Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67269.t1 | XP_003615883.1 | 98.3 | 644 | 11 | 0 | 1 | 644 | 1 | 644 | 0.00E+00 | 1272.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67269.t1 | Q9FGH9 | 69.0 | 638 | 177 | 7 | 1 | 635 | 1 | 620 | 2.2e-255 | 882.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67269.t1 | G7JZR5 | 98.3 | 644 | 11 | 0 | 1 | 644 | 1 | 644 | 0.0e+00 | 1272.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04915 | MS.gene67269 | 0.856242 | 3.67E-62 | -1.69E-46 |
MS.gene04917 | MS.gene67269 | 0.856335 | 3.45E-62 | -1.69E-46 |
MS.gene049685 | MS.gene67269 | 0.821737 | 3.44E-53 | -1.69E-46 |
MS.gene04998 | MS.gene67269 | 0.833311 | 5.74E-56 | -1.69E-46 |
MS.gene050114 | MS.gene67269 | 0.826367 | 2.82E-54 | -1.69E-46 |
MS.gene050317 | MS.gene67269 | 0.808775 | 2.62E-50 | -1.69E-46 |
MS.gene050359 | MS.gene67269 | 0.80127 | 9.75E-49 | -1.69E-46 |
MS.gene050386 | MS.gene67269 | 0.808816 | 2.57E-50 | -1.69E-46 |
MS.gene050654 | MS.gene67269 | 0.805684 | 1.19E-49 | -1.69E-46 |
MS.gene050941 | MS.gene67269 | 0.802349 | 5.85E-49 | -1.69E-46 |
MS.gene051184 | MS.gene67269 | 0.840808 | 6.96E-58 | -1.69E-46 |
MS.gene051809 | MS.gene67269 | 0.801809 | 7.56E-49 | -1.69E-46 |
MS.gene052342 | MS.gene67269 | 0.800596 | 1.34E-48 | -1.69E-46 |
MS.gene056097 | MS.gene67269 | 0.841312 | 5.13E-58 | -1.69E-46 |
MS.gene056181 | MS.gene67269 | 0.804965 | 1.68E-49 | -1.69E-46 |
MS.gene056752 | MS.gene67269 | 0.847915 | 8.55E-60 | -1.69E-46 |
MS.gene056787 | MS.gene67269 | 0.800615 | 1.33E-48 | -1.69E-46 |
MS.gene056849 | MS.gene67269 | 0.828557 | 8.41E-55 | -1.69E-46 |
MS.gene056992 | MS.gene67269 | 0.810728 | 9.98E-51 | -1.69E-46 |
MS.gene057452 | MS.gene67269 | -0.850076 | 2.14E-60 | -1.69E-46 |
MS.gene057999 | MS.gene67269 | 0.822479 | 2.32E-53 | -1.69E-46 |
MS.gene058278 | MS.gene67269 | 0.825478 | 4.59E-54 | -1.69E-46 |
MS.gene058758 | MS.gene67269 | 0.819694 | 1.02E-52 | -1.69E-46 |
MS.gene059007 | MS.gene67269 | 0.819942 | 8.91E-53 | -1.69E-46 |
MS.gene059050 | MS.gene67269 | 0.802424 | 5.65E-49 | -1.69E-46 |
MS.gene060259 | MS.gene67269 | 0.817474 | 3.24E-52 | -1.69E-46 |
MS.gene060563 | MS.gene67269 | 0.835497 | 1.62E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67269.t1 | MTR_5g073450 | 98.292 | 644 | 11 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1315 |
MS.gene67269.t1 | MTR_3g031130 | 69.457 | 645 | 177 | 5 | 1 | 642 | 1 | 628 | 0.0 | 865 |
MS.gene67269.t1 | MTR_5g073460 | 64.574 | 446 | 156 | 2 | 194 | 637 | 251 | 696 | 0.0 | 586 |
MS.gene67269.t1 | MTR_5g073480 | 57.666 | 437 | 119 | 5 | 194 | 627 | 252 | 625 | 5.25e-165 | 486 |
MS.gene67269.t1 | MTR_5g073620 | 62.575 | 334 | 105 | 2 | 194 | 525 | 280 | 595 | 2.04e-131 | 413 |
MS.gene67269.t1 | MTR_5g073620 | 39.147 | 258 | 135 | 4 | 378 | 634 | 833 | 1069 | 5.67e-40 | 157 |
MS.gene67269.t1 | MTR_8g021330 | 41.667 | 456 | 254 | 5 | 201 | 644 | 161 | 616 | 9.08e-124 | 380 |
MS.gene67269.t1 | MTR_4g103540 | 34.294 | 659 | 393 | 10 | 6 | 634 | 33 | 681 | 3.89e-117 | 365 |
MS.gene67269.t1 | MTR_6g033310 | 36.746 | 547 | 309 | 10 | 114 | 644 | 212 | 737 | 8.82e-113 | 355 |
MS.gene67269.t1 | MTR_7g013770 | 33.683 | 668 | 388 | 14 | 6 | 634 | 16 | 667 | 4.98e-111 | 349 |
MS.gene67269.t1 | MTR_7g026630 | 37.989 | 537 | 308 | 10 | 119 | 643 | 137 | 660 | 2.56e-110 | 347 |
MS.gene67269.t1 | MTR_5g074130 | 44.866 | 448 | 225 | 9 | 190 | 631 | 242 | 673 | 2.24e-108 | 344 |
MS.gene67269.t1 | MTR_1g057560 | 32.647 | 631 | 395 | 9 | 22 | 641 | 22 | 633 | 4.27e-108 | 340 |
MS.gene67269.t1 | MTR_1g090620 | 30.864 | 648 | 399 | 10 | 22 | 641 | 23 | 649 | 2.18e-105 | 333 |
MS.gene67269.t1 | MTR_1g117090 | 33.445 | 598 | 336 | 12 | 91 | 642 | 96 | 677 | 3.83e-95 | 307 |
MS.gene67269.t1 | MTR_5g073920 | 39.644 | 449 | 237 | 9 | 196 | 637 | 242 | 663 | 7.15e-92 | 300 |
MS.gene67269.t1 | MTR_3g025900 | 31.303 | 591 | 356 | 13 | 70 | 637 | 49 | 612 | 4.09e-87 | 285 |
MS.gene67269.t1 | MTR_3g464010 | 39.732 | 448 | 242 | 11 | 196 | 635 | 243 | 670 | 1.31e-82 | 274 |
MS.gene67269.t1 | MTR_2g096230 | 28.933 | 553 | 355 | 9 | 94 | 640 | 68 | 588 | 3.00e-82 | 271 |
MS.gene67269.t1 | MTR_5g093530 | 43.324 | 367 | 172 | 5 | 267 | 631 | 238 | 570 | 2.97e-81 | 268 |
MS.gene67269.t1 | MTR_4g062330 | 30.741 | 553 | 346 | 12 | 94 | 631 | 72 | 602 | 1.91e-77 | 259 |
MS.gene67269.t1 | MTR_5g073900 | 44.072 | 388 | 171 | 10 | 219 | 603 | 1 | 345 | 1.03e-74 | 243 |
MS.gene67269.t1 | MTR_5g073770 | 64.550 | 189 | 65 | 1 | 192 | 378 | 191 | 379 | 1.95e-74 | 244 |
MS.gene67269.t1 | MTR_1g067480 | 30.153 | 524 | 326 | 12 | 125 | 631 | 100 | 600 | 1.87e-71 | 242 |
MS.gene67269.t1 | MTR_1g067460 | 28.681 | 523 | 336 | 10 | 125 | 631 | 98 | 599 | 1.72e-65 | 226 |
MS.gene67269.t1 | MTR_5g073490 | 53.846 | 169 | 63 | 1 | 467 | 635 | 3 | 156 | 5.38e-56 | 187 |
MS.gene67269.t1 | MTR_5g073820 | 42.321 | 293 | 76 | 5 | 192 | 481 | 230 | 432 | 2.93e-52 | 187 |
MS.gene67269.t1 | MTR_5g073960 | 49.758 | 207 | 76 | 6 | 177 | 378 | 233 | 416 | 5.19e-45 | 166 |
MS.gene67269.t1 | MTR_5g073780 | 39.669 | 242 | 124 | 4 | 394 | 634 | 4 | 224 | 4.57e-43 | 155 |
MS.gene67269.t1 | MTR_1g009620 | 26.296 | 521 | 333 | 10 | 131 | 642 | 184 | 662 | 4.85e-38 | 150 |
MS.gene67269.t1 | MTR_5g074190 | 34.000 | 300 | 120 | 8 | 336 | 632 | 184 | 408 | 1.85e-31 | 129 |
MS.gene67269.t1 | MTR_5g073650 | 38.384 | 198 | 80 | 3 | 200 | 396 | 171 | 327 | 3.06e-30 | 122 |
MS.gene67269.t1 | MTR_1g017910 | 26.077 | 441 | 267 | 12 | 197 | 599 | 236 | 655 | 4.25e-30 | 126 |
MS.gene67269.t1 | MTR_5g073810 | 38.776 | 196 | 78 | 3 | 202 | 396 | 275 | 429 | 5.47e-28 | 117 |
MS.gene67269.t1 | MTR_4g008260 | 25.339 | 442 | 295 | 12 | 205 | 632 | 220 | 640 | 6.66e-26 | 113 |
MS.gene67269.t1 | MTR_0229s0040 | 31.746 | 189 | 123 | 2 | 458 | 642 | 31 | 217 | 1.89e-22 | 97.1 |
MS.gene67269.t1 | MTR_4g019260 | 45.946 | 74 | 34 | 1 | 267 | 340 | 2 | 69 | 4.08e-13 | 65.1 |
MS.gene67269.t1 | MTR_3g031110 | 63.333 | 60 | 19 | 1 | 279 | 335 | 17 | 76 | 1.58e-12 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67269.t1 | AT5G58430 | 69.279 | 638 | 175 | 7 | 1 | 635 | 1 | 620 | 0.0 | 885 |
MS.gene67269.t1 | AT1G07000 | 49.767 | 645 | 267 | 10 | 1 | 635 | 1 | 598 | 0.0 | 630 |
MS.gene67269.t1 | AT5G50380 | 35.000 | 660 | 386 | 11 | 7 | 634 | 24 | 672 | 1.55e-119 | 371 |
MS.gene67269.t1 | AT5G13990 | 37.990 | 587 | 330 | 14 | 74 | 643 | 124 | 693 | 6.31e-119 | 370 |
MS.gene67269.t1 | AT3G14090 | 36.280 | 543 | 317 | 7 | 126 | 643 | 85 | 623 | 2.79e-118 | 366 |
MS.gene67269.t1 | AT1G72470 | 41.394 | 459 | 250 | 7 | 201 | 644 | 178 | 632 | 3.88e-117 | 363 |
MS.gene67269.t1 | AT5G13150 | 36.986 | 584 | 308 | 14 | 91 | 643 | 99 | 653 | 6.42e-113 | 353 |
MS.gene67269.t1 | AT1G54090 | 39.735 | 453 | 260 | 6 | 201 | 642 | 170 | 620 | 1.72e-112 | 351 |
MS.gene67269.t1 | AT5G03540 | 32.701 | 633 | 385 | 9 | 22 | 635 | 22 | 632 | 1.92e-108 | 341 |
MS.gene67269.t1 | AT5G03540 | 32.675 | 658 | 390 | 11 | 22 | 641 | 22 | 664 | 5.68e-107 | 338 |
MS.gene67269.t1 | AT5G03540 | 39.229 | 441 | 249 | 4 | 204 | 635 | 87 | 517 | 1.07e-105 | 330 |
MS.gene67269.t1 | AT5G52340 | 30.941 | 627 | 409 | 6 | 22 | 641 | 22 | 631 | 1.69e-105 | 333 |
MS.gene67269.t1 | AT3G29400 | 32.340 | 671 | 403 | 16 | 4 | 643 | 7 | 657 | 1.25e-94 | 305 |
MS.gene67269.t1 | AT5G52350 | 33.693 | 463 | 292 | 4 | 176 | 635 | 129 | 579 | 1.31e-84 | 277 |
MS.gene67269.t1 | AT2G39380 | 28.080 | 552 | 370 | 7 | 94 | 634 | 76 | 611 | 5.68e-77 | 258 |
MS.gene67269.t1 | AT5G59730 | 28.618 | 608 | 368 | 14 | 63 | 634 | 22 | 599 | 4.16e-74 | 250 |
MS.gene67269.t1 | AT5G59730 | 28.618 | 608 | 368 | 14 | 63 | 634 | 22 | 599 | 4.47e-74 | 250 |
MS.gene67269.t1 | AT3G55150 | 28.364 | 550 | 371 | 8 | 94 | 634 | 76 | 611 | 7.58e-72 | 244 |
MS.gene67269.t1 | AT5G61010 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 7.74e-72 | 244 |
MS.gene67269.t1 | AT5G61010 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 7.74e-72 | 244 |
MS.gene67269.t1 | AT1G07725 | 28.172 | 536 | 318 | 10 | 125 | 633 | 96 | 591 | 3.86e-71 | 242 |
MS.gene67269.t1 | AT3G09530 | 26.384 | 614 | 416 | 9 | 35 | 633 | 10 | 602 | 1.35e-68 | 236 |
MS.gene67269.t1 | AT2G28640 | 28.298 | 523 | 331 | 8 | 125 | 637 | 94 | 582 | 6.51e-67 | 230 |
MS.gene67269.t1 | AT3G09520 | 28.164 | 561 | 363 | 10 | 89 | 632 | 68 | 605 | 1.50e-65 | 227 |
MS.gene67269.t1 | AT2G28650 | 28.842 | 423 | 278 | 5 | 212 | 631 | 152 | 554 | 2.65e-52 | 189 |
MS.gene67269.t1 | AT4G31540 | 25.775 | 516 | 335 | 9 | 135 | 642 | 190 | 665 | 2.23e-39 | 154 |
MS.gene67269.t1 | AT1G51640 | 24.494 | 445 | 301 | 10 | 209 | 632 | 196 | 626 | 7.97e-25 | 110 |
Find 143 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAGGGTCCTTATAGATTT+TGG | 0.108866 | 5.1:-56728239 | None:intergenic |
CAGCCATGTTGTTATTATTA+TGG | 0.177095 | 5.1:-56726893 | None:intergenic |
CGAATGGTTGCCGGTGGATT+TGG | 0.193761 | 5.1:+56727482 | MS.gene67269:CDS |
TTTCATCAGATCATCCAATT+TGG | 0.196368 | 5.1:+56727075 | MS.gene67269:CDS |
GGAGCGGTTGTTTAAAATTC+TGG | 0.212540 | 5.1:+56727823 | MS.gene67269:CDS |
TCCGGCTAAGGCGGGTGTTC+CGG | 0.217088 | 5.1:+56728006 | MS.gene67269:CDS |
CCGGCTAAGGCGGGTGTTCC+GGG | 0.220217 | 5.1:+56728007 | MS.gene67269:CDS |
CCTTAATCCATGAGCTTCTT+TGG | 0.233529 | 5.1:-56728396 | None:intergenic |
GAAATTGAAAGATGGATTAA+AGG | 0.249788 | 5.1:+56727632 | MS.gene67269:CDS |
AAAACTCAATGATTTGTTTC+AGG | 0.259634 | 5.1:+56728705 | MS.gene67269:CDS |
TCCAAGAGCTTTCACGGCTT+TGG | 0.277854 | 5.1:+56727010 | MS.gene67269:CDS |
AGGAGAGTTTGTCGAGATTA+GGG | 0.287412 | 5.1:+56727552 | MS.gene67269:CDS |
TAAGGTGTTTGGGTTTCTTA+AGG | 0.292868 | 5.1:+56728414 | MS.gene67269:CDS |
AAAGCCGAAGATAGTGAATT+AGG | 0.312797 | 5.1:+56728307 | MS.gene67269:CDS |
AATGGATCAATGCAACATAA+TGG | 0.314221 | 5.1:+56728445 | MS.gene67269:CDS |
AGCTCATGGATTAAGGTGTT+TGG | 0.315385 | 5.1:+56728403 | MS.gene67269:CDS |
TTTCTTAAGGTGGAGAATAA+TGG | 0.326928 | 5.1:+56728427 | MS.gene67269:CDS |
CCAAAGAAGCTCATGGATTA+AGG | 0.329377 | 5.1:+56728396 | MS.gene67269:CDS |
AACATTGCGTGACCTAATTT+CGG | 0.332839 | 5.1:+56727856 | MS.gene67269:CDS |
GCTGATAAATATATTAAGTA+TGG | 0.333613 | 5.1:+56728664 | MS.gene67269:CDS |
ACAACTCAAACTCCGAAATT+AGG | 0.336754 | 5.1:-56727868 | None:intergenic |
AGCAAAATCCAAAATCTATA+AGG | 0.337586 | 5.1:+56728231 | MS.gene67269:CDS |
ATGGATCAATGCAACATAAT+GGG | 0.338830 | 5.1:+56728446 | MS.gene67269:CDS |
TACAGATTTAGCTTCGCTTT+CGG | 0.343027 | 5.1:-56728750 | None:intergenic |
TATCTTTGATGAACAACTTA+AGG | 0.343532 | 5.1:+56728549 | MS.gene67269:CDS |
GAGCAAGTCTTTGAAGACTA+TGG | 0.352862 | 5.1:+56728103 | MS.gene67269:CDS |
TCAGCAGAGTCTGCCCAAAT+TGG | 0.354285 | 5.1:-56727089 | None:intergenic |
TTCATCACGTAACGCGTAAT+CGG | 0.355133 | 5.1:-56728043 | None:intergenic |
GAGGAGAGTTTGTCGAGATT+AGG | 0.359256 | 5.1:+56727551 | MS.gene67269:CDS |
AGCTTCTTTGGTACTGCATA+TGG | 0.365030 | 5.1:-56728384 | None:intergenic |
TCCGTTACCGGCATCGCAAC+CGG | 0.366270 | 5.1:-56727395 | None:intergenic |
GCTCATGGATTAAGGTGTTT+GGG | 0.366445 | 5.1:+56728404 | MS.gene67269:CDS |
GGAGCTATTAGAGAGCAATT+TGG | 0.368249 | 5.1:+56728207 | MS.gene67269:CDS |
TGCTCCTAATTCACTATCTT+CGG | 0.368543 | 5.1:-56728311 | None:intergenic |
GAATGGTTGCCGGTGGATTT+GGG | 0.370483 | 5.1:+56727483 | MS.gene67269:CDS |
TTCGTCTTTGTCGGTGCAAA+TGG | 0.370914 | 5.1:+56728174 | MS.gene67269:CDS |
AAGGCGGGTGTTCCGGGTGG+TGG | 0.371274 | 5.1:+56728013 | MS.gene67269:CDS |
TTCATCAGATCATCCAATTT+GGG | 0.380165 | 5.1:+56727076 | MS.gene67269:CDS |
CAGAGATCCAAGAGCTTTCA+CGG | 0.381140 | 5.1:+56727004 | MS.gene67269:CDS |
TAGTTGCCGGAGAGAATTCT+TGG | 0.391094 | 5.1:+56727529 | MS.gene67269:CDS |
GGTGCAAATGGATTGGATTA+TGG | 0.395788 | 5.1:+56728186 | MS.gene67269:CDS |
TGCATCCTATCATCCATCTT+AGG | 0.400142 | 5.1:-56728145 | None:intergenic |
GCATTCATCTTCGTCTTTGT+CGG | 0.400996 | 5.1:+56728165 | MS.gene67269:CDS |
ATTACTATATGGAAGAGATT+GGG | 0.401127 | 5.1:+56727932 | MS.gene67269:CDS |
CTTTGTCGGTGCAAATGGAT+TGG | 0.403105 | 5.1:+56728179 | MS.gene67269:CDS |
TATTCCGGTACGGCGGAGTT+AGG | 0.407125 | 5.1:-56727295 | None:intergenic |
ACAATTTCATAATCCGTTAC+CGG | 0.411801 | 5.1:-56727407 | None:intergenic |
TTAGCTTCGCTTTCGGCTAC+CGG | 0.424223 | 5.1:-56728743 | None:intergenic |
GGAATGAAGCAATTACTATA+TGG | 0.424616 | 5.1:+56727921 | MS.gene67269:CDS |
TTCGCAGATGCGGTTGCGAT+TGG | 0.427350 | 5.1:+56727788 | MS.gene67269:CDS |
TTTCAAAATGTTGCTGAAGT+TGG | 0.430084 | 5.1:+56728634 | MS.gene67269:CDS |
AAACTCAATGATTTGTTTCA+GGG | 0.430768 | 5.1:+56728706 | MS.gene67269:CDS |
AATTACTATATGGAAGAGAT+TGG | 0.434289 | 5.1:+56727931 | MS.gene67269:CDS |
ATCGCGAAACGAATGGTTGC+CGG | 0.437422 | 5.1:+56727473 | MS.gene67269:CDS |
TCCAAAGCCGTGAAAGCTCT+TGG | 0.438932 | 5.1:-56727011 | None:intergenic |
CGCATGTGTACAGTAGTTGC+CGG | 0.441409 | 5.1:+56727516 | MS.gene67269:CDS |
AATTCACCGAATCGTTATTC+CGG | 0.449218 | 5.1:-56727310 | None:intergenic |
GAATTTGATTCGAAGGGATC+CGG | 0.454380 | 5.1:+56727988 | MS.gene67269:CDS |
ATTATCCTAAGATGGATGAT+AGG | 0.458844 | 5.1:+56728140 | MS.gene67269:CDS |
CCCGGAACACCCGCCTTAGC+CGG | 0.464875 | 5.1:-56728007 | None:intergenic |
TCTGATTCCGGTTGCGATGC+CGG | 0.465064 | 5.1:+56727388 | MS.gene67269:CDS |
TGCGATTGGAAGCCGGTCGC+CGG | 0.467580 | 5.1:+56727802 | MS.gene67269:CDS |
ACAATGAAATTTGCATAAGC+TGG | 0.471843 | 5.1:-56728607 | None:intergenic |
GATTCGAAGGGATCCGGCTA+AGG | 0.472839 | 5.1:+56727994 | MS.gene67269:CDS |
AGATGAGTTTCGTTCTCTCA+TGG | 0.474512 | 5.1:+56727250 | MS.gene67269:CDS |
CAGGGAAGCAGCGGATCAAC+CGG | 0.475342 | 5.1:+56728724 | MS.gene67269:CDS |
TGGTGAAGAGGATCTGATTC+CGG | 0.477953 | 5.1:+56727376 | MS.gene67269:CDS |
TAAACAACCGCTCCGGCGAC+CGG | 0.479945 | 5.1:-56727814 | None:intergenic |
CAAATCTTCTCAAATTTCGA+TGG | 0.480862 | 5.1:+56726927 | MS.gene67269:CDS |
AAGAAAACGTAGCACAAAGC+AGG | 0.482301 | 5.1:-56728256 | None:intergenic |
GGTGTTTGGGTTTCTTAAGG+TGG | 0.482519 | 5.1:+56728417 | MS.gene67269:CDS |
CGGTGTTTGATGATTTATGC+AGG | 0.484441 | 5.1:+56728509 | MS.gene67269:CDS |
TTGAAGATGAAATTGAAAGA+TGG | 0.490489 | 5.1:+56727624 | MS.gene67269:CDS |
ATTGAAGGATTATCCTAAGA+TGG | 0.495216 | 5.1:+56728132 | MS.gene67269:CDS |
ACCGTTTGATTCTGAAGAAG+AGG | 0.499752 | 5.1:+56727334 | MS.gene67269:CDS |
TCCGGTTGCGATGCCGGTAA+CGG | 0.500704 | 5.1:+56727394 | MS.gene67269:CDS |
ATCTTAGGATAATCCTTCAA+TGG | 0.501748 | 5.1:-56728130 | None:intergenic |
ATCAGTATAGTGTGTCTTTG+AGG | 0.503425 | 5.1:+56727900 | MS.gene67269:CDS |
TCCTCTTCTTCAGAATCAAA+CGG | 0.503787 | 5.1:-56727335 | None:intergenic |
GTGTAGGTCGCGGCAGACTT+TGG | 0.505804 | 5.1:+56728081 | MS.gene67269:CDS |
AGTTGGAGAATTTGATTCGA+AGG | 0.519933 | 5.1:+56727981 | MS.gene67269:CDS |
AGTGAGAGATTCGGCGGTCG+AGG | 0.522517 | 5.1:-56727049 | None:intergenic |
TGAGAAAGTCGCTGCGGTCG+AGG | 0.527276 | 5.1:+56726974 | MS.gene67269:CDS |
CGAAGGGATCCGGCTAAGGC+GGG | 0.530606 | 5.1:+56727998 | MS.gene67269:CDS |
ATTACCTTCGTGCTGCGTGT+AGG | 0.531020 | 5.1:+56728065 | MS.gene67269:CDS |
TCGAAGGGATCCGGCTAAGG+CGG | 0.531883 | 5.1:+56727997 | MS.gene67269:CDS |
TGATTCTGAAGAAGAGGATG+AGG | 0.534419 | 5.1:+56727340 | MS.gene67269:CDS |
GCCGTACCGGAATAACGATT+CGG | 0.534490 | 5.1:+56727304 | MS.gene67269:CDS |
TATGCAGGGTTCAATCTACA+TGG | 0.536987 | 5.1:+56728524 | MS.gene67269:CDS |
GTTGGAGAATTTGATTCGAA+GGG | 0.538931 | 5.1:+56727982 | MS.gene67269:CDS |
TGTTCACAAAATGCAGTGGC+AGG | 0.547500 | 5.1:+56727598 | MS.gene67269:CDS |
TCGCATAATCGTCGCTCACT+CGG | 0.551165 | 5.1:-56727683 | None:intergenic |
ATGCGGTTGCGATTGGAAGC+CGG | 0.551749 | 5.1:+56727795 | MS.gene67269:CDS |
TTCGTGCTGCGTGTAGGTCG+CGG | 0.551910 | 5.1:+56728071 | MS.gene67269:CDS |
ACCGAATCGTTATTCCGGTA+CGG | 0.552709 | 5.1:-56727305 | None:intergenic |
TCACGAGATCGCGAAACGAA+TGG | 0.552800 | 5.1:+56727466 | MS.gene67269:CDS |
TTGACCTAACTCCGCCGTAC+CGG | 0.553540 | 5.1:+56727291 | MS.gene67269:CDS |
CTTATGCAAATTTCATTGTG+AGG | 0.557442 | 5.1:+56728611 | MS.gene67269:CDS |
ATGAAACGTAGTGAGAGATT+CGG | 0.558715 | 5.1:-56727058 | None:intergenic |
TTACTATATGGAAGAGATTG+GGG | 0.558787 | 5.1:+56727933 | MS.gene67269:CDS |
TGGATTTATCACCGGTGAGG+TGG | 0.560283 | 5.1:-56727169 | None:intergenic |
AGACTATGGACATCCATTGA+AGG | 0.560704 | 5.1:+56728117 | MS.gene67269:CDS |
TGCAGTACCAAAGAAGCTCA+TGG | 0.561080 | 5.1:+56728389 | MS.gene67269:CDS |
GATGAGGAAATCGACGGTGG+TGG | 0.568555 | 5.1:+56727356 | MS.gene67269:CDS |
GTTGTTGAATTTCGCAGATG+CGG | 0.569479 | 5.1:+56727778 | MS.gene67269:CDS |
TTGGAAGCCGGTCGCCGGAG+CGG | 0.578483 | 5.1:+56727807 | MS.gene67269:CDS |
GCGTGCAAGACACGTGGCGA+TGG | 0.587844 | 5.1:-56727189 | None:intergenic |
TCTCCTCCAAGAATTCTCTC+CGG | 0.592000 | 5.1:-56727535 | None:intergenic |
AATCGACGGTGGTGGTGAAG+AGG | 0.592097 | 5.1:+56727364 | MS.gene67269:CDS |
CACGTGTCTTGCACGCGCTG+AGG | 0.603781 | 5.1:+56727196 | MS.gene67269:CDS |
TTGCCGGAGAGAATTCTTGG+AGG | 0.606882 | 5.1:+56727532 | MS.gene67269:CDS |
GCAGAGTGGAACCACCTCAC+CGG | 0.613195 | 5.1:+56727158 | MS.gene67269:CDS |
GGTGTTTGATGATTTATGCA+GGG | 0.615103 | 5.1:+56728510 | MS.gene67269:CDS |
ACACTCTTTCCCAAATCCAC+CGG | 0.617998 | 5.1:-56727492 | None:intergenic |
AGATCGTTAATCGTCGCTGA+CGG | 0.621884 | 5.1:-56727443 | None:intergenic |
TGGATCAATGCAACATAATG+GGG | 0.624314 | 5.1:+56728447 | MS.gene67269:CDS |
TTTCGATGGAAGATTCTCGA+AGG | 0.631139 | 5.1:+56726941 | MS.gene67269:CDS |
AGAAAACGTAGCACAAAGCA+GGG | 0.636456 | 5.1:-56728255 | None:intergenic |
CGTGGCGATGGATTTATCAC+CGG | 0.638141 | 5.1:-56727177 | None:intergenic |
GAGGTGGTTCCACTCTGCAA+CGG | 0.639466 | 5.1:-56727153 | None:intergenic |
CTCAGCGCGTGCAAGACACG+TGG | 0.639873 | 5.1:-56727195 | None:intergenic |
GCTAAGGCGGGTGTTCCGGG+TGG | 0.643592 | 5.1:+56728010 | MS.gene67269:CDS |
GCGAAACGAATGGTTGCCGG+TGG | 0.645091 | 5.1:+56727476 | MS.gene67269:CDS |
GAAGAGGATGAGGAAATCGA+CGG | 0.652395 | 5.1:+56727350 | MS.gene67269:CDS |
GATTTGTTTCAGGGAAGCAG+CGG | 0.656597 | 5.1:+56728715 | MS.gene67269:CDS |
CGTTCTCTCATGGAACGCGG+TGG | 0.656643 | 5.1:+56727260 | MS.gene67269:CDS |
CGATGGATTTATCACCGGTG+AGG | 0.664178 | 5.1:-56727172 | None:intergenic |
AGAAGAGAAATTACTCGCTG+TGG | 0.664906 | 5.1:+56726845 | MS.gene67269:CDS |
ATCGGATGTAGTCCACCACC+CGG | 0.665264 | 5.1:-56728025 | None:intergenic |
TAGTAGCTTCCGTTGCAGAG+TGG | 0.667358 | 5.1:+56727144 | MS.gene67269:CDS |
ATATATTAAGTATGGAACAG+AGG | 0.672378 | 5.1:+56728672 | MS.gene67269:CDS |
TTTCGTTCTCTCATGGAACG+CGG | 0.674207 | 5.1:+56727257 | MS.gene67269:CDS |
AAGATGTTCACAAAATGCAG+TGG | 0.676259 | 5.1:+56727594 | MS.gene67269:CDS |
AACGGCGTCGAGAAAAGCAG+CGG | 0.676927 | 5.1:-56727114 | None:intergenic |
GGAAGCTACTAAGTCGTCAA+CGG | 0.681900 | 5.1:-56727132 | None:intergenic |
TACTATATGGAAGAGATTGG+GGG | 0.699675 | 5.1:+56727934 | MS.gene67269:CDS |
AAACGTAGTGAGAGATTCGG+CGG | 0.706086 | 5.1:-56727055 | None:intergenic |
GAGGATGAGGAAATCGACGG+TGG | 0.709462 | 5.1:+56727353 | MS.gene67269:CDS |
AGGCCATAATAATAACAACA+TGG | 0.709937 | 5.1:+56726890 | MS.gene67269:CDS |
GCGACCTACACGCAGCACGA+AGG | 0.713813 | 5.1:-56728069 | None:intergenic |
TCTTTCTGAGAAAGTCGCTG+CGG | 0.726564 | 5.1:+56726968 | MS.gene67269:CDS |
GAATCGTTATTCCGGTACGG+CGG | 0.733458 | 5.1:-56727302 | None:intergenic |
GAAGCTGAAATCATTCAACA+CGG | 0.746033 | 5.1:+56728489 | MS.gene67269:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GCTGATAAATATATTAAGTA+TGG | + | chr5.1:56728664-56728683 | MS.gene67269:CDS | 20.0% |
! | AAAAACACACTGCAAAAATT+CGG | + | chr5.1:56728356-56728375 | MS.gene67269:CDS | 25.0% |
! | AATTACTATATGGAAGAGAT+TGG | + | chr5.1:56727931-56727950 | MS.gene67269:CDS | 25.0% |
! | AGCAAAATCCAAAATCTATA+AGG | + | chr5.1:56728231-56728250 | MS.gene67269:CDS | 25.0% |
! | ATATATTAAGTATGGAACAG+AGG | + | chr5.1:56728672-56728691 | MS.gene67269:CDS | 25.0% |
! | ATTACTATATGGAAGAGATT+GGG | + | chr5.1:56727932-56727951 | MS.gene67269:CDS | 25.0% |
! | TATCTTTGATGAACAACTTA+AGG | + | chr5.1:56728549-56728568 | MS.gene67269:CDS | 25.0% |
! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5.1:56727624-56727643 | MS.gene67269:CDS | 25.0% |
!! | TTTTCTTGATGAATAATTGC+AGG | + | chr5.1:56728272-56728291 | MS.gene67269:CDS | 25.0% |
!!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5.1:56728705-56728724 | MS.gene67269:CDS | 25.0% |
!!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5.1:56728706-56728725 | MS.gene67269:CDS | 25.0% |
!!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5.1:56727632-56727651 | MS.gene67269:CDS | 25.0% |
AATGGATCAATGCAACATAA+TGG | + | chr5.1:56728445-56728464 | MS.gene67269:CDS | 30.0% | |
ACAATGAAATTTGCATAAGC+TGG | - | chr5.1:56728610-56728629 | None:intergenic | 30.0% | |
ACAATTTCATAATCCGTTAC+CGG | - | chr5.1:56727410-56727429 | None:intergenic | 30.0% | |
AGGCCATAATAATAACAACA+TGG | + | chr5.1:56726890-56726909 | MS.gene67269:CDS | 30.0% | |
ATCTTAGGATAATCCTTCAA+TGG | - | chr5.1:56728133-56728152 | None:intergenic | 30.0% | |
ATGGATCAATGCAACATAAT+GGG | + | chr5.1:56728446-56728465 | MS.gene67269:CDS | 30.0% | |
ATTATCCTAAGATGGATGAT+AGG | + | chr5.1:56728140-56728159 | MS.gene67269:CDS | 30.0% | |
ATTGAAGGATTATCCTAAGA+TGG | + | chr5.1:56728132-56728151 | MS.gene67269:CDS | 30.0% | |
CAAATCTTCTCAAATTTCGA+TGG | + | chr5.1:56726927-56726946 | MS.gene67269:CDS | 30.0% | |
CTTATGCAAATTTCATTGTG+AGG | + | chr5.1:56728611-56728630 | MS.gene67269:CDS | 30.0% | |
GGAATGAAGCAATTACTATA+TGG | + | chr5.1:56727921-56727940 | MS.gene67269:CDS | 30.0% | |
TTACTATATGGAAGAGATTG+GGG | + | chr5.1:56727933-56727952 | MS.gene67269:CDS | 30.0% | |
TTCATCAGATCATCCAATTT+GGG | + | chr5.1:56727076-56727095 | MS.gene67269:CDS | 30.0% | |
TTTCAAAATGTTGCTGAAGT+TGG | + | chr5.1:56728634-56728653 | MS.gene67269:CDS | 30.0% | |
TTTCATCAGATCATCCAATT+TGG | + | chr5.1:56727075-56727094 | MS.gene67269:CDS | 30.0% | |
TTTCTTAAGGTGGAGAATAA+TGG | + | chr5.1:56728427-56728446 | MS.gene67269:CDS | 30.0% | |
! | AGCAATTAGAGGGATTTTTA+TGG | + | chr5.1:56727958-56727977 | MS.gene67269:CDS | 30.0% |
! | AGCTGCAGATTTTTCTTTTA+TGG | + | chr5.1:56727730-56727749 | MS.gene67269:CDS | 30.0% |
! | CAGCCATGTTGTTATTATTA+TGG | - | chr5.1:56726896-56726915 | None:intergenic | 30.0% |
! | TGCAGATTTTTCTTTTATGG+AGG | + | chr5.1:56727733-56727752 | MS.gene67269:CDS | 30.0% |
AAAAGAAAAATCTGCAGCTG+AGG | - | chr5.1:56727729-56727748 | None:intergenic | 35.0% | |
AAAGCCGAAGATAGTGAATT+AGG | + | chr5.1:56728307-56728326 | MS.gene67269:CDS | 35.0% | |
AACATTGCGTGACCTAATTT+CGG | + | chr5.1:56727856-56727875 | MS.gene67269:CDS | 35.0% | |
AAGATGTTCACAAAATGCAG+TGG | + | chr5.1:56727594-56727613 | MS.gene67269:CDS | 35.0% | |
AATTCACCGAATCGTTATTC+CGG | - | chr5.1:56727313-56727332 | None:intergenic | 35.0% | |
ACAACTCAAACTCCGAAATT+AGG | - | chr5.1:56727871-56727890 | None:intergenic | 35.0% | |
ATCAGTATAGTGTGTCTTTG+AGG | + | chr5.1:56727900-56727919 | MS.gene67269:CDS | 35.0% | |
ATGAAACGTAGTGAGAGATT+CGG | - | chr5.1:56727061-56727080 | None:intergenic | 35.0% | |
GAAGCTGAAATCATTCAACA+CGG | + | chr5.1:56728489-56728508 | MS.gene67269:CDS | 35.0% | |
TACTATATGGAAGAGATTGG+GGG | + | chr5.1:56727934-56727953 | MS.gene67269:CDS | 35.0% | |
TCCTCTTCTTCAGAATCAAA+CGG | - | chr5.1:56727338-56727357 | None:intergenic | 35.0% | |
TGCTCCTAATTCACTATCTT+CGG | - | chr5.1:56728314-56728333 | None:intergenic | 35.0% | |
TGGATCAATGCAACATAATG+GGG | + | chr5.1:56728447-56728466 | MS.gene67269:CDS | 35.0% | |
! | AGAATTTTAAACAACCGCTC+CGG | - | chr5.1:56727824-56727843 | None:intergenic | 35.0% |
! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5.1:56727981-56728000 | MS.gene67269:CDS | 35.0% |
! | GGTGTTTGATGATTTATGCA+GGG | + | chr5.1:56728510-56728529 | MS.gene67269:CDS | 35.0% |
! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5.1:56727982-56728001 | MS.gene67269:CDS | 35.0% |
! | TAAGGTGTTTGGGTTTCTTA+AGG | + | chr5.1:56728414-56728433 | MS.gene67269:CDS | 35.0% |
! | TAGAGGGATTTTTATGGAGT+TGG | + | chr5.1:56727964-56727983 | MS.gene67269:CDS | 35.0% |
! | TCTTTTATGGAGGTTTGTAG+AGG | + | chr5.1:56727743-56727762 | MS.gene67269:CDS | 35.0% |
!!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5.1:56728319-56728338 | MS.gene67269:CDS | 35.0% |
AAGAAAACGTAGCACAAAGC+AGG | - | chr5.1:56728259-56728278 | None:intergenic | 40.0% | |
AGAAAACGTAGCACAAAGCA+GGG | - | chr5.1:56728258-56728277 | None:intergenic | 40.0% | |
AGAAGAGAAATTACTCGCTG+TGG | + | chr5.1:56726845-56726864 | MS.gene67269:CDS | 40.0% | |
AGACTATGGACATCCATTGA+AGG | + | chr5.1:56728117-56728136 | MS.gene67269:CDS | 40.0% | |
AGATGAGTTTCGTTCTCTCA+TGG | + | chr5.1:56727250-56727269 | MS.gene67269:CDS | 40.0% | |
AGCTTCTTTGGTACTGCATA+TGG | - | chr5.1:56728387-56728406 | None:intergenic | 40.0% | |
AGGAGAGTTTGTCGAGATTA+GGG | + | chr5.1:56727552-56727571 | MS.gene67269:CDS | 40.0% | |
CCTTAATCCATGAGCTTCTT+TGG | - | chr5.1:56728399-56728418 | None:intergenic | 40.0% | |
GCATTCATCTTCGTCTTTGT+CGG | + | chr5.1:56728165-56728184 | MS.gene67269:CDS | 40.0% | |
GGAGCTATTAGAGAGCAATT+TGG | + | chr5.1:56728207-56728226 | MS.gene67269:CDS | 40.0% | |
GTTGTTGAATTTCGCAGATG+CGG | + | chr5.1:56727778-56727797 | MS.gene67269:CDS | 40.0% | |
TATGCAGGGTTCAATCTACA+TGG | + | chr5.1:56728524-56728543 | MS.gene67269:CDS | 40.0% | |
TGCATCCTATCATCCATCTT+AGG | - | chr5.1:56728148-56728167 | None:intergenic | 40.0% | |
TTCATCACGTAACGCGTAAT+CGG | - | chr5.1:56728046-56728065 | None:intergenic | 40.0% | |
TTTCGATGGAAGATTCTCGA+AGG | + | chr5.1:56726941-56726960 | MS.gene67269:CDS | 40.0% | |
! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5.1:56727334-56727353 | MS.gene67269:CDS | 40.0% |
! | AGCAGGGTCCTTATAGATTT+TGG | - | chr5.1:56728242-56728261 | None:intergenic | 40.0% |
! | AGCTCATGGATTAAGGTGTT+TGG | + | chr5.1:56728403-56728422 | MS.gene67269:CDS | 40.0% |
! | CCAAAGAAGCTCATGGATTA+AGG | + | chr5.1:56728396-56728415 | MS.gene67269:CDS | 40.0% |
! | CGGTGTTTGATGATTTATGC+AGG | + | chr5.1:56728509-56728528 | MS.gene67269:CDS | 40.0% |
! | GAATTTGATTCGAAGGGATC+CGG | + | chr5.1:56727988-56728007 | MS.gene67269:CDS | 40.0% |
! | GAGCAAGTCTTTGAAGACTA+TGG | + | chr5.1:56728103-56728122 | MS.gene67269:CDS | 40.0% |
! | GCTCATGGATTAAGGTGTTT+GGG | + | chr5.1:56728404-56728423 | MS.gene67269:CDS | 40.0% |
! | GGAGCGGTTGTTTAAAATTC+TGG | + | chr5.1:56727823-56727842 | MS.gene67269:CDS | 40.0% |
! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5.1:56727340-56727359 | MS.gene67269:CDS | 40.0% |
!! | GAGCACTTTTAGGAGATGAT+TGG | + | chr5.1:56728329-56728348 | MS.gene67269:CDS | 40.0% |
!! | GGTGCAAATGGATTGGATTA+TGG | + | chr5.1:56728186-56728205 | MS.gene67269:CDS | 40.0% |
!!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5.1:56727698-56727717 | MS.gene67269:CDS | 40.0% |
AAACGTAGTGAGAGATTCGG+CGG | - | chr5.1:56727058-56727077 | None:intergenic | 45.0% | |
ACACTCTTTCCCAAATCCAC+CGG | - | chr5.1:56727495-56727514 | None:intergenic | 45.0% | |
ACCGAATCGTTATTCCGGTA+CGG | - | chr5.1:56727308-56727327 | None:intergenic | 45.0% | |
AGATCGTTAATCGTCGCTGA+CGG | - | chr5.1:56727446-56727465 | None:intergenic | 45.0% | |
AGATTGGGGGAAGCAATTAG+AGG | + | chr5.1:56727947-56727966 | MS.gene67269:CDS | 45.0% | |
CAGAGATCCAAGAGCTTTCA+CGG | + | chr5.1:56727004-56727023 | MS.gene67269:CDS | 45.0% | |
CGTCACATAGCAAAAACGCT+AGG | + | chr5.1:56726870-56726889 | MS.gene67269:CDS | 45.0% | |
CTTTGTCGGTGCAAATGGAT+TGG | + | chr5.1:56728179-56728198 | MS.gene67269:CDS | 45.0% | |
GAAGAGGATGAGGAAATCGA+CGG | + | chr5.1:56727350-56727369 | MS.gene67269:CDS | 45.0% | |
GAGGAGAGTTTGTCGAGATT+AGG | + | chr5.1:56727551-56727570 | MS.gene67269:CDS | 45.0% | |
GATTGGGGGAAGCAATTAGA+GGG | + | chr5.1:56727948-56727967 | MS.gene67269:CDS | 45.0% | |
GGAAGCTACTAAGTCGTCAA+CGG | - | chr5.1:56727135-56727154 | None:intergenic | 45.0% | |
TAGTTGCCGGAGAGAATTCT+TGG | + | chr5.1:56727529-56727548 | MS.gene67269:CDS | 45.0% | |
TCTCCTCCAAGAATTCTCTC+CGG | - | chr5.1:56727538-56727557 | None:intergenic | 45.0% | |
TGCAGTACCAAAGAAGCTCA+TGG | + | chr5.1:56728389-56728408 | MS.gene67269:CDS | 45.0% | |
TGGTGAAGAGGATCTGATTC+CGG | + | chr5.1:56727376-56727395 | MS.gene67269:CDS | 45.0% | |
TGTTCACAAAATGCAGTGGC+AGG | + | chr5.1:56727598-56727617 | MS.gene67269:CDS | 45.0% | |
TTCGTCTTTGTCGGTGCAAA+TGG | + | chr5.1:56728174-56728193 | MS.gene67269:CDS | 45.0% | |
TTTCGTTCTCTCATGGAACG+CGG | + | chr5.1:56727257-56727276 | MS.gene67269:CDS | 45.0% | |
! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5.1:56728715-56728734 | MS.gene67269:CDS | 45.0% |
! | GGTGTTTGGGTTTCTTAAGG+TGG | + | chr5.1:56728417-56728436 | MS.gene67269:CDS | 45.0% |
! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5.1:56726968-56726987 | MS.gene67269:CDS | 45.0% |
ATCGCGAAACGAATGGTTGC+CGG | + | chr5.1:56727473-56727492 | MS.gene67269:CDS | 50.0% | |
ATTACCTTCGTGCTGCGTGT+AGG | + | chr5.1:56728065-56728084 | MS.gene67269:CDS | 50.0% | |
CGCATGTGTACAGTAGTTGC+CGG | + | chr5.1:56727516-56727535 | MS.gene67269:CDS | 50.0% | |
GAATCGTTATTCCGGTACGG+CGG | - | chr5.1:56727305-56727324 | None:intergenic | 50.0% | |
GCCGTACCGGAATAACGATT+CGG | + | chr5.1:56727304-56727323 | MS.gene67269:CDS | 50.0% | |
TAGTAGCTTCCGTTGCAGAG+TGG | + | chr5.1:56727144-56727163 | MS.gene67269:CDS | 50.0% | |
TCACGAGATCGCGAAACGAA+TGG | + | chr5.1:56727466-56727485 | MS.gene67269:CDS | 50.0% | |
TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5.1:56727092-56727111 | None:intergenic | 50.0% | |
TCCAAAGCCGTGAAAGCTCT+TGG | - | chr5.1:56727014-56727033 | None:intergenic | 50.0% | |
TCCAAGAGCTTTCACGGCTT+TGG | + | chr5.1:56727010-56727029 | MS.gene67269:CDS | 50.0% | |
TCGCATAATCGTCGCTCACT+CGG | - | chr5.1:56727686-56727705 | None:intergenic | 50.0% | |
TGGATTTATCACCGGTGAGG+TGG | - | chr5.1:56727172-56727191 | None:intergenic | 50.0% | |
TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5.1:56728746-56728765 | None:intergenic | 50.0% | |
TTGCCGGAGAGAATTCTTGG+AGG | + | chr5.1:56727532-56727551 | MS.gene67269:CDS | 50.0% | |
! | CGATGGATTTATCACCGGTG+AGG | - | chr5.1:56727175-56727194 | None:intergenic | 50.0% |
! | CGTGGCGATGGATTTATCAC+CGG | - | chr5.1:56727180-56727199 | None:intergenic | 50.0% |
! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5.1:56727483-56727502 | MS.gene67269:CDS | 50.0% |
ATCGGATGTAGTCCACCACC+CGG | - | chr5.1:56728028-56728047 | None:intergenic | 55.0% | |
ATGCGGTTGCGATTGGAAGC+CGG | + | chr5.1:56727795-56727814 | MS.gene67269:CDS | 55.0% | |
GAGGATGAGGAAATCGACGG+TGG | + | chr5.1:56727353-56727372 | MS.gene67269:CDS | 55.0% | |
GAGGTGGTTCCACTCTGCAA+CGG | - | chr5.1:56727156-56727175 | None:intergenic | 55.0% | |
GATGAGGAAATCGACGGTGG+TGG | + | chr5.1:56727356-56727375 | MS.gene67269:CDS | 55.0% | |
GATTCGAAGGGATCCGGCTA+AGG | + | chr5.1:56727994-56728013 | MS.gene67269:CDS | 55.0% | |
TATTCCGGTACGGCGGAGTT+AGG | - | chr5.1:56727298-56727317 | None:intergenic | 55.0% | |
TCTGATTCCGGTTGCGATGC+CGG | + | chr5.1:56727388-56727407 | MS.gene67269:CDS | 55.0% | |
TTCGCAGATGCGGTTGCGAT+TGG | + | chr5.1:56727788-56727807 | MS.gene67269:CDS | 55.0% | |
TTGACCTAACTCCGCCGTAC+CGG | + | chr5.1:56727291-56727310 | MS.gene67269:CDS | 55.0% | |
! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5.1:56727117-56727136 | None:intergenic | 55.0% |
! | AATCGACGGTGGTGGTGAAG+AGG | + | chr5.1:56727364-56727383 | MS.gene67269:CDS | 55.0% |
! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5.1:56727482-56727501 | MS.gene67269:CDS | 55.0% |
AGTGAGAGATTCGGCGGTCG+AGG | - | chr5.1:56727052-56727071 | None:intergenic | 60.0% | |
CAGGGAAGCAGCGGATCAAC+CGG | + | chr5.1:56728724-56728743 | MS.gene67269:CDS | 60.0% | |
CGTTCTCTCATGGAACGCGG+TGG | + | chr5.1:56727260-56727279 | MS.gene67269:CDS | 60.0% | |
GCAGAGTGGAACCACCTCAC+CGG | + | chr5.1:56727158-56727177 | MS.gene67269:CDS | 60.0% | |
GCGAAACGAATGGTTGCCGG+TGG | + | chr5.1:56727476-56727495 | MS.gene67269:CDS | 60.0% | |
GTGTAGGTCGCGGCAGACTT+TGG | + | chr5.1:56728081-56728100 | MS.gene67269:CDS | 60.0% | |
TAAACAACCGCTCCGGCGAC+CGG | - | chr5.1:56727817-56727836 | None:intergenic | 60.0% | |
TCCGGTTGCGATGCCGGTAA+CGG | + | chr5.1:56727394-56727413 | MS.gene67269:CDS | 60.0% | |
TCCGTTACCGGCATCGCAAC+CGG | - | chr5.1:56727398-56727417 | None:intergenic | 60.0% | |
TCGAAGGGATCCGGCTAAGG+CGG | + | chr5.1:56727997-56728016 | MS.gene67269:CDS | 60.0% | |
TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5.1:56726974-56726993 | MS.gene67269:CDS | 60.0% | |
TTCGTGCTGCGTGTAGGTCG+CGG | + | chr5.1:56728071-56728090 | MS.gene67269:CDS | 60.0% | |
CACGTGTCTTGCACGCGCTG+AGG | + | chr5.1:56727196-56727215 | MS.gene67269:CDS | 65.0% | |
CGAAGGGATCCGGCTAAGGC+GGG | + | chr5.1:56727998-56728017 | MS.gene67269:CDS | 65.0% | |
CTCAGCGCGTGCAAGACACG+TGG | - | chr5.1:56727198-56727217 | None:intergenic | 65.0% | |
GCGACCTACACGCAGCACGA+AGG | - | chr5.1:56728072-56728091 | None:intergenic | 65.0% | |
GCGTGCAAGACACGTGGCGA+TGG | - | chr5.1:56727192-56727211 | None:intergenic | 65.0% | |
TCCGGCTAAGGCGGGTGTTC+CGG | + | chr5.1:56728006-56728025 | MS.gene67269:CDS | 65.0% | |
TGCGATTGGAAGCCGGTCGC+CGG | + | chr5.1:56727802-56727821 | MS.gene67269:CDS | 65.0% | |
AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5.1:56728013-56728032 | MS.gene67269:CDS | 70.0% | |
CCCGGAACACCCGCCTTAGC+CGG | - | chr5.1:56728010-56728029 | None:intergenic | 70.0% | |
CCGGCTAAGGCGGGTGTTCC+GGG | + | chr5.1:56728007-56728026 | MS.gene67269:CDS | 70.0% | |
GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5.1:56728010-56728029 | MS.gene67269:CDS | 70.0% | |
TTGGAAGCCGGTCGCCGGAG+CGG | + | chr5.1:56727807-56727826 | MS.gene67269:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 56726831 | 56728765 | 56726831 | ID=MS.gene67269 |
chr5.1 | mRNA | 56726831 | 56728765 | 56726831 | ID=MS.gene67269.t1;Parent=MS.gene67269 |
chr5.1 | exon | 56726831 | 56728765 | 56726831 | ID=MS.gene67269.t1.exon1;Parent=MS.gene67269.t1 |
chr5.1 | CDS | 56726831 | 56728765 | 56726831 | ID=cds.MS.gene67269.t1;Parent=MS.gene67269.t1 |
Gene Sequence |
Protein sequence |