:-11825333 | MS.gene66953:CDS |
| TATTTCTCTGTCAACTGCTC+TGG | 0.408057 | 6.1:+11824333 | None:intergenic |
| TTGTCCTTTAAACAGGGTAT+TGG | 0.422996 | 6.1:-11824619 | MS.gene66953:intron |
| TTACGACTGGCTATGTCTAA+TGG | 0.429669 | 6.1:-11823764 | MS.gene66953:CDS |
| AGGACAACAATGTTTATACT+TGG | 0.430760 | 6.1:-11821566 | MS.gene66953:CDS |
| TTTGTTTCTGTTGAAATGGC+AGG | 0.454053 | 6.1:+11821363 | None:intergenic |
| CAGAGAGAAAGACATTTACT+TGG | 0.454553 | 6.1:-11825351 | MS.gene66953:CDS |
| CTATTATATACTTTCAGAGT+TGG | 0.454723 | 6.1:-11825293 | MS.gene66953:CDS |
| ATGGCTATCAGCTGCACAGC+TGG | 0.462592 | 6.1:-11823745 | MS.gene66953:CDS |
| AGACATTTACTTGGAAGTGA+TGG | 0.463692 | 6.1:-11825342 | MS.gene66953:CDS |
| TAGACATAGCCAGTCGTAAG+AGG | 0.475251 | 6.1:+11823768 | None:intergenic |
| TACTTTCAGAGTTGGAGAAT+CGG | 0.476261 | 6.1:-11825285 | MS.gene66953:intron |
| TTCCCATGTTTCAAATAGCA+TGG | 0.482456 | 6.1:-11823535 | MS.gene66953:CDS |
| GACATTTACTTGGAAGTGAT+GGG | 0.492218 | 6.1:-11825341 | MS.gene66953:CDS |
| ACATTCTTCTCAATCTGTAC+AGG | 0.494590 | 6.1:-11823512 | MS.gene66953:CDS |
| GGAATGATGTGTGTGTTCAT+TGG | 0.500051 | 6.1:-11821545 | MS.gene66953:CDS |
| TAAGTTACATACCAGGTGAT+TGG | 0.511073 | 6.1:+11824541 | None:intergenic |
| GCATACCCCAAATGGGTTTG+AGG | 0.512283 | 6.1:+11824120 | None:intergenic |
| CTGGCACCTGATGAATCAAA+AGG | 0.517430 | 6.1:-11821512 | MS.gene66953:intron |
| GGCAATAGCATACCCCAAAT+GGG | 0.523524 | 6.1:+11824113 | None:intergenic |
| CAGATGACTAGGTTGAATGA+AGG | 0.523979 | 6.1:-11823587 | MS.gene66953:CDS |
| GAAACTACAGCATATGAAAA+CGG | 0.535353 | 6.1:+11824092 | None:intergenic |
| GTCCATGCTATTTGAAACAT+GGG | 0.543572 | 6.1:+11823533 | None:intergenic |
| TGTCCATGCTATTTGAAACA+TGG | 0.547427 | 6.1:+11823532 | None:intergenic |
| AGATATTCTGGTCAAGGCAA+AGG | 0.550087 | 6.1:-11820984 | None:intergenic |
| CAGTTCTAACCTCTTACGAC+TGG | 0.564450 | 6.1:-11823777 | MS.gene66953:CDS |
| GATTACAGATATTCTGGTCA+AGG | 0.568159 | 6.1:-11820990 | MS.gene66953:CDS |
| ACTGAGAAATAAAAGAAGCA+TGG | 0.568619 | 6.1:+11823712 | None:intergenic |
| TTTCATATGCTGTAGTTTCG+GGG | 0.572383 | 6.1:-11824088 | MS.gene66953:CDS |
| AATAAGAATTGCATCGAACA+TGG | 0.577173 | 6.1:+11823559 | None:intergenic |
| TCAAAGCTAAAAGGTACAGA+AGG | 0.587426 | 6.1:+11824295 | None:intergenic |
| GTACAGAAGGAACGCGACAT+TGG | 0.594650 | 6.1:+11824308 | None:intergenic |
| TTCATATGCTGTAGTTTCGG+GGG | 0.615874 | 6.1:-11824087 | MS.gene66953:CDS |
| TGAAATGGCAGGAGACACTA+CGG | 0.632048 | 6.1:+11821374 | None:intergenic |
| CCATTTCAACAGAAACAAAG+AGG | 0.633660 | 6.1:-11821359 | MS.gene66953:intron |
| TCCAAGAACAATGAAAGCTG+TGG | 0.636557 | 6.1:+11824593 | None:intergenic |
| TTTGGAAATCACCAATCACC+TGG | 0.643242 | 6.1:-11824552 | MS.gene66953:intron |
| ACACAAAGTAAGCGAATGCG+AGG | 0.654505 | 6.1:+11824756 | None:intergenic |
| ACATTTACTTGGAAGTGATG+GGG | 0.654846 | 6.1:-11825340 | MS.gene66953:CDS |
| TACCTGAGCAGCATAGCCAA+AGG | 0.659340 | 6.1:+11825129 | None:intergenic |
| CATGACCTCAAACCCATTTG+GGG | 0.699560 | 6.1:-11824125 | MS.gene66953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAATACTATAAATA+GGG | - | chr6.1:11823819-11823838 | MS.gene66953:intron | 10.0% |
| !! | TTAATATGAGAAATATTAAA+GGG | - | chr6.1:11824109-11824128 | MS.gene66953:CDS | 10.0% |
| !! | TTTAATATTACAAATACAAT+GGG | + | chr6.1:11823100-11823119 | None:intergenic | 10.0% |
| !!! | ATAAATACAAAATTGTTTTA+AGG | - | chr6.1:11824848-11824867 | MS.gene66953:intron | 10.0% |
| !!! | ATTATAGATTGAAAATTTTA+GGG | - | chr6.1:11824199-11824218 | MS.gene66953:intron | 10.0% |
| !!! | TGTTTTTTCATAATAAATTT+AGG | - | chr6.1:11824698-11824717 | MS.gene66953:intron | 10.0% |
| !!! | TTTTAATATTACAAATACAA+TGG | + | chr6.1:11823101-11823120 | None:intergenic | 10.0% |
| !! | AATTGAAATACTATAAATAG+GGG | - | chr6.1:11823820-11823839 | MS.gene66953:intron | 15.0% |
| !! | ATCATAAAATTACATATGTT+AGG | + | chr6.1:11821264-11821283 | None:intergenic | 15.0% |
| !! | CTTAATATGAGAAATATTAA+AGG | - | chr6.1:11824108-11824127 | MS.gene66953:CDS | 15.0% |
| !! | GAAATTGAAATACTATAAAT+AGG | - | chr6.1:11823818-11823837 | MS.gene66953:intron | 15.0% |
| !! | TGAAATAATTTCAAAATACT+TGG | - | chr6.1:11823195-11823214 | MS.gene66953:intron | 15.0% |
| !! | TTCTTAAATATATATCCTAA+GGG | + | chr6.1:11823019-11823038 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTACCGAAAAAT+AGG | + | chr6.1:11822668-11822687 | None:intergenic | 15.0% |
| !!! | ATCAAATGAACTTTTTTTTA+AGG | + | chr6.1:11821490-11821509 | None:intergenic | 15.0% |
| !!! | GATTATAGATTGAAAATTTT+AGG | - | chr6.1:11824198-11824217 | MS.gene66953:intron | 15.0% |
| !! | AATTAAATGTAATCATGTGT+CGG | + | chr6.1:11822415-11822434 | None:intergenic | 20.0% |
| !! | AATTTCCAAGAAAGAAAAAT+AGG | + | chr6.1:11821169-11821188 | None:intergenic | 20.0% |
| !! | AGAAGTTAAAATCAAACTTA+TGG | - | chr6.1:11822958-11822977 | MS.gene66953:intron | 20.0% |
| !! | ATTGAAATACTATAAATAGG+GGG | - | chr6.1:11823821-11823840 | MS.gene66953:intron | 20.0% |
| !! | GTCTACTTATTAAGAATAAA+CGG | + | chr6.1:11824485-11824504 | None:intergenic | 20.0% |
| !! | GTTCTTAAATATATATCCTA+AGG | + | chr6.1:11823020-11823039 | None:intergenic | 20.0% |
| !! | TAATATTTGTCCTTTAAACA+GGG | - | chr6.1:11821708-11821727 | MS.gene66953:intron | 20.0% |
| !! | TAATTTCAAAATACTTGGTT+TGG | - | chr6.1:11823200-11823219 | MS.gene66953:intron | 20.0% |
| !! | TACTTCATAATAATCAAAGT+TGG | + | chr6.1:11824334-11824353 | None:intergenic | 20.0% |
| !! | TATATCAGATAAAACAGTAT+TGG | + | chr6.1:11825253-11825272 | None:intergenic | 20.0% |
| !! | TTAATATTTGTCCTTTAAAC+AGG | - | chr6.1:11821707-11821726 | MS.gene66953:intron | 20.0% |
| !! | TTTCGGTAAAAAAAATTCTT+AGG | - | chr6.1:11822671-11822690 | MS.gene66953:intron | 20.0% |
| !!! | AATACTGTTTTATCTGATAT+AGG | - | chr6.1:11825252-11825271 | MS.gene66953:intron | 20.0% |
| !!! | ATATGATAATTGTTCACTTT+TGG | + | chr6.1:11825022-11825041 | None:intergenic | 20.0% |
| !!! | GAAATATTAAAGGGTATATT+AGG | - | chr6.1:11824118-11824137 | MS.gene66953:CDS | 20.0% |
| !!! | GTCATTTTCTTAAAATACTA+TGG | - | chr6.1:11821416-11821435 | MS.gene66953:intron | 20.0% |
| !!! | TACAGGATTTATATATTTTC+AGG | - | chr6.1:11822838-11822857 | MS.gene66953:intron | 20.0% |
| !!! | TATATATTTTCAGGAATATC+AGG | - | chr6.1:11822847-11822866 | MS.gene66953:intron | 20.0% |
| !!! | TTGTATAAATTTTGATATGC+AGG | - | chr6.1:11821140-11821159 | MS.gene66953:intron | 20.0% |
| !!! | TTTTTTTCTGAAGCTTAATA+TGG | + | chr6.1:11821893-11821912 | None:intergenic | 20.0% |
| ! | AAATTATTTCAGCGATGATA+TGG | + | chr6.1:11823186-11823205 | None:intergenic | 25.0% |
| ! | AGAAAAAATGCTCATTTCAA+TGG | - | chr6.1:11821931-11821950 | MS.gene66953:intron | 25.0% |
| ! | ATAAAAGTTGTAGAAGTGAT+AGG | + | chr6.1:11824620-11824639 | None:intergenic | 25.0% |
| ! | ATATGCAATTACATGTAATC+AGG | - | chr6.1:11824018-11824037 | MS.gene66953:intron | 25.0% |
| ! | ATATTAACCTTTGAATACCT+CGG | + | chr6.1:11824886-11824905 | None:intergenic | 25.0% |
| ! | ATTAAGAATAAACGGAGTTA+TGG | + | chr6.1:11824477-11824496 | None:intergenic | 25.0% |
| ! | CAATTACAATCAAAGCTAAA+AGG | + | chr6.1:11822050-11822069 | None:intergenic | 25.0% |
| ! | CTAAATTCATTGAGTTAACT+AGG | - | chr6.1:11824176-11824195 | MS.gene66953:intron | 25.0% |
| ! | CTATTATATACTTTCAGAGT+TGG | - | chr6.1:11821040-11821059 | MS.gene66953:CDS | 25.0% |
| ! | GATAAAGATTACAGATATTC+TGG | - | chr6.1:11825337-11825356 | MS.gene66953:CDS | 25.0% |
| ! | TATGAAATAAGTTACATACC+AGG | + | chr6.1:11821802-11821821 | None:intergenic | 25.0% |
| ! | TGTAATTGCATATATGTATG+TGG | - | chr6.1:11821076-11821095 | MS.gene66953:intron | 25.0% |
| ! | TTACTTTGTGTTGAACAAAA+TGG | - | chr6.1:11821589-11821608 | MS.gene66953:intron | 25.0% |
| !! | AATCATTTAGTTTCCTTTCA+GGG | + | chr6.1:11825056-11825075 | None:intergenic | 25.0% |
| !! | AGAGTAGACTTATGAATTTT+AGG | + | chr6.1:11823042-11823061 | None:intergenic | 25.0% |
| !! | AGGATTTTTCTAATGAATAG+CGG | - | chr6.1:11824385-11824404 | MS.gene66953:intron | 25.0% |
| !! | CAACTCTGAAAGTATATAAT+AGG | + | chr6.1:11821042-11821061 | None:intergenic | 25.0% |
| !! | TAGGAAAGTACACTATTAAA+GGG | - | chr6.1:11824137-11824156 | MS.gene66953:CDS | 25.0% |
| !! | TTACATTGGTAGAACAATTT+TGG | + | chr6.1:11821671-11821690 | None:intergenic | 25.0% |
| !! | TTAGGAAAGTACACTATTAA+AGG | - | chr6.1:11824136-11824155 | MS.gene66953:CDS | 25.0% |
| !!! | AAAATTTTAGGGATGCAAAT+GGG | - | chr6.1:11824210-11824229 | MS.gene66953:intron | 25.0% |
| !!! | ATAATACCTTTTGATTCATC+AGG | + | chr6.1:11824830-11824849 | None:intergenic | 25.0% |
| !!! | ATATGAACATTGATTTCACA+AGG | + | chr6.1:11821853-11821872 | None:intergenic | 25.0% |
| !!! | TTTTATGGAGAAGTACTTAT+AGG | - | chr6.1:11823730-11823749 | MS.gene66953:CDS | 25.0% |
| AAAAACAAGAATCAGCAACA+TGG | + | chr6.1:11821118-11821137 | None:intergenic | 30.0% | |
| AACCTTATCTTCATGAAAAC+AGG | - | chr6.1:11824730-11824749 | MS.gene66953:intron | 30.0% | |
| AATAAGAATTGCATCGAACA+TGG | + | chr6.1:11822777-11822796 | None:intergenic | 30.0% | |
| ACTGAGAAATAAAAGAAGCA+TGG | + | chr6.1:11822624-11822643 | None:intergenic | 30.0% | |
| ACTGTGTACTTTATTCCTAA+TGG | - | chr6.1:11822519-11822538 | MS.gene66953:intron | 30.0% | |
| AGCCAAAGGAAATGAAATTA+AGG | + | chr6.1:11821193-11821212 | None:intergenic | 30.0% | |
| AGGACAACAATGTTTATACT+TGG | - | chr6.1:11824767-11824786 | MS.gene66953:CDS | 30.0% | |
| ATCACTCCATTTACAAGTAA+CGG | - | chr6.1:11822079-11822098 | MS.gene66953:intron | 30.0% | |
| CATATTGTTATAGCAAGTTG+AGG | - | chr6.1:11823448-11823467 | MS.gene66953:intron | 30.0% | |
| GAAACTACAGCATATGAAAA+CGG | + | chr6.1:11822244-11822263 | None:intergenic | 30.0% | |
| GATTAAAATGTGAAATGTGC+AGG | - | chr6.1:11822155-11822174 | MS.gene66953:intron | 30.0% | |
| GTAGTTTCTGAGTAAGAATT+CGG | - | chr6.1:11823363-11823382 | MS.gene66953:intron | 30.0% | |
| GTGCAAACTAATTTATGTGA+CGG | - | chr6.1:11821953-11821972 | MS.gene66953:intron | 30.0% | |
| TAAGCCACAAGAATTTACAT+TGG | + | chr6.1:11821685-11821704 | None:intergenic | 30.0% | |
| TCATAAGTCTACTCTTACTT+TGG | - | chr6.1:11823047-11823066 | MS.gene66953:intron | 30.0% | |
| TCTACCAATGTAAATTCTTG+TGG | - | chr6.1:11821678-11821697 | MS.gene66953:intron | 30.0% | |
| TGAGACTAAAGATAGTTCTT+TGG | - | chr6.1:11824933-11824952 | MS.gene66953:intron | 30.0% | |
| TGCCTTAATTTCATTTCCTT+TGG | - | chr6.1:11821188-11821207 | MS.gene66953:intron | 30.0% | |
| TTAATAAGTAGACATCCTTC+CGG | - | chr6.1:11824492-11824511 | MS.gene66953:intron | 30.0% | |
| TTGAATGTATTCACATGTGT+CGG | + | chr6.1:11821392-11821411 | None:intergenic | 30.0% | |
| ! | AAAACATCCAATAAGTATCG+TGG | + | chr6.1:11821240-11821259 | None:intergenic | 30.0% |
| ! | AAGCACATGTTGCTTATTAT+GGG | - | chr6.1:11825212-11825231 | MS.gene66953:intron | 30.0% |
| ! | CAATCATTTAGTTTCCTTTC+AGG | + | chr6.1:11825057-11825076 | None:intergenic | 30.0% |
| ! | GGAAAATAAGGTCTTTTGTA+AGG | + | chr6.1:11823690-11823709 | None:intergenic | 30.0% |
| ! | GTTTTCATATGCTGTAGTTT+CGG | - | chr6.1:11822243-11822262 | MS.gene66953:intron | 30.0% |
| ! | TAAGCACATGTTGCTTATTA+TGG | - | chr6.1:11825211-11825230 | MS.gene66953:intron | 30.0% |
| ! | TAAGGTTTTACTATAAACCG+AGG | - | chr6.1:11824866-11824885 | MS.gene66953:intron | 30.0% |
| ! | TACCTGTTTTCATGAAGATA+AGG | + | chr6.1:11824735-11824754 | None:intergenic | 30.0% |
| ! | TTCTAATTTTGCAGATGACT+AGG | - | chr6.1:11822735-11822754 | MS.gene66953:intron | 30.0% |
| ! | TTTTCATATGCTGTAGTTTC+GGG | - | chr6.1:11822244-11822263 | MS.gene66953:intron | 30.0% |
| !! | CTAATGGATTGTAAAAACGA+GGG | + | chr6.1:11823511-11823530 | None:intergenic | 30.0% |
| !! | CTCAACTTGCTATAACAATA+TGG | + | chr6.1:11823450-11823469 | None:intergenic | 30.0% |
| !! | CTTATATGTTGCTATTTCCT+GGG | - | chr6.1:11823558-11823577 | MS.gene66953:CDS | 30.0% |
| !! | GAAAATTTTAGGGATGCAAA+TGG | - | chr6.1:11824209-11824228 | MS.gene66953:intron | 30.0% |
| !! | GGTATCCTATTTTTCTTTCT+TGG | - | chr6.1:11821161-11821180 | MS.gene66953:intron | 30.0% |
| !! | GTAGAACAATTTTGGTGAAA+AGG | + | chr6.1:11821663-11821682 | None:intergenic | 30.0% |
| !! | TCGTTTTTACAATCCATTAG+AGG | - | chr6.1:11823511-11823530 | MS.gene66953:CDS | 30.0% |
| !! | TCTAATGGATTGTAAAAACG+AGG | + | chr6.1:11823512-11823531 | None:intergenic | 30.0% |
| !!! | AATGTTTTTCTAGTTGCGTT+TGG | - | chr6.1:11821763-11821782 | MS.gene66953:intron | 30.0% |
| !!! | ATGTTGCTGATTCTTGTTTT+TGG | - | chr6.1:11821117-11821136 | MS.gene66953:intron | 30.0% |
| !!! | CTTTGTAAGTTTTGTTCAGA+TGG | - | chr6.1:11824302-11824321 | MS.gene66953:CDS | 30.0% |
| AAAACCATACATTCAGACCT+GGG | + | chr6.1:11823923-11823942 | None:intergenic | 35.0% | |
| AACAGAGATGATAGAAGGAT+AGG | + | chr6.1:11823950-11823969 | None:intergenic | 35.0% | |
| AACAGGTATTTGACACGTTA+AGG | - | chr6.1:11824747-11824766 | MS.gene66953:CDS | 35.0% | |
| AATTCGGCTAGAAGAGAATA+TGG | - | chr6.1:11823379-11823398 | MS.gene66953:intron | 35.0% | |
| ACAGAGATGATAGAAGGATA+GGG | + | chr6.1:11823949-11823968 | None:intergenic | 35.0% | |
| ACATCTGCAAACATTGATGA+AGG | + | chr6.1:11822698-11822717 | None:intergenic | 35.0% | |
| ACATTCTTCTCAATCTGTAC+AGG | - | chr6.1:11822821-11822840 | MS.gene66953:intron | 35.0% | |
| ACATTTACTTGGAAGTGATG+GGG | - | chr6.1:11820993-11821012 | MS.gene66953:CDS | 35.0% | |
| AGACATTTACTTGGAAGTGA+TGG | - | chr6.1:11820991-11821010 | MS.gene66953:CDS | 35.0% | |
| AGAGTAGGTAGTTAGTTACT+GGG | - | chr6.1:11823850-11823869 | MS.gene66953:intron | 35.0% | |
| ATTCGGCTAGAAGAGAATAT+GGG | - | chr6.1:11823380-11823399 | MS.gene66953:intron | 35.0% | |
| ATTTAAAAGACGTCCCTGAA+AGG | - | chr6.1:11825040-11825059 | MS.gene66953:intron | 35.0% | |
| CAGTTAAGAATCATCATGCA+AGG | + | chr6.1:11824262-11824281 | None:intergenic | 35.0% | |
| CCAAGATATACACAATACAC+TGG | - | chr6.1:11824041-11824060 | MS.gene66953:intron | 35.0% | |
| CCAGTGTATTGTGTATATCT+TGG | + | chr6.1:11824044-11824063 | None:intergenic | 35.0% | |
| CGAAAAACAGAGATGATAGA+AGG | + | chr6.1:11823955-11823974 | None:intergenic | 35.0% | |
| CTACTCCTACTTTGATGAAA+TGG | - | chr6.1:11822990-11823009 | MS.gene66953:intron | 35.0% | |
| CTAGTATTCCCCAACAAATA+GGG | - | chr6.1:11823318-11823337 | MS.gene66953:intron | 35.0% | |
| GACATTTACTTGGAAGTGAT+GGG | - | chr6.1:11820992-11821011 | MS.gene66953:CDS | 35.0% | |
| GATTACAGATATTCTGGTCA+AGG | - | chr6.1:11825343-11825362 | MS.gene66953:CDS | 35.0% | |
| GCTATAACAATATGGTACCT+AGG | + | chr6.1:11823442-11823461 | None:intergenic | 35.0% | |
| GTTAGGAAAAGAGATAACAC+AGG | - | chr6.1:11823883-11823902 | MS.gene66953:intron | 35.0% | |
| GTTCATTGGTATTTCTTTGC+TGG | - | chr6.1:11824802-11824821 | MS.gene66953:intron | 35.0% | |
| TAAGTTACATACCAGGTGAT+TGG | + | chr6.1:11821795-11821814 | None:intergenic | 35.0% | |
| TACTTTCAGAGTTGGAGAAT+CGG | - | chr6.1:11821048-11821067 | MS.gene66953:CDS | 35.0% | |
| TAGTATTCCCCAACAAATAG+GGG | - | chr6.1:11823319-11823338 | MS.gene66953:intron | 35.0% | |
| TCCTAGTATGCTTTCTGTTA+AGG | - | chr6.1:11824519-11824538 | MS.gene66953:intron | 35.0% | |
| TCTAGTATTCCCCAACAAAT+AGG | - | chr6.1:11823317-11823336 | MS.gene66953:intron | 35.0% | |
| TCTTAGCCGTTACTTGTAAA+TGG | + | chr6.1:11822088-11822107 | None:intergenic | 35.0% | |
| TGATTAAATCGGCATATCTC+CGG | - | chr6.1:11823635-11823654 | MS.gene66953:intron | 35.0% | |
| TTCCATTCCACGATACTTAT+TGG | - | chr6.1:11821230-11821249 | MS.gene66953:intron | 35.0% | |
| TTCCCATGTTTCAAATAGCA+TGG | - | chr6.1:11822798-11822817 | MS.gene66953:intron | 35.0% | |
| TTGTCCTCAAGAGGAAAATA+AGG | + | chr6.1:11823702-11823721 | None:intergenic | 35.0% | |
| TTGTCCTTTAAACAGGGTAT+TGG | - | chr6.1:11821714-11821733 | MS.gene66953:intron | 35.0% | |
| TTTCATATGCTGTAGTTTCG+GGG | - | chr6.1:11822245-11822264 | MS.gene66953:intron | 35.0% | |
| ! | ACAACTATGGGAATCTTTTG+AGG | - | chr6.1:11823664-11823683 | MS.gene66953:intron | 35.0% |
| ! | ATCCAATAAGTATCGTGGAA+TGG | + | chr6.1:11821235-11821254 | None:intergenic | 35.0% |
| ! | CTATAAACCGAGGTATTCAA+AGG | - | chr6.1:11824876-11824895 | MS.gene66953:intron | 35.0% |
| ! | GTCCATGCTATTTGAAACAT+GGG | + | chr6.1:11822803-11822822 | None:intergenic | 35.0% |
| ! | TCAAAGCTAAAAGGTACAGA+AGG | + | chr6.1:11822041-11822060 | None:intergenic | 35.0% |
| ! | TCCTAATGGCAACTTCATTT+TGG | - | chr6.1:11822533-11822552 | MS.gene66953:intron | 35.0% |
| ! | TCCTTAACAGAAAGCATACT+AGG | + | chr6.1:11824523-11824542 | None:intergenic | 35.0% |
| ! | TGTCCATGCTATTTGAAACA+TGG | + | chr6.1:11822804-11822823 | None:intergenic | 35.0% |
| ! | TTAACAGAAAGCATACTAGG+AGG | + | chr6.1:11824520-11824539 | None:intergenic | 35.0% |
| ! | TTATTTTCCTCTTGAGGACA+AGG | - | chr6.1:11823701-11823720 | MS.gene66953:CDS | 35.0% |
| !! | ACTTGGTTTGGTAGTGTTAT+TGG | - | chr6.1:11823212-11823231 | MS.gene66953:intron | 35.0% |
| !! | CTTTTATTTCTCAGTACTGC+TGG | - | chr6.1:11822629-11822648 | MS.gene66953:intron | 35.0% |
| !! | GAGAAGTACTTATAGGTACA+CGG | - | chr6.1:11823737-11823756 | MS.gene66953:CDS | 35.0% |
| !! | GCTTATATGTTGCTATTTCC+TGG | - | chr6.1:11823557-11823576 | MS.gene66953:CDS | 35.0% |
| !! | TTTGGGTAAGGCCTATTTTT+CGG | - | chr6.1:11822654-11822673 | MS.gene66953:intron | 35.0% |
| !!! | AAGACCTTATTTTCCTCTTG+AGG | - | chr6.1:11823695-11823714 | MS.gene66953:intron | 35.0% |
| ACATGACCTCAAACCCATTT+GGG | - | chr6.1:11822207-11822226 | MS.gene66953:intron | 40.0% | |
| ACGAAGAACGTAAACTCGAT+AGG | - | chr6.1:11824365-11824384 | MS.gene66953:intron | 40.0% | |
| AGATATTCTGGTCAAGGCAA+AGG | - | chr6.1:11825349-11825368 | MS.gene66953:CDS | 40.0% | |
| AGTATTCCCCAACAAATAGG+GGG | - | chr6.1:11823320-11823339 | MS.gene66953:intron | 40.0% | |
| ATGCCTTCGATCAGAAGATT+TGG | + | chr6.1:11821343-11821362 | None:intergenic | 40.0% | |
| CAAAACCATACATTCAGACC+TGG | + | chr6.1:11823924-11823943 | None:intergenic | 40.0% | |
| CAGAGATGATAGAAGGATAG+GGG | + | chr6.1:11823948-11823967 | None:intergenic | 40.0% | |
| CAGAGTAGGTAGTTAGTTAC+TGG | - | chr6.1:11823849-11823868 | MS.gene66953:intron | 40.0% | |
| GACTATTGTCTTGAAGAGCA+AGG | + | chr6.1:11823605-11823624 | None:intergenic | 40.0% | |
| GCAACCAATACCCTGTTTAA+AGG | + | chr6.1:11821721-11821740 | None:intergenic | 40.0% | |
| GCCAAAATGAAGTTGCCATT+AGG | + | chr6.1:11822537-11822556 | None:intergenic | 40.0% | |
| GGAATGATGTGTGTGTTCAT+TGG | - | chr6.1:11824788-11824807 | MS.gene66953:CDS | 40.0% | |
| GGAGTCCATTTCATCAAAGT+AGG | + | chr6.1:11822998-11823017 | None:intergenic | 40.0% | |
| GTAGCAGACTTACAGTGATT+TGG | + | chr6.1:11822299-11822318 | None:intergenic | 40.0% | |
| TACTGGGAACGAATTCAGTT+AGG | - | chr6.1:11823866-11823885 | MS.gene66953:intron | 40.0% | |
| TAGATGTGGCAGTTACGAAA+GGG | - | chr6.1:11823235-11823254 | MS.gene66953:intron | 40.0% | |
| TATTTCTCTGTCAACTGCTC+TGG | + | chr6.1:11822003-11822022 | None:intergenic | 40.0% | |
| TCCAAGAACAATGAAAGCTG+TGG | + | chr6.1:11821743-11821762 | None:intergenic | 40.0% | |
| TGTCTGTGTGTATACTTCCT+AGG | - | chr6.1:11823422-11823441 | MS.gene66953:intron | 40.0% | |
| TTCATATGCTGTAGTTTCGG+GGG | - | chr6.1:11822246-11822265 | MS.gene66953:intron | 40.0% | |
| TTCGGCTAGAAGAGAATATG+GGG | - | chr6.1:11823381-11823400 | MS.gene66953:intron | 40.0% | |
| TTTATAGCTTCTCCTTGCCA+CGG | - | chr6.1:11822927-11822946 | MS.gene66953:intron | 40.0% | |
| TTTGGAAATCACCAATCACC+TGG | - | chr6.1:11821781-11821800 | MS.gene66953:intron | 40.0% | |
| ! | ACACTTTCCATCAAAGGTGT+CGG | + | chr6.1:11822358-11822377 | None:intergenic | 40.0% |
| ! | AGGAAGTATACACACAGACA+TGG | + | chr6.1:11823422-11823441 | None:intergenic | 40.0% |
| ! | AGGACAAGGTGAACGTTTTA+TGG | - | chr6.1:11823715-11823734 | MS.gene66953:CDS | 40.0% |
| ! | ATGTAATCATGTGTCGGTGT+CGG | + | chr6.1:11822409-11822428 | None:intergenic | 40.0% |
| ! | CAGATGACTAGGTTGAATGA+AGG | - | chr6.1:11822746-11822765 | MS.gene66953:intron | 40.0% |
| ! | CAGTGAGCTGCTGATTAAAT+CGG | - | chr6.1:11823624-11823643 | MS.gene66953:intron | 40.0% |
| ! | GGTAGTGTTATTGGTAGATG+TGG | - | chr6.1:11823221-11823240 | MS.gene66953:intron | 40.0% |
| ! | TCTCAGTACTGCTGGATTTT+GGG | - | chr6.1:11822637-11822656 | MS.gene66953:intron | 40.0% |
| ! | TTACGACTGGCTATGTCTAA+TGG | - | chr6.1:11822569-11822588 | MS.gene66953:intron | 40.0% |
| ! | TTCTCAGTACTGCTGGATTT+TGG | - | chr6.1:11822636-11822655 | MS.gene66953:intron | 40.0% |
| ! | TTGATGAAATGGACTCCCTT+AGG | - | chr6.1:11823001-11823020 | MS.gene66953:intron | 40.0% |
| !! | CTACGAAAGCATTTGTGAAG+AGG | - | chr6.1:11823763-11823782 | MS.gene66953:CDS | 40.0% |
| !! | GAACTTCTGCTTGCTATATC+AGG | - | chr6.1:11822184-11822203 | MS.gene66953:intron | 40.0% |
| !! | TGAACTACTAAGCACTGACA+CGG | + | chr6.1:11822483-11822502 | None:intergenic | 40.0% |
| AAAGCTGCAAGAAGTGACTG+CGG | + | chr6.1:11821533-11821552 | None:intergenic | 45.0% | |
| AAATAGGGGGTCAGCAAAGT+AGG | - | chr6.1:11823333-11823352 | MS.gene66953:intron | 45.0% | |
| AAATGTGAAATGTGCAGGCG+AGG | - | chr6.1:11822160-11822179 | MS.gene66953:intron | 45.0% | |
| AATAGGGGGTTTAGCAGAGT+AGG | - | chr6.1:11823835-11823854 | MS.gene66953:intron | 45.0% | |
| ACACAAAGTAAGCGAATGCG+AGG | + | chr6.1:11821580-11821599 | None:intergenic | 45.0% | |
| ACTAGATCGCTGCTAATGAC+AGG | + | chr6.1:11823303-11823322 | None:intergenic | 45.0% | |
| AGGATGTCTTCCAATTCCGT+CGG | + | chr6.1:11823585-11823604 | None:intergenic | 45.0% | |
| CAGTCACTTCTTGCAGCTTT+GGG | - | chr6.1:11821533-11821552 | MS.gene66953:CDS | 45.0% | |
| CATGACCTCAAACCCATTTG+GGG | - | chr6.1:11822208-11822227 | MS.gene66953:intron | 45.0% | |
| CTGGCACCTGATGAATCAAA+AGG | - | chr6.1:11824821-11824840 | MS.gene66953:intron | 45.0% | |
| GACATGACCTCAAACCCATT+TGG | - | chr6.1:11822206-11822225 | MS.gene66953:intron | 45.0% | |
| GCACCAAATCTTCTGATCGA+AGG | - | chr6.1:11821337-11821356 | MS.gene66953:intron | 45.0% | |
| GCCACAGCTTTCATTGTTCT+TGG | - | chr6.1:11821739-11821758 | MS.gene66953:intron | 45.0% | |
| GCGGAGGAAATAGAAGACAT+AGG | + | chr6.1:11821514-11821533 | None:intergenic | 45.0% | |
| GGCAATAGCATACCCCAAAT+GGG | + | chr6.1:11822223-11822242 | None:intergenic | 45.0% | |
| GTAGATGTGGCAGTTACGAA+AGG | - | chr6.1:11823234-11823253 | MS.gene66953:intron | 45.0% | |
| TAGACATAGCCAGTCGTAAG+AGG | + | chr6.1:11822568-11822587 | None:intergenic | 45.0% | |
| TAGCAATCGTTGGCACATTC+AGG | - | chr6.1:11823471-11823490 | MS.gene66953:intron | 45.0% | |
| TCAGAGTTGGAGAATCGGTA+TGG | - | chr6.1:11821053-11821072 | MS.gene66953:CDS | 45.0% | |
| TGAAATGGCAGGAGACACTA+CGG | + | chr6.1:11824962-11824981 | None:intergenic | 45.0% | |
| TTAACTTCTTCGAGTGTCCG+TGG | + | chr6.1:11822947-11822966 | None:intergenic | 45.0% | |
| TTACGGATGTGTCAGTGTCT+TGG | - | chr6.1:11822454-11822473 | MS.gene66953:intron | 45.0% | |
| TTAGGGATGCAAATGGGACA+CGG | - | chr6.1:11824216-11824235 | MS.gene66953:intron | 45.0% | |
| TTCCCATAGTTGTCACAGTC+CGG | + | chr6.1:11823657-11823676 | None:intergenic | 45.0% | |
| TTGCTGACCCCCTATTTGTT+GGG | + | chr6.1:11823330-11823349 | None:intergenic | 45.0% | |
| TTGGCACATTCAGGAATGAG+AGG | - | chr6.1:11823480-11823499 | MS.gene66953:intron | 45.0% | |
| TTTGCTGACCCCCTATTTGT+TGG | + | chr6.1:11823331-11823350 | None:intergenic | 45.0% | |
| ! | AGACGCGAGATCTTTTGTCA+AGG | - | chr6.1:11825307-11825326 | MS.gene66953:CDS | 45.0% |
| ! | CAAGTTGAGGTAGCAATCGT+TGG | - | chr6.1:11823461-11823480 | MS.gene66953:intron | 45.0% |
| ! | CAGTTCTAACCTCTTACGAC+TGG | - | chr6.1:11822556-11822575 | MS.gene66953:intron | 45.0% |
| ! | GAAAGCATACTAGGAGGTTC+CGG | + | chr6.1:11824514-11824533 | None:intergenic | 45.0% |
| ! | GACGCGAGATCTTTTGTCAA+GGG | - | chr6.1:11825308-11825327 | MS.gene66953:CDS | 45.0% |
| ! | GTATTCACATGTGTCGGTGT+CGG | + | chr6.1:11821386-11821405 | None:intergenic | 45.0% |
| ! | GTCTTTGCTGTGTGCTTCTT+CGG | + | chr6.1:11825291-11825310 | None:intergenic | 45.0% |
| !! | CCTTTGATGGAAAGTGTCTC+CGG | - | chr6.1:11822361-11822380 | MS.gene66953:intron | 45.0% |
| !! | GTACTGCTGGATTTTGGGTA+AGG | - | chr6.1:11822642-11822661 | MS.gene66953:intron | 45.0% |
| !! | TACGAAAGGGTGGTGTTGTT+TGG | - | chr6.1:11823248-11823267 | MS.gene66953:intron | 45.0% |
| !! | TCAAGCACTGACACGAACAT+CGG | + | chr6.1:11821464-11821483 | None:intergenic | 45.0% |
| !!! | TTAATTTTTCAAATTTTTTA+CGG | - | chr6.1:11822437-11822456 | MS.gene66953:intron | 5.0% |
| AACTTGACTGCATGCCTGCT+AGG | - | chr6.1:11824427-11824446 | MS.gene66953:intron | 50.0% | |
| ACCTTCGCTAGCACCTCTAA+TGG | + | chr6.1:11823527-11823546 | None:intergenic | 50.0% | |
| ACGTTCACCTTGTCCTCAAG+AGG | + | chr6.1:11823711-11823730 | None:intergenic | 50.0% | |
| ACTGACACGAACATCGGACA+CGG | + | chr6.1:11821458-11821477 | None:intergenic | 50.0% | |
| ATGTGGCAGTTACGAAAGGG+TGG | - | chr6.1:11823238-11823257 | MS.gene66953:intron | 50.0% | |
| CCGGAGACACTTTCCATCAA+AGG | + | chr6.1:11822364-11822383 | None:intergenic | 50.0% | |
| CGGCAATAGCATACCCCAAA+TGG | + | chr6.1:11822224-11822243 | None:intergenic | 50.0% | |
| CTCCGGACTGTGACAACTAT+GGG | - | chr6.1:11823652-11823671 | MS.gene66953:intron | 50.0% | |
| GCAAATGGGACACGGCAATA+TGG | - | chr6.1:11824224-11824243 | MS.gene66953:intron | 50.0% | |
| GCAGTCACTTCTTGCAGCTT+TGG | - | chr6.1:11821532-11821551 | MS.gene66953:CDS | 50.0% | |
| GTACAGAAGGAACGCGACAT+TGG | + | chr6.1:11822028-11822047 | None:intergenic | 50.0% | |
| TACCTGAGCAGCATAGCCAA+AGG | + | chr6.1:11821207-11821226 | None:intergenic | 50.0% | |
| TCAGACCTGGGCGAATTCAT+GGG | + | chr6.1:11823911-11823930 | None:intergenic | 50.0% | |
| TCTCCGGACTGTGACAACTA+TGG | - | chr6.1:11823651-11823670 | MS.gene66953:intron | 50.0% | |
| TGCTAGCGAAGGTAGGATCA+GGG | - | chr6.1:11823534-11823553 | MS.gene66953:CDS | 50.0% | |
| TTCAGACCTGGGCGAATTCA+TGG | + | chr6.1:11823912-11823931 | None:intergenic | 50.0% | |
| TTCCTTTGGCTATGCTGCTC+AGG | - | chr6.1:11821202-11821221 | MS.gene66953:intron | 50.0% | |
| TTCGCCCAGGTCTGAATGTA+TGG | - | chr6.1:11823916-11823935 | MS.gene66953:intron | 50.0% | |
| ! | CTTGGAAGTGATGGGGTACA+TGG | - | chr6.1:11821000-11821019 | MS.gene66953:CDS | 50.0% |
| ! | GCATACCCCAAATGGGTTTG+AGG | + | chr6.1:11822216-11822235 | None:intergenic | 50.0% |
| ! | TGCTGACCCCCTATTTGTTG+GGG | + | chr6.1:11823329-11823348 | None:intergenic | 50.0% |
| !! | TCCATTAGAGGTGCTAGCGA+AGG | - | chr6.1:11823523-11823542 | MS.gene66953:CDS | 50.0% |
| !! | TTAGAGGTGCTAGCGAAGGT+AGG | - | chr6.1:11823527-11823546 | MS.gene66953:CDS | 50.0% |
| !! | TTGCTATTTCCTGGGACCGA+CGG | - | chr6.1:11823566-11823585 | MS.gene66953:CDS | 50.0% |
| AGGGGGTCAGCAAAGTAGGT+TGG | - | chr6.1:11823337-11823356 | MS.gene66953:intron | 55.0% | |
| ATGGCTATCAGCTGCACAGC+TGG | - | chr6.1:11822588-11822607 | MS.gene66953:intron | 55.0% | |
| GCATACTAGGAGGTTCCGGA+AGG | + | chr6.1:11824510-11824529 | None:intergenic | 55.0% | |
| GCTAGCGAAGGTAGGATCAG+GGG | - | chr6.1:11823535-11823554 | MS.gene66953:CDS | 55.0% | |
| GCTGTAGTTTCGGGGGCTAT+AGG | - | chr6.1:11822253-11822272 | MS.gene66953:intron | 55.0% | |
| GGGGGTCAGCAAAGTAGGTT+GGG | - | chr6.1:11823338-11823357 | MS.gene66953:intron | 55.0% | |
| GTGCTAGCGAAGGTAGGATC+AGG | - | chr6.1:11823533-11823552 | MS.gene66953:CDS | 55.0% | |
| TGCCTGCTAGGTGAGGTATG+CGG | - | chr6.1:11824439-11824458 | MS.gene66953:intron | 55.0% | |
| TTCTTCGAGTGTCCGTGGCA+AGG | + | chr6.1:11822942-11822961 | None:intergenic | 55.0% | |
| TTTCCTGGGACCGACGGAAT+TGG | - | chr6.1:11823572-11823591 | MS.gene66953:CDS | 55.0% | |
| ! | GGTCAGCAAAGTAGGTTGGG+AGG | - | chr6.1:11823341-11823360 | MS.gene66953:intron | 55.0% |
| !! | CAAAGGTGTCGGTGCTGCAA+AGG | + | chr6.1:11822347-11822366 | None:intergenic | 55.0% |
| !! | TGCAGCACCGACACCTTTGA+TGG | - | chr6.1:11822348-11822367 | MS.gene66953:intron | 55.0% |
| AGCCGCATACCTCACCTAGC+AGG | + | chr6.1:11824444-11824463 | None:intergenic | 60.0% | |
| AGGTGCCCATGAATTCGCCC+AGG | - | chr6.1:11823903-11823922 | MS.gene66953:intron | 60.0% | |
| CTTCCAATTCCGTCGGTCCC+AGG | + | chr6.1:11823578-11823597 | None:intergenic | 60.0% | |
| GACTGCATGCCTGCTAGGTG+AGG | - | chr6.1:11824432-11824451 | MS.gene66953:intron | 60.0% | |
| GCTGCAAGAAGTGACTGCGG+AGG | + | chr6.1:11821530-11821549 | None:intergenic | 60.0% | |
| !! | TCGGTGTCGTGTAGACGCGT+CGG | + | chr6.1:11822390-11822409 | None:intergenic | 60.0% |
| CGTGTAGACGCGTCGGACAC+CGG | + | chr6.1:11822383-11822402 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 11820985 | 11825370 | 11820985 | ID=MS.gene66953 |
| chr6.1 | mRNA | 11820985 | 11825370 | 11820985 | ID=MS.gene66953.t1;Parent=MS.gene66953 |
| chr6.1 | exon | 11825286 | 11825370 | 11825286 | ID=MS.gene66953.t1.exon1;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11825286 | 11825370 | 11825286 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11825132 | 11825193 | 11825132 | ID=MS.gene66953.t1.exon2;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11825132 | 11825193 | 11825132 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11824734 | 11824819 | 11824734 | ID=MS.gene66953.t1.exon3;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11824734 | 11824819 | 11824734 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11824553 | 11824626 | 11824553 | ID=MS.gene66953.t1.exon4;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11824553 | 11824626 | 11824553 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11824261 | 11824363 | 11824261 | ID=MS.gene66953.t1.exon5;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11824261 | 11824363 | 11824261 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11824050 | 11824178 | 11824050 | ID=MS.gene66953.t1.exon6;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11824050 | 11824178 | 11824050 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11823697 | 11823796 | 11823697 | ID=MS.gene66953.t1.exon7;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11823697 | 11823796 | 11823697 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11823487 | 11823606 | 11823487 | ID=MS.gene66953.t1.exon8;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11823487 | 11823606 | 11823487 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11821513 | 11821603 | 11821513 | ID=MS.gene66953.t1.exon9;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11821513 | 11821603 | 11821513 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11821360 | 11821426 | 11821360 | ID=MS.gene66953.t1.exon10;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11821360 | 11821426 | 11821360 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| chr6.1 | exon | 11820985 | 11821081 | 11820985 | ID=MS.gene66953.t1.exon11;Parent=MS.gene66953.t1 |
| chr6.1 | CDS | 11820985 | 11821081 | 11820985 | ID=cds.MS.gene66953.t1;Parent=MS.gene66953.t1 |
| Gene Sequence |
| Protein sequence |
