Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68029.t1 | XP_003612119.2 | 96.6 | 1265 | 33 | 1 | 1 | 1255 | 1 | 1265 | 0.00E+00 | 2231.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68029.t1 | Q9SD34 | 38.7 | 1301 | 610 | 30 | 64 | 1255 | 71 | 1292 | 1.6e-177 | 625.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68029.t1 | G7KGD4 | 96.6 | 1265 | 33 | 1 | 1 | 1255 | 1 | 1265 | 0.0e+00 | 2231.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene68029.t1 | TR | SWI/SNF-BAF60b |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene68029 | 0.819815 | 9.53E-53 | -1.69E-46 |
MS.gene049343 | MS.gene68029 | 0.841132 | 5.72E-58 | -1.69E-46 |
MS.gene049499 | MS.gene68029 | 0.806949 | 6.42E-50 | -1.69E-46 |
MS.gene049983 | MS.gene68029 | 0.826806 | 2.22E-54 | -1.69E-46 |
MS.gene051744 | MS.gene68029 | 0.803602 | 3.22E-49 | -1.69E-46 |
MS.gene053226 | MS.gene68029 | 0.809835 | 1.56E-50 | -1.69E-46 |
MS.gene054479 | MS.gene68029 | 0.800376 | 1.48E-48 | -1.69E-46 |
MS.gene054651 | MS.gene68029 | 0.82656 | 2.54E-54 | -1.69E-46 |
MS.gene056050 | MS.gene68029 | 0.83539 | 1.73E-56 | -1.69E-46 |
MS.gene056174 | MS.gene68029 | 0.828759 | 7.52E-55 | -1.69E-46 |
MS.gene056539 | MS.gene68029 | 0.802119 | 6.53E-49 | -1.69E-46 |
MS.gene056699 | MS.gene68029 | 0.809263 | 2.06E-50 | -1.69E-46 |
MS.gene056776 | MS.gene68029 | 0.814564 | 1.44E-51 | -1.69E-46 |
MS.gene05686 | MS.gene68029 | 0.818462 | 1.94E-52 | -1.69E-46 |
MS.gene057155 | MS.gene68029 | 0.80609 | 9.74E-50 | -1.69E-46 |
MS.gene057208 | MS.gene68029 | 0.814705 | 1.34E-51 | -1.69E-46 |
MS.gene057855 | MS.gene68029 | 0.822209 | 2.68E-53 | -1.69E-46 |
MS.gene058008 | MS.gene68029 | 0.807347 | 5.28E-50 | -1.69E-46 |
MS.gene058009 | MS.gene68029 | 0.820065 | 8.35E-53 | -1.69E-46 |
MS.gene058783 | MS.gene68029 | 0.808992 | 2.36E-50 | -1.69E-46 |
MS.gene058979 | MS.gene68029 | 0.815526 | 8.84E-52 | -1.69E-46 |
MS.gene060348 | MS.gene68029 | 0.804326 | 2.28E-49 | -1.69E-46 |
MS.gene060352 | MS.gene68029 | 0.802457 | 5.56E-49 | -1.69E-46 |
MS.gene060353 | MS.gene68029 | 0.803523 | 3.35E-49 | -1.69E-46 |
MS.gene060522 | MS.gene68029 | 0.801189 | 1.01E-48 | -1.69E-46 |
MS.gene060933 | MS.gene68029 | 0.804858 | 1.76E-49 | -1.69E-46 |
MS.gene060935 | MS.gene68029 | 0.840786 | 7.05E-58 | -1.69E-46 |
MS.gene060937 | MS.gene68029 | 0.840414 | 8.82E-58 | -1.69E-46 |
MS.gene061100 | MS.gene68029 | 0.811279 | 7.58E-51 | -1.69E-46 |
MS.gene061160 | MS.gene68029 | 0.80013 | 1.66E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68029.t1 | MTR_5g021500 | 96.680 | 1265 | 32 | 1 | 1 | 1255 | 1 | 1265 | 0.0 | 2536 |
MS.gene68029.t1 | MTR_3g117490 | 58.106 | 549 | 212 | 6 | 93 | 629 | 224 | 766 | 0.0 | 620 |
MS.gene68029.t1 | MTR_3g117490 | 47.826 | 92 | 47 | 1 | 694 | 784 | 882 | 973 | 9.30e-19 | 93.2 |
MS.gene68029.t1 | MTR_3g117490 | 41.441 | 111 | 57 | 6 | 1147 | 1254 | 1280 | 1385 | 7.15e-12 | 70.9 |
MS.gene68029.t1 | MTR_5g021450 | 65.236 | 233 | 71 | 6 | 60 | 287 | 33 | 260 | 4.90e-91 | 309 |
MS.gene68029.t1 | MTR_5g021450 | 36.149 | 509 | 186 | 9 | 640 | 1099 | 249 | 667 | 4.15e-67 | 241 |
MS.gene68029.t1 | MTR_5g021450 | 65.236 | 233 | 71 | 6 | 60 | 287 | 33 | 260 | 7.11e-91 | 309 |
MS.gene68029.t1 | MTR_5g021450 | 38.039 | 510 | 202 | 9 | 640 | 1099 | 249 | 694 | 5.77e-77 | 270 |
MS.gene68029.t1 | MTR_3g064260 | 29.636 | 577 | 344 | 16 | 97 | 639 | 15 | 563 | 9.05e-60 | 221 |
MS.gene68029.t1 | MTR_3g064270 | 27.671 | 571 | 365 | 10 | 97 | 640 | 15 | 564 | 8.61e-57 | 212 |
MS.gene68029.t1 | MTR_3g064250 | 28.675 | 551 | 350 | 12 | 93 | 615 | 9 | 544 | 1.89e-56 | 211 |
MS.gene68029.t1 | MTR_3g064280 | 29.145 | 573 | 347 | 17 | 97 | 635 | 15 | 562 | 2.68e-51 | 195 |
MS.gene68029.t1 | MTR_3g064300 | 40.000 | 120 | 72 | 0 | 97 | 216 | 15 | 134 | 9.96e-25 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68029.t1 | AT3G51120 | 50.066 | 763 | 315 | 14 | 64 | 795 | 71 | 798 | 0.0 | 692 |
MS.gene68029.t1 | AT2G16485 | 46.125 | 787 | 343 | 16 | 96 | 811 | 598 | 1374 | 0.0 | 644 |
MS.gene68029.t1 | AT2G16485 | 45.262 | 802 | 343 | 16 | 96 | 811 | 598 | 1389 | 0.0 | 638 |
MS.gene68029.t1 | AT2G18090 | 52.778 | 324 | 143 | 3 | 86 | 399 | 68 | 391 | 3.37e-114 | 376 |
MS.gene68029.t1 | AT2G18090 | 35.211 | 355 | 210 | 9 | 718 | 1063 | 448 | 791 | 3.24e-37 | 152 |
MS.gene68029.t1 | AT2G18090 | 52.778 | 324 | 143 | 3 | 86 | 399 | 68 | 391 | 6.02e-114 | 376 |
MS.gene68029.t1 | AT2G18090 | 33.687 | 377 | 215 | 9 | 718 | 1063 | 448 | 820 | 2.10e-36 | 149 |
MS.gene68029.t1 | AT5G63700 | 27.226 | 584 | 332 | 15 | 100 | 618 | 25 | 580 | 7.74e-59 | 214 |
MS.gene68029.t1 | AT5G63700 | 27.500 | 520 | 300 | 13 | 100 | 567 | 25 | 519 | 1.02e-55 | 203 |
MS.gene68029.t1 | AT5G08430 | 31.073 | 354 | 206 | 10 | 303 | 645 | 32 | 358 | 2.80e-33 | 135 |
MS.gene68029.t1 | AT5G08430 | 30.508 | 354 | 208 | 9 | 303 | 645 | 32 | 358 | 6.23e-33 | 136 |
MS.gene68029.t1 | AT5G23480 | 24.274 | 379 | 222 | 10 | 303 | 649 | 27 | 372 | 6.36e-22 | 100 |
MS.gene68029.t1 | AT5G23480 | 24.274 | 379 | 222 | 10 | 303 | 649 | 27 | 372 | 6.36e-22 | 100 |
MS.gene68029.t1 | AT5G23480 | 24.274 | 379 | 222 | 10 | 303 | 649 | 27 | 372 | 6.36e-22 | 100 |
MS.gene68029.t1 | AT5G23480 | 24.274 | 379 | 222 | 10 | 303 | 649 | 27 | 372 | 6.36e-22 | 100 |
MS.gene68029.t1 | AT5G23480 | 24.274 | 379 | 222 | 10 | 303 | 649 | 27 | 372 | 6.36e-22 | 100 |
MS.gene68029.t1 | AT5G23480 | 23.848 | 369 | 205 | 10 | 303 | 649 | 27 | 341 | 3.63e-20 | 95.1 |
Find 279 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCCCTGCAGAAAATAATTT+TGG | 0.173795 | 5.3:-12341922 | MS.gene68029:CDS |
TTGTTAACTGATGCACTTAA+TGG | 0.202378 | 5.3:-12339485 | MS.gene68029:CDS |
CTCATACAATGAATCCAAAT+TGG | 0.204917 | 5.3:+12340047 | None:intergenic |
AGAATCACACCAACAAATTA+AGG | 0.216582 | 5.3:-12339175 | MS.gene68029:CDS |
GTTACAGTCGCCGGTGTTTC+CGG | 0.218973 | 5.3:+12344391 | None:intergenic |
CATACTCCAGCAAGAGATTC+TGG | 0.236810 | 5.3:+12342088 | None:intergenic |
GTTGCTGAACCTTACAAAAT+TGG | 0.246056 | 5.3:-12341483 | MS.gene68029:CDS |
TGGAAGAAGTATTTACATTA+TGG | 0.249164 | 5.3:+12339000 | None:intergenic |
TGTACACTCTGACCCCAATT+TGG | 0.264861 | 5.3:-12340061 | MS.gene68029:CDS |
TACCATCTTAAAGATGAAAA+AGG | 0.271358 | 5.3:-12342300 | MS.gene68029:CDS |
CTGTAGTAACTCCAAGCTTT+GGG | 0.292547 | 5.3:-12338296 | MS.gene68029:CDS |
TGAATCAGTTTCAGATCTTT+TGG | 0.293661 | 5.3:-12338832 | MS.gene68029:CDS |
ATGATCCTCCCTTAATTTGT+TGG | 0.309490 | 5.3:+12339166 | None:intergenic |
AGTAAGCATGTATTCTCAAT+TGG | 0.319348 | 5.3:+12339797 | None:intergenic |
TACATGTATAGCACATATAA+TGG | 0.327124 | 5.3:+12342765 | None:intergenic |
GATCACTTCCGTATCTTGTT+TGG | 0.332764 | 5.3:+12338268 | None:intergenic |
TTGCGTCAAAGTATAAAGTA+TGG | 0.336240 | 5.3:-12341242 | MS.gene68029:CDS |
TCTAGACTAGTAAATTTGTT+TGG | 0.338628 | 5.3:-12342012 | MS.gene68029:CDS |
GTTTCTGTTAGAGGAAATAA+AGG | 0.339229 | 5.3:-12342701 | MS.gene68029:CDS |
ACTACGTGGCAGGCTATTAT+AGG | 0.342752 | 5.3:-12338873 | MS.gene68029:CDS |
CTTCATAACCTCACTGTTCT+CGG | 0.347536 | 5.3:+12344213 | None:intergenic |
TGATAGATCATGGCATTATC+AGG | 0.347539 | 5.3:-12339630 | MS.gene68029:CDS |
CTCTGATCTGTTCTATGATT+CGG | 0.347556 | 5.3:+12339327 | None:intergenic |
CAAGACACCATCCCAAATTC+TGG | 0.350471 | 5.3:+12339865 | None:intergenic |
TAAGAGATGCACAAGTAAAA+AGG | 0.350827 | 5.3:-12341821 | MS.gene68029:CDS |
GAACAGTGCCCAGGGAAATA+AGG | 0.351756 | 5.3:-12342639 | MS.gene68029:CDS |
ATGGTGTCTTGAATGGTGTT+GGG | 0.358098 | 5.3:-12339853 | MS.gene68029:CDS |
ACCAGGAAAACCCCGATCTC+TGG | 0.361017 | 5.3:+12338233 | None:intergenic |
TCATCAATAGGAGTTTCGTT+TGG | 0.363221 | 5.3:+12339758 | None:intergenic |
AGGGAACCAGGTTTAGTTAG+AGG | 0.373757 | 5.3:-12338204 | MS.gene68029:CDS |
TCATACAATGAATCCAAATT+GGG | 0.377658 | 5.3:+12340048 | None:intergenic |
TACAGCTGCAACATAGAAAA+AGG | 0.377698 | 5.3:+12339584 | None:intergenic |
CAAAGTACCGCAATTCCATT+TGG | 0.377811 | 5.3:+12343792 | None:intergenic |
TCCCTCCAGATCTCAAAGTA+TGG | 0.380048 | 5.3:-12339538 | MS.gene68029:CDS |
ATTGAGTGCTGCTGCTCCTA+TGG | 0.380469 | 5.3:-12342343 | MS.gene68029:CDS |
ATTGCATGCTGGAGGGGAAG+GGG | 0.380816 | 5.3:+12338899 | None:intergenic |
CCGCCATTTGGTGTTGGTAA+TGG | 0.381731 | 5.3:-12338159 | MS.gene68029:CDS |
TGTTAACTGATGCACTTAAT+GGG | 0.385550 | 5.3:-12339484 | MS.gene68029:CDS |
GATCCATTCCTCCCCATTCC+AGG | 0.385876 | 5.3:+12338394 | None:intergenic |
TCCCAAATTCTGGAGAAAAT+AGG | 0.386571 | 5.3:+12339875 | None:intergenic |
CATGACTCAAACAGGACTTC+TGG | 0.386601 | 5.3:-12339110 | MS.gene68029:CDS |
TCTGTAGTAACTCCAAGCTT+TGG | 0.386688 | 5.3:-12338297 | MS.gene68029:CDS |
CATCAATAGGAGTTTCGTTT+GGG | 0.387224 | 5.3:+12339759 | None:intergenic |
GACAGTTCCGGCGACTGTTC+CGG | 0.388513 | 5.3:-12344365 | MS.gene68029:CDS |
GATGGTGTCTTGAATGGTGT+TGG | 0.389454 | 5.3:-12339854 | MS.gene68029:CDS |
ATTGCGGCTTAATAATCTTC+GGG | 0.390772 | 5.3:-12340725 | MS.gene68029:CDS |
TCTTCCTTCTTGATCTGCTT+CGG | 0.391127 | 5.3:+12344142 | None:intergenic |
TTTACAAACTCGCTGCCCTT+TGG | 0.394552 | 5.3:+12338116 | None:intergenic |
TATAGACTTGTCCAAGTTGT+AGG | 0.396375 | 5.3:-12341610 | MS.gene68029:intron |
TTACAAACTCGCTGCCCTTT+GGG | 0.401113 | 5.3:+12338117 | None:intergenic |
CATTGCATGCTGGAGGGGAA+GGG | 0.401547 | 5.3:+12338898 | None:intergenic |
TCAAGTAACCAGTGGGAGTC+AGG | 0.405251 | 5.3:-12338504 | MS.gene68029:CDS |
CCTGGTCATGGTAGGGAACC+AGG | 0.405604 | 5.3:-12338216 | MS.gene68029:CDS |
CTCATTCAAATTCTCAGAAA+AGG | 0.406617 | 5.3:+12339196 | None:intergenic |
GATAGACGAGATTTCGAATC+AGG | 0.407835 | 5.3:-12341400 | MS.gene68029:CDS |
TCATCTCCACTTATCTCTAC+AGG | 0.407890 | 5.3:-12339683 | MS.gene68029:CDS |
AAATACTTCTTCCAATTGCT+TGG | 0.413010 | 5.3:-12338991 | MS.gene68029:CDS |
CTTTAAGATGGTAAAGTTTG+TGG | 0.413487 | 5.3:+12342310 | None:intergenic |
ACGAAATGCAAACACGAGTT+GGG | 0.415413 | 5.3:-12338370 | MS.gene68029:CDS |
GGCAATCTTCGGCACAAAGC+TGG | 0.416012 | 5.3:-12339028 | MS.gene68029:CDS |
GACTGTTCCGGTTGCCGTTA+CGG | 0.416243 | 5.3:-12344353 | MS.gene68029:CDS |
AATTGCGGCTTAATAATCTT+CGG | 0.416863 | 5.3:-12340726 | MS.gene68029:CDS |
ATTCATCTTTACCATTAGAC+TGG | 0.419959 | 5.3:+12339279 | None:intergenic |
AACAGCCTATTGCTCTCTTT+AGG | 0.421297 | 5.3:-12339431 | MS.gene68029:CDS |
GCATTGCATGCTGGAGGGGA+AGG | 0.421721 | 5.3:+12338897 | None:intergenic |
GAGGCAGAGCTGCGTGGAAC+AGG | 0.422436 | 5.3:-12338185 | MS.gene68029:CDS |
GCGGTCTCCGTAACGGCAAC+CGG | 0.427210 | 5.3:+12344346 | None:intergenic |
TGATGTCCAGAATCTCTTGC+TGG | 0.429046 | 5.3:-12342094 | MS.gene68029:CDS |
TGGTGTCTTGAATGGTGTTG+GGG | 0.429149 | 5.3:-12339852 | MS.gene68029:CDS |
TTCGGCGGAGGAGCTACTTT+CGG | 0.429190 | 5.3:+12344160 | None:intergenic |
CTATGTTGCAGCTGTATAAG+TGG | 0.431594 | 5.3:-12339577 | MS.gene68029:CDS |
TTTCCAGCCACTGCAACATT+GGG | 0.434638 | 5.3:-12338462 | MS.gene68029:CDS |
TGGCTCCTAAAGAGAGCAAT+AGG | 0.435384 | 5.3:+12339426 | None:intergenic |
AAGAACATCACCACTTAAGC+TGG | 0.437573 | 5.3:-12338940 | MS.gene68029:CDS |
TGGCATTATCAGGATCCATC+TGG | 0.437750 | 5.3:-12339620 | MS.gene68029:CDS |
ATGGAAATCATGACTCAAAC+AGG | 0.438689 | 5.3:-12339118 | MS.gene68029:CDS |
TGGAACAGGCAACCGCCATT+TGG | 0.439002 | 5.3:-12338171 | MS.gene68029:CDS |
GTAAGCATGTATTCTCAATT+GGG | 0.439319 | 5.3:+12339798 | None:intergenic |
GACTGTAACGGAGACAGTTC+CGG | 0.439619 | 5.3:-12344377 | MS.gene68029:CDS |
TTATAAGAAAGTGGGGTTCA+AGG | 0.443433 | 5.3:+12341953 | None:intergenic |
GTAGACACCACTTGGAGACT+TGG | 0.445086 | 5.3:-12338432 | MS.gene68029:CDS |
AATGGAATCGCTTGGTGGCT+TGG | 0.445389 | 5.3:-12338796 | MS.gene68029:CDS |
ATCCTCCATACTTTGAGATC+TGG | 0.448703 | 5.3:+12339533 | None:intergenic |
ACTGATTCATCAAAATCATC+TGG | 0.450681 | 5.3:+12338846 | None:intergenic |
TTGGGGTCAGAGTGTACATC+TGG | 0.451024 | 5.3:+12340066 | None:intergenic |
ACATGTATAGCACATATAAT+GGG | 0.452039 | 5.3:+12342766 | None:intergenic |
GATACTTCAACCCAGTCTAA+TGG | 0.452696 | 5.3:-12339290 | MS.gene68029:CDS |
ACATCAGCACTATCATCAAT+AGG | 0.453370 | 5.3:+12339746 | None:intergenic |
CGATGTGGTATCCAAGCAAT+TGG | 0.454186 | 5.3:+12338980 | None:intergenic |
GGAAAGTACACACCTGGAAT+GGG | 0.456457 | 5.3:-12338406 | MS.gene68029:CDS |
ATGCCCAATGTTGCAGTGGC+TGG | 0.457866 | 5.3:+12338459 | None:intergenic |
TTTAAGATGGTAAAGTTTGT+GGG | 0.462817 | 5.3:+12342311 | None:intergenic |
TTGCATGCTGGAGGGGAAGG+GGG | 0.466493 | 5.3:+12338900 | None:intergenic |
CTACTTGCGGCGAAGTCTGA+TGG | 0.467567 | 5.3:-12341728 | MS.gene68029:CDS |
GTTTGCTTCATTTGCTTCGA+CGG | 0.470458 | 5.3:-12344112 | MS.gene68029:CDS |
ATACCATTTCCTTATTTCCC+TGG | 0.470501 | 5.3:+12342630 | None:intergenic |
TGGAAAGTACACACCTGGAA+TGG | 0.470741 | 5.3:-12338407 | MS.gene68029:CDS |
GATCCATCTGGGAAGGTTCA+AGG | 0.471913 | 5.3:-12339608 | MS.gene68029:CDS |
CTCAATTGGGTCACTGGCAG+TGG | 0.472098 | 5.3:+12339811 | None:intergenic |
GTTTGGCTATCCCCAAAGCT+TGG | 0.472616 | 5.3:+12338285 | None:intergenic |
AGGATTCACGAGAAGGTTGT+TGG | 0.472648 | 5.3:-12341682 | MS.gene68029:CDS |
AAATTCTCAGAAAAGGAAGT+TGG | 0.474252 | 5.3:+12339203 | None:intergenic |
CAATTAGAGATTTCTGTTGA+GGG | 0.477581 | 5.3:+12342043 | None:intergenic |
TACCATTTCCTTATTTCCCT+GGG | 0.478038 | 5.3:+12342631 | None:intergenic |
CACCACTTGGAGACTTGGAT+TGG | 0.478908 | 5.3:-12338427 | MS.gene68029:CDS |
AAGAAGCCTAAGGGACCTTC+AGG | 0.481000 | 5.3:-12342225 | MS.gene68029:CDS |
TTGAGTGCTGCTGCTCCTAT+GGG | 0.481137 | 5.3:-12342342 | MS.gene68029:CDS |
ATTAGTGATGCTGTTGCAAA+TGG | 0.481762 | 5.3:-12341892 | MS.gene68029:CDS |
CGTATAGACCTCTGCCCAAA+GGG | 0.484540 | 5.3:-12338131 | MS.gene68029:CDS |
ACTTTCGGAGTTCCTTTCGC+TGG | 0.487817 | 5.3:+12344175 | None:intergenic |
ATTTGGGATGGTGTCTTGAA+TGG | 0.488863 | 5.3:-12339860 | MS.gene68029:CDS |
TTGTGGGAAGTTTGACCCAT+AGG | 0.491185 | 5.3:+12342327 | None:intergenic |
ATGCAATGCAACTACGTGGC+AGG | 0.491186 | 5.3:-12338883 | MS.gene68029:CDS |
TGTATTCTCAATTGGGTCAC+TGG | 0.492209 | 5.3:+12339805 | None:intergenic |
CTATCGATATGACCTCCTTC+CGG | 0.492961 | 5.3:+12341418 | None:intergenic |
GTCTCGTTCTCTGCGATCGC+CGG | 0.493648 | 5.3:-12344084 | MS.gene68029:intron |
TTCTTGATCTGCTTCGGCGG+AGG | 0.494190 | 5.3:+12344148 | None:intergenic |
ACAATTAGAGATTTCTGTTG+AGG | 0.494879 | 5.3:+12342042 | None:intergenic |
GATGAATCCGTTAGGAGCAA+TGG | 0.495944 | 5.3:-12339263 | MS.gene68029:CDS |
AACGAAATGCAAACACGAGT+TGG | 0.499133 | 5.3:-12338371 | MS.gene68029:CDS |
GAATCACACCAACAAATTAA+GGG | 0.500251 | 5.3:-12339174 | MS.gene68029:CDS |
TTTAGGAGCCAATGTTGCAT+TGG | 0.503048 | 5.3:-12339414 | MS.gene68029:CDS |
ATTTCGATGACAAGAGCAGC+TGG | 0.503366 | 5.3:-12342449 | MS.gene68029:CDS |
CACGCCGGATGATACGCTTT+AGG | 0.504465 | 5.3:+12343850 | None:intergenic |
ATTTATGGAACAATCAAAGC+CGG | 0.504469 | 5.3:-12344410 | None:intergenic |
TGCCCAGGGAAATAAGGAAA+TGG | 0.504537 | 5.3:-12342633 | MS.gene68029:intron |
TAGGAGCAGCAGCACTCAAT+GGG | 0.504911 | 5.3:+12342346 | None:intergenic |
ACTCGCTGCCCTTTGGGCAG+AGG | 0.505416 | 5.3:+12338123 | None:intergenic |
CCTCCATTACCAACACCAAA+TGG | 0.507490 | 5.3:+12338156 | None:intergenic |
TTTATGAAAGTGGGTACTGT+AGG | 0.507920 | 5.3:-12338092 | MS.gene68029:CDS |
AACAAATTAAGGGAGGATCA+TGG | 0.508647 | 5.3:-12339164 | MS.gene68029:CDS |
ACAAATTAAGGGAGGATCAT+GGG | 0.508655 | 5.3:-12339163 | MS.gene68029:CDS |
CATCTCCACTTATCTCTACA+GGG | 0.508658 | 5.3:-12339682 | MS.gene68029:CDS |
TCTTCCGTTCAAAAGCCAAA+TGG | 0.509901 | 5.3:-12343807 | MS.gene68029:CDS |
GAGAGACGGCGGTTGTTGTA+CGG | 0.511402 | 5.3:-12344263 | MS.gene68029:CDS |
TTTGTCATCCAATGCAACAT+TGG | 0.511832 | 5.3:+12339406 | None:intergenic |
TTGTTTGGAAAAGCTCGTCT+TGG | 0.514641 | 5.3:-12341997 | MS.gene68029:CDS |
CCATTTGGTGTTGGTAATGG+AGG | 0.516121 | 5.3:-12338156 | MS.gene68029:CDS |
AAAGTGGGTACTGTAGGAAA+GGG | 0.516641 | 5.3:-12338086 | MS.gene68029:CDS |
TTTCCGAGCCTGACTCCCAC+TGG | 0.518669 | 5.3:+12338496 | None:intergenic |
GCTGATTGAGAACAGTGCCC+AGG | 0.522778 | 5.3:-12342648 | MS.gene68029:CDS |
AGACAACTCAGGGCAATCTT+CGG | 0.526028 | 5.3:-12339039 | MS.gene68029:CDS |
TCATTCATAAAATCATCAAA+TGG | 0.527514 | 5.3:+12339650 | None:intergenic |
TCCTTCTTGATCTGCTTCGG+CGG | 0.529690 | 5.3:+12344145 | None:intergenic |
CTCCGCCGCGGTCTCCGTAA+CGG | 0.531301 | 5.3:+12344339 | None:intergenic |
ATGACAGCGAGAACTACTTT+CGG | 0.532438 | 5.3:+12344238 | None:intergenic |
ACACCTGGAATGGGGAGGAA+TGG | 0.534911 | 5.3:-12338397 | MS.gene68029:CDS |
ATAGGAGCAGCAGCACTCAA+TGG | 0.536521 | 5.3:+12342345 | None:intergenic |
CCAGGAAAACCCCGATCTCT+GGG | 0.536704 | 5.3:+12338234 | None:intergenic |
TGTACGTATTCTTTGTGCAA+GGG | 0.539143 | 5.3:-12342746 | MS.gene68029:CDS |
ATGGTAAAGATGAATCCGTT+AGG | 0.539201 | 5.3:-12339271 | MS.gene68029:CDS |
AAATCAAATCCCAGCTTAAG+TGG | 0.540274 | 5.3:+12338930 | None:intergenic |
GAAAGTGGGTACTGTAGGAA+AGG | 0.542249 | 5.3:-12338087 | MS.gene68029:CDS |
TTTGGCAGAAGTGGAGGCAA+TGG | 0.543632 | 5.3:-12338814 | MS.gene68029:CDS |
CTCCATACTTTGAGATCTGG+AGG | 0.545239 | 5.3:+12339536 | None:intergenic |
CTTAGTCCAATGCTTGATGC+AGG | 0.546756 | 5.3:-12338696 | MS.gene68029:CDS |
TTCATCTTTACCATTAGACT+GGG | 0.547371 | 5.3:+12339280 | None:intergenic |
TGCTTCATTTGCTTCGACGG+TGG | 0.548926 | 5.3:-12344109 | MS.gene68029:CDS |
GGACCTTCAGGCGGTGACAC+GGG | 0.549683 | 5.3:-12342213 | MS.gene68029:CDS |
GTGCAAGAGATGGGCATCAA+AGG | 0.552347 | 5.3:-12342175 | MS.gene68029:CDS |
TCTGGTGGTCAGAGTAATAG+TGG | 0.552718 | 5.3:-12339092 | MS.gene68029:CDS |
GGGGATAGCCAAACAAGATA+CGG | 0.553183 | 5.3:-12338276 | MS.gene68029:CDS |
TTGACATCTGCTTGTTGTAA+CGG | 0.553275 | 5.3:+12338606 | None:intergenic |
TCATGGGTGGAAGTATTCAC+AGG | 0.553606 | 5.3:+12338059 | None:intergenic |
GACTGTTGAAGTTCCGACGA+AGG | 0.556762 | 5.3:-12344311 | MS.gene68029:CDS |
CACGTAGTTGCATTGCATGC+TGG | 0.557373 | 5.3:+12338888 | None:intergenic |
ACATCGGAAACTGCCTTCGT+CGG | 0.558062 | 5.3:+12344298 | None:intergenic |
GATGCCCATCTCTTGCACTC+AGG | 0.561219 | 5.3:+12342180 | None:intergenic |
GGCATTATCAGGATCCATCT+GGG | 0.561353 | 5.3:-12339619 | MS.gene68029:CDS |
GGTGTCTTGAATGGTGTTGG+GGG | 0.561455 | 5.3:-12339851 | MS.gene68029:CDS |
TATGAGTCTGATGAAGATGC+TGG | 0.561952 | 5.3:-12340030 | MS.gene68029:CDS |
TTTAAATTTAAACCGGAAGG+AGG | 0.562088 | 5.3:-12341430 | MS.gene68029:CDS |
ATGTACGTATTCTTTGTGCA+AGG | 0.562282 | 5.3:-12342747 | MS.gene68029:CDS |
AAGGTCACATACCTACAACT+TGG | 0.562288 | 5.3:+12341599 | None:intergenic |
GTGGAGGCAATGGAATCGCT+TGG | 0.564327 | 5.3:-12338804 | MS.gene68029:CDS |
GGGACCTTCAGGCGGTGACA+CGG | 0.565507 | 5.3:-12342214 | MS.gene68029:CDS |
CTACGTTTCATGATTGAAGT+GGG | 0.566724 | 5.3:+12338768 | None:intergenic |
GCAGTTACTAAATTCTTCAG+AGG | 0.566743 | 5.3:-12340115 | MS.gene68029:CDS |
AGTTGCATTGCATGCTGGAG+GGG | 0.567218 | 5.3:+12338893 | None:intergenic |
AAGAAAGCAGTCAGGATGGT+GGG | 0.568241 | 5.3:-12339385 | MS.gene68029:CDS |
AGGCAACCGCCATTTGGTGT+TGG | 0.569763 | 5.3:-12338165 | MS.gene68029:CDS |
TAACCAGTGGGAGTCAGGCT+CGG | 0.570435 | 5.3:-12338499 | MS.gene68029:CDS |
GGATGACAAAGAAAGCAGTC+AGG | 0.572470 | 5.3:-12339393 | MS.gene68029:CDS |
ACAATCAAAGCCGGAAACAC+CGG | 0.573399 | 5.3:-12344401 | MS.gene68029:CDS |
TCGTATAGACCTCTGCCCAA+AGG | 0.573598 | 5.3:-12338132 | MS.gene68029:CDS |
TATTGGAAGCTGAGAAATTG+CGG | 0.573970 | 5.3:-12340741 | MS.gene68029:CDS |
TGCGTCAAAGTATAAAGTAT+GGG | 0.574180 | 5.3:-12341241 | MS.gene68029:CDS |
GGAAACACCGGCGACTGTAA+CGG | 0.577284 | 5.3:-12344389 | MS.gene68029:CDS |
GCATGACTGTAGACACCACT+TGG | 0.578287 | 5.3:-12338440 | MS.gene68029:CDS |
ATTTGATTCTATATCTACAC+AGG | 0.578615 | 5.3:+12342260 | None:intergenic |
GCAATCCCTGTAGAGATAAG+TGG | 0.578905 | 5.3:+12339677 | None:intergenic |
GCTCTGCCTCTAACTAAACC+TGG | 0.580099 | 5.3:+12338198 | None:intergenic |
TAATGAAAGGATTCACGAGA+AGG | 0.581274 | 5.3:-12341689 | MS.gene68029:CDS |
ATGCCATCCATTGCTCCTAA+CGG | 0.581344 | 5.3:+12339256 | None:intergenic |
TCACCGCCTGAAGGTCCCTT+AGG | 0.581612 | 5.3:+12342219 | None:intergenic |
CTGATTGAGAACAGTGCCCA+GGG | 0.582372 | 5.3:-12342647 | MS.gene68029:CDS |
ACTACGTTTCATGATTGAAG+TGG | 0.584103 | 5.3:+12338767 | None:intergenic |
ATCTCAATCTACAGCAGCAG+AGG | 0.584635 | 5.3:-12338631 | MS.gene68029:CDS |
GCAAACACGAGTTGGGGAGT+AGG | 0.584654 | 5.3:-12338363 | MS.gene68029:CDS |
CTTTGCCTGAGTGCAAGAGA+TGG | 0.584656 | 5.3:-12342185 | MS.gene68029:CDS |
TTGTCCTAAAGCGTATCATC+CGG | 0.585341 | 5.3:-12343854 | MS.gene68029:CDS |
ACGGCAACCGGAACAGTCGC+CGG | 0.585731 | 5.3:+12344358 | None:intergenic |
AGAGGAAATAAAGGTTTGTG+TGG | 0.585800 | 5.3:-12342692 | MS.gene68029:CDS |
GGTCCTTGAACCTTCCCAGA+TGG | 0.590343 | 5.3:+12339605 | None:intergenic |
ACATTAACTTGATCTACTTG+CGG | 0.590461 | 5.3:-12341741 | MS.gene68029:CDS |
GTCTGACTGATGATAATGAA+AGG | 0.590801 | 5.3:-12341702 | MS.gene68029:CDS |
ACTGTCTCCGTTACAGTCGC+CGG | 0.592957 | 5.3:+12344382 | None:intergenic |
AATAGGCTGTTGTTCCGCAA+TGG | 0.597034 | 5.3:+12339443 | None:intergenic |
CCTGGTTCCCTACCATGACC+AGG | 0.598011 | 5.3:+12338216 | None:intergenic |
CAGATAGTGAAGACAACTCA+GGG | 0.598737 | 5.3:-12339049 | MS.gene68029:CDS |
GTACGTATTCTTTGTGCAAG+GGG | 0.599465 | 5.3:-12342745 | MS.gene68029:CDS |
AGAAGTGTCTAGTGTTGCAG+TGG | 0.601945 | 5.3:-12339711 | MS.gene68029:CDS |
CTCAGAAACATGAGCCGATG+TGG | 0.603967 | 5.3:+12338965 | None:intergenic |
TTTGCCTGAGTGCAAGAGAT+GGG | 0.605036 | 5.3:-12342184 | MS.gene68029:CDS |
CTGTATAAGTGGAATGCAAG+TGG | 0.605595 | 5.3:-12339566 | MS.gene68029:CDS |
TAGTTGCATTGCATGCTGGA+GGG | 0.605974 | 5.3:+12338892 | None:intergenic |
GACAAAGAAAGCAGTCAGGA+TGG | 0.607040 | 5.3:-12339389 | MS.gene68029:CDS |
TGGATTGGAAAGTACACACC+TGG | 0.609215 | 5.3:-12338412 | MS.gene68029:CDS |
GAGGCAATGGAATCGCTTGG+TGG | 0.610924 | 5.3:-12338801 | MS.gene68029:CDS |
TGTAGTAACTCCAAGCTTTG+GGG | 0.611671 | 5.3:-12338295 | MS.gene68029:CDS |
TAGAAGTGTGTACATGTGAC+TGG | 0.616630 | 5.3:+12339231 | None:intergenic |
GTCAACTTTAGAATTTCTCG+AGG | 0.616845 | 5.3:+12338551 | None:intergenic |
AAAGAAAGCAGTCAGGATGG+TGG | 0.617264 | 5.3:-12339386 | MS.gene68029:CDS |
CGAAATGCAAACACGAGTTG+GGG | 0.617307 | 5.3:-12338369 | MS.gene68029:CDS |
TCAGATAGTGAAGACAACTC+AGG | 0.618147 | 5.3:-12339050 | MS.gene68029:CDS |
CAATTGCTTGGATACCACAT+CGG | 0.619651 | 5.3:-12338979 | MS.gene68029:CDS |
AAGCGCGGTCGTCCAGCGAA+AGG | 0.620518 | 5.3:-12344187 | MS.gene68029:CDS |
CGTAGTGAGGAATTGACTGA+TGG | 0.621062 | 5.3:-12338750 | MS.gene68029:CDS |
AGAACATCACCACTTAAGCT+GGG | 0.624830 | 5.3:-12338939 | MS.gene68029:CDS |
GACTCAAACAGGACTTCTGG+TGG | 0.627249 | 5.3:-12339107 | MS.gene68029:CDS |
GAGAAATTCTAAAGTTGACG+TGG | 0.629269 | 5.3:-12338547 | MS.gene68029:CDS |
GTGAACATGACGGAGAGAGA+CGG | 0.631033 | 5.3:-12344277 | MS.gene68029:CDS |
AACAGTCTTCGTCTCCGCCG+CGG | 0.631437 | 5.3:+12344327 | None:intergenic |
CTCCAGATCTCAAAGTATGG+AGG | 0.636299 | 5.3:-12339535 | MS.gene68029:CDS |
TTATCAGGATCCATCTGGGA+AGG | 0.637004 | 5.3:-12339615 | MS.gene68029:CDS |
TTTCGATGACAAGAGCAGCT+GGG | 0.637251 | 5.3:-12342448 | MS.gene68029:CDS |
AGAAATTCTAAAGTTGACGT+GGG | 0.639228 | 5.3:-12338546 | MS.gene68029:CDS |
ATGGGATCCAAAATCATGGG+TGG | 0.640005 | 5.3:+12338046 | None:intergenic |
TCCGCCGAAGCAGATCAAGA+AGG | 0.640783 | 5.3:-12344146 | MS.gene68029:CDS |
GTAGTTGCATTGCATGCTGG+AGG | 0.641336 | 5.3:+12338891 | None:intergenic |
TCAAAAGCCAAATGGAATTG+CGG | 0.644100 | 5.3:-12343799 | MS.gene68029:intron |
TTCAATCATGAAACGTAGTG+AGG | 0.644665 | 5.3:-12338763 | MS.gene68029:CDS |
ACACCCGTGTCACCGCCTGA+AGG | 0.645434 | 5.3:+12342210 | None:intergenic |
TTGCACGCTTAAAGAATGCG+TGG | 0.645466 | 5.3:-12340145 | MS.gene68029:intron |
TCATCATCAAAGAATATCAG+AGG | 0.650447 | 5.3:-12338580 | MS.gene68029:CDS |
ATGTGTTTCAAGTAACCAGT+GGG | 0.650974 | 5.3:-12338511 | MS.gene68029:CDS |
GAGTCAGATGGCAATAAACA+AGG | 0.652111 | 5.3:-12340006 | MS.gene68029:intron |
TCCATACTTTGAGATCTGGA+GGG | 0.653191 | 5.3:+12339537 | None:intergenic |
TAGTAACTGTAAATCACATG+TGG | 0.653829 | 5.3:+12338653 | None:intergenic |
AATCCGTTAGGAGCAATGGA+TGG | 0.654526 | 5.3:-12339259 | MS.gene68029:CDS |
TAGTTAGAGGCAGAGCTGCG+TGG | 0.657531 | 5.3:-12338191 | MS.gene68029:CDS |
GAAGATGCTGGAGAGTCAGA+TGG | 0.658657 | 5.3:-12340018 | MS.gene68029:CDS |
GAAAGTACACACCTGGAATG+GGG | 0.660607 | 5.3:-12338405 | MS.gene68029:CDS |
GTGCGGATAAGAATCTCTAG+TGG | 0.660680 | 5.3:-12341652 | MS.gene68029:CDS |
TAATTGTGCAGGTACAAGCA+AGG | 0.661666 | 5.3:-12341505 | MS.gene68029:intron |
TCGTCTCGCTTGACACACGC+CGG | 0.666888 | 5.3:+12343835 | None:intergenic |
TTCCAATCCAAGTCTCCAAG+TGG | 0.667946 | 5.3:+12338425 | None:intergenic |
TGATGCTGTTGCAAATGGAA+AGG | 0.670038 | 5.3:-12341887 | MS.gene68029:CDS |
AAGCCTAAGGGACCTTCAGG+CGG | 0.671021 | 5.3:-12342222 | MS.gene68029:CDS |
TGCTGTTGCAAATGGAAAGG+AGG | 0.671749 | 5.3:-12341884 | MS.gene68029:CDS |
CATACAATGAATCCAAATTG+GGG | 0.672918 | 5.3:+12340049 | None:intergenic |
AGTCATGCCCAATGTTGCAG+TGG | 0.673187 | 5.3:+12338455 | None:intergenic |
TATGTGTTTCAAGTAACCAG+TGG | 0.677699 | 5.3:-12338512 | MS.gene68029:CDS |
GCTTTCAAAGAGATTGACTG+TGG | 0.679086 | 5.3:-12341219 | MS.gene68029:intron |
TGCCGTTACGGAGACCGCGG+CGG | 0.679201 | 5.3:-12344341 | MS.gene68029:CDS |
GGTTGCCGTTACGGAGACCG+CGG | 0.679647 | 5.3:-12344344 | MS.gene68029:CDS |
AGTTTCCGATGTGAACATGA+CGG | 0.681488 | 5.3:-12344287 | MS.gene68029:CDS |
TCTCTCCGTCATGTTCACAT+CGG | 0.681784 | 5.3:+12344282 | None:intergenic |
AAGTGGGTACTGTAGGAAAG+GGG | 0.681811 | 5.3:-12338085 | MS.gene68029:CDS |
TCACACCAACAAATTAAGGG+AGG | 0.689313 | 5.3:-12339171 | MS.gene68029:CDS |
AAAGCAGTCAGGATGGTGGG+AGG | 0.690722 | 5.3:-12339382 | MS.gene68029:CDS |
AGTACACACCTGGAATGGGG+AGG | 0.705466 | 5.3:-12338402 | MS.gene68029:CDS |
CAGCATGCAATGCAACTACG+TGG | 0.709858 | 5.3:-12338887 | MS.gene68029:CDS |
CCATTACCAACACCAAATGG+CGG | 0.710852 | 5.3:+12338159 | None:intergenic |
TTCGAATCAGGAGTTCTCCG+AGG | 0.712977 | 5.3:-12341388 | MS.gene68029:intron |
GAGTTGGGGAGTAGGACATG+CGG | 0.719528 | 5.3:-12338355 | MS.gene68029:CDS |
AACATGACGGAGAGAGACGG+CGG | 0.721172 | 5.3:-12344274 | MS.gene68029:CDS |
GAGGTTATGAAGAAGAAGCG+CGG | 0.742865 | 5.3:-12344202 | MS.gene68029:CDS |
TGTCATCGCCGAGAACAGTG+AGG | 0.750277 | 5.3:-12344221 | MS.gene68029:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGAAATTTTAAATTTAAAC+CGG | - | chr5.3:12341028-12341047 | MS.gene68029:intron | 10.0% |
!! | AAACTTTATGTTTCATTTAT+TGG | + | chr5.3:12341909-12341928 | None:intergenic | 15.0% |
!! | ATGTATATTCAAACATAATT+TGG | - | chr5.3:12339249-12339268 | MS.gene68029:CDS | 15.0% |
!!! | ATTTTCTTTTATAAGAAAGT+GGG | + | chr5.3:12340523-12340542 | None:intergenic | 15.0% |
!!! | CAATTTTTTAACAAAGAATT+AGG | - | chr5.3:12342180-12342199 | MS.gene68029:CDS | 15.0% |
!!! | TATTTTCTTTTATAAGAAAG+TGG | + | chr5.3:12340524-12340543 | None:intergenic | 15.0% |
!!! | TTTGAATATACATGATTTTT+AGG | + | chr5.3:12339242-12339261 | None:intergenic | 15.0% |
!!! | TTTGTAAATTTTATGAAAGT+GGG | - | chr5.3:12344364-12344383 | MS.gene68029:CDS | 15.0% |
!! | AATAACTACATCAATAAAAG+AGG | + | chr5.3:12341708-12341727 | None:intergenic | 20.0% |
!! | AGTAATTATTTACATGCAAT+TGG | - | chr5.3:12338752-12338771 | MS.gene68029:CDS | 20.0% |
!! | ATATTTAGGAAAGAAGTAAA+TGG | + | chr5.3:12341807-12341826 | None:intergenic | 20.0% |
!! | ATTAAACCTAAAGAACAAAA+CGG | + | chr5.3:12338712-12338731 | None:intergenic | 20.0% |
!! | ATTAAGCAGAAATAAATTAG+AGG | + | chr5.3:12342124-12342143 | None:intergenic | 20.0% |
!! | CATATACATAATCATAGTTA+CGG | + | chr5.3:12342556-12342575 | None:intergenic | 20.0% |
!! | GTTATTCATTAATCATCTAT+TGG | - | chr5.3:12339369-12339388 | MS.gene68029:CDS | 20.0% |
!! | TCATTCATAAAATCATCAAA+TGG | + | chr5.3:12342818-12342837 | None:intergenic | 20.0% |
!! | TTATAGATTCTATCTTAGAT+TGG | - | chr5.3:12338480-12338499 | MS.gene68029:CDS | 20.0% |
!!! | AATTTTAAATTTAAACCGGA+AGG | - | chr5.3:12341032-12341051 | MS.gene68029:intron | 20.0% |
!!! | AGAATGGAATAATTTTGAAT+TGG | - | chr5.3:12338425-12338444 | MS.gene68029:CDS | 20.0% |
!!! | ATATGGTTAAATTAGTTTTG+TGG | - | chr5.3:12339063-12339082 | MS.gene68029:CDS | 20.0% |
!!! | ATTTTATGAATGATAGATCA+TGG | - | chr5.3:12342825-12342844 | MS.gene68029:intron | 20.0% |
!!! | ATTTTATTTGTGATATTGCT+TGG | - | chr5.3:12338775-12338794 | MS.gene68029:CDS | 20.0% |
!!! | ATTTTGTATGAGGTTTATAA+TGG | - | chr5.3:12341309-12341328 | MS.gene68029:intron | 20.0% |
!!! | ATTTTGTGTATAATAATGAC+CGG | - | chr5.3:12339033-12339052 | MS.gene68029:CDS | 20.0% |
!!! | GCAAGAAATAAATTTTAACA+TGG | - | chr5.3:12342210-12342229 | MS.gene68029:CDS | 20.0% |
!!! | GTCTATTTTTGAAAAAATTG+TGG | - | chr5.3:12339283-12339302 | MS.gene68029:CDS | 20.0% |
!!! | GTTTGTAAATTTTATGAAAG+TGG | - | chr5.3:12344363-12344382 | MS.gene68029:CDS | 20.0% |
!!! | TCTTTTATTGATGTAGTTAT+TGG | - | chr5.3:12341707-12341726 | MS.gene68029:CDS | 20.0% |
!!! | TTTTCTTTTATAAGAAAGTG+GGG | + | chr5.3:12340522-12340541 | None:intergenic | 20.0% |
! | AAACATACACTTGAAAATCA+TGG | + | chr5.3:12339171-12339190 | None:intergenic | 25.0% |
! | AAAGAATAACCAACAAAAAG+GGG | + | chr5.3:12342035-12342054 | None:intergenic | 25.0% |
! | AAATCGTTGTTAATTGTGTT+TGG | + | chr5.3:12339135-12339154 | None:intergenic | 25.0% |
! | AAGTAATTTCCTATTTACCT+CGG | + | chr5.3:12341097-12341116 | None:intergenic | 25.0% |
! | AATATATTTATCCTATGTCC+AGG | - | chr5.3:12341186-12341205 | MS.gene68029:intron | 25.0% |
! | AATGAATGAATAAGCAGAAA+AGG | + | chr5.3:12342289-12342308 | None:intergenic | 25.0% |
! | ACAAAATATAGCATACTTCA+TGG | + | chr5.3:12341296-12341315 | None:intergenic | 25.0% |
! | ACATGTATAGCACATATAAT+GGG | + | chr5.3:12339702-12339721 | None:intergenic | 25.0% |
! | AGAAAGAATAACCAACAAAA+AGG | + | chr5.3:12342037-12342056 | None:intergenic | 25.0% |
! | AGCATGGCATTAAATTATTT+AGG | + | chr5.3:12341527-12341546 | None:intergenic | 25.0% |
! | ATGGTCACTTAAATCTAAAA+AGG | - | chr5.3:12339086-12339105 | MS.gene68029:CDS | 25.0% |
! | ATTTGATTCTATATCTACAC+AGG | + | chr5.3:12340208-12340227 | None:intergenic | 25.0% |
! | CATTTAATAACTAATGTACC+TGG | - | chr5.3:12338959-12338978 | MS.gene68029:CDS | 25.0% |
! | GAAAGAATAACCAACAAAAA+GGG | + | chr5.3:12342036-12342055 | None:intergenic | 25.0% |
! | GCAAAAAGAAAGTCTATTAA+AGG | + | chr5.3:12339637-12339656 | None:intergenic | 25.0% |
! | GTGATAGATTTCTCAAAATA+AGG | + | chr5.3:12339557-12339576 | None:intergenic | 25.0% |
! | GTTAACACAATTCAAATATG+TGG | + | chr5.3:12339405-12339424 | None:intergenic | 25.0% |
! | TAAGTAACATTTCAAAAGCA+TGG | + | chr5.3:12341543-12341562 | None:intergenic | 25.0% |
! | TACATGTATAGCACATATAA+TGG | + | chr5.3:12339703-12339722 | None:intergenic | 25.0% |
! | TACCATCTTAAAGATGAAAA+AGG | - | chr5.3:12340165-12340184 | MS.gene68029:intron | 25.0% |
! | TATGATTATGTATATGCAGA+TGG | - | chr5.3:12342560-12342579 | MS.gene68029:intron | 25.0% |
! | TATTAAATGAATCTGCAAAG+TGG | + | chr5.3:12338948-12338967 | None:intergenic | 25.0% |
! | TCATACAATGAATCCAAATT+GGG | + | chr5.3:12342420-12342439 | None:intergenic | 25.0% |
! | TCGTTTAGTAATCTGATTTA+CGG | - | chr5.3:12341423-12341442 | MS.gene68029:CDS | 25.0% |
! | TTCCACCAAAAAAAAAAAAG+AGG | + | chr5.3:12341675-12341694 | None:intergenic | 25.0% |
! | TTTGTCTCACATATGAAAAA+TGG | - | chr5.3:12340324-12340343 | MS.gene68029:intron | 25.0% |
!! | AGTATGCTATATTTTGTATG+AGG | - | chr5.3:12341299-12341318 | MS.gene68029:intron | 25.0% |
!! | GAAAAAAACTCTGAAGATAA+TGG | - | chr5.3:12343328-12343347 | MS.gene68029:intron | 25.0% |
!! | TCTAGACTAGTAAATTTGTT+TGG | - | chr5.3:12340453-12340472 | MS.gene68029:intron | 25.0% |
!! | TTGGTGGATAATTAATTAGT+TGG | + | chr5.3:12339116-12339135 | None:intergenic | 25.0% |
!! | TTTAAGATGGTAAAGTTTGT+GGG | + | chr5.3:12340157-12340176 | None:intergenic | 25.0% |
!!! | AACCTTTTTCATCTTTAAGA+TGG | + | chr5.3:12340170-12340189 | None:intergenic | 25.0% |
!!! | GAATGCCTCTTTTTTTTTTT+TGG | - | chr5.3:12341667-12341686 | MS.gene68029:CDS | 25.0% |
!!! | TATGCATCTTGATTATTTTG+TGG | + | chr5.3:12340684-12340703 | None:intergenic | 25.0% |
!!! | TGGAAGAAGTATTTACATTA+TGG | + | chr5.3:12343468-12343487 | None:intergenic | 25.0% |
AAACTTGAAAACAAACTCAG+TGG | + | chr5.3:12342500-12342519 | None:intergenic | 30.0% | |
AAATAAATTAGAGGACAGCA+CGG | + | chr5.3:12342115-12342134 | None:intergenic | 30.0% | |
AAATACTTCTTCCAATTGCT+TGG | - | chr5.3:12343474-12343493 | MS.gene68029:intron | 30.0% | |
AAATTCTCAGAAAAGGAAGT+TGG | + | chr5.3:12343265-12343284 | None:intergenic | 30.0% | |
AAGAATAACCAACAAAAAGG+GGG | + | chr5.3:12342034-12342053 | None:intergenic | 30.0% | |
AATTCAATTCAGATGGCATT+TGG | + | chr5.3:12341573-12341592 | None:intergenic | 30.0% | |
AATTGCGGCTTAATAATCTT+CGG | - | chr5.3:12341739-12341758 | MS.gene68029:CDS | 30.0% | |
ACAATTAGAGATTTCTGTTG+AGG | + | chr5.3:12340426-12340445 | None:intergenic | 30.0% | |
AGAATCACACCAACAAATTA+AGG | - | chr5.3:12343290-12343309 | MS.gene68029:intron | 30.0% | |
AGGAAAGAAGTAAATGGTAA+AGG | + | chr5.3:12341801-12341820 | None:intergenic | 30.0% | |
AGTAAGCATGTATTCTCAAT+TGG | + | chr5.3:12342671-12342690 | None:intergenic | 30.0% | |
ATTCATCTTTACCATTAGAC+TGG | + | chr5.3:12343189-12343208 | None:intergenic | 30.0% | |
CAATGTGTAAAAATTCACTG+AGG | + | chr5.3:12340907-12340926 | None:intergenic | 30.0% | |
CAATTAGAGATTTCTGTTGA+GGG | + | chr5.3:12340425-12340444 | None:intergenic | 30.0% | |
CACTTGAAAATCATGGTTAA+TGG | + | chr5.3:12339164-12339183 | None:intergenic | 30.0% | |
CATACAATGAATCCAAATTG+GGG | + | chr5.3:12342419-12342438 | None:intergenic | 30.0% | |
CTAATCGGCAAATTAACAAA+TGG | + | chr5.3:12339522-12339541 | None:intergenic | 30.0% | |
CTCATACAATGAATCCAAAT+TGG | + | chr5.3:12342421-12342440 | None:intergenic | 30.0% | |
CTCATTCAAATTCTCAGAAA+AGG | + | chr5.3:12343272-12343291 | None:intergenic | 30.0% | |
CTTAAAGATGAAAAAGGTTC+TGG | - | chr5.3:12340171-12340190 | MS.gene68029:intron | 30.0% | |
GAATCACACCAACAAATTAA+GGG | - | chr5.3:12343291-12343310 | MS.gene68029:intron | 30.0% | |
GCAAATGAAATGATACATGA+TGG | - | chr5.3:12339951-12339970 | MS.gene68029:intron | 30.0% | |
GGCATTAAATTATTTAGGCA+TGG | + | chr5.3:12341522-12341541 | None:intergenic | 30.0% | |
GTAAGCATGTATTCTCAATT+GGG | + | chr5.3:12342670-12342689 | None:intergenic | 30.0% | |
GTTTCTGTTAGAGGAAATAA+AGG | - | chr5.3:12339764-12339783 | MS.gene68029:CDS | 30.0% | |
TAAGAGATGCACAAGTAAAA+AGG | - | chr5.3:12340644-12340663 | MS.gene68029:intron | 30.0% | |
TAGTAACTGTAAATCACATG+TGG | + | chr5.3:12343815-12343834 | None:intergenic | 30.0% | |
TCATCATCAAAGAATATCAG+AGG | - | chr5.3:12343885-12343904 | MS.gene68029:intron | 30.0% | |
TCCTAAATATGCTAAACTGT+GGG | - | chr5.3:12341817-12341836 | MS.gene68029:CDS | 30.0% | |
TCTCACAAATTCAATTCAGA+TGG | + | chr5.3:12341580-12341599 | None:intergenic | 30.0% | |
TCTGATATGTATTATAGACC+AGG | + | chr5.3:12338980-12338999 | None:intergenic | 30.0% | |
TGCGTCAAAGTATAAAGTAT+GGG | - | chr5.3:12341224-12341243 | MS.gene68029:CDS | 30.0% | |
TGTTAACTGATGCACTTAAT+GGG | - | chr5.3:12342981-12343000 | MS.gene68029:intron | 30.0% | |
TGTTTGTAATAGTGACACAA+GGG | + | chr5.3:12338920-12338939 | None:intergenic | 30.0% | |
TTCATCTTTACCATTAGACT+GGG | + | chr5.3:12343188-12343207 | None:intergenic | 30.0% | |
TTCCTAAATATGCTAAACTG+TGG | - | chr5.3:12341816-12341835 | MS.gene68029:CDS | 30.0% | |
TTGAAAAACAAGAAGCCTAA+GGG | - | chr5.3:12340231-12340250 | MS.gene68029:intron | 30.0% | |
TTGCGTCAAAGTATAAAGTA+TGG | - | chr5.3:12341223-12341242 | MS.gene68029:CDS | 30.0% | |
TTGTTAACTGATGCACTTAA+TGG | - | chr5.3:12342980-12342999 | MS.gene68029:intron | 30.0% | |
TTGTTTGTAATAGTGACACA+AGG | + | chr5.3:12338921-12338940 | None:intergenic | 30.0% | |
TTTAAATTTAAACCGGAAGG+AGG | - | chr5.3:12341035-12341054 | MS.gene68029:intron | 30.0% | |
TTTGAAAAACAAGAAGCCTA+AGG | - | chr5.3:12340230-12340249 | MS.gene68029:intron | 30.0% | |
! | ACATTAACTTGATCTACTTG+CGG | - | chr5.3:12340724-12340743 | MS.gene68029:CDS | 30.0% |
! | ACCTATTTTCTCCAGAATTT+GGG | - | chr5.3:12342589-12342608 | MS.gene68029:intron | 30.0% |
! | ACTGATTCATCAAAATCATC+TGG | + | chr5.3:12343622-12343641 | None:intergenic | 30.0% |
! | CAAGTCTTCATATTTTGTAG+AGG | - | chr5.3:12341128-12341147 | MS.gene68029:intron | 30.0% |
! | CTCCAAAATTATTTTCTGCA+GGG | + | chr5.3:12340548-12340567 | None:intergenic | 30.0% |
! | GCTAATGATGTTTAAAGTTG+TGG | - | chr5.3:12339305-12339324 | MS.gene68029:CDS | 30.0% |
! | TACCTATTTTCTCCAGAATT+TGG | - | chr5.3:12342588-12342607 | MS.gene68029:intron | 30.0% |
! | TCCAAAATTATTTTCTGCAG+GGG | + | chr5.3:12340547-12340566 | None:intergenic | 30.0% |
! | TCTCTCTCTTTTCATTTCTA+GGG | - | chr5.3:12338587-12338606 | MS.gene68029:CDS | 30.0% |
! | TGAATCAGTTTCAGATCTTT+TGG | - | chr5.3:12343633-12343652 | MS.gene68029:intron | 30.0% |
! | TTCTCTCTCTTTTCATTTCT+AGG | - | chr5.3:12338586-12338605 | MS.gene68029:CDS | 30.0% |
!! | AGAAATTCTAAAGTTGACGT+GGG | - | chr5.3:12343919-12343938 | MS.gene68029:intron | 30.0% |
!! | AGTATCTTTTCAAGGTGTAT+TGG | - | chr5.3:12340040-12340059 | MS.gene68029:CDS | 30.0% |
!! | CTTAAACCGTTTTGTTCTTT+AGG | - | chr5.3:12338703-12338722 | MS.gene68029:CDS | 30.0% |
!! | CTTTAAGATGGTAAAGTTTG+TGG | + | chr5.3:12340158-12340177 | None:intergenic | 30.0% |
!! | TATTTTTACCCCCTTTTTGT+TGG | - | chr5.3:12342023-12342042 | MS.gene68029:CDS | 30.0% |
!! | TCACGTCTTGAAATTAGTTT+TGG | - | chr5.3:12340933-12340952 | MS.gene68029:intron | 30.0% |
!!! | AATTCCATTTGGCTTTTGAA+CGG | + | chr5.3:12338665-12338684 | None:intergenic | 30.0% |
!!! | GGTTAAATTAGTTTTGTGGA+TGG | - | chr5.3:12339067-12339086 | MS.gene68029:CDS | 30.0% |
!!! | TGCCTCTTTTTTTTTTTTGG+TGG | - | chr5.3:12341670-12341689 | MS.gene68029:CDS | 30.0% |
AAATCAAATCCCAGCTTAAG+TGG | + | chr5.3:12343538-12343557 | None:intergenic | 35.0% | |
AACAAATTAAGGGAGGATCA+TGG | - | chr5.3:12343301-12343320 | MS.gene68029:intron | 35.0% | |
AAGTTGTGGTTAATTGTGCT+TGG | - | chr5.3:12339319-12339338 | MS.gene68029:CDS | 35.0% | |
ACAAATTAAGGGAGGATCAT+GGG | - | chr5.3:12343302-12343321 | MS.gene68029:intron | 35.0% | |
ACAGATCAGAGAACAAAAAG+TGG | - | chr5.3:12343150-12343169 | MS.gene68029:intron | 35.0% | |
ACATCAGCACTATCATCAAT+AGG | + | chr5.3:12342722-12342741 | None:intergenic | 35.0% | |
ACCCACAGTTTAGCATATTT+AGG | + | chr5.3:12341821-12341840 | None:intergenic | 35.0% | |
ACTACGTTTCATGATTGAAG+TGG | + | chr5.3:12343701-12343720 | None:intergenic | 35.0% | |
AGAGGAAATAAAGGTTTGTG+TGG | - | chr5.3:12339773-12339792 | MS.gene68029:CDS | 35.0% | |
ATGGAAATCATGACTCAAAC+AGG | - | chr5.3:12343347-12343366 | MS.gene68029:intron | 35.0% | |
ATGGTAAAGATGAATCCGTT+AGG | - | chr5.3:12343194-12343213 | MS.gene68029:intron | 35.0% | |
ATGTACGTATTCTTTGTGCA+AGG | - | chr5.3:12339718-12339737 | MS.gene68029:CDS | 35.0% | |
ATTAGTGATGCTGTTGCAAA+TGG | - | chr5.3:12340573-12340592 | MS.gene68029:intron | 35.0% | |
ATTGCGGCTTAATAATCTTC+GGG | - | chr5.3:12341740-12341759 | MS.gene68029:CDS | 35.0% | |
CATCAATAGGAGTTTCGTTT+GGG | + | chr5.3:12342709-12342728 | None:intergenic | 35.0% | |
CATTCTTTAAGCGTGCAATT+TGG | + | chr5.3:12342318-12342337 | None:intergenic | 35.0% | |
CTACGTTTCATGATTGAAGT+GGG | + | chr5.3:12343700-12343719 | None:intergenic | 35.0% | |
CTATCATAGGAAAACTGTGT+AGG | - | chr5.3:12341972-12341991 | MS.gene68029:CDS | 35.0% | |
CTCTGATCTGTTCTATGATT+CGG | + | chr5.3:12343141-12343160 | None:intergenic | 35.0% | |
GGATATGTTCAGCAATAAGT+GGG | - | chr5.3:12342231-12342250 | MS.gene68029:CDS | 35.0% | |
GGTTAATTGTGCTTGGTAAA+TGG | - | chr5.3:12339326-12339345 | MS.gene68029:CDS | 35.0% | |
GTTGCTGAACCTTACAAAAT+TGG | - | chr5.3:12340982-12341001 | MS.gene68029:intron | 35.0% | |
TAAAGGAAAGCTGCACAATT+TGG | + | chr5.3:12339620-12339639 | None:intergenic | 35.0% | |
TAATGAAAGGATTCACGAGA+AGG | - | chr5.3:12340776-12340795 | MS.gene68029:intron | 35.0% | |
TACAGCTGCAACATAGAAAA+AGG | + | chr5.3:12342884-12342903 | None:intergenic | 35.0% | |
TATAGACTTGTCCAAGTTGT+AGG | - | chr5.3:12340855-12340874 | MS.gene68029:intron | 35.0% | |
TATTGGAAGCTGAGAAATTG+CGG | - | chr5.3:12341724-12341743 | MS.gene68029:CDS | 35.0% | |
TCAAAAGCCAAATGGAATTG+CGG | - | chr5.3:12338666-12338685 | MS.gene68029:CDS | 35.0% | |
TCATCAATAGGAGTTTCGTT+TGG | + | chr5.3:12342710-12342729 | None:intergenic | 35.0% | |
TCGTTGTTAATTGTGTTTGG+TGG | + | chr5.3:12339132-12339151 | None:intergenic | 35.0% | |
TGATAGATCATGGCATTATC+AGG | - | chr5.3:12342835-12342854 | MS.gene68029:intron | 35.0% | |
TGGATATGTTCAGCAATAAG+TGG | - | chr5.3:12342230-12342249 | MS.gene68029:CDS | 35.0% | |
TGTACGTATTCTTTGTGCAA+GGG | - | chr5.3:12339719-12339738 | MS.gene68029:CDS | 35.0% | |
TGTGTATAATAATGACCGGA+GGG | - | chr5.3:12339037-12339056 | MS.gene68029:CDS | 35.0% | |
TTATAAGAAAGTGGGGTTCA+AGG | + | chr5.3:12340515-12340534 | None:intergenic | 35.0% | |
TTCAATCATGAAACGTAGTG+AGG | - | chr5.3:12343702-12343721 | MS.gene68029:intron | 35.0% | |
TTGTGTATAATAATGACCGG+AGG | - | chr5.3:12339036-12339055 | MS.gene68029:CDS | 35.0% | |
TTTGTCATCCAATGCAACAT+TGG | + | chr5.3:12343062-12343081 | None:intergenic | 35.0% | |
! | AATGGCTGTCTTTGTTTGTA+GGG | - | chr5.3:12341327-12341346 | MS.gene68029:intron | 35.0% |
! | ACCCCTGCAGAAAATAATTT+TGG | - | chr5.3:12340543-12340562 | MS.gene68029:intron | 35.0% |
! | ATACCATTTCCTTATTTCCC+TGG | + | chr5.3:12339838-12339857 | None:intergenic | 35.0% |
! | ATGTGTTTCAAGTAACCAGT+GGG | - | chr5.3:12343954-12343973 | MS.gene68029:intron | 35.0% |
! | ATTCACTGAGGTATTAGATG+TGG | + | chr5.3:12340895-12340914 | None:intergenic | 35.0% |
! | ATTTTCTCCAGAATTTGGGA+TGG | - | chr5.3:12342593-12342612 | MS.gene68029:intron | 35.0% |
! | CAAGGGGTGTATAAAAAATG+CGG | - | chr5.3:12339736-12339755 | MS.gene68029:CDS | 35.0% |
! | GAGGTATTAGATGTGGTAAA+AGG | + | chr5.3:12340888-12340907 | None:intergenic | 35.0% |
! | GCTCCAAAATTATTTTCTGC+AGG | + | chr5.3:12340549-12340568 | None:intergenic | 35.0% |
! | GTCTGACTGATGATAATGAA+AGG | - | chr5.3:12340763-12340782 | MS.gene68029:intron | 35.0% |
! | GTTCTTGTGCCAATTTTGTA+AGG | + | chr5.3:12340994-12341013 | None:intergenic | 35.0% |
! | TAATGGCTGTCTTTGTTTGT+AGG | - | chr5.3:12341326-12341345 | MS.gene68029:intron | 35.0% |
! | TACCATTTCCTTATTTCCCT+GGG | + | chr5.3:12339837-12339856 | None:intergenic | 35.0% |
! | TATGTGTTTCAAGTAACCAG+TGG | - | chr5.3:12343953-12343972 | MS.gene68029:intron | 35.0% |
! | TCCCAAATTCTGGAGAAAAT+AGG | + | chr5.3:12342593-12342612 | None:intergenic | 35.0% |
! | TTTATGAAAGTGGGTACTGT+AGG | - | chr5.3:12344373-12344392 | MS.gene68029:CDS | 35.0% |
!! | ATGATCCTCCCTTAATTTGT+TGG | + | chr5.3:12343302-12343321 | None:intergenic | 35.0% |
!! | CTCTCTCTTTTCATTTCTAG+GGG | - | chr5.3:12338588-12338607 | MS.gene68029:CDS | 35.0% |
!! | GAGAAATTCTAAAGTTGACG+TGG | - | chr5.3:12343918-12343937 | MS.gene68029:intron | 35.0% |
!! | GGGTACTGAATAATGCATAT+TGG | - | chr5.3:12341837-12341856 | MS.gene68029:CDS | 35.0% |
!! | GTCAACTTTAGAATTTCTCG+AGG | + | chr5.3:12343917-12343936 | None:intergenic | 35.0% |
!! | GTTTTGGTAACTAATTGTGC+AGG | - | chr5.3:12340949-12340968 | MS.gene68029:intron | 35.0% |
!! | TCTTGATTATTTTGTGGCAC+AGG | + | chr5.3:12340678-12340697 | None:intergenic | 35.0% |
!! | TTGACATCTGCTTGTTGTAA+CGG | + | chr5.3:12343862-12343881 | None:intergenic | 35.0% |
!!! | GCAGAAAATAATTTTGGAGC+AGG | - | chr5.3:12340549-12340568 | MS.gene68029:intron | 35.0% |
AACAGCCTATTGCTCTCTTT+AGG | - | chr5.3:12343034-12343053 | MS.gene68029:intron | 40.0% | |
AACGAAATGCAAACACGAGT+TGG | - | chr5.3:12344094-12344113 | MS.gene68029:CDS | 40.0% | |
AAGAACATCACCACTTAAGC+TGG | - | chr5.3:12343525-12343544 | MS.gene68029:intron | 40.0% | |
AAGGTCACATACCTACAACT+TGG | + | chr5.3:12340869-12340888 | None:intergenic | 40.0% | |
ACGAAATGCAAACACGAGTT+GGG | - | chr5.3:12344095-12344114 | MS.gene68029:CDS | 40.0% | |
AGAACATCACCACTTAAGCT+GGG | - | chr5.3:12343526-12343545 | MS.gene68029:intron | 40.0% | |
AGGAATGAGTGAGTGCTAAT+CGG | + | chr5.3:12339537-12339556 | None:intergenic | 40.0% | |
AGGAGTCAAGTTTCTTCCAT+GGG | - | chr5.3:12341148-12341167 | MS.gene68029:intron | 40.0% | |
AGTTTCCGATGTGAACATGA+CGG | - | chr5.3:12338178-12338197 | MS.gene68029:CDS | 40.0% | |
ATGACAGCGAGAACTACTTT+CGG | + | chr5.3:12338230-12338249 | None:intergenic | 40.0% | |
ATGGTGTCTTGAATGGTGTT+GGG | - | chr5.3:12342612-12342631 | MS.gene68029:intron | 40.0% | |
ATTTAACCATATGCTCCCTC+CGG | + | chr5.3:12339055-12339074 | None:intergenic | 40.0% | |
CAATTGCTTGGATACCACAT+CGG | - | chr5.3:12343486-12343505 | MS.gene68029:intron | 40.0% | |
CAGATAGTGAAGACAACTCA+GGG | - | chr5.3:12343416-12343435 | MS.gene68029:intron | 40.0% | |
CATCTCCACTTATCTCTACA+GGG | - | chr5.3:12342783-12342802 | MS.gene68029:CDS | 40.0% | |
CTATGTTGCAGCTGTATAAG+TGG | - | chr5.3:12342888-12342907 | MS.gene68029:intron | 40.0% | |
CTGTAGTAACTCCAAGCTTT+GGG | - | chr5.3:12344169-12344188 | MS.gene68029:CDS | 40.0% | |
CTGTATAAGTGGAATGCAAG+TGG | - | chr5.3:12342899-12342918 | MS.gene68029:intron | 40.0% | |
CTTCATAACCTCACTGTTCT+CGG | + | chr5.3:12338255-12338274 | None:intergenic | 40.0% | |
CTTGAAAACAAACTCAGTGG+AGG | + | chr5.3:12342497-12342516 | None:intergenic | 40.0% | |
GAGGGTTTAGCGATTAAGAA+TGG | - | chr5.3:12338409-12338428 | MS.gene68029:CDS | 40.0% | |
GAGTCAGATGGCAATAAACA+AGG | - | chr5.3:12342459-12342478 | MS.gene68029:CDS | 40.0% | |
GATACTTCAACCCAGTCTAA+TGG | - | chr5.3:12343175-12343194 | MS.gene68029:intron | 40.0% | |
GATAGACGAGATTTCGAATC+AGG | - | chr5.3:12341065-12341084 | MS.gene68029:intron | 40.0% | |
GATCACTTCCGTATCTTGTT+TGG | + | chr5.3:12344200-12344219 | None:intergenic | 40.0% | |
GCTTTCAAAGAGATTGACTG+TGG | - | chr5.3:12341246-12341265 | MS.gene68029:CDS | 40.0% | |
GTACGTATTCTTTGTGCAAG+GGG | - | chr5.3:12339720-12339739 | MS.gene68029:CDS | 40.0% | |
GTTTGCTTCATTTGCTTCGA+CGG | - | chr5.3:12338353-12338372 | MS.gene68029:CDS | 40.0% | |
TAATTGTGCAGGTACAAGCA+AGG | - | chr5.3:12340960-12340979 | MS.gene68029:intron | 40.0% | |
TATGAGTCTGATGAAGATGC+TGG | - | chr5.3:12342435-12342454 | MS.gene68029:CDS | 40.0% | |
TCACACCAACAAATTAAGGG+AGG | - | chr5.3:12343294-12343313 | MS.gene68029:intron | 40.0% | |
TCAGATAGTGAAGACAACTC+AGG | - | chr5.3:12343415-12343434 | MS.gene68029:intron | 40.0% | |
TCATCTCCACTTATCTCTAC+AGG | - | chr5.3:12342782-12342801 | MS.gene68029:CDS | 40.0% | |
TCTGTAGTAACTCCAAGCTT+TGG | - | chr5.3:12344168-12344187 | MS.gene68029:CDS | 40.0% | |
TCTTCCGTTCAAAAGCCAAA+TGG | - | chr5.3:12338658-12338677 | MS.gene68029:CDS | 40.0% | |
TCTTCCTTCTTGATCTGCTT+CGG | + | chr5.3:12338326-12338345 | None:intergenic | 40.0% | |
TGATGCTGTTGCAAATGGAA+AGG | - | chr5.3:12340578-12340597 | MS.gene68029:intron | 40.0% | |
TGTAGTAACTCCAAGCTTTG+GGG | - | chr5.3:12344170-12344189 | MS.gene68029:CDS | 40.0% | |
TGTATTCTCAATTGGGTCAC+TGG | + | chr5.3:12342663-12342682 | None:intergenic | 40.0% | |
TTAAGCGTGCAATTTGGTCA+AGG | + | chr5.3:12342312-12342331 | None:intergenic | 40.0% | |
TTGTCCTAAAGCGTATCATC+CGG | - | chr5.3:12338611-12338630 | MS.gene68029:CDS | 40.0% | |
TTGTTTGGAAAAGCTCGTCT+TGG | - | chr5.3:12340468-12340487 | MS.gene68029:intron | 40.0% | |
TTTAGGAGCCAATGTTGCAT+TGG | - | chr5.3:12343051-12343070 | MS.gene68029:intron | 40.0% | |
! | AAAGTGGGTACTGTAGGAAA+GGG | - | chr5.3:12344379-12344398 | MS.gene68029:CDS | 40.0% |
! | ATTTGGGATGGTGTCTTGAA+TGG | - | chr5.3:12342605-12342624 | MS.gene68029:intron | 40.0% |
! | CTTTTACCTGCATCAAGCAT+TGG | + | chr5.3:12343778-12343797 | None:intergenic | 40.0% |
! | TAGAAGTGTGTACATGTGAC+TGG | + | chr5.3:12343237-12343256 | None:intergenic | 40.0% |
! | TTCAGATCTTTTGGCAGAAG+TGG | - | chr5.3:12343642-12343661 | MS.gene68029:intron | 40.0% |
!! | ATCCTCCATACTTTGAGATC+TGG | + | chr5.3:12342935-12342954 | None:intergenic | 40.0% |
!! | CAAAGTACCGCAATTCCATT+TGG | + | chr5.3:12338676-12338695 | None:intergenic | 40.0% |
!! | TCCATACTTTGAGATCTGGA+GGG | + | chr5.3:12342931-12342950 | None:intergenic | 40.0% |
!!! | AGGTTGTTGGTTCTTTTGTG+CGG | - | chr5.3:12340796-12340815 | MS.gene68029:intron | 40.0% |
!!! | GCGGATTTTGTTTCTGTTAG+AGG | - | chr5.3:12339755-12339774 | MS.gene68029:CDS | 40.0% |
!!! | TCAATGGGTTTTTAGCTCGA+AGG | + | chr5.3:12340107-12340126 | None:intergenic | 40.0% |
AAAGAAAGCAGTCAGGATGG+TGG | - | chr5.3:12343079-12343098 | MS.gene68029:intron | 45.0% | |
AAGAAAGCAGTCAGGATGGT+GGG | - | chr5.3:12343080-12343099 | MS.gene68029:intron | 45.0% | |
AATAGGCTGTTGTTCCGCAA+TGG | + | chr5.3:12343025-12343044 | None:intergenic | 45.0% | |
AATCCGTTAGGAGCAATGGA+TGG | - | chr5.3:12343206-12343225 | MS.gene68029:intron | 45.0% | |
ACAATCAAAGCCGGAAACAC+CGG | - | chr5.3:12338064-12338083 | MS.gene68029:CDS | 45.0% | |
ACTACGTGGCAGGCTATTAT+AGG | - | chr5.3:12343592-12343611 | MS.gene68029:intron | 45.0% | |
AGACAACTCAGGGCAATCTT+CGG | - | chr5.3:12343426-12343445 | MS.gene68029:intron | 45.0% | |
AGGAGTTCTCCGAGGTAAAT+AGG | - | chr5.3:12341085-12341104 | MS.gene68029:intron | 45.0% | |
AGGATTCACGAGAAGGTTGT+TGG | - | chr5.3:12340783-12340802 | MS.gene68029:intron | 45.0% | |
AGGGAACCAGGTTTAGTTAG+AGG | - | chr5.3:12344261-12344280 | MS.gene68029:CDS | 45.0% | |
ATAGTAACACCCACGCATCT+AGG | + | chr5.3:12341956-12341975 | None:intergenic | 45.0% | |
ATCAAGTTCCCCTTCAGTCT+TGG | + | chr5.3:12339926-12339945 | None:intergenic | 45.0% | |
ATCTCAATCTACAGCAGCAG+AGG | - | chr5.3:12343834-12343853 | MS.gene68029:CDS | 45.0% | |
ATGCCATCCATTGCTCCTAA+CGG | + | chr5.3:12343212-12343231 | None:intergenic | 45.0% | |
ATTTCGATGACAAGAGCAGC+TGG | - | chr5.3:12340016-12340035 | MS.gene68029:CDS | 45.0% | |
CAAGACACCATCCCAAATTC+TGG | + | chr5.3:12342603-12342622 | None:intergenic | 45.0% | |
CATACTCCAGCAAGAGATTC+TGG | + | chr5.3:12340380-12340399 | None:intergenic | 45.0% | |
CATGACTCAAACAGGACTTC+TGG | - | chr5.3:12343355-12343374 | MS.gene68029:intron | 45.0% | |
CATGTGTACCAAGACTGAAG+GGG | - | chr5.3:12339915-12339934 | MS.gene68029:intron | 45.0% | |
CCATGTGTACCAAGACTGAA+GGG | - | chr5.3:12339914-12339933 | MS.gene68029:intron | 45.0% | |
CCATTACCAACACCAAATGG+CGG | + | chr5.3:12344309-12344328 | None:intergenic | 45.0% | |
CCTCCATTACCAACACCAAA+TGG | + | chr5.3:12344312-12344331 | None:intergenic | 45.0% | |
CGAAATGCAAACACGAGTTG+GGG | - | chr5.3:12344096-12344115 | MS.gene68029:CDS | 45.0% | |
CGATGTGGTATCCAAGCAAT+TGG | + | chr5.3:12343488-12343507 | None:intergenic | 45.0% | |
CGTAGTGAGGAATTGACTGA+TGG | - | chr5.3:12343715-12343734 | MS.gene68029:intron | 45.0% | |
CTATCGATATGACCTCCTTC+CGG | + | chr5.3:12341050-12341069 | None:intergenic | 45.0% | |
CTCCAGATCTCAAAGTATGG+AGG | - | chr5.3:12342930-12342949 | MS.gene68029:intron | 45.0% | |
CTTAGTCCAATGCTTGATGC+AGG | - | chr5.3:12343769-12343788 | MS.gene68029:intron | 45.0% | |
CTTGCATTCATCCTGGACAT+AGG | + | chr5.3:12341200-12341219 | None:intergenic | 45.0% | |
GACAAAGAAAGCAGTCAGGA+TGG | - | chr5.3:12343076-12343095 | MS.gene68029:intron | 45.0% | |
GAGGAGTCAAGTTTCTTCCA+TGG | - | chr5.3:12341147-12341166 | MS.gene68029:intron | 45.0% | |
GAGGTTATGAAGAAGAAGCG+CGG | - | chr5.3:12338263-12338282 | MS.gene68029:CDS | 45.0% | |
GATGAATCCGTTAGGAGCAA+TGG | - | chr5.3:12343202-12343221 | MS.gene68029:intron | 45.0% | |
GATGGTGTCTTGAATGGTGT+TGG | - | chr5.3:12342611-12342630 | MS.gene68029:intron | 45.0% | |
GCAATCCCTGTAGAGATAAG+TGG | + | chr5.3:12342791-12342810 | None:intergenic | 45.0% | |
GGATGACAAAGAAAGCAGTC+AGG | - | chr5.3:12343072-12343091 | MS.gene68029:intron | 45.0% | |
GGCATTATCAGGATCCATCT+GGG | - | chr5.3:12342846-12342865 | MS.gene68029:intron | 45.0% | |
GGGGATAGCCAAACAAGATA+CGG | - | chr5.3:12344189-12344208 | MS.gene68029:CDS | 45.0% | |
GTGCGGATAAGAATCTCTAG+TGG | - | chr5.3:12340813-12340832 | MS.gene68029:intron | 45.0% | |
GTGGGTATGTGCATGTTAGT+TGG | - | chr5.3:12342249-12342268 | MS.gene68029:CDS | 45.0% | |
TAGTTGCATTGCATGCTGGA+GGG | + | chr5.3:12343576-12343595 | None:intergenic | 45.0% | |
TCCATGTGTACCAAGACTGA+AGG | - | chr5.3:12339913-12339932 | MS.gene68029:intron | 45.0% | |
TCCCTCCAGATCTCAAAGTA+TGG | - | chr5.3:12342927-12342946 | MS.gene68029:intron | 45.0% | |
TCTCTCCGTCATGTTCACAT+CGG | + | chr5.3:12338186-12338205 | None:intergenic | 45.0% | |
TCTGGTGGTCAGAGTAATAG+TGG | - | chr5.3:12343373-12343392 | MS.gene68029:intron | 45.0% | |
TGATCATCTGCAAACTCCCA+TGG | + | chr5.3:12341167-12341186 | None:intergenic | 45.0% | |
TGATGTCCAGAATCTCTTGC+TGG | - | chr5.3:12340371-12340390 | MS.gene68029:intron | 45.0% | |
TGCCCAGGGAAATAAGGAAA+TGG | - | chr5.3:12339832-12339851 | MS.gene68029:CDS | 45.0% | |
TGCTGTTGCAAATGGAAAGG+AGG | - | chr5.3:12340581-12340600 | MS.gene68029:intron | 45.0% | |
TGGCATTATCAGGATCCATC+TGG | - | chr5.3:12342845-12342864 | MS.gene68029:intron | 45.0% | |
TGGCTCCTAAAGAGAGCAAT+AGG | + | chr5.3:12343042-12343061 | None:intergenic | 45.0% | |
TGTACACTCTGACCCCAATT+TGG | - | chr5.3:12342404-12342423 | MS.gene68029:CDS | 45.0% | |
TTACAAACTCGCTGCCCTTT+GGG | + | chr5.3:12344351-12344370 | None:intergenic | 45.0% | |
TTATCAGGATCCATCTGGGA+AGG | - | chr5.3:12342850-12342869 | MS.gene68029:intron | 45.0% | |
TTCCAATCCAAGTCTCCAAG+TGG | + | chr5.3:12344043-12344062 | None:intergenic | 45.0% | |
TTGCACGCTTAAAGAATGCG+TGG | - | chr5.3:12342320-12342339 | MS.gene68029:CDS | 45.0% | |
TTGTGGGAAGTTTGACCCAT+AGG | + | chr5.3:12340141-12340160 | None:intergenic | 45.0% | |
TTTACAAACTCGCTGCCCTT+TGG | + | chr5.3:12344352-12344371 | None:intergenic | 45.0% | |
TTTCCAGCCACTGCAACATT+GGG | - | chr5.3:12344003-12344022 | MS.gene68029:intron | 45.0% | |
TTTCGATGACAAGAGCAGCT+GGG | - | chr5.3:12340017-12340036 | MS.gene68029:CDS | 45.0% | |
TTTGCCTGAGTGCAAGAGAT+GGG | - | chr5.3:12340281-12340300 | MS.gene68029:intron | 45.0% | |
! | AAGTGGGTACTGTAGGAAAG+GGG | - | chr5.3:12344380-12344399 | MS.gene68029:CDS | 45.0% |
! | ACGGTGATATAAGCACTGTC+AGG | + | chr5.3:12342537-12342556 | None:intergenic | 45.0% |
! | ACTTTCTTTTTGCGCTGCTC+AGG | - | chr5.3:12339644-12339663 | MS.gene68029:CDS | 45.0% |
! | AGATCTTTTGGCAGAAGTGG+AGG | - | chr5.3:12343645-12343664 | MS.gene68029:intron | 45.0% |
! | ATTTTCTGTGCCCAGAGATC+GGG | - | chr5.3:12344221-12344240 | MS.gene68029:CDS | 45.0% |
! | GAAAGTACACACCTGGAATG+GGG | - | chr5.3:12344060-12344079 | MS.gene68029:intron | 45.0% |
! | GAAAGTGGGTACTGTAGGAA+AGG | - | chr5.3:12344378-12344397 | MS.gene68029:CDS | 45.0% |
! | GATTTTCTGTGCCCAGAGAT+CGG | - | chr5.3:12344220-12344239 | MS.gene68029:CDS | 45.0% |
! | GCTCCAAAAATGTGCCATTG+CGG | - | chr5.3:12343008-12343027 | MS.gene68029:intron | 45.0% |
! | GGAAAGTACACACCTGGAAT+GGG | - | chr5.3:12344059-12344078 | MS.gene68029:intron | 45.0% |
! | GTTCCGCAATGGCACATTTT+TGG | + | chr5.3:12343014-12343033 | None:intergenic | 45.0% |
! | TGGAAAGTACACACCTGGAA+TGG | - | chr5.3:12344058-12344077 | MS.gene68029:intron | 45.0% |
! | TGGATTGGAAAGTACACACC+TGG | - | chr5.3:12344053-12344072 | MS.gene68029:intron | 45.0% |
! | TGGTGTCTTGAATGGTGTTG+GGG | - | chr5.3:12342613-12342632 | MS.gene68029:intron | 45.0% |
! | TTTTCCAGCCACTGCAACAT+TGG | - | chr5.3:12344002-12344021 | MS.gene68029:intron | 45.0% |
!! | AGAAGTGTCTAGTGTTGCAG+TGG | - | chr5.3:12342754-12342773 | MS.gene68029:CDS | 45.0% |
!! | CCATTTGGTGTTGGTAATGG+AGG | - | chr5.3:12344309-12344328 | MS.gene68029:CDS | 45.0% |
!! | CTCCATACTTTGAGATCTGG+AGG | + | chr5.3:12342932-12342951 | None:intergenic | 45.0% |
!! | TCATGGGTGGAAGTATTCAC+AGG | + | chr5.3:12344409-12344428 | None:intergenic | 45.0% |
!! | TGCGTGGGTGTTACTATCAT+AGG | - | chr5.3:12341959-12341978 | MS.gene68029:CDS | 45.0% |
!!! | CAGCTGGGAGTATCTTTTCA+AGG | - | chr5.3:12340032-12340051 | MS.gene68029:CDS | 45.0% |
!!! | GCTACTTTTACAGTGTGACG+TGG | - | chr5.3:12339993-12340012 | MS.gene68029:intron | 45.0% |
!!! | TAAATTTTAATAGTTTATTT+TGG | - | chr5.3:12339589-12339608 | MS.gene68029:CDS | 5.0% |
!!! | TTAAAATTTAAAACAAATAT+AGG | + | chr5.3:12339579-12339598 | None:intergenic | 5.0% |
AAGAAGCCTAAGGGACCTTC+AGG | - | chr5.3:12340240-12340259 | MS.gene68029:intron | 50.0% | |
ACATCGGAAACTGCCTTCGT+CGG | + | chr5.3:12338170-12338189 | None:intergenic | 50.0% | |
ACTTTCGGAGTTCCTTTCGC+TGG | + | chr5.3:12338293-12338312 | None:intergenic | 50.0% | |
AGTCATGCCCAATGTTGCAG+TGG | + | chr5.3:12344013-12344032 | None:intergenic | 50.0% | |
AGTTGCATTGCATGCTGGAG+GGG | + | chr5.3:12343575-12343594 | None:intergenic | 50.0% | |
ATAGGAGCAGCAGCACTCAA+TGG | + | chr5.3:12340123-12340142 | None:intergenic | 50.0% | |
ATCGCTAAACCCTCACTCAC+CGG | + | chr5.3:12338403-12338422 | None:intergenic | 50.0% | |
ATGCAATGCAACTACGTGGC+AGG | - | chr5.3:12343582-12343601 | MS.gene68029:intron | 50.0% | |
ATTAGCAGTGCCTAGATGCG+TGG | - | chr5.3:12341943-12341962 | MS.gene68029:CDS | 50.0% | |
CACCACTTGGAGACTTGGAT+TGG | - | chr5.3:12344038-12344057 | MS.gene68029:intron | 50.0% | |
CACGTAGTTGCATTGCATGC+TGG | + | chr5.3:12343580-12343599 | None:intergenic | 50.0% | |
CAGCATGCAATGCAACTACG+TGG | - | chr5.3:12343578-12343597 | MS.gene68029:intron | 50.0% | |
CCCTTCAGTCTTGGTACACA+TGG | + | chr5.3:12339917-12339936 | None:intergenic | 50.0% | |
CGGGATAGAGCAAGTGAGAA+GGG | - | chr5.3:12341759-12341778 | MS.gene68029:CDS | 50.0% | |
CGTATAGACCTCTGCCCAAA+GGG | - | chr5.3:12344334-12344353 | MS.gene68029:CDS | 50.0% | |
CTCAGAAACATGAGCCGATG+TGG | + | chr5.3:12343503-12343522 | None:intergenic | 50.0% | |
CTGATTGAGAACAGTGCCCA+GGG | - | chr5.3:12339818-12339837 | MS.gene68029:CDS | 50.0% | |
CTTTGCCTGAGTGCAAGAGA+TGG | - | chr5.3:12340280-12340299 | MS.gene68029:intron | 50.0% | |
GAACAGTGCCCAGGGAAATA+AGG | - | chr5.3:12339826-12339845 | MS.gene68029:CDS | 50.0% | |
GAAGATGCTGGAGAGTCAGA+TGG | - | chr5.3:12342447-12342466 | MS.gene68029:CDS | 50.0% | |
GACTCAAACAGGACTTCTGG+TGG | - | chr5.3:12343358-12343377 | MS.gene68029:intron | 50.0% | |
GACTGTTGAAGTTCCGACGA+AGG | - | chr5.3:12338154-12338173 | MS.gene68029:CDS | 50.0% | |
GATCCATCTGGGAAGGTTCA+AGG | - | chr5.3:12342857-12342876 | MS.gene68029:intron | 50.0% | |
GCAATCGCTTGCATTCATCC+TGG | + | chr5.3:12341207-12341226 | None:intergenic | 50.0% | |
GCATGACTGTAGACACCACT+TGG | - | chr5.3:12344025-12344044 | MS.gene68029:intron | 50.0% | |
GCTCTGCCTCTAACTAAACC+TGG | + | chr5.3:12344270-12344289 | None:intergenic | 50.0% | |
GTAGACACCACTTGGAGACT+TGG | - | chr5.3:12344033-12344052 | MS.gene68029:intron | 50.0% | |
GTAGTTGCATTGCATGCTGG+AGG | + | chr5.3:12343577-12343596 | None:intergenic | 50.0% | |
GTGCAAGAGATGGGCATCAA+AGG | - | chr5.3:12340290-12340309 | MS.gene68029:intron | 50.0% | |
GTTTGGCTATCCCCAAAGCT+TGG | + | chr5.3:12344183-12344202 | None:intergenic | 50.0% | |
TAGGAGCAGCAGCACTCAAT+GGG | + | chr5.3:12340122-12340141 | None:intergenic | 50.0% | |
TCAAGTAACCAGTGGGAGTC+AGG | - | chr5.3:12343961-12343980 | MS.gene68029:intron | 50.0% | |
TCCTTCTTGATCTGCTTCGG+CGG | + | chr5.3:12338323-12338342 | None:intergenic | 50.0% | |
TCGGGATAGAGCAAGTGAGA+AGG | - | chr5.3:12341758-12341777 | MS.gene68029:CDS | 50.0% | |
TCGTATAGACCTCTGCCCAA+AGG | - | chr5.3:12344333-12344352 | MS.gene68029:CDS | 50.0% | |
TGCTTCATTTGCTTCGACGG+TGG | - | chr5.3:12338356-12338375 | MS.gene68029:CDS | 50.0% | |
TTAGCAGTGCCTAGATGCGT+GGG | - | chr5.3:12341944-12341963 | MS.gene68029:CDS | 50.0% | |
TTCGAATCAGGAGTTCTCCG+AGG | - | chr5.3:12341077-12341096 | MS.gene68029:intron | 50.0% | |
TTGGGGTCAGAGTGTACATC+TGG | + | chr5.3:12342402-12342421 | None:intergenic | 50.0% | |
TTTGGCAGAAGTGGAGGCAA+TGG | - | chr5.3:12343651-12343670 | MS.gene68029:intron | 50.0% | |
! | AATGGAATCGCTTGGTGGCT+TGG | - | chr5.3:12343669-12343688 | MS.gene68029:intron | 50.0% |
! | ACGCATCTAGGCACTGCTAA+TGG | + | chr5.3:12341944-12341963 | None:intergenic | 50.0% |
! | ATGGTGTTGGGGGAAGAACA+CGG | - | chr5.3:12342624-12342643 | MS.gene68029:intron | 50.0% |
! | ATTGAGTGCTGCTGCTCCTA+TGG | - | chr5.3:12340122-12340141 | MS.gene68029:CDS | 50.0% |
! | GACTGTAACGGAGACAGTTC+CGG | - | chr5.3:12338088-12338107 | MS.gene68029:CDS | 50.0% |
! | GGGTTTTCCTGGTCATGGTA+GGG | - | chr5.3:12344242-12344261 | MS.gene68029:CDS | 50.0% |
! | GGTGTCTTGAATGGTGTTGG+GGG | - | chr5.3:12342614-12342633 | MS.gene68029:intron | 50.0% |
! | GTGAACATGACGGAGAGAGA+CGG | - | chr5.3:12338188-12338207 | MS.gene68029:CDS | 50.0% |
! | TAATGACCGGAGGGAGCATA+TGG | - | chr5.3:12339046-12339065 | MS.gene68029:CDS | 50.0% |
! | TCTTTTTGCGCTGCTCAGGT+TGG | - | chr5.3:12339648-12339667 | MS.gene68029:CDS | 50.0% |
! | TTGAGTGCTGCTGCTCCTAT+GGG | - | chr5.3:12340123-12340142 | MS.gene68029:CDS | 50.0% |
! | TTTTCTGTGCCCAGAGATCG+GGG | - | chr5.3:12344222-12344241 | MS.gene68029:CDS | 50.0% |
!! | CCGCCATTTGGTGTTGGTAA+TGG | - | chr5.3:12344306-12344325 | MS.gene68029:CDS | 50.0% |
AAGCCTAAGGGACCTTCAGG+CGG | - | chr5.3:12340243-12340262 | MS.gene68029:intron | 55.0% | |
ACACCTGGAATGGGGAGGAA+TGG | - | chr5.3:12344068-12344087 | MS.gene68029:intron | 55.0% | |
ACCAGGAAAACCCCGATCTC+TGG | + | chr5.3:12344235-12344254 | None:intergenic | 55.0% | |
ACTGTCTCCGTTACAGTCGC+CGG | + | chr5.3:12338086-12338105 | None:intergenic | 55.0% | |
AGTACACACCTGGAATGGGG+AGG | - | chr5.3:12344063-12344082 | MS.gene68029:intron | 55.0% | |
ATGCCCAATGTTGCAGTGGC+TGG | + | chr5.3:12344009-12344028 | None:intergenic | 55.0% | |
ATTGCATGCTGGAGGGGAAG+GGG | + | chr5.3:12343569-12343588 | None:intergenic | 55.0% | |
CACGCCGGATGATACGCTTT+AGG | + | chr5.3:12338618-12338637 | None:intergenic | 55.0% | |
CATTGCATGCTGGAGGGGAA+GGG | + | chr5.3:12343570-12343589 | None:intergenic | 55.0% | |
CCAGGAAAACCCCGATCTCT+GGG | + | chr5.3:12344234-12344253 | None:intergenic | 55.0% | |
CTACTTGCGGCGAAGTCTGA+TGG | - | chr5.3:12340737-12340756 | MS.gene68029:CDS | 55.0% | |
CTCAATTGGGTCACTGGCAG+TGG | + | chr5.3:12342657-12342676 | None:intergenic | 55.0% | |
GACTGTTCCGGTTGCCGTTA+CGG | - | chr5.3:12338112-12338131 | MS.gene68029:CDS | 55.0% | |
GAGAGACGGCGGTTGTTGTA+CGG | - | chr5.3:12338202-12338221 | MS.gene68029:CDS | 55.0% | |
GAGGCAATGGAATCGCTTGG+TGG | - | chr5.3:12343664-12343683 | MS.gene68029:intron | 55.0% | |
GAGTTGGGGAGTAGGACATG+CGG | - | chr5.3:12344110-12344129 | MS.gene68029:CDS | 55.0% | |
GATCCATTCCTCCCCATTCC+AGG | + | chr5.3:12344074-12344093 | None:intergenic | 55.0% | |
GATGCCCATCTCTTGCACTC+AGG | + | chr5.3:12340288-12340307 | None:intergenic | 55.0% | |
GCTGATTGAGAACAGTGCCC+AGG | - | chr5.3:12339817-12339836 | MS.gene68029:CDS | 55.0% | |
GGAAACACCGGCGACTGTAA+CGG | - | chr5.3:12338076-12338095 | MS.gene68029:CDS | 55.0% | |
GGCAATCTTCGGCACAAAGC+TGG | - | chr5.3:12343437-12343456 | MS.gene68029:intron | 55.0% | |
GGTCCTTGAACCTTCCCAGA+TGG | + | chr5.3:12342863-12342882 | None:intergenic | 55.0% | |
GTGGAGGCAATGGAATCGCT+TGG | - | chr5.3:12343661-12343680 | MS.gene68029:intron | 55.0% | |
GTTACAGTCGCCGGTGTTTC+CGG | + | chr5.3:12338077-12338096 | None:intergenic | 55.0% | |
TAACCAGTGGGAGTCAGGCT+CGG | - | chr5.3:12343966-12343985 | MS.gene68029:intron | 55.0% | |
TAGTTAGAGGCAGAGCTGCG+TGG | - | chr5.3:12344274-12344293 | MS.gene68029:CDS | 55.0% | |
TCCGCCGAAGCAGATCAAGA+AGG | - | chr5.3:12338319-12338338 | MS.gene68029:CDS | 55.0% | |
TGGAACAGGCAACCGCCATT+TGG | - | chr5.3:12344294-12344313 | MS.gene68029:CDS | 55.0% | |
TGTCATCGCCGAGAACAGTG+AGG | - | chr5.3:12338244-12338263 | MS.gene68029:CDS | 55.0% | |
TTCTTGATCTGCTTCGGCGG+AGG | + | chr5.3:12338320-12338339 | None:intergenic | 55.0% | |
! | AACATGACGGAGAGAGACGG+CGG | - | chr5.3:12338191-12338210 | MS.gene68029:CDS | 55.0% |
! | GATCGGGGTTTTCCTGGTCA+TGG | - | chr5.3:12344237-12344256 | MS.gene68029:CDS | 55.0% |
! | GCAAACACGAGTTGGGGAGT+AGG | - | chr5.3:12344102-12344121 | MS.gene68029:CDS | 55.0% |
! | GGGGTTTTCCTGGTCATGGT+AGG | - | chr5.3:12344241-12344260 | MS.gene68029:CDS | 55.0% |
! | TGGTGTTGGGGGAAGAACAC+GGG | - | chr5.3:12342625-12342644 | MS.gene68029:intron | 55.0% |
! | TTCGGCGGAGGAGCTACTTT+CGG | + | chr5.3:12338308-12338327 | None:intergenic | 55.0% |
!! | AAAGCAGTCAGGATGGTGGG+AGG | - | chr5.3:12343083-12343102 | MS.gene68029:intron | 55.0% |
!! | AGGCAACCGCCATTTGGTGT+TGG | - | chr5.3:12344300-12344319 | MS.gene68029:CDS | 55.0% |
AACAGTCTTCGTCTCCGCCG+CGG | + | chr5.3:12338141-12338160 | None:intergenic | 60.0% | |
CCTGGTCATGGTAGGGAACC+AGG | - | chr5.3:12344249-12344268 | MS.gene68029:CDS | 60.0% | |
CCTGGTTCCCTACCATGACC+AGG | + | chr5.3:12344252-12344271 | None:intergenic | 60.0% | |
GACAGTTCCGGCGACTGTTC+CGG | - | chr5.3:12338100-12338119 | MS.gene68029:CDS | 60.0% | |
GCATTGCATGCTGGAGGGGA+AGG | + | chr5.3:12343571-12343590 | None:intergenic | 60.0% | |
GTCTCGTTCTCTGCGATCGC+CGG | - | chr5.3:12338381-12338400 | MS.gene68029:CDS | 60.0% | |
TCACCGCCTGAAGGTCCCTT+AGG | + | chr5.3:12340249-12340268 | None:intergenic | 60.0% | |
TCGTCTCGCTTGACACACGC+CGG | + | chr5.3:12338633-12338652 | None:intergenic | 60.0% | |
TTGCATGCTGGAGGGGAAGG+GGG | + | chr5.3:12343568-12343587 | None:intergenic | 60.0% | |
TTTCCGAGCCTGACTCCCAC+TGG | + | chr5.3:12343972-12343991 | None:intergenic | 60.0% | |
! | CCCAGAGATCGGGGTTTTCC+TGG | - | chr5.3:12344231-12344250 | MS.gene68029:CDS | 60.0% |
AAGCGCGGTCGTCCAGCGAA+AGG | - | chr5.3:12338278-12338297 | MS.gene68029:CDS | 65.0% | |
ACACCCGTGTCACCGCCTGA+AGG | + | chr5.3:12340258-12340277 | None:intergenic | 65.0% | |
ACGGCAACCGGAACAGTCGC+CGG | + | chr5.3:12338110-12338129 | None:intergenic | 65.0% | |
ACTCGCTGCCCTTTGGGCAG+AGG | + | chr5.3:12344345-12344364 | None:intergenic | 65.0% | |
ATGCTGGAGGGGAAGGGGGT+TGG | + | chr5.3:12343564-12343583 | None:intergenic | 65.0% | |
CTGCGATCGCCGGTGAGTGA+GGG | - | chr5.3:12338391-12338410 | MS.gene68029:CDS | 65.0% | |
GAGGCAGAGCTGCGTGGAAC+AGG | - | chr5.3:12344280-12344299 | MS.gene68029:CDS | 65.0% | |
GCGGTCTCCGTAACGGCAAC+CGG | + | chr5.3:12338122-12338141 | None:intergenic | 65.0% | |
GGACCTTCAGGCGGTGACAC+GGG | - | chr5.3:12340252-12340271 | MS.gene68029:intron | 65.0% | |
GGGACCTTCAGGCGGTGACA+CGG | - | chr5.3:12340251-12340270 | MS.gene68029:intron | 65.0% | |
GGTTGCCGTTACGGAGACCG+CGG | - | chr5.3:12338121-12338140 | MS.gene68029:CDS | 65.0% | |
TCTGCGATCGCCGGTGAGTG+AGG | - | chr5.3:12338390-12338409 | MS.gene68029:CDS | 65.0% | |
CTCCGCCGCGGTCTCCGTAA+CGG | + | chr5.3:12338129-12338148 | None:intergenic | 70.0% | |
TGCCGTTACGGAGACCGCGG+CGG | - | chr5.3:12338124-12338143 | MS.gene68029:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 12338059 | 12344428 | 12338059 | ID=MS.gene68029 |
chr5.3 | mRNA | 12338059 | 12344428 | 12338059 | ID=MS.gene68029.t1;Parent=MS.gene68029 |
chr5.3 | exon | 12344085 | 12344428 | 12344085 | ID=MS.gene68029.t1.exon1;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12344085 | 12344428 | 12344085 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12343800 | 12343879 | 12343800 | ID=MS.gene68029.t1.exon2;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12343800 | 12343879 | 12343800 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12342634 | 12342821 | 12342634 | ID=MS.gene68029.t1.exon3;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12342634 | 12342821 | 12342634 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12341611 | 12342481 | 12341611 | ID=MS.gene68029.t1.exon4;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12341611 | 12342481 | 12341611 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12341389 | 12341516 | 12341389 | ID=MS.gene68029.t1.exon5;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12341389 | 12341516 | 12341389 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12341220 | 12341279 | 12341220 | ID=MS.gene68029.t1.exon6;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12341220 | 12341279 | 12341220 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12341089 | 12341139 | 12341089 | ID=MS.gene68029.t1.exon7;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12341089 | 12341139 | 12341089 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12340716 | 12340764 | 12340716 | ID=MS.gene68029.t1.exon8;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12340716 | 12340764 | 12340716 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12340007 | 12340153 | 12340007 | ID=MS.gene68029.t1.exon9;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12340007 | 12340153 | 12340007 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
chr5.3 | exon | 12338059 | 12339908 | 12338059 | ID=MS.gene68029.t1.exon10;Parent=MS.gene68029.t1 |
chr5.3 | CDS | 12338059 | 12339908 | 12338059 | ID=cds.MS.gene68029.t1;Parent=MS.gene68029.t1 |
Gene Sequence |
Protein sequence |